Metagenome / Metatranscriptome Family F074687

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074687
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	77 residues
Representative Sequence	RKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASSD
Number of Associated Samples	78
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.88 %
% of genes near scaffold ends (potentially truncated)	88.24 %
% of genes from short scaffolds (< 2000 bps)	79.83 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (42.857 % of family members)
Environment Ontology (ENVO)	Unclassified (68.067 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.588 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.00% β-sheet: 0.00% Coil/Unstructured: 44.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF07690	MFS_1	26.05
PF02867	Ribonuc_red_lgC	4.20
PF01638	HxlR	3.36
PF12637	TSCPD	2.52
PF00583	Acetyltransf_1	1.68
PF06745	ATPase	1.68
PF14947	HTH_45	0.84
PF08471	Ribonuc_red_2_N	0.84
PF13673	Acetyltransf_10	0.84
PF01596	Methyltransf_3	0.84
PF01209	Ubie_methyltran	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	5.04
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.36
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.84
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.84
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.84
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
All Organisms	root	All Organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
cellular organisms	root	All Organisms → cellular organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10508902	Not Available	575	Open in IMG/M
3300002558\|JGI25385J37094_10066865	Not Available	1158	Open in IMG/M
3300002558\|JGI25385J37094_10138348	Not Available	665	Open in IMG/M
3300002560\|JGI25383J37093_10004179	All Organisms → cellular organisms → Bacteria	4451	Open in IMG/M
3300002560\|JGI25383J37093_10134004	Not Available	675	Open in IMG/M
3300002560\|JGI25383J37093_10144756	Not Available	635	Open in IMG/M
3300002561\|JGI25384J37096_10070217	Not Available	1287	Open in IMG/M
3300002561\|JGI25384J37096_10098891	Not Available	1020	Open in IMG/M
3300002561\|JGI25384J37096_10153698	Not Available	731	Open in IMG/M
3300002908\|JGI25382J43887_10153774	Not Available	1165	Open in IMG/M
3300002908\|JGI25382J43887_10166439	Not Available	1100	Open in IMG/M
3300002908\|JGI25382J43887_10381818	Not Available	595	Open in IMG/M
3300002911\|JGI25390J43892_10001083	All Organisms → cellular organisms → Bacteria	5538	Open in IMG/M
3300002911\|JGI25390J43892_10001503	All Organisms → cellular organisms → Bacteria	4854	Open in IMG/M
3300002911\|JGI25390J43892_10016596	Not Available	1753	Open in IMG/M
3300005166\|Ga0066674_10072325	Not Available	1580	Open in IMG/M
3300005166\|Ga0066674_10370898	Not Available	669	Open in IMG/M
3300005166\|Ga0066674_10397802	Not Available	639	Open in IMG/M
3300005167\|Ga0066672_10586250	Not Available	722	Open in IMG/M
3300005172\|Ga0066683_10072768	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300005174\|Ga0066680_10083479	Not Available	1930	Open in IMG/M
3300005174\|Ga0066680_10375138	Not Available	906	Open in IMG/M
3300005176\|Ga0066679_10147922	Not Available	1468	Open in IMG/M
3300005176\|Ga0066679_10463901	Not Available	828	Open in IMG/M
3300005178\|Ga0066688_10115029	Not Available	1657	Open in IMG/M
3300005186\|Ga0066676_10219113	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005447\|Ga0066689_10628904	Not Available	675	Open in IMG/M
3300005447\|Ga0066689_10721924	Not Available	622	Open in IMG/M
3300005450\|Ga0066682_10033907	All Organisms → cellular organisms → Bacteria	3012	Open in IMG/M
3300005450\|Ga0066682_10220609	Not Available	1217	Open in IMG/M
3300005552\|Ga0066701_10168510	Not Available	1328	Open in IMG/M
3300005555\|Ga0066692_10432007	Not Available	837	Open in IMG/M
3300005557\|Ga0066704_10899222	Not Available	548	Open in IMG/M
3300005569\|Ga0066705_10513060	Not Available	749	Open in IMG/M
3300005569\|Ga0066705_10895827	Not Available	527	Open in IMG/M
3300005586\|Ga0066691_10066664	Not Available	1964	Open in IMG/M
3300005586\|Ga0066691_10655258	Not Available	622	Open in IMG/M
3300006791\|Ga0066653_10780342	Not Available	502	Open in IMG/M
3300006796\|Ga0066665_10706268	Not Available	798	Open in IMG/M
3300006797\|Ga0066659_10685361	Not Available	836	Open in IMG/M
3300006797\|Ga0066659_11066358	Not Available	675	Open in IMG/M
3300006797\|Ga0066659_11154693	Not Available	647	Open in IMG/M
3300006800\|Ga0066660_10141305	Not Available	1771	Open in IMG/M
3300007258\|Ga0099793_10016826	Not Available	2940	Open in IMG/M
3300009012\|Ga0066710_100396959	Not Available	2055	Open in IMG/M
3300009012\|Ga0066710_104828748	Not Available	504	Open in IMG/M
3300009038\|Ga0099829_10051815	Not Available	3043	Open in IMG/M
3300009137\|Ga0066709_104364527	Not Available	516	Open in IMG/M
3300010304\|Ga0134088_10022220	Not Available	2820	Open in IMG/M
3300010323\|Ga0134086_10388111	Not Available	559	Open in IMG/M
3300010333\|Ga0134080_10053346	Not Available	1594	Open in IMG/M
3300010336\|Ga0134071_10071090	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300011269\|Ga0137392_10736601	Not Available	815	Open in IMG/M
3300011270\|Ga0137391_10629315	Not Available	897	Open in IMG/M
3300011271\|Ga0137393_10557318	Not Available	983	Open in IMG/M
3300012189\|Ga0137388_11844596	Not Available	536	Open in IMG/M
3300012198\|Ga0137364_10056145	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300012198\|Ga0137364_11274295	Not Available	548	Open in IMG/M
3300012199\|Ga0137383_10637454	Not Available	779	Open in IMG/M
3300012199\|Ga0137383_11005629	Not Available	607	Open in IMG/M
3300012199\|Ga0137383_11261175	Not Available	529	Open in IMG/M
3300012206\|Ga0137380_10242194	Not Available	1627	Open in IMG/M
3300012206\|Ga0137380_10549592	Not Available	1014	Open in IMG/M
3300012206\|Ga0137380_10773780	Not Available	830	Open in IMG/M
3300012208\|Ga0137376_10826453	Not Available	797	Open in IMG/M
3300012209\|Ga0137379_11755735	Not Available	516	Open in IMG/M
3300012285\|Ga0137370_10790015	Not Available	589	Open in IMG/M
3300012349\|Ga0137387_10014964	All Organisms → cellular organisms → Archaea	4678	Open in IMG/M
3300012349\|Ga0137387_11048591	Not Available	583	Open in IMG/M
3300012350\|Ga0137372_10004345	All Organisms → cellular organisms → Archaea	13787	Open in IMG/M
3300012351\|Ga0137386_10212328	Not Available	1390	Open in IMG/M
3300012351\|Ga0137386_10910624	Not Available	629	Open in IMG/M
3300012351\|Ga0137386_10948298	Not Available	614	Open in IMG/M
3300012357\|Ga0137384_10836929	Not Available	743	Open in IMG/M
3300012362\|Ga0137361_10984237	Not Available	763	Open in IMG/M
3300012362\|Ga0137361_11392102	Not Available	625	Open in IMG/M
3300012363\|Ga0137390_10981532	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	797	Open in IMG/M
3300012386\|Ga0134046_1035612	Not Available	546	Open in IMG/M
3300015241\|Ga0137418_10039348	All Organisms → cellular organisms → Bacteria	4363	Open in IMG/M
3300017659\|Ga0134083_10086635	Not Available	1222	Open in IMG/M
3300018433\|Ga0066667_10010823	Not Available	4385	Open in IMG/M
3300018468\|Ga0066662_11937996	Not Available	617	Open in IMG/M
3300018468\|Ga0066662_12235905	Not Available	574	Open in IMG/M
3300021046\|Ga0215015_10141996	Not Available	4589	Open in IMG/M
3300021088\|Ga0210404_10256518	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	952	Open in IMG/M
3300026295\|Ga0209234_1002914	Not Available	6503	Open in IMG/M
3300026298\|Ga0209236_1125657	Not Available	1125	Open in IMG/M
3300026307\|Ga0209469_1003710	All Organisms → cellular organisms → Bacteria	6814	Open in IMG/M
3300026310\|Ga0209239_1085530	Not Available	1356	Open in IMG/M
3300026313\|Ga0209761_1035405	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300026318\|Ga0209471_1192088	Not Available	787	Open in IMG/M
3300026318\|Ga0209471_1227745	Not Available	675	Open in IMG/M
3300026331\|Ga0209267_1123247	Not Available	1090	Open in IMG/M
3300026331\|Ga0209267_1167622	Not Available	887	Open in IMG/M
3300026332\|Ga0209803_1039190	Not Available	2169	Open in IMG/M
3300026332\|Ga0209803_1217703	Not Available	680	Open in IMG/M
3300026334\|Ga0209377_1258255	Not Available	573	Open in IMG/M
3300026334\|Ga0209377_1317040	Not Available	521	Open in IMG/M
3300026343\|Ga0209159_1167535	Not Available	811	Open in IMG/M
3300026524\|Ga0209690_1184188	Not Available	685	Open in IMG/M
3300026529\|Ga0209806_1159599	Not Available	849	Open in IMG/M
3300026529\|Ga0209806_1211469	Not Available	667	Open in IMG/M
3300026529\|Ga0209806_1215699	Not Available	657	Open in IMG/M
3300026530\|Ga0209807_1160826	Not Available	844	Open in IMG/M
3300026532\|Ga0209160_1022008	All Organisms → cellular organisms → Bacteria	4239	Open in IMG/M
3300026538\|Ga0209056_10053293	Not Available	3600	Open in IMG/M
3300026548\|Ga0209161_10147090	Not Available	1364	Open in IMG/M
3300026552\|Ga0209577_10014942	All Organisms → cellular organisms → Bacteria	6977	Open in IMG/M
3300027671\|Ga0209588_1103805	Not Available	914	Open in IMG/M
3300027748\|Ga0209689_1077719	Not Available	1766	Open in IMG/M
3300027748\|Ga0209689_1101998	Not Available	1478	Open in IMG/M
3300027748\|Ga0209689_1330950	Not Available	584	Open in IMG/M
3300027748\|Ga0209689_1355055	Not Available	560	Open in IMG/M
3300027862\|Ga0209701_10068246	Not Available	2254	Open in IMG/M
3300027875\|Ga0209283_10029853	Not Available	3395	Open in IMG/M
3300027875\|Ga0209283_10678384	Not Available	646	Open in IMG/M
3300031962\|Ga0307479_11498639	Not Available	631	Open in IMG/M
3300031962\|Ga0307479_11724794	Not Available	579	Open in IMG/M
3300032205\|Ga0307472_100186359	Not Available	1561	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.16%
Loam	Environmental → Terrestrial → Soil → Loam	0.84%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	63.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	42.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	20.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_105089023	3300001661	Forest Soil	LRKKVGFWVSVVIGMARQTDQLFGATEYVCVAHKGLKMVTVPVSTRRSLGLSLDRSADPDKIIPKIIARFDLRTGV*
JGI25385J37094_100668652	3300002558	Grasslands Soil	LSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
JGI25385J37094_101383481	3300002558	Grasslands Soil	TARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASSD*
JGI25383J37093_100041794	3300002560	Grasslands Soil	SIVTEMARQTDELFGRTESVLITHKGLKMVTIPXSARRSLGLSLDRSAXTEKIILKIMTKFDLAPSD*
JGI25383J37093_101340041	3300002560	Grasslands Soil	EMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKVMTKFDLGSSD*
JGI25383J37093_101447561	3300002560	Grasslands Soil	RTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRPADTEKIIQKIMTKFDLLSRD*
JGI25384J37096_100702172	3300002561	Grasslands Soil	NVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
JGI25384J37096_100988912	3300002561	Grasslands Soil	KKIGFWVSIITEMARQTDNLFGSTESICVTHKGLKMVTVPLSARRSLGLSLDRSADSEKIILKITAKFSLGPTV*
JGI25384J37096_101536981	3300002561	Grasslands Soil	ETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRPADTEKIIQKIMTKFDLLSRD*
JGI25382J43887_101537742	3300002908	Grasslands Soil	TKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGSTEYVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIITKFGLGSSE*
JGI25382J43887_101664391	3300002908	Grasslands Soil	NVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLAPTD*
JGI25382J43887_103818181	3300002908	Grasslands Soil	LFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASSD*
JGI25390J43892_100010831	3300002911	Grasslands Soil	NVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD*
JGI25390J43892_100015031	3300002911	Grasslands Soil	LSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKVMTKFDLGSSD*
JGI25390J43892_100165962	3300002911	Grasslands Soil	LSRSIDLRKKIGFWVSIITEMARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRAADTEKLILKIMTKFDLASSN*
Ga0066674_100723251	3300005166	Soil	RQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD
Ga0066674_103708981	3300005166	Soil	WSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0066674_103978021	3300005166	Soil	RQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD
Ga0066672_105862502	3300005167	Soil	EVTGYAETPRTKNVLSQSIDLRKKIGFWSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV*
Ga0066683_100727681	3300005172	Soil	ETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKVMTKFDLGSSD*
Ga0066680_100834792	3300005174	Soil	YAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLASTD*
Ga0066680_103751382	3300005174	Soil	SDPAIRVAAFIEGAEVTGYAETARTKNVLSQSIDLRKKIGFWVSIITEMARQTDELFGSTEYVLMTHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLVSSN*
Ga0066679_101479221	3300005176	Soil	WSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSDWTSSNQV*
Ga0066679_104639012	3300005176	Soil	WSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV*
Ga0066688_101150292	3300005178	Soil	VLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLSLSLDRSADTEKIILKIMTKFDLASTD*
Ga0066676_102191133	3300005186	Soil	SIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKVMTKFDLGSSD*
Ga0066689_106289041	3300005447	Soil	WSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0066689_107219242	3300005447	Soil	GRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV*
Ga0066682_100339073	3300005450	Soil	WSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD*
Ga0066682_102206091	3300005450	Soil	ELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0066701_101685101	3300005552	Soil	ESDPSIRVAAFIEGAEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0066692_104320071	3300005555	Soil	WSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0066704_108992222	3300005557	Soil	GFWSSIVTEMGRQTDELFGNTEYVLVTHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV*
Ga0066705_105130601	3300005569	Soil	QSGDLQKKIGFWVSVVTEMARQMDQLFGTTESVCVTHKGLRMVTVPVSGRRSLGLSLDRSADPDKMILKIMTKFDLASSN*
Ga0066705_108958271	3300005569	Soil	EMARQMDQLFGTTESVCVTHKGLRMVTVPVSGRRSLGLSLDRSADADKTILKIMTKFDLLSRD*
Ga0066691_100666642	3300005586	Soil	VTGYAETPRTKNVLSQSIDLRKKIGFWSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSDWTSSNQV*
Ga0066691_106552582	3300005586	Soil	DLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0066653_107803422	3300006791	Soil	RKRIGFWSSIVTEMARQTDELFGRTECVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0066665_107062681	3300006796	Soil	IGFWVSVVTEMARQMDQLFGTTESVCVTHKGLRMVTVPISGRRSLGLSLDRSADPDKTVLKIMTKFDLGSSN*
Ga0066659_106853612	3300006797	Soil	ARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD*
Ga0066659_110663581	3300006797	Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIIIKFDLASTD*
Ga0066659_111546931	3300006797	Soil	ARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0066660_101413052	3300006800	Soil	FWSSIVTEMGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV*
Ga0099793_100168261	3300007258	Vadose Zone Soil	GFWVSIITEMARQTDNLFGSTESICVTHKGLKMVTVPLSARRSLGLSLDRSADTEKIILKITAKFSLGPTV*
Ga0066710_1003969592	3300009012	Grasslands Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD
Ga0066710_1048287482	3300009012	Grasslands Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD
Ga0099829_100518154	3300009038	Vadose Zone Soil	RQTDQMFGSTEYVCFTHKGLKMVSVPLSTRRSLGLSLDRSADPDKIIPKIMAKFNLRTGV
Ga0066709_1043645271	3300009137	Grasslands Soil	SIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKRVTIPLSARRSLGLSLDRSADTEKIILKVMTKFDLGSSD*
Ga0134088_100222203	3300010304	Grasslands Soil	MARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRAADTEKLILKIMTKFDLASSN*
Ga0134086_103881111	3300010323	Grasslands Soil	IVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0134080_100533461	3300010333	Grasslands Soil	SIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLVRSADTEKIILKIMTKFDLASTD*
Ga0134071_100710904	3300010336	Grasslands Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0137392_107366011	3300011269	Vadose Zone Soil	SDLRKQVGFWVSIVTQMARQIDQMFGSTEYVCFTHKGLEMVSVPLSARRSLGLSLDRSADPDKIIPKIMARFDFGPSV*
Ga0137391_106293151	3300011270	Vadose Zone Soil	SFAEAARTKNAFGQSSDLRKQVGFWVSIVTQMARQTDQIFGSTEYVCFTHKGLKMVSVPLSARRSLGLSLDRSADPDKIIPKIMAKFDFGPSV*
Ga0137393_105573182	3300011271	Vadose Zone Soil	IVTQMARQTDQIFGSTEYVCFTHKGLKMVSVPLSARRSLGLSLDRSADPDKIIPKIMAKFDFGPSV*
Ga0137388_118445961	3300012189	Vadose Zone Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSERRSLGLSLDRSADTEKIILKIMTKFDLASSN*
Ga0137364_100561451	3300012198	Vadose Zone Soil	QTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD*
Ga0137364_112742951	3300012198	Vadose Zone Soil	TDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0137383_106374541	3300012199	Vadose Zone Soil	EVTGYAETVRTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRTADTEKIILKIMTKFDLASSN*
Ga0137383_110056291	3300012199	Vadose Zone Soil	EVTGYAETVRTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTH*
Ga0137383_112611751	3300012199	Vadose Zone Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0137380_102421942	3300012206	Vadose Zone Soil	VLSQSSDLRKKVGFWASIVTEMDRQTDNLFGSTEYICITHKGLKMVTIPLSSRRSLGLSLDRSADPDNIILKILRKFDLTSSD*
Ga0137380_105495921	3300012206	Vadose Zone Soil	KRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFGLGSSD*
Ga0137380_107737801	3300012206	Vadose Zone Soil	EAARTKNAFSQSSDLRKQVGFWSSIVTQMARQTDQIFGSTGYVCFTHKGLKMVSVPLSARRSLGLSLDRSADPDKIIPKIMAKFDFGPSV*
Ga0137376_108264531	3300012208	Vadose Zone Soil	RKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASSD*
Ga0137379_117557352	3300012209	Vadose Zone Soil	DLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSTD*
Ga0137370_107900151	3300012285	Vadose Zone Soil	AFIQGAEVTGYAETVRTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASSN*
Ga0137387_100149642	3300012349	Vadose Zone Soil	MDRQTDNLFGSTEYICITHKGLKMVTIPISSRRSLGLSLDRSADPDNIILKILRKFDLTSSD*
Ga0137387_110485911	3300012349	Vadose Zone Soil	SDAAIRVAAFIQGAEVTGYAETVRTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRTADTEKIILKIMTKFDLASSN*
Ga0137372_1000434517	3300012350	Vadose Zone Soil	MARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD*
Ga0137386_102123282	3300012351	Vadose Zone Soil	TVRTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRTADTEKIILKIMTKFDLASSN*
Ga0137386_109106242	3300012351	Vadose Zone Soil	DLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKVILKIMTKFGLGSSD*
Ga0137386_109482982	3300012351	Vadose Zone Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSTD*
Ga0137384_108369291	3300012357	Vadose Zone Soil	GAEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD*
Ga0137361_109842372	3300012362	Vadose Zone Soil	KNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRPADTEKIIQKIMTKFDLLSRD*
Ga0137361_113921021	3300012362	Vadose Zone Soil	RQTDNLFGSTESICVTHKGLKMVTVPLSARRSLGLSLDRSADTEKIILKITAKFSLGPTV
Ga0137390_109815321	3300012363	Vadose Zone Soil	IVTQMARQTDQMFGSTEYVCFTHKGLKMVSVPITSRRSLGLSLDRSADPDKIIMKIMAKFDLGPGV*
Ga0134046_10356121	3300012386	Grasslands Soil	MARQTDELFGSTEYVLITHKGLKMVTIPLSARRSLGLSLDRTADTEKIILKIMTKFDLASSN*
Ga0137418_100393481	3300015241	Vadose Zone Soil	VLSQSGDLRKKVGFWVSIVTEMARQTDQMFGDTEYVCVAHKGLKMVTVPVSAGRSLGLSLDRSADPDKIILKIMAKLDLRRSV*
Ga0134083_100866352	3300017659	Grasslands Soil	ETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRAADTEKLILKIMTKFDLASSN
Ga0066667_100108234	3300018433	Grasslands Soil	VLRQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLSLSLDRSADTEKIILKIMTKFDLASTD
Ga0066662_119379962	3300018468	Grasslands Soil	FWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLASTD
Ga0066662_122359051	3300018468	Grasslands Soil	QSGDLQKKIGFWVSVVTEMARQMDQLFGTTESVCVTHKGLRMVTVPVSGRRSLGLSLDRSADPDKMILKIMTKFDLASSN
Ga0215015_101419963	3300021046	Soil	MFGNTEYVCFTHKGLKMVSVPLSARKSLGLSLDRSADPDKIVLKIMTKFSLGPTV
Ga0210404_102565183	3300021088	Soil	RQTDQLFGGTEYVCVAHKGLKMVTVPVSARRSLGLSLDRSADPDKIIPKIMAKFDLRTSV
Ga0209234_10029144	3300026295	Grasslands Soil	MARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLAPTD
Ga0209236_11256572	3300026298	Grasslands Soil	AIRVAAFIEGAEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLASSD
Ga0209469_10037107	3300026307	Soil	DLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLASTD
Ga0209239_10855302	3300026310	Grasslands Soil	VLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLAPTD
Ga0209761_10354053	3300026313	Grasslands Soil	AFIEGAEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLASSD
Ga0209471_11920881	3300026318	Soil	TDELFGNTEYVLVTHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV
Ga0209471_12277451	3300026318	Soil	GFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTISLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD
Ga0209267_11232471	3300026331	Soil	VLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLSLSLDRSADTEKIILKIMTKFDLASTD
Ga0209267_11676222	3300026331	Soil	AEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTQMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIIIKFDLASTD
Ga0209803_10391901	3300026332	Soil	RKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLSLSLDRSADTEKIILKIMTKFDLASTD
Ga0209803_12177033	3300026332	Soil	RQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD
Ga0209377_12582551	3300026334	Soil	DPSIRVAAFIEGAEVTGYAETARTKNVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD
Ga0209377_13170401	3300026334	Soil	GFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD
Ga0209159_11675351	3300026343	Soil	ARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSS
Ga0209690_11841883	3300026524	Soil	LFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLASTD
Ga0209806_11595992	3300026529	Soil	SIDLRKKIGFWSSIVTEMGRQTDELFGNTEYVLVTHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV
Ga0209806_12114691	3300026529	Soil	MGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKSDLG
Ga0209806_12156991	3300026529	Soil	MGRQTDELFGNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSDWTSSNQV
Ga0209807_11608262	3300026530	Soil	NVFGQSGDLQKKIGFWVSVVTEMARQMDQLFGTTESVCVTHKGLRMVTVPVSGRRSLGLSLDRSADPDKMILKIMTKFDLASSN
Ga0209160_10220081	3300026532	Soil	SDPTIRVAAFIEGAEVTGYAETPRTKNVLSRSIDLRKKIGFWVSIITEMARQTDELFGSTEYVLITHKRLKMVTIPLSARRSLGLSLDRAADTEKLILKIMTKFDLASSN
Ga0209056_100532933	3300026538	Soil	VLRQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFDLAPTD
Ga0209161_101470902	3300026548	Soil	VLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSGRRSLGLSLDRSADTEKIILKIMTKFGLGSSD
Ga0209577_100149423	3300026552	Soil	MARQMDQLFGTTESVCVTHKGLRMVTVPVSGRRSLGLSLDRSADPDKMILKIMTKFDLASSN
Ga0209588_11038051	3300027671	Vadose Zone Soil	MARQTDQLFGGTEYVCVAHEGLKMVTVPVSARRSLGLSLDRSADPDKIIPMIKAKFDLRRSV
Ga0209689_10777193	3300027748	Soil	MARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLGSSD
Ga0209689_11019982	3300027748	Soil	GNTEYVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLAPTD
Ga0209689_13309502	3300027748	Soil	GNTEYVLITHKGLKMVTIPLSARRSLGLSLDRLADTEKIILKIMTKFVLGSNDWTSSNQV
Ga0209689_13550552	3300027748	Soil	MARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIITKFDLASTD
Ga0209701_100682462	3300027862	Vadose Zone Soil	QSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLRSND
Ga0209283_100298531	3300027875	Vadose Zone Soil	NVLSQSIDLRKRIGFWSSIVTEMARQTDELFGRTESVLITHKGLKMVTIPLSARRSLGLSLDRSADTEKIILKIMTKFDLRSND
Ga0209283_106783842	3300027875	Vadose Zone Soil	FWSSIVTQMARQTDQIFGSTEYVCFTHKGLKMVSVPLSARRSLGLSLDRSADPDKIIPKIMAKFDFGPSV
Ga0307479_114986391	3300031962	Hardwood Forest Soil	TDIARQTDNLFGNTESICVTHKGLRMVTVPLSARKSLGLSLDRAADPDKIILKIMTRFSLGSAF
Ga0307479_117247942	3300031962	Hardwood Forest Soil	LSQSGDLRKKIGFWVSVVTDMARETDKLFGSTESICVTHKGLRMVTAPLSARRFLGLSLDRSADPDKILQKIMTSFRLGSTL
Ga0307472_1001863591	3300032205	Hardwood Forest Soil	EVTGYAESLRTNKVLSQSGDLRKKIGFWVSVVTDMAGETDQLFGSTESICVTHKGLRMVTAPIAARRYLGLSLDRSADPDKILLKIMTNFRLASTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074687

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences