Metagenome / Metatranscriptome Family F074708

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	52 residues
Representative Sequence	RQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRALLIEAAGD
Number of Associated Samples	105
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.72 %
% of genes near scaffold ends (potentially truncated)	94.96 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.235 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.933 % of family members)
Environment Ontology (ENVO)	Unclassified (26.050 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.261 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.66% β-sheet: 0.00% Coil/Unstructured: 62.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13473	Cupredoxin_1	6.72
PF00009	GTP_EFTU	5.88
PF07883	Cupin_2	5.04
PF12098	DUF3574	3.36
PF04909	Amidohydro_2	3.36
PF00496	SBP_bac_5	2.52
PF13561	adh_short_C2	2.52
PF06904	Extensin-like_C	2.52
PF08028	Acyl-CoA_dh_2	2.52
PF01546	Peptidase_M20	2.52
PF09821	AAA_assoc_C	2.52
PF01568	Molydop_binding	2.52
PF03928	HbpS-like	1.68
PF03807	F420_oxidored	1.68
PF00072	Response_reg	1.68
PF03466	LysR_substrate	0.84
PF01663	Phosphodiest	0.84
PF07927	HicA_toxin	0.84
PF00857	Isochorismatase	0.84
PF00329	Complex1_30kDa	0.84
PF13599	Pentapeptide_4	0.84
PF13649	Methyltransf_25	0.84
PF04241	DUF423	0.84
PF08883	DOPA_dioxygen	0.84
PF01381	HTH_3	0.84
PF03239	FTR1	0.84
PF04964	Flp_Fap	0.84
PF07171	MlrC_C	0.84
PF00528	BPD_transp_1	0.84
PF00589	Phage_integrase	0.84
PF08450	SGL	0.84
PF04480	DUF559	0.84
PF00535	Glycos_transf_2	0.84
PF01384	PHO4	0.84
PF03795	YCII	0.84
PF01541	GIY-YIG	0.84
PF04255	DUF433	0.84
PF14805	THDPS_N_2	0.84
PF00106	adh_short	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.52
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	2.52
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.84
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.84
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.84
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.84
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG2363	Uncharacterized membrane protein YgdD, TMEM256/DUF423 family	Function unknown [S]	0.84
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.84
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.84
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.84
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.84
COG3805	Aromatic ring-cleaving dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.84
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.87 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.54 %
Unclassified	root	N/A	11.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	25.21 %
Unclassified	root	N/A	11.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.36 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.21 %
Unclassified	root	N/A	11.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.68 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.21 %
Unclassified	root	N/A	11.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.68 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.21 %
Unclassified	root	N/A	11.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.68 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Brevundimonas bullata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas bullata	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_117700004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	500	Open in IMG/M
3300003505\|JGIcombinedJ51221_10197283	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300004081\|Ga0063454_100220464	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300004081\|Ga0063454_101038338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	663	Open in IMG/M
3300004081\|Ga0063454_101736332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300004153\|Ga0063455_100168551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1035	Open in IMG/M
3300004156\|Ga0062589_102266657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300004463\|Ga0063356_104050467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300005435\|Ga0070714_100820083	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300005435\|Ga0070714_101221103	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005436\|Ga0070713_101495900	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005454\|Ga0066687_10255729	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005471\|Ga0070698_101268403	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300005526\|Ga0073909_10247923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300005534\|Ga0070735_10590252	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005542\|Ga0070732_10902215	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300005559\|Ga0066700_10563408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	795	Open in IMG/M
3300005587\|Ga0066654_10518156	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300005598\|Ga0066706_11193484	Not Available	578	Open in IMG/M
3300005764\|Ga0066903_101121046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300005764\|Ga0066903_106665854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005764\|Ga0066903_106820200	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006028\|Ga0070717_10067115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2984	Open in IMG/M
3300006046\|Ga0066652_100908828	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300006058\|Ga0075432_10472466	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300006755\|Ga0079222_12530688	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006804\|Ga0079221_10564721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	757	Open in IMG/M
3300006893\|Ga0073928_10392104	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300006914\|Ga0075436_101320135	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300007076\|Ga0075435_101320428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300007255\|Ga0099791_10504372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300009038\|Ga0099829_10400909	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009089\|Ga0099828_11921031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300009093\|Ga0105240_11536545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300009137\|Ga0066709_101684743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300009137\|Ga0066709_102304807	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300009143\|Ga0099792_10673716	Not Available	666	Open in IMG/M
3300009524\|Ga0116225_1467510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300010046\|Ga0126384_11749321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300010047\|Ga0126382_12046139	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_11200226	Not Available	825	Open in IMG/M
3300010166\|Ga0126306_11122312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300010325\|Ga0134064_10234362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300010358\|Ga0126370_11242166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300010359\|Ga0126376_12442815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300010376\|Ga0126381_101092139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300010398\|Ga0126383_11483453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300010398\|Ga0126383_13126939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300011120\|Ga0150983_15958670	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300012019\|Ga0120139_1176650	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012211\|Ga0137377_11725867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012361\|Ga0137360_10327165	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300012582\|Ga0137358_10314833	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300012917\|Ga0137395_10496277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300014501\|Ga0182024_10160582	All Organisms → cellular organisms → Bacteria → Proteobacteria	3139	Open in IMG/M
3300015372\|Ga0132256_101453423	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300016371\|Ga0182034_10415066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1107	Open in IMG/M
3300016404\|Ga0182037_11372819	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300017975\|Ga0187782_10286260	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300018482\|Ga0066669_10981052	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300019377\|Ga0190264_11057344	Not Available	656	Open in IMG/M
3300020582\|Ga0210395_10278236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300020583\|Ga0210401_10949687	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300021170\|Ga0210400_10136009	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300021178\|Ga0210408_10699879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas bullata	798	Open in IMG/M
3300021404\|Ga0210389_10301954	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300021405\|Ga0210387_11208079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300021406\|Ga0210386_10149885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1950	Open in IMG/M
3300021477\|Ga0210398_10630426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300021479\|Ga0210410_11327216	Not Available	612	Open in IMG/M
3300021560\|Ga0126371_11317704	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300021560\|Ga0126371_11684876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300022557\|Ga0212123_10496780	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300025915\|Ga0207693_10521961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300025929\|Ga0207664_10558781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300026075\|Ga0207708_11821755	Not Available	534	Open in IMG/M
3300026300\|Ga0209027_1092536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300026551\|Ga0209648_10700358	Not Available	553	Open in IMG/M
3300027076\|Ga0208860_1016156	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300027875\|Ga0209283_10985476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300028047\|Ga0209526_10070959	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300028047\|Ga0209526_10220309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300029636\|Ga0222749_10208428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300030625\|Ga0210259_11391576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300031549\|Ga0318571_10064851	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031561\|Ga0318528_10273700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	906	Open in IMG/M
3300031668\|Ga0318542_10319746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	796	Open in IMG/M
3300031670\|Ga0307374_10173071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1613	Open in IMG/M
3300031679\|Ga0318561_10352032	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300031680\|Ga0318574_10025472	All Organisms → cellular organisms → Bacteria → Proteobacteria	2936	Open in IMG/M
3300031708\|Ga0310686_112418665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031719\|Ga0306917_10334364	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300031724\|Ga0318500_10335666	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300031724\|Ga0318500_10574187	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031736\|Ga0318501_10146333	Not Available	1213	Open in IMG/M
3300031748\|Ga0318492_10132202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300031751\|Ga0318494_10427646	Not Available	769	Open in IMG/M
3300031770\|Ga0318521_10005118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5111	Open in IMG/M
3300031771\|Ga0318546_10165233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1499	Open in IMG/M
3300031795\|Ga0318557_10005063	All Organisms → cellular organisms → Bacteria → Proteobacteria	4508	Open in IMG/M
3300031880\|Ga0318544_10005865	Not Available	3696	Open in IMG/M
3300031880\|Ga0318544_10008354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3192	Open in IMG/M
3300031893\|Ga0318536_10276513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300031896\|Ga0318551_10038520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2361	Open in IMG/M
3300031897\|Ga0318520_10059668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2035	Open in IMG/M
3300031946\|Ga0310910_10171195	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300031996\|Ga0308176_11821358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300032025\|Ga0318507_10522155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300032043\|Ga0318556_10019042	All Organisms → cellular organisms → Bacteria → Proteobacteria	3041	Open in IMG/M
3300032055\|Ga0318575_10161473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300032064\|Ga0318510_10414452	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300032068\|Ga0318553_10324299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300032076\|Ga0306924_10649823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300032090\|Ga0318518_10018764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3018	Open in IMG/M
3300032091\|Ga0318577_10185506	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300032091\|Ga0318577_10199325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.44%
Plants	Host-Associated → Plants	5.88%
Aquatic	Environmental → Aquatic	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	18.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030625	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO122-ANR120SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1177000042	3300002568	Soil	ATVPTRVARQIAATASIAMTPLPIDFAATVSMAWHRRTASDPAQVWFRSLLVGAAADQDAGQEQAR*
C688J35102_1204946841	3300002568	Soil	EIEILPLPVDLIASVSMAWHRRSASEAAQAWFRSLLIDAAQDQG*
JGIcombinedJ51221_101972832	3300003505	Forest Soil	RVAELIAATARVAVTPLPIDFALTVSMAWHRRAATDPAQSWFRSLLIEAAAA*
Ga0063454_1002204643	3300004081	Soil	AAQIAATAAVAILPLPIDLEATVSMAWHRRAASEPAQVWFRQLLTEAAQDEA*
Ga0063454_1010383381	3300004081	Soil	VARHIAATPGIAIAPLPIDFSASVSMAWHRRTASDPAQSWFRALLVGAAGDGDDGQEAAGQERTA*
Ga0063454_1017363321	3300004081	Soil	SRTARQIAATAEIEILPLPVDLIASVSMAWHRRSASEAAQAWFRSLLIDAAQDQG*
Ga0063455_1001685512	3300004153	Soil	IAATAEIEMLPLPFDLSATMSMAWHRRAASEPAQAWFRSLLIDAAQDDA*
Ga0062589_1022666572	3300004156	Soil	RTARQIAAAAEIEILPLPIDLSTTVSMAWHRRATSEPAQVWFRQLLTAAAQDEA*
Ga0063356_1040504672	3300004463	Arabidopsis Thaliana Rhizosphere	LVAAVPSRAARQIAAVAEIAILPLPVDLAVTVSMAWHRRAASEPAQAWFRSLLIDAAKDDG*
Ga0070714_1008200831	3300005435	Agricultural Soil	AAIAEIEIMPLAIDLSVLVSMAWHRRAASEPAQIWFRSLLIEAAQD*
Ga0070714_1012211031	3300005435	Agricultural Soil	AAIAEIEIMPLAIDLSVLVSMAWHRRAASEPAQIWFRSLLIDAARD*
Ga0070713_1014959002	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWLRALLIAAARD*
Ga0066687_102557291	3300005454	Soil	IAAAAEIEILPLPVDLSTTVSMAWHRRAASEPAQVWFRQLLTEAAQDEA*
Ga0070698_1012684033	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPSRTARQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRSLLIAAAKD*
Ga0073909_102479231	3300005526	Surface Soil	TMPERTARQIAATAEVAIMPLPIDFSATVSMAWHRRTASDPAQAWFRALLIDAASE*
Ga0070735_105902521	3300005534	Surface Soil	LIAAHAEIAILPLPIDFAATVSMAWHRRAASEPAQAWFRGLLTEAAG*
Ga0070732_109022152	3300005542	Surface Soil	QIAASAELQIMPLPLDLSATVSLAWHRRTASEPAQTWFRALLIDAAGDGG*
Ga0066700_105634082	3300005559	Soil	TARQIAATAEIEILPLPIDLSMTVSMAWHRRAASEPAQAWFRALLLDAAAD*
Ga0066654_105181562	3300005587	Soil	AAAEIEILPLPVDLSTTVSMAWHRRAASEPAQAWFRSLLIDATRDDG*
Ga0066706_111934841	3300005598	Soil	AEQIAANAAIAITPLPIDFATTVSMAWHRRAAADPAQSWFRSLLSDAAAPDSSG*
Ga0066903_1011210461	3300005764	Tropical Forest Soil	SRIARQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRALLIEAAGD*
Ga0066903_1066658542	3300005764	Tropical Forest Soil	QIAATAEIGIRPLPIDLAATMSMAWHRRAASEPAQQWYRSLLIGAAAAE*
Ga0066903_1068202001	3300005764	Tropical Forest Soil	DLVATVPRRTARQIAAIAEIDIIPLALDLAVPVSMAWHRRAASEPAQVWFRSLLIEAARD
Ga0070717_100671151	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AAVPSRAARQIAGIAEIAILPLTVDLAVTVSMAWHRRAASEPAQAWFRALLIDAAAAE*
Ga0066652_1009088282	3300006046	Soil	TARQIAATAEIEILPLPVDLTATVSMAWHRRSASEAAQAWFRSLLIDAAQEHG*
Ga0075432_104724661	3300006058	Populus Rhizosphere	PGIAIAPLPIDFAATVSMAWHRRAASDPAQSWFRALLVGAASEQKGTG*
Ga0079222_125306881	3300006755	Agricultural Soil	EIETLALPIDLSVTVSMAWHRRAASEPAQSWFRSLLIEAAEG*
Ga0079221_105647211	3300006804	Agricultural Soil	VPMRVARHIAATPGIAIAPLPIDFAATVSMAWHRRAASDPAQSWFRALLVGAAAEEDETR
Ga0073928_103921044	3300006893	Iron-Sulfur Acid Spring	AMAEVEIMPLAIDLSATVSMAWHRRTTSEPAQIWFRSLLTEAAKD*
Ga0075436_1000866215	3300006914	Populus Rhizosphere	AEIEILPLPIDLSTTVSMAWHRRATSEPAQVWFRQLLTAAAQDEA*
Ga0075436_1013201351	3300006914	Populus Rhizosphere	IAAIAEIEIMPLPIDLSVTVSMAWHRRAASEPAQAWFRSLLVEAARD*
Ga0075435_1013204282	3300007076	Populus Rhizosphere	ARQIAATAEIEIMPLPIDFSMTVSMAWHRRTASEPAQAWFRAQLIEAASE*
Ga0099791_105043722	3300007255	Vadose Zone Soil	QIATVAAIEITPLAIDLSVPVSMAWHRRATSEPAQVWFRSLLIEAARD*
Ga0099829_104009091	3300009038	Vadose Zone Soil	IAATAEIAIMPLPIDFAMTVSMAWHRRAASDPAQAWFRAMLTDAAAEDG*
Ga0099828_119210311	3300009089	Vadose Zone Soil	RTARQIAATAEIAIMPLPIDFAMTVSMAWHRRAASDPAQSWFRALLIDAAAEDG*
Ga0105240_115365451	3300009093	Corn Rhizosphere	ATVPQRAARQIAATGNIETVPLPLDLAMTVSIAWHRRVTSDPAQNWFRSLLVDAAGL*
Ga0066709_1016847432	3300009137	Grasslands Soil	EQIAATAEVAILPLPIDLEATVSMAWHRRAASEPAQAWFRSLLIAAAQQDR*
Ga0066709_1023048071	3300009137	Grasslands Soil	ATVPSRTARQIAATAEIEILPLPIDLAMTVSMAWHRRAASEPAQSWFRSLLIDAAAE*
Ga0099792_106737161	3300009143	Vadose Zone Soil	RTARQIAATAEIAIMPLPIDFAMTVSMAWPRRAASDPAQAWFRAMLTDAAAEDG*
Ga0116225_14675102	3300009524	Peatlands Soil	AAALIAAHAEIAILPLPIDFAATVSMAWHRRAASEPAQAWFRKLLTEAAG*
Ga0126384_117493211	3300010046	Tropical Forest Soil	RRVAEQIAANAGIAITPLPIDFATTVSMAWHRRATGDPAQSWFRALLTDAAAID*
Ga0126382_120461391	3300010047	Tropical Forest Soil	TARQIAATAEIEIMPLPIDFAMTVSMAWHRRAASEPAQAWFRSRLIEAARD*
Ga0126373_112002261	3300010048	Tropical Forest Soil	VPRRVAEQIAATAAIVITPLPIDFAMTVSMAWHRRAAGDPAQSWFRATLT
Ga0126306_111223121	3300010166	Serpentine Soil	RQIAAIADIEIMPLPIDFSATVSLAWHRRTATEPAQLWFRSLLLDAAAYQG*
Ga0134064_102343621	3300010325	Grasslands Soil	IAAAAEIEILPLPVDLSTTVSMAWHRRAASDPAQVWFRQLRREAAEDEA*
Ga0126370_112421661	3300010358	Tropical Forest Soil	ALAEIEIVPLPIDLAVTASMAWHRRAASEPAQVWFRSLLIEAAKD*
Ga0126376_124428153	3300010359	Tropical Forest Soil	AEIEIVPLPIDLAVTASMAWHRRATSEPAQVWFRSLPIEAAKD*
Ga0126381_1010921391	3300010376	Tropical Forest Soil	IAAIADIEITPLAIDLSVPVSMAWHRRAASEPAQIWFRSLLIEAVRD*
Ga0126383_114834533	3300010398	Tropical Forest Soil	ATVPRRVAEQIAANAAIAIMPSPIDFATTVSMAWHRRAAGDPAQSWFRSLLTNAAAAE*
Ga0126383_131269391	3300010398	Tropical Forest Soil	RTAQQIAAIAAIEIMPLAIDLSVPVSMAWHRRATSEPAQVWFRSLLIEAARE*
Ga0150983_159586702	3300011120	Forest Soil	SDLVATVPRRTARQIAAIAEIEITPLALDLSVPVSMAWHRRAASEPAQVWFRSLLIEAARE*
Ga0120139_11766502	3300012019	Permafrost	MHDRQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRSLLIEAAAD*
Ga0137362_101792441	3300012205	Vadose Zone Soil	AEIEIMPLALDLSVPVSMAWHRRAASEPAQVWFRSLLIDAAGD*
Ga0137377_117258671	3300012211	Vadose Zone Soil	ATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRSLLIAAASD*
Ga0137360_103271651	3300012361	Vadose Zone Soil	TVPRRTARQIAAIAEIEIMPLALDLSVPVSMAWHRRATSEPAQVWFRSLLIDAAGD*
Ga0137358_103148332	3300012582	Vadose Zone Soil	VATVPRRTARQIAATAEIAIMPLPIDFAMTVSMAWHRRAASDPAQAWFRALLVDAATEDG
Ga0137395_104962772	3300012917	Vadose Zone Soil	PSRTARQIAATAEIEILPLPIDLMMTVSMAWHRRAASEPAQAWFRSLLTAAAE*
Ga0182024_101605821	3300014501	Permafrost	IAATAEVTIMPLPIDFSVTVSMAWHRRSATDPAQVWFRSLLVEALAA*
Ga0132256_1014534232	3300015372	Arabidopsis Rhizosphere	VPQRTARRIATIADIEIMPLPIDFSTTVSLAWHRRSASDPAQSWFRSLLIAAAE*
Ga0182034_104150663	3300016371	Soil	QQMAAIAEIEIMPLAIDLSVPVSMAWHRRATSESAQAWFRSLLIEAARE
Ga0182037_113728191	3300016404	Soil	QIAALAEIEIMPLPIDLSVPVSMAWHRRAASEPAQIWFRSLLIEAANNRSLVHHGSA
Ga0187782_102862601	3300017975	Tropical Peatland	ARQIAATGEIDIMPLPIDFSMTVSMAWHRRAQSEPAQTWFRALLTDAAV
Ga0066669_109810521	3300018482	Grasslands Soil	ISAMADLRIMPLAIDLSVTVSMAWHRRATSEPAQSWFRSLLTEAAKD
Ga0190264_110573442	3300019377	Soil	ATVPMRVSRHSAATPGIVIAPRPIDFAATVSMAWHRRAASDPAQSWFRALLTGAAAEQGGTE
Ga0210395_102782361	3300020582	Soil	LIAAHTAITTLPLPMDHAATVSMAWHRRTTSEPAQAWFRGLLHEAARE
Ga0210401_109496872	3300020583	Soil	ELIAATARVAVTPLPIDFALTVSMAWHRRAATDPAQSWFRSLLIEAAAA
Ga0210400_101360093	3300021170	Soil	EQIAANAAIAITPLPIDFATTVSMAWHRRAAADPAQSWFRSLLTDAAAADSTGGSAPSSP
Ga0210408_106998792	3300021178	Soil	TAEIEILPLPIDFSMTVSMAWHRRAASEPAQVWFRSLLIAAAND
Ga0210389_103019541	3300021404	Soil	TVPRRVAELIAATARVAVTPLPIDFALTVSMAWHRRAATDPAQSWFRSLLIEAAAA
Ga0210387_112080791	3300021405	Soil	DIAEIEIMLLPIDLSVPISMAWHRRATSEPAQVWFRSLLIEAASN
Ga0210386_101498853	3300021406	Soil	DLVATVPQRTARQIAAMADIQIMPLAIDLSATVSMAWHRRAASEPAQIWFRSLLTEAARD
Ga0210398_106304261	3300021477	Soil	ATLIAAHAEIAILPLPIDLSATVSMAWHRRTTSEPAQAWFRKLLVDAAE
Ga0210410_113272161	3300021479	Soil	AEQIAANAAIAITPLPIDFATTVSMAWHRRAAADPAQSWFRALLTDAAAADSTGDSAPSSPD
Ga0126371_113177043	3300021560	Tropical Forest Soil	AEQIAANAAIAITPLPIDFATTVSMAWHRRAAADPAQSWFRSLLTDAAGMGGTLGCSDTS
Ga0126371_116848762	3300021560	Tropical Forest Soil	QIAALAEIEIMLLPIDLSVPVSMAWHRRATSEPAQVWFRSLLIEAASD
Ga0212123_104967801	3300022557	Iron-Sulfur Acid Spring	AMAEVEIMPLAIDLSATVSMAWHRRTTSEPAQIWFRSLLTEAAKD
Ga0207693_105219612	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RQIAAIAEIEIMPLAIDLSVTVSMAWHRRAASEPAQAWFRALLIKAARD
Ga0207664_105587811	3300025929	Agricultural Soil	AATARVTVPPLPIDFALTVSMAWHRRAATDPAQSWFRSLLIEAAAA
Ga0207708_118217551	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ARHIAATPGIAIAPLPIDFAATVSMAWHRRAASDPAQSWFRALLVGAASEQKGTG
Ga0209027_10925363	3300026300	Grasslands Soil	IAAAAEIEILPLPVDLSTTVSMAWHRRAASEPAQVWFRQLLTEAAQDEA
Ga0209648_107003581	3300026551	Grasslands Soil	VKRSAVPERTPRQIAASAAAELQITKLPIDRSATVSMAWHRGTASEPAQTWFRSLLIDAAKSGD
Ga0208860_10161561	3300027076	Forest Soil	ELIAATARVAVTPLPIDFALTVSMAWHHRAATDPAQSWFRSLRC
Ga0209283_109854762	3300027875	Vadose Zone Soil	IAATAEIAIMPLPIDFAMTVSMAWHRRAASDPAQSWFRALLIDAAAEDG
Ga0209526_100709594	3300028047	Forest Soil	ATVPRRTARQIAAIAEIEIMPLALDLSVPVSMAWHRRATSEPAQIWFRSLLTAAAKD
Ga0209526_102203091	3300028047	Forest Soil	ATVPRRTARQIAAIAEIEIMPLALDLSVPVSMAWHRRATSEPAQVWFRSLLTAAAKD
Ga0222749_102084282	3300029636	Soil	LVATVPRRTARQIAAIAEIEITPLALDLSVPVSMAWHRRAASEPAQVWFRSLLIEAATE
Ga0210259_113915761	3300030625	Soil	TVPRRTARQIAATAEVEIMPLPIDFSTTVSMAWHRRAASEPAQGWFRALLIEAAND
Ga0318571_100648511	3300031549	Soil	PRRTAQQIAVITEVEIVPLAIDLSVPVSMAWHRRATSEPAQSWFRSLLIEAARD
Ga0318528_102737002	3300031561	Soil	ATVPSRIARQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRALLIEAAGD
Ga0318542_103197463	3300031668	Soil	VATVPRRTAQQIAAMAEIEIMPLAIDLSVPVSMAWHRRATSEPAQAWFRSLLIEAARD
Ga0307374_101730711	3300031670	Soil	LVATVPSRTARQIALTAEIAILPLPIDFAMTVSMAWHRRAASEAAQSWFRGLLTDAAKGD
Ga0318561_103520321	3300031679	Soil	QIAAMAEIEIMPLAIDLSVHVSMAWHRRATSEPAQVWFRSLLIEAAND
Ga0318574_100254721	3300031680	Soil	AIAEIEIMPLAIDLSVPVSMAWHRRAASEPAQSWFRSLLIEAASE
Ga0310686_1124186652	3300031708	Soil	VPRRTARQIAATAEIEIMPLPIDFSTTVSMAWHRRAASEPAQAWFRALLIEAAQ
Ga0306917_103343642	3300031719	Soil	AQQIAVITEVEIVPLAIDLSVPVSMAWHRRATSEPAQSWFRSLLIEAARD
Ga0318500_103356661	3300031724	Soil	TVPRRTAQQIAAMAEIEIMPLAIDLSVPVSMAWHRRATSEPAQAWFRSLLIEAARD
Ga0318500_105741872	3300031724	Soil	RRTAQQIAVITEVEIVPLAIDLSVPVSMAWHRRATSEPAQSWFRSLLIEAARD
Ga0318501_101463333	3300031736	Soil	VPRRVAEQIATNAAIAITPLPIDFATTVSMAWHRRAAGDQAQSWFRTLLTNAAAAE
Ga0318492_101322021	3300031748	Soil	TVPRRVAEQIAANAEIAITPLPIDFATTVSMAWHRRAAGDPAQSWFRALLTDAAAIE
Ga0318494_104276463	3300031751	Soil	SDLIATVPRRVAEQIATNAAIAITPLPIDFATTVSMAWHRRAAGDQAQSWFRTLLTNAAAAE
Ga0318521_100051181	3300031770	Soil	VATVPRRTAQQIAVITEVEIVPLAIDLSVPVSMAWHRRATSEPAQSWFRSLLIEAARD
Ga0318546_101652331	3300031771	Soil	IADIEIMPLAIDLSVPVSMAWHRRAASEPAQIWFRSLLVEAVRD
Ga0318557_100050631	3300031795	Soil	PRRVAEQIAANAEIAITPLPIDFATTVSMAWHRRAAGDPAQSWFRALLTDAAAIE
Ga0318544_100058651	3300031880	Soil	ATVPRRVAEQIAANAEIAITPLPIDFATTVSMAWHRRAAGDPAQSWFRALLTDAAAIE
Ga0318544_100083546	3300031880	Soil	RTAQQIAAMAEIEIMPLAIDLSVPVSMAWHRRATSEPAQAWFRSLLIEAARD
Ga0318536_102765131	3300031893	Soil	ATVPRRVAEQIATNAAIAITPLPIDFATTVSMAWHRRAAGDLAQSWFRTLLTNAAAAE
Ga0318551_100385203	3300031896	Soil	MAEIEIMPLAIDLSVPVSMAWHRRATSESAQAWFRSLLIEAARE
Ga0318520_100596681	3300031897	Soil	RQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRALLIEAAGD
Ga0310910_101711951	3300031946	Soil	DLVATVPHRTARQIAAIADIEIMPLAIDLSVPVSMAWHRRAASEPAQIWFRSLLVEAVRD
Ga0308176_118213582	3300031996	Soil	PTRVAKQIAASAGIEIKPLPIDFTATVSMAWHRRTASDPAQTWFRSLLIGATAE
Ga0318507_105221552	3300032025	Soil	AQHIAAMAEIEIMPLAIDLSVPVSMAWHRRATSESAQAWFRSLLIEAARE
Ga0318556_100190421	3300032043	Soil	RRTAQQIATMAEIEITPLAIDLSVPVSMAWHRRAASEPAQSWFRSLLIEAASE
Ga0318575_101614731	3300032055	Soil	QQIATMAEIEITPLAIDLSVPVSMAWHRRAASEPAQSWFRSLMIEAASE
Ga0318510_104144522	3300032064	Soil	VPRRTAQQIATMAEIEITPLAIDLSVPVSMAWHRRAASEPAQSWFRSLLIEAASE
Ga0318553_103242991	3300032068	Soil	TVPRRTARQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRSLLIEAASD
Ga0306924_106498231	3300032076	Soil	TARQIAAMADIQIMPLAIDLSATVSMAWHRRATREPAQIWFRSLLTEAARD
Ga0318518_100187645	3300032090	Soil	QQMAAIAEIEIMPLAIDLSVPVSMAWHRRAASEPAQSWFRSLLIEAASE
Ga0318577_101855062	3300032091	Soil	IAAIADIEIMPLAIDLSVHVSMAWHRRAASEPAQIWFRSLLVEAVRD
Ga0318577_101993253	3300032091	Soil	RRTARQIAATAEIEIMPLPIDFSMTVSMAWHRRAASEPAQAWFRSLLIEAASD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences