Metagenome / Metatranscriptome Family F074649

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074649
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	90 residues
Representative Sequence	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQKARLKQEPWLCAEIACAEGEEIALKSEHPD
Number of Associated Samples	95
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.67 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.319 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.210 % of family members)
Environment Ontology (ENVO)	Unclassified (30.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.378 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 8.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF16576	HlyD_D23	19.33
PF13437	HlyD_3	3.36
PF00535	Glycos_transf_2	2.52
PF12700	HlyD_2	2.52
PF00072	Response_reg	0.84
PF08448	PAS_4	0.84
PF07730	HisKA_3	0.84
PF02915	Rubrerythrin	0.84
PF12146	Hydrolase_4	0.84
PF00494	SQS_PSY	0.84
PF12833	HTH_18	0.84
PF02518	HATPase_c	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.84
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.84
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.84
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.84
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.20 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.24 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.20 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	86.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.20 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.20 %
Unclassified	root	N/A	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004798\|Ga0058859_11279956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300004798\|Ga0058859_11481217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300004801\|Ga0058860_11855568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300004801\|Ga0058860_12104751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300005172\|Ga0066683_10425313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	818	Open in IMG/M
3300005186\|Ga0066676_10713524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300005187\|Ga0066675_10790124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005365\|Ga0070688_100163941	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300005440\|Ga0070705_101174893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300005445\|Ga0070708_100133597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2298	Open in IMG/M
3300005446\|Ga0066686_10905205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005450\|Ga0066682_10729170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300005451\|Ga0066681_10268427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300005451\|Ga0066681_10760342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300005471\|Ga0070698_101507466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300005518\|Ga0070699_100575667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1026	Open in IMG/M
3300005536\|Ga0070697_100413910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1171	Open in IMG/M
3300005544\|Ga0070686_101581722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300005544\|Ga0070686_101758916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300005553\|Ga0066695_10349642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	926	Open in IMG/M
3300005555\|Ga0066692_10987453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005569\|Ga0066705_10252134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300005576\|Ga0066708_10380175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300005586\|Ga0066691_10486900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300005598\|Ga0066706_10246709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1389	Open in IMG/M
3300005615\|Ga0070702_100372216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1013	Open in IMG/M
3300005617\|Ga0068859_100210830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2029	Open in IMG/M
3300006034\|Ga0066656_10495989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300006046\|Ga0066652_100267890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1503	Open in IMG/M
3300006046\|Ga0066652_101712020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300006796\|Ga0066665_10051531	All Organisms → cellular organisms → Bacteria → Proteobacteria	2838	Open in IMG/M
3300006797\|Ga0066659_10827490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300009012\|Ga0066710_100388308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2077	Open in IMG/M
3300009012\|Ga0066710_104894545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300009090\|Ga0099827_11971594	Not Available	508	Open in IMG/M
3300009094\|Ga0111539_10083193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3764	Open in IMG/M
3300009094\|Ga0111539_10308542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1841	Open in IMG/M
3300009137\|Ga0066709_100030720	All Organisms → cellular organisms → Bacteria	5688	Open in IMG/M
3300009137\|Ga0066709_100578416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1596	Open in IMG/M
3300009137\|Ga0066709_101668531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300009156\|Ga0111538_10057254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4979	Open in IMG/M
3300009156\|Ga0111538_14027847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300009162\|Ga0075423_10644905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1117	Open in IMG/M
3300010322\|Ga0134084_10359623	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010397\|Ga0134124_11100536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300010399\|Ga0134127_10566545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300010399\|Ga0134127_11676096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300010401\|Ga0134121_12149299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300011400\|Ga0137312_1008027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300012199\|Ga0137383_10086422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2269	Open in IMG/M
3300012200\|Ga0137382_10304854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1112	Open in IMG/M
3300012200\|Ga0137382_10651106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300012202\|Ga0137363_10724948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	842	Open in IMG/M
3300012204\|Ga0137374_10368165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300012204\|Ga0137374_10633094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300012206\|Ga0137380_10231190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1671	Open in IMG/M
3300012209\|Ga0137379_10024235	All Organisms → cellular organisms → Bacteria	5830	Open in IMG/M
3300012211\|Ga0137377_11133966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300012349\|Ga0137387_10109252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1937	Open in IMG/M
3300012350\|Ga0137372_10943269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300012351\|Ga0137386_10571336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300012351\|Ga0137386_10879497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300012353\|Ga0137367_10444402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300012354\|Ga0137366_10306090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1169	Open in IMG/M
3300012357\|Ga0137384_10617221	Not Available	884	Open in IMG/M
3300012357\|Ga0137384_11330353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012358\|Ga0137368_10744785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012362\|Ga0137361_10269565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1554	Open in IMG/M
3300012363\|Ga0137390_10923017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300012532\|Ga0137373_10171503	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300012532\|Ga0137373_10329515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1205	Open in IMG/M
3300012683\|Ga0137398_10851863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300012685\|Ga0137397_10766359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300012929\|Ga0137404_10236490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1562	Open in IMG/M
3300012930\|Ga0137407_10672323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300014157\|Ga0134078_10367169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300014166\|Ga0134079_10392929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300015053\|Ga0137405_1344310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4033	Open in IMG/M
3300015264\|Ga0137403_10319946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1443	Open in IMG/M
3300015371\|Ga0132258_10322051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3811	Open in IMG/M
3300015374\|Ga0132255_102149133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300017659\|Ga0134083_10529735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300017659\|Ga0134083_10532657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300018071\|Ga0184618_10183006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300018468\|Ga0066662_10470640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1133	Open in IMG/M
3300018469\|Ga0190270_12567798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300019888\|Ga0193751_1121757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300020005\|Ga0193697_1040095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300020005\|Ga0193697_1093289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300021080\|Ga0210382_10112945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1141	Open in IMG/M
3300025910\|Ga0207684_11637303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300025936\|Ga0207670_10121787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1897	Open in IMG/M
3300026324\|Ga0209470_1311637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300026538\|Ga0209056_10048877	All Organisms → cellular organisms → Bacteria	3804	Open in IMG/M
3300026538\|Ga0209056_10325464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1035	Open in IMG/M
3300027903\|Ga0209488_10927956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300030986\|Ga0308154_112630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300030990\|Ga0308178_1061517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300030990\|Ga0308178_1090014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300031081\|Ga0308185_1036631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300031093\|Ga0308197_10175232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300031093\|Ga0308197_10363856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300031095\|Ga0308184_1063612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300031099\|Ga0308181_1033096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300031099\|Ga0308181_1038922	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300031099\|Ga0308181_1124805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300031114\|Ga0308187_10229366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300031124\|Ga0308151_1041313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300031170\|Ga0307498_10479382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300031231\|Ga0170824_100308420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300031421\|Ga0308194_10387103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300031422\|Ga0308186_1038772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300031424\|Ga0308179_1050787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300031424\|Ga0308179_1060303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300031469\|Ga0170819_11462488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300034644\|Ga0370548_005978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1507	Open in IMG/M
3300034676\|Ga0314801_154121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300034680\|Ga0370541_043855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300034681\|Ga0370546_081803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.92%
Host-Associated	Host-Associated	10.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.39%
Plants	Host-Associated → Plants	6.72%
Human	Host-Associated → Human	3.36%
Aquatic	Environmental → Aquatic	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.20%
Digestive System	Host-Associated → Human → Digestive System	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Sediment	Environmental → Aquatic → Sediment	1.68%
Freshwater	Environmental → Aquatic → Freshwater	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.15%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.36%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058859_112799562	3300004798	Host-Associated	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWNNSGPERHTPEDRPRSASEAERLASDQIQRARLKQEPWLCAEIARPEGEEIALESD*
Ga0058859_114812171	3300004798	Host-Associated	MRTRSSEEIVINGVRYNLSIRLEKRWSYHAEWWNNSGPHEPVSDYRVRSASEAEQEASDEIQKARLKKEPWLCAEIARAEGEEVMLKP*
Ga0058860_118555681	3300004801	Host-Associated	MRARSPEEIVINGVRYNVSIRLEKRWSYHAEWWNNSGPHEPVSDYRVRSASEAEQEASDEIQKARLKKEPWLCAEIARAEGEEVMLKP*
Ga0058860_121047512	3300004801	Host-Associated	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWNNSGPERHTPEDRPRSASEAERLASDQIQRARLKQEPWLCAEIARTEGEEIPLESNPRCTEPG*
Ga0066683_104253131	3300005172	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDQIQRARLKQEPWLCAEIACGEGEEIALKSEHLD*
Ga0066676_107135242	3300005186	Soil	MCTRRSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSASNAEQQASHEIQKARLTKEPWLCAEIARVEGEE
Ga0066675_107901242	3300005187	Soil	MRSSNPEAIVINGIRYNLSIRRETRWSYHPEWWNTSGSYKHTADDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTA*
Ga0070688_1001639411	3300005365	Switchgrass Rhizosphere	EEIVINGVRYNLSIRLERRWSYNAEWWNNSGPERHTPEDRPRSASEAERLASDQIQRARLKQEPWLCAEIARPEGEEIALESD*
Ga0070705_1011748932	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWTHSGPDRHTPEDRVRFASEAERRASDQIQRARLKQEPWLCAEIARTEGEEIPLESNPRCTEPG*
Ga0070708_1001335971	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QSAKPRLTRKVEIVLMRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIALKSEHAD*
Ga0066686_109052051	3300005446	Soil	MRTRSPEEIVINGVRYNLSIRLQTRWSYHADWWNNSGACGHAPDDRVRSASEAERQASDAIQKARLTKEPWLCAEIARAEGEEVTLKSEHRD*
Ga0066682_107291701	3300005450	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGAYKHTPNDRVRSASEAERQASDQIQRARLKQEPWLCAEIACGEGEEIALKSEH
Ga0066681_102684272	3300005451	Soil	MLARTPQEIVINGVRYNLSIRLETRWSYQAEWWNNSGAHRLESDDRVRAASEAERQASDEIHKARLRHEPWLCAEIACVDG
Ga0066681_107603421	3300005451	Soil	MRTHSPEEIVINGVRYNLSIRLETRWSYEAEWWNKSGSHGHAPEDRVRSASEAEEQASDEIQKARLTKEPWLCAEIARADAEEVILKTERHD*
Ga0070698_1015074663	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLMRSNSPEEIVINGVRYNLSIRLETRWSYRAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD*
Ga0070699_1005756672	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LTRKVEVVLMRSSNPEAIVINGIRYNLSLRRETRWSYHPEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIALKSEHAD*
Ga0070697_1004139102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNSPEEIVINGVRYNLSIRLETRWSYRAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD*
Ga0070686_1015817221	3300005544	Switchgrass Rhizosphere	INGVRYNLSIRLERRWSYNAEWWTNSGADGHTPDDRVRLASEAERRARDQIQRARLKQEPWLCAEIARAEGEEIALESD*
Ga0070686_1017589162	3300005544	Switchgrass Rhizosphere	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWNNSGPERHTPEDRPRSASEAERLASDQIQRARLKQEPWLCAEIA
Ga0066695_103496423	3300005553	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGAYKHTPNDRVRSASEAERQASDQIQRARLKQEPWLCAEIACGEGEEIALKSEHLD*
Ga0066692_109874531	3300005555	Soil	LTRKVEFVLMRTRSPEEIVINGVRYNLSIRLETRWSYLAEWWNNSGSHGHASEDRLRSGSEAERQASDEIQKARLTKEPWLCAEIARAEGEDVMLKAEHHN*
Ga0066705_102521342	3300005569	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTGGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACGEGEEIALKSEHFD*
Ga0066708_103801753	3300005576	Soil	MRTSSPEEIVINGVRYNLSIRVETRWRYHAEWWNASGPYNHTPDDRVRSTSEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTA*
Ga0066691_104869003	3300005586	Soil	MCTRRSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSPSNAEQQASHEIQKARLTKEPWLCAEIARAEGE
Ga0066706_102467092	3300005598	Soil	MRTHSPEEIVINGVRYNLSIRLETRWSYEAEWWNKSGSHGHAPEDRVRWASEAEEQASDEIQKARLTKEPWLCAEIARAEAEDVMLKTEHHD*
Ga0070702_1003722161	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	KVEFVLMRARNPEEIVINGVRYNLSIRLERRWSYNAEWWTHSGPDRHTPEDRVRFASEAERRASDQIQRARLKQEPWLCAEIARTEGEEIPLESNPRCTEPG*
Ga0068859_1002108301	3300005617	Switchgrass Rhizosphere	IVINGVRYNLSIRLERRWSYNAEWWTHSGPDRHTPEDRVRFASEAERRASDQIQRARLKQEPWLCAEIARPEGEEIALESD*
Ga0066656_104959892	3300006034	Soil	EIVINGVRYNLSIRLETRWSYHAEWCNNSGSYGHTPEDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGDEVMLKAEHPD*
Ga0066652_1002678902	3300006046	Soil	MRTRSSEEIVINGVRYNLSIRLEKRWSYHAEWWNNSGPHEPVSDYRVRSASDAEQQASDEIQKARLKKEPWLCAEIARAEGEEVMLKP*
Ga0066652_1017120202	3300006046	Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHAEWWNDSGARAHAPEDRVRTASEAEQQASHEIQKARLTKEPWLHAEIALVEAEEVMLNSDHRD*
Ga0066665_100515312	3300006796	Soil	MHTRSPEEIVINGVRYNLSIRLETRWSYEAEWWNKSRSHGHAAEDRVRSASEAEEQASDEIQKARLTKEPWLCAEIARADAKEVMLKTEHHD*
Ga0066659_108274901	3300006797	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTGGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTA*
Ga0066710_1003883082	3300009012	Grasslands Soil	MCTRRSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSPSKAEQQASHEIQKARLTKEPWLCAEIARVEGEEALLQLDHRD
Ga0066710_1048945451	3300009012	Grasslands Soil	MRTRSPEEIVINGVRYNLSIRLQTRWSYHADWWNNSGACGHAPDDRVRSASEAERQASDAIQKARLTKEPWLCAEIAR
Ga0099827_119715941	3300009090	Vadose Zone Soil	MRSSNPEAIVINGIRYNLSIRRETHWSYPTEWWNTSGPYQHTPDDCVRSVSESERQASDEIQKARLTKEPWLCAEIARADVEE
Ga0111539_100831932	3300009094	Populus Rhizosphere	MRTRSPEEIVINGVRYNLSIRLETLWSHHAEWCNRGSHAHASEDRVRSASEAEREASHEIQKARFTKEPWLCAEIARVEAEDAMLNSEHHD*
Ga0111539_103085423	3300009094	Populus Rhizosphere	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWTNSGADGHTPDDRVRLASEAERRARDQIQRARLKQEPWLCAEIARAEGDEIALESD*
Ga0066709_1000307202	3300009137	Grasslands Soil	MCTRRSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSPSNAEQQASHEIQKARLTKEPWLCAEIARVEGEEVLLQSEHCD*
Ga0066709_1005784161	3300009137	Grasslands Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHAEWCNNSGSYGHTPEDRVRSASEAERQASDEIQKAHLTKEPWLCAEIARGEGDEVMLKAEHPD*
Ga0066709_1016685311	3300009137	Grasslands Soil	MRTSSPEEIVINGVRYNLSIRVETRWRYHAEWWNASGPYNHTPDDRVRSTSEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTP*
Ga0111538_100572544	3300009156	Populus Rhizosphere	MRTRSPEEIVINGVRYNLSIRLETLWSYHAEWWNESGSRAQAPEDRVRSASEAEREASHEIQKARLTKEPWLCAEIARVEAEDAMLNSEHHD*
Ga0111538_140278471	3300009156	Populus Rhizosphere	MRTRSPEEIVINGVRYNLSIRLEKRWSYHAEWWNNSEPHEHVSDYRVRSASEAEQQASDEIQKARLKKEPWLCAEIALAEGEEVMLKP*
Ga0075423_106449052	3300009162	Populus Rhizosphere	LCIRLETLWSYDAEWCNNRESHGHASEDRVGSASEAERQASHEIQKARLSKEPWLYAEIACAEAEEMTLNSEPRIEIESI*
Ga0134084_103596231	3300010322	Grasslands Soil	NGVRYNLSIRAETRWRYHAEWWNASGPYNHTPDDRVRSTSEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTA*
Ga0134124_111005362	3300010397	Terrestrial Soil	MRARSPEEIVINGVRYNVSIRLEKRWSYHAEWWNNSGPPGHVSEYRVRSGSEAEQQASDEIQRARLKKEPWLCAEIALAEGEEVMLKP*
Ga0134127_105665452	3300010399	Terrestrial Soil	MRTRSPEEIVINGVRYNLSIHLETRWSYDAEWWNERGSRAHAPDDRVRSASEAEREAIHEIQKARLTKEPWLCAEIACVESEMLNPEHPD*
Ga0134127_116760961	3300010399	Terrestrial Soil	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWTHSGPDRHTPEDRVRFASEAERRASDQIQRARLKQEPWL
Ga0134121_121492992	3300010401	Terrestrial Soil	MLAHRPEEIVINGVRYNLSIRLETRWSYQAEWWNNSGAHRLATDDRLRSASEAERQASDEIHKARLRQEPWLCAEIACADGEEIALNSGQAD*
Ga0137312_10080272	3300011400	Soil	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWNTIGPDRHTPEDRVRSASEAEQRASDQIQRARLKQEPWLCAEIARAEGEEIALESD*
Ga0137383_100864222	3300012199	Vadose Zone Soil	MRTHSPEEIVINGVRYNLSIRLETRWSYEAEWWNKSGSHGHAAEDRVRSASEAEEQASDEIQKARLTKEPWLCAEIARADAEEVMLKTEHHD*
Ga0137382_103048541	3300012200	Vadose Zone Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHAEWWNDSGIRGHAPEDRVRTASEAEQQASHEIQKARLTKEPWLHAEIALVEAEEVMLNSDHRD*
Ga0137382_106511062	3300012200	Vadose Zone Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGSHRLAPDDRVRSASESERQASKEIHKARLKQEPWLCAEIARAEGEELALKSEHAD*
Ga0137363_107249482	3300012202	Vadose Zone Soil	MCTRRSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSPSKAEQQASHEIQKARLTKEPWLCAEIARVEGEEALLQLTTLTELTPI*
Ga0137374_103681652	3300012204	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTGGPYKHTPNDRVRSASEAERQASNEIQRARLKQEPWLCAEIACGEGEEIALKSEHPD*
Ga0137374_106330941	3300012204	Vadose Zone Soil	MRTRSSEEIVINGVRYNLSIRLETPWSYQAEWWNTSRFLEPAAEDRSASEAEEQASDEIQKARLTKEPWLCAEIAGAEAEEMMQSENHD*
Ga0137380_102311902	3300012206	Vadose Zone Soil	MRTRNSEEIVINGVRYNLSIRLETRWSYQAEWWTNSGSHGHAPDDRFRSASDAERQASDEIHKARLTKEPWLCAEIARADAEEVMLKTEHHD*
Ga0137379_100242356	3300012209	Vadose Zone Soil	MHTRSPEEIVINGVRYNLSIRLETRWSYEAEWWNKGRSHGHAAEDRVRSASEAEEQASDEIQKARLTKEPWLCAEIARADAEEVMLKTEHHD*
Ga0137377_111339663	3300012211	Vadose Zone Soil	MRTRNSEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDRVRSPSKAEQQASHEIQKARLTKEPWLCAEIARVEGEEVLLQLTTVTELTPI*
Ga0137387_101092522	3300012349	Vadose Zone Soil	MRTRSSEEIVINGVRYNLSIRVETRWSYHAEWWNAGGPYKHTHDDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEIRTP*
Ga0137372_109432691	3300012350	Vadose Zone Soil	MRTRNSEEIVINGVRYNLSIRLETRWTYQAEWWTNSGSHGHAPDDRFRSASDAERQASDEIHKARLTKEPWLCAEIARADAEEVILKTERHD*
Ga0137386_105713363	3300012351	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTGGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEIAEVRTP*
Ga0137386_108794972	3300012351	Vadose Zone Soil	MCTRRSEEIVINGVRYNLSFRLETRWSYQAEWWTNSGSHGHAPDDRFRSASDAERQASDEIHKARLTKEPWLCAEIARAEGEDVLVPLDL
Ga0137367_104444022	3300012353	Vadose Zone Soil	INGVRYNLSIRLETRWSYRAEWWNNSEPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD*
Ga0137366_103060902	3300012354	Vadose Zone Soil	MLARRPEEIVINGVRYNLSIRLETRWSYQPEWWNISGAHRLASDDRVRAASEAERQASDEIQKARLKQEPWLCAEIACADGEEIALNSAQAD*
Ga0137384_106172211	3300012357	Vadose Zone Soil	MRTSSPEAIVINGVRYNLSIRVETRWSYHAEWWNTGGPYKHTPNDRVRSASEAERQASNEIQRARLKQEPWLCAEIACAEGEEIALKSEHAD*
Ga0137384_113303531	3300012357	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRGRSASEAERQASDEIQRARLKQEPWLCAEI
Ga0137368_107447851	3300012358	Vadose Zone Soil	TRKVEIVLMRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTGGPYKLTPNDRVRSASEAERQASDEIQRARLRQEPWLCAEIACAEGEEIALKSEHPD*
Ga0137361_102695652	3300012362	Vadose Zone Soil	MRSSNPEAIVINGIRYNLSIRRETRWSYHPEWWNTSGPYQHTADDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEELMLK*
Ga0137390_109230172	3300012363	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACAEGEEFALKSEHAD*
Ga0137373_101715032	3300012532	Vadose Zone Soil	MRTRSSEEIVINGVRYNLSIRLETPWSYQAEWWNTSRFLEPAAEDRSASEAEEQASDEIQKARLTKEPWLCAEIAGTEAEEMMQSENHD*
Ga0137373_103295151	3300012532	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRLETRWSYRAEWWNNSEPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD*
Ga0137398_108518632	3300012683	Vadose Zone Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD*
Ga0137397_107663591	3300012685	Vadose Zone Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQKARLKQEPWLCAEIACAEGEEIALKSEHPD*
Ga0137404_102364901	3300012929	Vadose Zone Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHAEWWNDSGIRGHAPEDRVRTASEAEQQASHEIQKARLTKEPWLYAEIALVE
Ga0137407_106723232	3300012930	Vadose Zone Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYPAEWWNNSGPHRHAPEDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEEMMLK*
Ga0134078_103671691	3300014157	Grasslands Soil	MRTSSPEEIVINGVRYNLSIRVETRWRYHAEWWNASGPYNHTPDDRVRSTSEAERQASDEIQRARLKQEPWLCAEIACA
Ga0134079_103929292	3300014166	Grasslands Soil	MRTRNSEEIVINGIRYNLSIRLERRWSYNAEWWNNSGPERHTPGDRARSASEAEQLASDQIQRARLKQEPWLCAEIARPEEEEIALESD*
Ga0137405_13443105	3300015053	Vadose Zone Soil	MVFGINLSIRLETRWSYPAEWWNNSGPHRHAPEDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEDLMLKSEHRD*
Ga0137403_103199462	3300015264	Vadose Zone Soil	FNGVRYNLSIRLETRWSYHAEWWNTSGAYNHTPDDRVRSASEAERQASNEIQRARLKQEPWLCAEIACGEGEEIALKSEHAD*
Ga0132258_103220513	3300015371	Arabidopsis Rhizosphere	MHARNPEEIVINGVRYHLSIRLERRWSYNAEWWTNSRPDRHTPDDRVRSASEAERQACDQIQRARLKHEPWLCAEIARAEGEEIALESD*
Ga0132255_1021491332	3300015374	Arabidopsis Rhizosphere	EEIVINGVRYHLSIRLERRWSYNAEWWTNSRPDRHTPDDRVRSASEAERQACDQIQRARLKHEPWLCAEIARAEGEEIALESD*
Ga0134083_105297352	3300017659	Grasslands Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACGEGEEIALKS
Ga0134083_105326571	3300017659	Grasslands Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYQAEWWNNSGSQGDTADDHVRSPSKAEQQASHEIQKARLTKEPWLCAEIARVEGEEVLLQLEHRD
Ga0184618_101830061	3300018071	Groundwater Sediment	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACAECEEIALKSEHAD
Ga0066662_104706402	3300018468	Grasslands Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTSGPYKHTPNDRVRSPSNAEQQASHEIQKARLTKEPWLCAEIARVEGEEVLLQLEHCD
Ga0190270_125677981	3300018469	Soil	LQSAKPRLTRKVEIVLIRSRSPEEIVINGVRYNLSIRLETRWSYRAEWWNTSGPYKQAPDDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEEIALKSEHPD
Ga0193751_11217572	3300019888	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD
Ga0193697_10400951	3300020005	Soil	MRTHSPEEIVINGVRYNLSIRLETRWHYHAEWWNKSGSHGHAPDDRVRSASEAERQASDEIQKARLTKEPWLRAEVARAEGEDLMLKSEHHD
Ga0193697_10932891	3300020005	Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYQAEWWNNNGPHGHVSDHRVRSASEAEQQASDEIQKARLKKEPWLYAEIARAE
Ga0210382_101129452	3300021080	Groundwater Sediment	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNNSGPHKHTPYDCVRSASESEQQASDEIQKARLKQEPWLCAEIACADGEEFALKSEHAD
Ga0207684_116373031	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSSPEEIVINGVRYNLSIRLETRWSYHAEWWNTSGPYKHTPNDCVRSSSEAERQASDEIQKARLKQEPWLCAEIACAEVGTR
Ga0207670_101217873	3300025936	Switchgrass Rhizosphere	MRARNPEEIVINGVRYNLSIRLERRWSYNAEWWNNSGPERHTPEDRPRSASEAERLASDQIQRARLKQEPWLCAEIARPEGEEIALESD
Ga0209470_13116371	3300026324	Soil	MRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACGEGEEIALKSEHADCD
Ga0209056_100488772	3300026538	Soil	MHTRSPEEIVINGVRYNLSIRLETRWSYEAEWWNKSRSHGHAAEDRVRSASEAEEQASDEIQKARLTKEPWLCAEIARADAEEVMLKTEHHD
Ga0209056_103254642	3300026538	Soil	GVQVQSAKPRLTRKVEIVLMRTSSPEEIVINGVRYNLSIRVETCWSYHAEWWNTSGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIACGEGEEIALKSEHAD
Ga0209488_109279561	3300027903	Vadose Zone Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNESGTRGQAPEDRVRSASEAEQQASDEIQKARLTKEPWLCAEIARAEGEEI
Ga0308154_1126302	3300030986	Soil	MRSNSSEEIVINGVRYNLSIRLETRWSYHSEWNNSGSRGHAPDDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEEIALKSEHPD
Ga0308178_10615172	3300030990	Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNNSGPHKHTPYDCVRSASESEQQASDEIQKARLKQEPWLCAEIAR
Ga0308178_10900142	3300030990	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYRAEWWNNSGPHRHAHDDRVRSASESERQASEEIQKAHLKQEPWLCAEIACADGAEFALKSEHAD
Ga0308185_10366311	3300031081	Soil	MRTRSPEEIVINGVRYNLSIRLETRWRYQAEWWNNRGSHGHAPDDRVRSASEAERQANDEIQKARLTKEPWLCAEIARAEGEDLMLKSDAMLELAPI
Ga0308197_101752321	3300031093	Soil	MRTRSPQEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHGHVPDYRVRSASEAEQQASDEIQKARLRKEPWLCAEIARAEGEEVMLKP
Ga0308197_103638562	3300031093	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHRLAPDDRVRSASESERQASEEIQKARLKQEPWLCAEIACAEGDEIALKSEHPD
Ga0308184_10636122	3300031095	Soil	MRSNSPEEIVINGVRYNLSIRLETSWSYHAEWWNTSGPYKNTPDDRIRSASEAERQASGEIQRARLKQEPWLCAEIARAEGEE
Ga0308181_10330962	3300031099	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYRAEWWNNSGPHSHAHDDRVRSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD
Ga0308181_10389222	3300031099	Soil	MRTRSPQEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHGHVADYRVRSASEAEQQASDEIQKARLRKEPWLCAEIARAEGEEVMLKS
Ga0308181_11248052	3300031099	Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHSEWWNNSGSRGHAPDDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEEIALKSEHPD
Ga0308187_102293662	3300031114	Soil	MRTRSPQEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHGHVADYRVRSASEAEQQASDEIQKARLRKEPWLCAEIARAEGEEVMLKP
Ga0308151_10413132	3300031124	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPHKHTPYDCVRSASESERQASDEIQKARLKQEPWLCAEIAR
Ga0307498_104793822	3300031170	Soil	KVEFVLMRTRSPEEIVINGVRYNLSIRLETRWSYHAEWWNDSGTRAHAPEDRVRTTSEAEQQASHEIQKARLTKEPWLYAEIALVEAEEVMLNSDHRD
Ga0170824_1003084202	3300031231	Forest Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWWNNSGPHRHAHDDRARSASESERQASEEIQKARLKQEPWLCAEIACADVEEFALKSEHAD
Ga0308194_103871031	3300031421	Soil	MLARRPEEIVINGVRYNLSIRLETRWSYQAEWWNNSGAHRLASDDRVRSASEAERQASDEIQKARLRQEPWLCAEIAGADGEIALNSGQA
Ga0308186_10387722	3300031422	Soil	MRYNSPEEIVINGVRYNLSIRLETRWSYDAEWWTNSGSHAYASEDRVRSASEAERQASDEIQKARLTKEPWLCAEIARAEGEELMLKAEHRD
Ga0308179_10507871	3300031424	Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSVSRGHAPDDRVRSTSEAERQASDEIQKARLTKEPWLCAEIARAEGEDLMLKSEHHY
Ga0308179_10603032	3300031424	Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWNNSGPQQHTPYDCVRSASEAERQASDEIQKARLKQEPWLCAEIACAEGEEIAQKSEHAD
Ga0170819_114624882	3300031469	Forest Soil	MRSNSPEEIVINGVRYNLSIRLETRWSYHAEWWWNNSGPHRHAHDDRARSASESERQASEEIQKARLKQEPWLCAEIACADGEEFALKSEHAD
Ga0370548_005978_1_261	3300034644	Soil	EEIVINGVRYNLSIRLERGWSYHAEWWNTSGPYKHTTNDRVRSASEAERQASDEIQKARLKQEPWLCAEIACAEGDEIALKSEHPD
Ga0314801_154121_40_306	3300034676	Soil	MRTRSPEEIVINGVRYNLSIRLETRWSYQAEWWNNSGPHERVSDHRVRSASESEQQASDEIQKARLKKEPWLCAEIARAEGEEVMLKS
Ga0370541_043855_254_532	3300034680	Soil	MRTSSPEEIVINGVRYNLSIRVETRWSYHAEWWNTAGPYKHTPNDRVRSASEAERQASDEIQRARLKQEPWLCAEIASAEGDEIALKSERPD
Ga0370546_081803_11_289	3300034681	Soil	MRTRSPEEIVINGVRYNLSIRLETRWRYHAEWWNNSGSHGHAPEDRVRSASEAERLASDEIQKARLTKEPWLCAEIARAEGEDLMLKSEHHD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074649

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences