Metagenome / Metatranscriptome Family F074694

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074694
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	61 residues
Representative Sequence	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPATPPSRPEGDWRLLDPVTYENISVFP
Number of Associated Samples	87
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	94.96 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.798 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (57.983 % of family members)
Environment Ontology (ENVO)	Unclassified (56.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.91% β-sheet: 0.00% Coil/Unstructured: 72.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00072	Response_reg	18.49
PF07676	PD40	5.04
PF04055	Radical_SAM	1.68
PF03928	HbpS-like	0.84
PF13683	rve_3	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.12 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.29 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Unclassified	root	N/A	4.20 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10464417	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300002914\|JGI25617J43924_10117919	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300002914\|JGI25617J43924_10360517	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005163\|Ga0066823_10125246	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300005175\|Ga0066673_10034421	All Organisms → cellular organisms → Bacteria → Acidobacteria	2460	Open in IMG/M
3300005177\|Ga0066690_10781871	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300005556\|Ga0066707_10260754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300005559\|Ga0066700_10474377	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300006031\|Ga0066651_10011737	All Organisms → cellular organisms → Bacteria → Acidobacteria	3579	Open in IMG/M
3300006034\|Ga0066656_10901307	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300006791\|Ga0066653_10443244	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300006794\|Ga0066658_10913881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300006796\|Ga0066665_11040523	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300006800\|Ga0066660_10131449	All Organisms → cellular organisms → Bacteria → Acidobacteria	1826	Open in IMG/M
3300007255\|Ga0099791_10039004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2104	Open in IMG/M
3300007258\|Ga0099793_10014844	All Organisms → cellular organisms → Bacteria → Acidobacteria	3102	Open in IMG/M
3300007258\|Ga0099793_10018147	All Organisms → cellular organisms → Bacteria → Acidobacteria	2848	Open in IMG/M
3300009038\|Ga0099829_11351765	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300009088\|Ga0099830_10095563	All Organisms → cellular organisms → Bacteria → Acidobacteria	2209	Open in IMG/M
3300009088\|Ga0099830_11010804	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300009088\|Ga0099830_11435303	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300009089\|Ga0099828_10511957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300009090\|Ga0099827_10068440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2732	Open in IMG/M
3300009090\|Ga0099827_12006279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009143\|Ga0099792_10008488	All Organisms → cellular organisms → Bacteria → Acidobacteria	4249	Open in IMG/M
3300010336\|Ga0134071_10442042	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300011269\|Ga0137392_10059716	All Organisms → cellular organisms → Bacteria → Acidobacteria	2899	Open in IMG/M
3300011269\|Ga0137392_10407175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300011269\|Ga0137392_10558417	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300011269\|Ga0137392_11200654	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300011269\|Ga0137392_11543085	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300011270\|Ga0137391_11543746	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300011271\|Ga0137393_11640605	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012096\|Ga0137389_10052439	All Organisms → cellular organisms → Bacteria → Acidobacteria	3087	Open in IMG/M
3300012096\|Ga0137389_11315372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012198\|Ga0137364_10297271	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300012198\|Ga0137364_10874958	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300012208\|Ga0137376_10596590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300012208\|Ga0137376_11413810	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300012285\|Ga0137370_10847018	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012357\|Ga0137384_10079431	All Organisms → cellular organisms → Bacteria → Acidobacteria	2726	Open in IMG/M
3300012359\|Ga0137385_11587568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012361\|Ga0137360_10987353	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300012582\|Ga0137358_10607452	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300012683\|Ga0137398_10026168	All Organisms → cellular organisms → Bacteria → Acidobacteria	3242	Open in IMG/M
3300012683\|Ga0137398_11010029	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012917\|Ga0137395_11161122	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300012918\|Ga0137396_10411220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300012918\|Ga0137396_10842044	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300012922\|Ga0137394_11519165	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300012922\|Ga0137394_11554491	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300012923\|Ga0137359_10135078	All Organisms → cellular organisms → Bacteria → Acidobacteria	2195	Open in IMG/M
3300012925\|Ga0137419_10050469	All Organisms → cellular organisms → Bacteria → Acidobacteria	2681	Open in IMG/M
3300012925\|Ga0137419_10771241	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300012925\|Ga0137419_11042356	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300012927\|Ga0137416_10089433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2288	Open in IMG/M
3300012927\|Ga0137416_10430411	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300012927\|Ga0137416_11413667	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300012929\|Ga0137404_10108149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2254	Open in IMG/M
3300012929\|Ga0137404_11677166	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300014150\|Ga0134081_10090041	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300014154\|Ga0134075_10414742	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300015052\|Ga0137411_1082351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300015053\|Ga0137405_1403064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300015241\|Ga0137418_10527652	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300015241\|Ga0137418_10756063	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300015245\|Ga0137409_10881359	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300018468\|Ga0066662_10461665	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300018468\|Ga0066662_11561653	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300020022\|Ga0193733_1083941	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300020579\|Ga0210407_11413054	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300020580\|Ga0210403_11267666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300020581\|Ga0210399_10103718	All Organisms → cellular organisms → Bacteria → Acidobacteria	2328	Open in IMG/M
3300020582\|Ga0210395_11201907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300021086\|Ga0179596_10180366	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300021086\|Ga0179596_10546862	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300021168\|Ga0210406_10104058	All Organisms → cellular organisms → Bacteria → Acidobacteria	2411	Open in IMG/M
3300021170\|Ga0210400_10340178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1234	Open in IMG/M
3300021178\|Ga0210408_10824543	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300021181\|Ga0210388_10221456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1658	Open in IMG/M
3300021401\|Ga0210393_10661560	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300021433\|Ga0210391_10404603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300022533\|Ga0242662_10146609	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300022726\|Ga0242654_10079549	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300024288\|Ga0179589_10223764	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300024330\|Ga0137417_1077164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300024330\|Ga0137417_1205276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1740	Open in IMG/M
3300024330\|Ga0137417_1248357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1521	Open in IMG/M
3300024330\|Ga0137417_1455959	All Organisms → cellular organisms → Bacteria → Acidobacteria	5720	Open in IMG/M
3300025910\|Ga0207684_10165290	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300026277\|Ga0209350_1019709	All Organisms → cellular organisms → Bacteria → Acidobacteria	2086	Open in IMG/M
3300026314\|Ga0209268_1041015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300026316\|Ga0209155_1208925	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300026325\|Ga0209152_10229281	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300026325\|Ga0209152_10315255	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300026330\|Ga0209473_1109033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300026332\|Ga0209803_1013583	All Organisms → cellular organisms → Bacteria → Acidobacteria	4208	Open in IMG/M
3300026359\|Ga0257163_1032309	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300026515\|Ga0257158_1061620	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300026527\|Ga0209059_1054100	All Organisms → cellular organisms → Bacteria → Acidobacteria	1760	Open in IMG/M
3300026540\|Ga0209376_1254000	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300026551\|Ga0209648_10017152	All Organisms → cellular organisms → Bacteria	6317	Open in IMG/M
3300026555\|Ga0179593_1008963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300026557\|Ga0179587_10348665	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300026557\|Ga0179587_11012046	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300027643\|Ga0209076_1014240	All Organisms → cellular organisms → Bacteria → Acidobacteria	2089	Open in IMG/M
3300027846\|Ga0209180_10471057	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300027862\|Ga0209701_10198375	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300027875\|Ga0209283_10662224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300029636\|Ga0222749_10047910	All Organisms → cellular organisms → Bacteria → Acidobacteria	1879	Open in IMG/M
3300031720\|Ga0307469_10346861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300031720\|Ga0307469_12010366	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300031962\|Ga0307479_11111109	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300032174\|Ga0307470_10773492	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.48%
Loam	Environmental → Terrestrial → Soil → Loam	2.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	62.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	57.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_104644171	3300002908	Grasslands Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPV
JGI25617J43924_101179192	3300002914	Grasslands Soil	MERSIFAALIGGLLGITTLGGLALVGSTPGYPAAPSSRPEGDWRLLEPVTYENISVFPVVSSYGQD
JGI25617J43924_103605171	3300002914	Grasslands Soil	MERSIFAALIGGLLGITLGGLAFVGSAPEPPAAPSSRPEGEWRLLDPINYENIS
Ga0066823_101252462	3300005163	Soil	MERSIFTALIGGLLGITAFGGLALVGSDSGSPEPPSSRPEGEWRLLDPVTY
Ga0066673_100344213	3300005175	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPVVYEN
Ga0066690_107818712	3300005177	Soil	MERSIFAALIGGLLGITALGCLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSSLSQDTSPFLTLEE
Ga0066707_102607542	3300005556	Soil	MERSIFTALIGGLLGIAAFGGLAFVGAGPGSPTAPSSRLEGEWRLLDPVTYENISIFPVVSSSN
Ga0066700_104743772	3300005559	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSS
Ga0066651_100117371	3300006031	Soil	MERSIFTALIGGLLGITTFGGLAFVGSAPGSPAAPASRPEGDWQLLDPITYENISVFPVVSSYSQDTSPFLTLE
Ga0066656_109013071	3300006034	Soil	MERSIFTALIGGLLGITTFGGLAFVGSAPGSPAAPASRAEGDWRLLDPI
Ga0066653_104432441	3300006791	Soil	MERSIFAALIGGLLGITALGGLAFVGPTPGAPSALPSRPEGEWRLLDPVVYENISIFPVVSSQS
Ga0066658_109138812	3300006794	Soil	MERSIFAALIGGLISITTLGGLAFVGSAPGSPAAPPSRPEGDWRLLDPVTYENISVFP
Ga0066665_110405231	3300006796	Soil	MERSILAALIGGLLGITALGGLAFVSSAPGSSSALPSRPEGEWRLLDPIVYENISVFPV
Ga0066660_101314491	3300006800	Soil	MERSIFAALIGGLLGITALGCLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSSL
Ga0099791_100390041	3300007255	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPAAPPSRSESDWRLLDPVTYENISV
Ga0099793_100148441	3300007258	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSGHGSPAAPGSHPEGDWRLLDPVTYENISVFPV
Ga0099793_100181473	3300007258	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLALVGSAPGYPAAPSSRPEGDWQLLEPVTY
Ga0099829_113517652	3300009038	Vadose Zone Soil	MERSIITALIGGLLGITAFGGLALVGSGPGTPAAPSSRPEGEWRLLDPVTYENISVFPVVSSYNQDTSLFLTLEE
Ga0099830_100955633	3300009088	Vadose Zone Soil	MERSIFTALIGGLLGISAFGGLAFVGSGPGAPAAPSSRPEGEWRLLDPATYENISIFPVVSSYSQDTSPFLT
Ga0099830_110108042	3300009088	Vadose Zone Soil	MERSIFTALVGGLLGISAFGGLAFVGSEPGSAAAPSSRPEGEWRLLDPATYENISIFPVVSSYSQDTSPFLT
Ga0099830_114353032	3300009088	Vadose Zone Soil	MERSIFTALLGGLLGITTLGGLAFVGSEPGSPAAPPSRPEGEWRLLDPVNYENISIFPVVSSY
Ga0099828_105119572	3300009089	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVVSAPGLAAAPSSRPEGDWRLLDPVTHENISVFPVVSSFSQDTSPFL
Ga0099827_100684401	3300009090	Vadose Zone Soil	MERMIFAALIGGLLGITTLGGLAFVGASPGSPAAPPARPEGDWRLLDPVNYENISVFPVVSSYNQDTSPFLTLEEG
Ga0099827_120062791	3300009090	Vadose Zone Soil	MERSIFTALLGGLLGITTLGGLAFVGSEPGSPAAPPSRPEGEWRLLDPVNYENISIFPVVSSYNQDTSL
Ga0099792_100084881	3300009143	Vadose Zone Soil	MERMIFAALIGGLLGITTLGGLAFVGASPGSPAAPPARPEGDWRLLDPVN
Ga0134071_104420422	3300010336	Grasslands Soil	MERSIFTALIGGLLGISAFGGLALVGSGPGSPAIPSSRPEGEWRLLDPVTYE
Ga0137392_100597163	3300011269	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLALVGSAPGYPATPSSRPEGDWRLLEPVTYENISVFP
Ga0137392_104071753	3300011269	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSSAAQRSRPEGEWRLLDPVTYENISVFPVVSSQSQDTSSF
Ga0137392_105584172	3300011269	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVGPAPGSPAAPSSRPEGDWRLLDPATYENISVF
Ga0137392_112006541	3300011269	Vadose Zone Soil	MERSIFTALIGGLLGITALGGLAFVASAPGSSAAPPSRPDGEWRLLDPVTYE
Ga0137392_115430851	3300011269	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSVPGSPAAPSSRPEGEWQLLDPITYENISVFP
Ga0137391_115437461	3300011270	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSVPGSPAAPSSRPEGEWQLLDPITYENISVFPVVSSYSQ
Ga0137393_116406051	3300011271	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGLPAAPSSRPEGDWRLLDPVTYENISVFPVVSTFSQDTS
Ga0137389_100524393	3300012096	Vadose Zone Soil	MERTIFTALLGGLLGITALGGLAFVGSVPGSPVPLPPRPEGDWRLLDPVTYENISIFPVVSSYNQDTSPFLTLEE
Ga0137389_113153721	3300012096	Vadose Zone Soil	MERSIFAALIGGLLGITTLGALAFVGSAPGSPAAPPSRSESDWRLLDPVTYENISVFP
Ga0137388_109221601	3300012189	Vadose Zone Soil	MERSLFTALIGGLLGISTLGGLAFIWGPPEAHQPPPPRAQGDLRLLDPVT*
Ga0137364_102972713	3300012198	Vadose Zone Soil	MERSIFAALIGGLLGITVVGGLAFVGSAPGSLSGLTSRPEGEWRLLDPVVYENISIFPVV
Ga0137364_108749581	3300012198	Vadose Zone Soil	MERSIFAALIGGLLSITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPIVYENISIFPVVSSQSQDTS
Ga0137376_105965901	3300012208	Vadose Zone Soil	MERSIFAALIGGLISLTTLGGLAFVGSAPGSPAAPPSRPEGDWRLLDPVTYENISVFPIVSPYSPDTSLFLTLEEG
Ga0137376_114138101	3300012208	Vadose Zone Soil	MERSIFTALIGGLLGITTLGGLAFVGSAPGSPAAPSSRPEGDWRLFDPVTYENISVFPVVSSYSQDT
Ga0137370_108470181	3300012285	Vadose Zone Soil	MERSIFTALIGGLLGITTLGGLAFVGSAPGSSAAPSSRLEGDWRLLDAVTYENISVFPV
Ga0137384_100794313	3300012357	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSVPEPPAAPSSRPEGEWRLLDPVNYENISVFPVVSSYNQDTSPFLTL
Ga0137385_115875682	3300012359	Vadose Zone Soil	MERSIFTALIGGLLGITTLGGLAFLGSAPGSPAAPASRPEGDWRLLDPITYQNISVFPVV
Ga0137360_109873532	3300012361	Vadose Zone Soil	MERSIFTALLGGLLGITTLGGLAFVGSEPGSPAAPPSRPEGEWRLLDPVNYENISIFPVVSS
Ga0137358_106074521	3300012582	Vadose Zone Soil	MERSIFTALIGGLLGITALGGLAFVGSAPGAPSAPAPRPEGDWRLLDPVTY
Ga0137398_100261684	3300012683	Vadose Zone Soil	MERSIFTALIGGLLGIAAFGGLALVGAGPGSPTAPSSRPEGEWRLLDPVTYENISIFPVVSSSNQDTSPFL
Ga0137398_110100291	3300012683	Vadose Zone Soil	MERSIFTALIGGLLGITALGGLAFVGSAPGAPSAPAPRPEGDWRLLDPVTYENISVFPVVSSYSQDTSPFLTLE
Ga0137395_111611222	3300012917	Vadose Zone Soil	MERSIFAALIGGFLGITALGSLAFVGSVPGLPAVPSSRPEGEWQLLDPVTYENISVFPVV
Ga0137396_103898191	3300012918	Vadose Zone Soil	MERSIFTALIGGLLGITTLGGLAFVGSAPGSPAAPASRPEGDWRLLDP
Ga0137396_104112202	3300012918	Vadose Zone Soil	MERSLFAALIGGLLGISTLGGLAFIWGPAEAHQPPPPRSEGDWRLLDPVTYENISIFPVVSSNSQDTSPFL
Ga0137396_104607292	3300012918	Vadose Zone Soil	MERSIFAALMGGFLAIGTLGTLAFVRAPFESRQPPPSRPEGEWRLLDPV
Ga0137396_108420442	3300012918	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPATPPSRPEGDWRLLDPVTYENISVFP
Ga0137394_115191652	3300012922	Vadose Zone Soil	MERSIFTALFGGLLGITAFGGLALVGSVPGTPEPPPSRPEGEWRLLDPVNYENISVFPVV
Ga0137394_115544912	3300012922	Vadose Zone Soil	MERSLFAALIGGLLGISTLGGLGFIWGPTEAHQPPPPRSEGDWRLLDPVTYENISVFPVVSSN
Ga0137359_101350783	3300012923	Vadose Zone Soil	MERSLFTALIGGLLGITAFGGLALVGSVPGTPEPPPSRPEGEWRLLDPVSYENISLYPVVSSYSQD
Ga0137419_100504691	3300012925	Vadose Zone Soil	MERSIFTALFGGLLGITAFGGLALVGSVPGTPEPAPSRPEGEWRLLDPVSYENISVFPVVSSYSQDTSSFLTLEE
Ga0137419_107712412	3300012925	Vadose Zone Soil	MERSIFTALLGGFLGITTLGGLAFVGSEPGSPAAPPSRPEGEWRLLDPVNYENISIFPVVSSYNQD
Ga0137419_110423562	3300012925	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVGSAPNSPSALPSRPEGEWRLLDPVVYENISIFPVVSS
Ga0137416_100894331	3300012927	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSVPGTPEPPPSRPEGEWRLLDPVS
Ga0137416_104304112	3300012927	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPAAPPSRSESDWRLLDPVTY
Ga0137416_114136672	3300012927	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLALVGSAPGYPAAPSSRPEGDWRLLEPVTY
Ga0137404_101081493	3300012929	Vadose Zone Soil	MERTIFTALLGGLLGITTLGGLAFVGSEPGSPAAPPSKPEGEWRLLDPVNYENISIFPVVSSYIQDTSLFLT
Ga0137404_116771662	3300012929	Vadose Zone Soil	MERSLFAALIGGLLGIGTFGGLAFIWGPGEAHQPPPSRSEGDWRLLDPVTYE
Ga0134081_100900411	3300014150	Grasslands Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPESEWRLLDPVVYENISIFP
Ga0134075_104147422	3300014154	Grasslands Soil	MERSIFAALVGGLLGISTFGGLAFIWGPFEPHQPPPPRGRSEGEWRLLDPVTYENISVFPVVSSNS
Ga0137411_10823512	3300015052	Vadose Zone Soil	MERSIFTALIGGLLGITTLGGLAFVGSAPGSPAAPPSRPEGDWRLLDPITYENISVFPVVSSYSQDTSSFLTLEEG
Ga0137405_11996253	3300015053	Vadose Zone Soil	MERSLFAALIGGLLGISTLGGLAFIWGPTEAHQPPPPRSEGDWRLLDPVTYENIS
Ga0137405_14030641	3300015053	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSVPGTPEPPPSRPEGEWRLLDPVSY
Ga0137420_11547361	3300015054	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPAAPSSRPEGDWPAPQSRHLRE
Ga0137418_105276522	3300015241	Vadose Zone Soil	MERSIFTALLGGFLGITTLGGLAFVGSEPGSPAAPPSRPEGEWRLLDPVNYENISIFPVVSSYNQDTSLFLTLEE
Ga0137418_107560632	3300015241	Vadose Zone Soil	MERSIFAALIGGLLGITALGGLAFVGSAPNSPSALPSRPEGEWRLLDPVVYENISIFPVVSST
Ga0137409_108813591	3300015245	Vadose Zone Soil	MERSIFAALVGGLLGISTLGGLAFVWGPFEPHQPPSPPGRPEGEWRLLEPVTYENNSVFAVVSSSSQETSP
Ga0066662_104616652	3300018468	Grasslands Soil	MERSIFTALIGGLVGITAFGGLALVGSGHGSPAAPASQPEGGWRFLEPVSLANILIFPVV
Ga0066662_115616531	3300018468	Grasslands Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISI
Ga0193733_10839412	3300020022	Soil	MERSIFAALIGGLISITTLGGLAFVGSAPGSPATPPSRPEGDWRLLDPVTYENISV
Ga0210407_114130541	3300020579	Soil	MERSIFTALFGGLLAITTLGGLAFVWGPPASPLTPPPSRSEGDWRLLEPVTYENISIFPVVS
Ga0210403_112676661	3300020580	Soil	MERSIFAALIGGLLGITTLGGLAFVGSGPGSPAAPFPRPEGDWRLLDSVNYENISVFP
Ga0210399_101037181	3300020581	Soil	MERSIFTALMGGLLGITAFGGLALVGSAPGTPEPPARPEGEWRLLDPVTYENISVFPVVSSY
Ga0210395_112019071	3300020582	Soil	MERSIFAALIGGLLGITALGGLAFVGAAPGSPAAPPSRHEGDWRLLDPVTYENISVFPVVSSYSQDTSPFLTLE
Ga0179596_101803661	3300021086	Vadose Zone Soil	MERSIYAALIGGLISITTLGGLAFVGSAPGSPAVPSPRPEGDWRLLDPVTYE
Ga0179596_105468622	3300021086	Vadose Zone Soil	MERSILTALIGGLLGIITLGGLAFVGSAPGSLAAPASRPEGDWRLLDPVTYENISVFPV
Ga0210406_101040581	3300021168	Soil	MERSIFNALIGGLLGITAFGGLALVGSVPGTPEPPSSRPEGEWRLLDPVIYENISVYAVVSSYSQDT
Ga0210400_103401782	3300021170	Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPDPPAAPALGPEGDWRLLDPVSYENISVFPVVSS
Ga0210408_108245432	3300021178	Soil	MERSVFTALIGALLGITAFGGLALVGSVPGSPDPPPSRPEGEWRLLDPVTFENISVFPVV
Ga0210388_102214563	3300021181	Soil	MERSFFPALLGTIIRSLLGITTLGGLAFVGSAPGPSAIASPPRSEGGWRLLDPITYENI
Ga0210393_106615601	3300021401	Soil	MERSFFPALLGTIIRSLLGITTLGGLAFVGSAPGPSAIASPPRSEGGWRLLDPITYENISIFPVV
Ga0210391_104046032	3300021433	Soil	MERSFFPALLGTIIRSLLGITTLGGLAFVGSAPGPSAIASPPRSEGDW
Ga0242662_101466092	3300022533	Soil	MERSIFNALIGGLLGITAFGGLALVGSVPGTPEPPSSRPEGEWRLLDPVIYENI
Ga0242654_100795491	3300022726	Soil	MERSIFAALIGGFLGITALGSLAFVSSGSGSPAAQPSRPEGEWRLLDPVTYENISVFPVV
Ga0179589_102237641	3300024288	Vadose Zone Soil	MERSILTALIGGLLGIITLGGLAFVGSAPGSLAAPASRPEGDWRLLDPVTYENISVFPVVSSYS
Ga0137417_10771641	3300024330	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPAAPSSRPEGDWRLLNPVTYENIS
Ga0137417_12052763	3300024330	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPGSPAAPSSRPDGDWRLLNPVTYENIS
Ga0137417_12483573	3300024330	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLALVGSAPGYPAAPSSRPEGDWRLLEP
Ga0137417_14559593	3300024330	Vadose Zone Soil	MERSIFTALIGGLLGITTLAALAFVGSAPGSRRRSPSRPEGDWRLLDPITYENISVFPVRQLLQPGHQFLPDS
Ga0207684_101652903	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MERSFLSAIVGGLLGITTFGSLAFVSVMAGSPGAPAPRPEGAWRLLDPVSYENISIFPV
Ga0209350_10197093	3300026277	Grasslands Soil	MERSIFTALIGGLLGITTFGGLAFVGSAPGSPAAPASRAEGDWRLLDPIAYENISVFPVVSSYSQDT
Ga0209268_10410153	3300026314	Soil	MERSIFAALIGGLLGITALGCLAFVGSAPGSPSALPSRPEGEWRLLDPVV
Ga0209155_12089252	3300026316	Soil	MERSIFAALIGGLLGITALGGLAFVGPTPGAPSALPSRPEGEWRLLDPVVYENISIFPVVSSQSQDTSPFLTLEEG
Ga0209152_102292811	3300026325	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDP
Ga0209152_103152552	3300026325	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSSL
Ga0209473_11090331	3300026330	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSSQGQDTSPFLTLE
Ga0209803_10135831	3300026332	Soil	MERSIFAALIGGLISISSLGGLAFVGSAPGSPAALPSRPEGDWRLLDPVTYE
Ga0257163_10323091	3300026359	Soil	MERSIFTALIGGLLGITTLGGLAFLGSAPGSPAALPSRPEGDWRLLDPVTYENIS
Ga0257158_10616202	3300026515	Soil	MERSFLAALIGGLLGIGTLGGLAFVGRAPGSETASPSRPEGDWRLLDPVTYENISVFPVVSSYSQDT
Ga0209059_10541003	3300026527	Soil	MERSIFAALIGGLLGITALGCLAFVGSAPGSPSALPSRPEGEWRLLDPVVYENISIFPVVSSLSQ
Ga0209376_12540002	3300026540	Soil	MERSIFAALIGGLLGITALGGLAFVGSAPGSPSALPSRPESEWRLLDPVVYENISIFPVV
Ga0209648_100171521	3300026551	Grasslands Soil	MERSIFAALIGGLLSITTLGGLAFVGSVPEPPPAPSSRPEGEWRLLDPVHYENISV
Ga0179593_10089631	3300026555	Vadose Zone Soil	MERSIFTALIGGLLGITAFGGLALVGSGHGSPAAPSSHPEGEWRLLDPVTYENISVFPVV
Ga0179587_103486651	3300026557	Vadose Zone Soil	MERSILAALIGGLLGITALGGLAFVSSAPGSSSALPSRPEGEWRLLDPIVYENISVFP
Ga0179587_110120461	3300026557	Vadose Zone Soil	MERSILTALIGGLLGIITLGGLAFVGSASGSLAARASRPEGDWRLLDPVTYENIS
Ga0209076_10142403	3300027643	Vadose Zone Soil	MERSILAALIGGLLGISAFGGLALVGPGPGGPAAPSSRPEGEWRLLDPDTYENIS
Ga0209180_104710571	3300027846	Vadose Zone Soil	MERSIITALIGGLLGITAFGGLALVGSGPGTPAAPSSRPEGEWRLLDPVTYENIS
Ga0209701_101983752	3300027862	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSVPEPSAAPSSRPEGEWRLLDPVNYENISVFPVVSSYNQDT
Ga0209283_106622242	3300027875	Vadose Zone Soil	MERSIFAALIGGLLGITTLGGLAFVGSAPCSPAAPPSRSEGDWRLLDPVTYENISVFP
Ga0222749_100479103	3300029636	Soil	MERSIFTAIIGGLLGITAFGGLALVGSVPGNADPPASRPEGEWRLLDPVTYENISVFPVVSSYSQD
Ga0307469_103468611	3300031720	Hardwood Forest Soil	MERSIFAALIGGLLSITTLGGLACVGSVPGSPAAPGTRPEGDWRLLEPVVYENI
Ga0307469_120103661	3300031720	Hardwood Forest Soil	MERSLFAALIGGLLGISTLGGLAFIWGPTEAHQPPPSRSEGDLRLLDPVTYENISVF
Ga0307479_111111091	3300031962	Hardwood Forest Soil	MERSIFTALIGGLLGITAFGGLAFVGSAPGSPSAPAPRPEGDWRLLDPVTYENISVFPVV
Ga0307470_107734921	3300032174	Hardwood Forest Soil	MERSIFAALVGGLLGISTLGGLTFVWGPFEPPQPPSRPGRSEGEWRLLEPVTYENISVFPVVSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences