Metagenome Family F074633

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074633
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	93 residues
Representative Sequence	LGQPLIRVEILADSEGLKVRLGIAPSILTQVYARDGLGLFDRSTANVAVELRDQRDGRRLERQPVLVEFVPGSEDAEEYAPKFRPGSAFELA
Number of Associated Samples	78
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.99 %
% of genes near scaffold ends (potentially truncated)	24.37 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.210 % of family members)
Environment Ontology (ENVO)	Unclassified (27.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.83% β-sheet: 28.33% Coil/Unstructured: 65.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02771	Acyl-CoA_dh_N	3.36
PF07676	PD40	2.52
PF04185	Phosphoesterase	1.68
PF12840	HTH_20	1.68
PF00999	Na_H_Exchanger	1.68
PF05988	DUF899	1.68
PF00313	CSD	1.68
PF00848	Ring_hydroxyl_A	1.68
PF13302	Acetyltransf_3	1.68
PF01037	AsnC_trans_reg	1.68
PF00072	Response_reg	1.68
PF13581	HATPase_c_2	0.84
PF13473	Cupredoxin_1	0.84
PF01381	HTH_3	0.84
PF11964	SpoIIAA-like	0.84
PF13229	Beta_helix	0.84
PF01208	URO-D	0.84
PF00574	CLP_protease	0.84
PF02779	Transket_pyr	0.84
PF00990	GGDEF	0.84
PF00484	Pro_CA	0.84
PF01872	RibD_C	0.84
PF02687	FtsX	0.84
PF07883	Cupin_2	0.84
PF08240	ADH_N	0.84
PF13240	zinc_ribbon_2	0.84
PF00202	Aminotran_3	0.84
PF02597	ThiS	0.84
PF14759	Reductase_C	0.84
PF13524	Glyco_trans_1_2	0.84
PF00702	Hydrolase	0.84
PF01569	PAP2	0.84
PF00106	adh_short	0.84
PF01642	MM_CoA_mutase	0.84
PF02604	PhdYeFM_antitox	0.84
PF01152	Bac_globin	0.84
PF13091	PLDc_2	0.84
PF00092	VWA	0.84
PF00196	GerE	0.84
PF02909	TetR_C_1	0.84
PF12680	SnoaL_2	0.84
PF08327	AHSA1	0.84
PF00353	HemolysinCabind	0.84
PF04075	F420H2_quin_red	0.84
PF05977	MFS_3	0.84
PF13439	Glyco_transf_4	0.84
PF00584	SecE	0.84
PF13570	PQQ_3	0.84
PF04134	DCC1-like	0.84
PF01435	Peptidase_M48	0.84
PF14333	DUF4389	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	3.36
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	3.36
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.68
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.68
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.68
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.68
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.68
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.68
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.68
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.84
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.84
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.84
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.84
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.84
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.84
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.84
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.84
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.84
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.84
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.84
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.84
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.52 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.52 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.68 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.84 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.84 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.52 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.68 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.84 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.52 %
unclassified Streptomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.84 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.97 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.52 %
Streptomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.84 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001537\|A2065W1_10060480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300002568\|C688J35102_120866161	Not Available	1897	Open in IMG/M
3300004114\|Ga0062593_102068549	Not Available	634	Open in IMG/M
3300004153\|Ga0063455_100092780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214	Open in IMG/M
3300004156\|Ga0062589_100355245	Not Available	1165	Open in IMG/M
3300004157\|Ga0062590_101037713	Not Available	783	Open in IMG/M
3300004480\|Ga0062592_100574681	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300004643\|Ga0062591_100055372	Not Available	2295	Open in IMG/M
3300004643\|Ga0062591_101795128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300005093\|Ga0062594_100582317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	975	Open in IMG/M
3300005093\|Ga0062594_101693522	Not Available	660	Open in IMG/M
3300005093\|Ga0062594_101848813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300005184\|Ga0066671_10513104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300005187\|Ga0066675_11029962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300005187\|Ga0066675_11166363	Not Available	573	Open in IMG/M
3300005457\|Ga0070662_101810592	Not Available	527	Open in IMG/M
3300005540\|Ga0066697_10187055	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1230	Open in IMG/M
3300005544\|Ga0070686_100898514	Not Available	720	Open in IMG/M
3300005544\|Ga0070686_101212689	Not Available	627	Open in IMG/M
3300005552\|Ga0066701_10044417	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300005558\|Ga0066698_10193657	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300005719\|Ga0068861_102630195	Not Available	507	Open in IMG/M
3300005764\|Ga0066903_100073459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4398	Open in IMG/M
3300005764\|Ga0066903_100276239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2628	Open in IMG/M
3300006046\|Ga0066652_100436864	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1201	Open in IMG/M
3300006046\|Ga0066652_101927738	Not Available	529	Open in IMG/M
3300006796\|Ga0066665_10666742	Not Available	826	Open in IMG/M
3300006852\|Ga0075433_11399034	Not Available	605	Open in IMG/M
3300006871\|Ga0075434_101866423	All Organisms → cellular organisms → Bacteria → Terrabacteria group	607	Open in IMG/M
3300009012\|Ga0066710_100427805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1980	Open in IMG/M
3300009012\|Ga0066710_100872976	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1383	Open in IMG/M
3300009012\|Ga0066710_101234457	Not Available	1159	Open in IMG/M
3300009012\|Ga0066710_101395250	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300009012\|Ga0066710_101622395	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300009012\|Ga0066710_102053863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300009012\|Ga0066710_102687582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300009088\|Ga0099830_10194508	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300009089\|Ga0099828_10549376	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300009090\|Ga0099827_10189368	Not Available	1706	Open in IMG/M
3300009090\|Ga0099827_10438885	Not Available	1118	Open in IMG/M
3300009137\|Ga0066709_100508216	Not Available	1698	Open in IMG/M
3300009137\|Ga0066709_101325364	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300009137\|Ga0066709_101603811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300009137\|Ga0066709_101737157	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300009137\|Ga0066709_101867597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	838	Open in IMG/M
3300009137\|Ga0066709_102005786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	802	Open in IMG/M
3300009137\|Ga0066709_102189853	Not Available	762	Open in IMG/M
3300009147\|Ga0114129_11028980	Not Available	1035	Open in IMG/M
3300009147\|Ga0114129_12606239	Not Available	603	Open in IMG/M
3300009156\|Ga0111538_12724370	Not Available	619	Open in IMG/M
3300010336\|Ga0134071_10195650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	996	Open in IMG/M
3300010336\|Ga0134071_10697590	Not Available	537	Open in IMG/M
3300010399\|Ga0134127_12845601	Not Available	563	Open in IMG/M
3300011270\|Ga0137391_11418477	Not Available	540	Open in IMG/M
3300012011\|Ga0120152_1000946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14679	Open in IMG/M
3300012019\|Ga0120139_1162299	Not Available	585	Open in IMG/M
3300012198\|Ga0137364_10517625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300012201\|Ga0137365_11335694	Not Available	507	Open in IMG/M
3300012204\|Ga0137374_10001293	All Organisms → cellular organisms → Bacteria	28277	Open in IMG/M
3300012204\|Ga0137374_10002749	All Organisms → cellular organisms → Bacteria	20653	Open in IMG/M
3300012204\|Ga0137374_10009881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11252	Open in IMG/M
3300012204\|Ga0137374_10074848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3314	Open in IMG/M
3300012206\|Ga0137380_10000214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38316	Open in IMG/M
3300012206\|Ga0137380_10215282	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300012207\|Ga0137381_11505790	Not Available	564	Open in IMG/M
3300012208\|Ga0137376_11700333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300012209\|Ga0137379_10816446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300012210\|Ga0137378_10001539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19492	Open in IMG/M
3300012210\|Ga0137378_10002484	All Organisms → cellular organisms → Bacteria	15829	Open in IMG/M
3300012210\|Ga0137378_10141435	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300012212\|Ga0150985_111863755	Not Available	1151	Open in IMG/M
3300012354\|Ga0137366_10361502	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012357\|Ga0137384_10594253	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012357\|Ga0137384_10594479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300012358\|Ga0137368_10298208	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300012359\|Ga0137385_11595102	Not Available	516	Open in IMG/M
3300012532\|Ga0137373_10115023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2324	Open in IMG/M
3300012532\|Ga0137373_10182414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1743	Open in IMG/M
3300012532\|Ga0137373_10374552	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012972\|Ga0134077_10172299	Not Available	872	Open in IMG/M
3300012972\|Ga0134077_10572207	Not Available	508	Open in IMG/M
3300012986\|Ga0164304_10737812	Not Available	753	Open in IMG/M
3300013501\|Ga0120154_1069034	Not Available	824	Open in IMG/M
3300013768\|Ga0120155_1190808	Not Available	545	Open in IMG/M
3300015371\|Ga0132258_10380198	Not Available	3502	Open in IMG/M
3300015371\|Ga0132258_10747173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2464	Open in IMG/M
3300015371\|Ga0132258_11631934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1627	Open in IMG/M
3300017959\|Ga0187779_10343510	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300017974\|Ga0187777_10241463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300017997\|Ga0184610_1177376	Not Available	707	Open in IMG/M
3300018056\|Ga0184623_10039252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2148	Open in IMG/M
3300018061\|Ga0184619_10006912	Not Available	4316	Open in IMG/M
3300018064\|Ga0187773_10896317	Not Available	572	Open in IMG/M
3300018075\|Ga0184632_10001524	All Organisms → cellular organisms → Bacteria	9490	Open in IMG/M
3300018076\|Ga0184609_10047111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1830	Open in IMG/M
3300018468\|Ga0066662_12286081	Not Available	568	Open in IMG/M
3300018482\|Ga0066669_10189192	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300018482\|Ga0066669_10970045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	765	Open in IMG/M
3300018482\|Ga0066669_10993462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	757	Open in IMG/M
3300021344\|Ga0193719_10310259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300025936\|Ga0207670_11635815	Not Available	548	Open in IMG/M
3300027875\|Ga0209283_10463637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300027882\|Ga0209590_10044554	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300027882\|Ga0209590_10562593	Not Available	734	Open in IMG/M
3300028807\|Ga0307305_10442016	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300028819\|Ga0307296_10683951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300028828\|Ga0307312_10454430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300028828\|Ga0307312_10878067	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300028878\|Ga0307278_10056586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1771	Open in IMG/M
3300028878\|Ga0307278_10065096	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300028878\|Ga0307278_10337057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300028881\|Ga0307277_10006400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4544	Open in IMG/M
3300028881\|Ga0307277_10149763	Not Available	1011	Open in IMG/M
3300028885\|Ga0307304_10259019	Not Available	759	Open in IMG/M
3300028889\|Ga0247827_11005034	Not Available	567	Open in IMG/M
3300030002\|Ga0311350_10835593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300032180\|Ga0307471_101893196	Not Available	746	Open in IMG/M
3300033550\|Ga0247829_10472358	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1037	Open in IMG/M
3300034377\|Ga0334931_168254	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.76%
Host-Associated	Host-Associated	9.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.55%
Plants	Host-Associated → Plants	9.24%
Aquatic	Environmental → Aquatic	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Peat	Environmental → Terrestrial → Peat	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.31%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2065W1_100604803	3300001537	Permafrost	MGQPLIRVEIVADNEGLKVRLVMAPSILNEVYAREGLGLFDRSTANAAVELRDTRDGRSFERQPALVEFVPGSEDAEEYASKFRPGSAFELSN*
C688J35102_1208661613	3300002568	Soil	MGQPLIRVEVVADDQGLKVRLAIAPSVLTEVYARDGLGMFDRDRANLVVDLRDHRTGRTFERRPLVVEFTPASEDAEEFAPKFRPGSALELEEP*
Ga0062593_1020685492	3300004114	Soil	RVEVVADDDGMKVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0063455_1000927801	3300004153	Soil	MGQPLIRIEVVADDDGLKVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDLRTGRSLERRPVVVEFAPAAEDAEEYAPKFRPGSAFELTGDG*
Ga0062589_1003552452	3300004156	Soil	MGQPLIRVEIVADDDGMKVQIAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDSRTGRSLERRPLLVEFSPAAEDAEEYAPKFRAGSAFELTDER*
Ga0062590_1010377132	3300004157	Soil	PLIRVEVVADDDGMKVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0062592_1005746811	3300004480	Soil	MGQPMIRIEVVANAEGMSVRLAIAPSILTEVYARDGLGLFDRATVNASVELADARDGRRFERQPLQVEFVPASEDAEEYAPKFRPGSAFELS*
Ga0062591_1000553724	3300004643	Soil	DGMRVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0062591_1017951282	3300004643	Soil	MGQPMIRIEVVANAEGMSVRLAIAPSILTEVYARDGLGLFDRATVNASVELADARDGRRFERQPLQVEFVPASEDAEEHAPKFRPGSAFELS*
Ga0062594_1005823172	3300005093	Soil	MGQPLIRVEVVADDDGMRVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0062594_1016935222	3300005093	Soil	MGQPMIRVEIVADGQGMQVRLAIAPSILTQVYARDGLGVFDRSTANVSVELHDKRDGRRLERQPALIEFVPASEDLDEYASTFRPGSAFELA*
Ga0062594_1018488131	3300005093	Soil	MGQPLIRVEVVAEADGLRVRLTIAPSILTQVYARDGLGLFDRSSANIAVELRDRRDGRCLERAPVSLEFSPGSEDAEDYVSKFRPGSAFELGPCP*
Ga0066671_105131042	3300005184	Soil	MGQPVIRVEIEADPNGLKVRLGIAPSILTQVYARDGLGLFDRSTANAAVELWDRRDGRRFERQPILVEFVPGAEDAEDYAPKFRPGSAFELA*
Ga0066675_110299621	3300005187	Soil	MGQPLIRIEVMADSEGLKVRLGIAPSILTQVYARDGLGLFDRATTNTVVELLDRRDGRRLERQPILVEFVPASEDAEDYAPKFRPGSAFELA*
Ga0066675_111663631	3300005187	Soil	MGQPLIRLEIVAEAEGLKIRLAIAPSILTQVYARDGLGLFDRSNANIAVELRDRRDDRCFERQPALFEFSLGAEDADEYASKFRPGSAFELGPCS*
Ga0070662_1018105921	3300005457	Corn Rhizosphere	MGQPMIRVEIVADGQGMQVRLAIAPSILTQVYARDGLGVFDRSTANVSVELHDKRDGRRLERQPALIEFVPASEDLDEYAST
Ga0066697_101870552	3300005540	Soil	MGQPLIRLEIVAEAEGLKVRMAIAPSILTQVYARDGLGLFDRSNANIAVELRDRRDDRCFERQPALFEFSPGAEDADEYASKFRPESAFELGPCS*
Ga0070686_1008985141	3300005544	Switchgrass Rhizosphere	MGQPLIRVEIVADDDGMKVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDSRTGRSLERRPLLVEFSPAAEDAEEYAPKFRAGSAFELTDER*
Ga0070686_1012126892	3300005544	Switchgrass Rhizosphere	MGQPLIRVEIVADDDGLRVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDQRTGGRLERRPLVVEFSPASEDADDYAPKFRPGSAFELTDPAG*
Ga0066701_100444172	3300005552	Soil	LGQPSIRIEVVADSEGLKVRLSVAPSILTQVYARGGLGLFGRSTANVAVELRDQRSGRGFERQPVVLEFVPGSEDAEEYAPMFRPGSAFELA*
Ga0066698_101936573	3300005558	Soil	VGQPMIRVEIVADDQGMKVRLAIAPSILTQVYARDGLGLFDRDSANVAVELHDRREGRRLERQPIALEFVPGSEDMDEYAPKFRPGSAFELS*
Ga0068861_1026301952	3300005719	Switchgrass Rhizosphere	EMGQPMIRVEIVADGQGMQVRLAIAPSILTQVYARDGLGVFDRSTANVSVELHDKRDGRRLERQPALIEFVPASEDLDEYASTFRPGSAFELA*
Ga0066903_1000734594	3300005764	Tropical Forest Soil	MGQPMIRIEVVANAEGMSVRLAIAPSILTQVYARDGLGLFDRATANAAVELTDARDGRRFERQPLRVEFVPASEDAEEYAPKFRPGSAFELA*
Ga0066903_1002762392	3300005764	Tropical Forest Soil	MGEGKPLVRIEVVADGEGLKVRLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDVRTGGSFERRPLVVEFTPASEDAEEFAPKFRPGSPFELGEA*
Ga0066652_1004368642	3300006046	Soil	LKVRLVIAPSIVTQVYARDGLGLFDRNTSNVAIELRDQRDGRRLERQPVVVEFAPGSEDLDEYASKFRPGSVFELS*
Ga0066652_1019277382	3300006046	Soil	VGQPMVRVEVVADDEGMKVRLAIAPSILTQVYARDGLGLFDRDSANLAVELHDRRNGRRLERQPIVLEFVPGSDDLDEYASKFRPGTPFELA*
Ga0066665_106667422	3300006796	Soil	MGQPLIRVEVVADADGMKVRLAIAPSILTEVYGRDGVGLFDRNTANLAVELRDHRDGRSLERRPLLVEFVPGSEDADEYAPKFRPGSAFELTGPEQTNRPESNP*
Ga0075433_113990342	3300006852	Populus Rhizosphere	VGEPLIHVEIVADSVGMKVRLGIAPSILTQVYARDGLGTFGRGNANLIVELRDQRDGRSLERQPAQLEFYPASEDADRFVSTFRPGSAFELA*
Ga0075434_1018664231	3300006871	Populus Rhizosphere	VGEPLIHVEIVADSVGMKVRLGIAPSILTQVYARDGLGTFDRSTANLVVELRDQRDGRSLERQPAQLEFYPASEDSDQFASTFGPGSAFELA*
Ga0066710_1004278052	3300009012	Grasslands Soil	VGQPMIRVEVVADTEGLKVRLAIAPSILTQVYARNGLGLFDRSTANVAVELRDQRDGRRLERQPVVVEFVPGSEDLDEYASKFRSGSTFELS
Ga0066710_1008729761	3300009012	Grasslands Soil	MGQPLIRLEIVAEAEGLKVRLAIAPSILTQVYARDGLGLFDRSNANIAVELRDRRDDRCFERQPALFEFSPGAEDADEYASKFRPGSAFELGPCS
Ga0066710_1012344573	3300009012	Grasslands Soil	MGQPLIRVEVVADDDGLKVRLAIAPSILTEVYARDGLGLFDRDNANLAVELRDRRDGRSLERRPVLVEFVPASEDAEEYAPQFRPGSALELS
Ga0066710_1013952503	3300009012	Grasslands Soil	VGQPIIRVEIVADDEGMKVRLAIAPSILTQVYARDGLGLFDRDSANVAVELHDRRDGRRLERQPIALEFVPGSEDMDEYAPKFRPGSAFELS
Ga0066710_1016223953	3300009012	Grasslands Soil	MGQPLIRIAVVAEADGLHVRLAIAPSILTQVYARDGLGLFDRSTANIAVELGDRRNGRCFERQPVVVEFGPGSEDAEEYASKF
Ga0066710_1020538632	3300009012	Grasslands Soil	MGQPLIRIEVMADSEGLKVRLGIAPSILTQVYARDGLGLFDRATTNTVVELLDRRDGRRLERQPILVEFVPASEDAEDYAPKFRPGSAFELA
Ga0066710_1026875822	3300009012	Grasslands Soil	VGQPMVRVEVVADDEGMKVRLAIAPSILTQVYARDGLGLFDRNSANLAVELHDRRNGRRLERQPIVLEFVPGSDDLDEYASKFRPGSPFELA
Ga0099830_101945083	3300009088	Vadose Zone Soil	MGQPLIRIEVVAEAEGLKVRLAIAPSILTQVYARDGSGLFDRSTTNIAVELEDRRDGRCFERQPVLLEFTPGAEDAEGYASKFRPGTAFELGPCP*
Ga0099828_105493761	3300009089	Vadose Zone Soil	MGQPLIRIEVVAEAEGLKVRLAIAPSILTQVYARDGSGLFDRSTANIAVELEDRRDGRCFERQPVLLEFTPGAEDAEEYASKFRPGTAFELGPCP*
Ga0099827_101893683	3300009090	Vadose Zone Soil	MGQPLIRIEVVAETDGLKVRLAIAPSILTQVYARSGLGLFDRSTANIAVELRDRRDGRSFERQPALLEFTPGAEDADEYASKFRPGSAFELGS*
Ga0099827_104388853	3300009090	Vadose Zone Soil	MIRVEIVADTEGMKVRLAIAPSILTQVYARDGLGLFDRSTANVAVELRDQRAGRRLERQPVALEFVPGSEDLDEYASKFRPGSAFELS*
Ga0066709_1005082161	3300009137	Grasslands Soil	MGQPVIRVEIEADPNGLKVRLGIAPSILTQVYARDGLGLFDRSTANAAVELWDRRDGRRFERQPILVEFVPGAEDAEDYAPKFRPGSAFEL
Ga0066709_1013253642	3300009137	Grasslands Soil	MIRVEIVAGDEGMKVRLAIAPSILTQVYARDGLGLFDRDSANVAVELHDRRDGRRLERQPNALEFVPGSEDMDEYAPKFRPGSAFELS*
Ga0066709_1016038112	3300009137	Grasslands Soil	MIRVEVVADDEGMKVRLAIAPSIPTHVYARDGLGLFDRDSANLAVELHDRRNGRRLERQPIVLEFVPGSDDLDEYASKFRPGTPFELA*
Ga0066709_1017371572	3300009137	Grasslands Soil	LIRVEVVGDSEGMKVRLGIAPSILTQVYVRDGVGAFDRSTANLAVELRDHRDGRHLERQPILLEFCPGSEDADEYATKFRTGSAFELV*
Ga0066709_1018675971	3300009137	Grasslands Soil	LGQPLIRVEIVADSQGLTVRLGIAPSILTQVYARDGLGLFDRSSANFAVELRDQRDGRRLERQPALVEFVPGAEDADEYAPKFRPGSAFELA*
Ga0066709_1020057862	3300009137	Grasslands Soil	MIRVEVVADTEGLKVRLAIAPSILTQVYARNGLGLFDRSTANVTVELRDQRDGRRLERQPVVVEFVPGSEDLDEYASKFRSGSSFELS*
Ga0066709_1021898532	3300009137	Grasslands Soil	LGQPLIRVEILADSEGLKVRLVIAPSILTQVYARDGLGLFDRSTSNVAVELRDQRDDRRLERQPVLVEFVPGSEDAEEYAPKFRPGSAFELA*
Ga0114129_110289802	3300009147	Populus Rhizosphere	MIRVEVVADADGMKVRLVIAPSILTQVYARDGLGLFDRSTTNASLELRDRRDGRAFERQPLVVEFVPGSEDAEDYAPKFRPGSSFELA*
Ga0114129_126062392	3300009147	Populus Rhizosphere	MGQPLIRVEIVADAEGMKVRLAIAPSILTQVYARDGLGLFDRSTANAAVELVDRRDGRRLERQPAVVEFVPGSEDSDDYASKFRPGSAFELE*
Ga0111538_127243702	3300009156	Populus Rhizosphere	IRVEVVADDDGMKVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0134071_101956502	3300010336	Grasslands Soil	MIRVEIVADDEGMKVRLAIAPSILTQVYARDGLGLFDRDSANVAVELHDRREGRRLERQPIALEFVPGSEDTDEYAPKFRPGSAFEL
Ga0134071_106975901	3300010336	Grasslands Soil	LGQPLIRVEILADSEGLKVRLGIAPSILTQVYARDGLGLFDRSTANVAVELRDQRDGRRLERQPVLVEFVPGSEDAEEYAPKFRPGSAFELA*
Ga0134127_128456011	3300010399	Terrestrial Soil	LGQPLIHVEIVADAEGLRVRLGIAPSILTQVYARDGLGLFDRSTANVTVELRDQRDGRSFERQPVQVEFVPASEDAEEYAPKFRPGSGFELS*
Ga0137391_114184771	3300011270	Vadose Zone Soil	MGQPLIRIEVVAETEGLKVRLAIAPSILTQVYARDGSGLFDRSTANIAVELEDRRDGRCLERQPVLLEFTPGAEDAEEYASKFRPGTAFELGPCP*
Ga0120152_10009466	3300012011	Permafrost	MGQPSIRVEVVADSEGLKVRLWIAPSILTQVYARDGLGMFDRATANIVVELEDRRDGRRLERQPVLLEFVPGSEDAEEFAPKFRPGSAFELA*
Ga0120139_11622992	3300012019	Permafrost	LMLLDEGLKVRVWIAPSILTQVYARDGLGMFDRATANIVVELEDRRDGRRLERQPVLLEFVPGSEDAEEYAPKFRPGSAFELA*
Ga0137364_105176252	3300012198	Vadose Zone Soil	MAQPLIRIEVVADSEGLKVRLGIAPSILTEVYARDGLGMFDRATANTVVELSDRRDGRRFERQPILVEFVPASEDAEDYAPKFRPGSAFDLE*
Ga0137365_113356941	3300012201	Vadose Zone Soil	MGQPLIRVEVVVDADGMKVRLALAPSVLTEVYARDGLGLFDRDRANLAVELRDRRDGRSLERRPIVVEFVPGSEDAEEYAPKFRPGSAFELTAPE*
Ga0137374_100012937	3300012204	Vadose Zone Soil	MGQPLIRVEIVADSDGMKVRLAIAPSILTEVYARDGLGLFDRDNANIAVELRDQRDGRSLERRPTLVEFVPGSEDAEDYAPKFRPGSPFELTGS*
Ga0137374_1000274927	3300012204	Vadose Zone Soil	MGQPLIRVEVVVDADGMKVRLAIAPSVLTEVYARDGLGLFDRDRANLAVELRDQRDGRSLERRPVLVEFAPGSEDAEEYAPKFRPGSAFELTGPE*
Ga0137374_100098812	3300012204	Vadose Zone Soil	MGQPLIRVEIVVDADGMRVRLAVAPSILTEVYARDGLGLFDRDNANIAVELRDQRDGRSLERRPNLVEFVPGSEDAEEYAPKFRPGSALELTDM*
Ga0137374_100748482	3300012204	Vadose Zone Soil	MIRVEVVADSEGLKVRLSIAPSILTQVYARDGLGLFDRDTANVAVELRDQRDGRRLERQPIVLEFVPGSEDLDEYAPKFRPGSVFELG*
Ga0137380_100002147	3300012206	Vadose Zone Soil	MVRVEVVADDEGMRVRLAIAPSILTQVYARDGLGLFDRNSANVAVELHDRRDGRRLERQPIVLEFVPGSEDLDEYAPKFRPGSAFELG*
Ga0137380_102152822	3300012206	Vadose Zone Soil	LIRVEVVGDSEGMKVRLGIAPSILTQVYARDGVGAFDRSTANLAVELRDHRDGRHLERQPILLEFYPGSEDADEYAPKFRPGSAFELE*
Ga0137381_115057902	3300012207	Vadose Zone Soil	MGQPMIRIEVVAESDGLKVRVALAPSILTEVYARDGLGLFDRATANCAVELLDRRDGRRFERQPIVVEFVPASEDADDFAPKF
Ga0137376_117003332	3300012208	Vadose Zone Soil	MGQPLIRVEVVAHADGLKVRLAIAPSILTQVYARDGLGLFDRDTANLAVELQDKRDGRSFERRPVLVEFVRGSEDAEEY
Ga0137379_108164462	3300012209	Vadose Zone Soil	MGQPLIRVEVVADDRGLKVRLVIAPSVLTEVYARDGLGVFDGDNANIAVALRDHRDGRSLERRPALVEFTPGSEDAEEYAPKFRPGSAFELAGPG*
Ga0137378_100015395	3300012210	Vadose Zone Soil	MIRVEVVADSGGLKVRLAIAPSILAQVYARDGLGLFDRSSANVAVELLDQRDGRRFERQPELLEFVPASEDAVEYASKFRPGSAFELA*
Ga0137378_100024842	3300012210	Vadose Zone Soil	MGQPLIRIEVVAETDGLKVRLAIAPSILTQVYARGGLGLFDRSTSNIAVELRDRRDGRTFERQPALLEFTPGAEDADEYASKFRPGSAFELGS*
Ga0137378_101414353	3300012210	Vadose Zone Soil	MIRVEIVADDEGMKVRLAIAPSILTQVYARDGLGLFDRNSANVAVELHDRRNGRRLERQPIALEFVPGSEDLDEYAPKFRSGSAFELT*
Ga0150985_1118637551	3300012212	Avena Fatua Rhizosphere	PLIRIEVVADDDGLKVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDLRTGRSLERRPVVVEFAPAAEDAEDYAPKFRPGSAFELTGDG*
Ga0137366_103615022	3300012354	Vadose Zone Soil	MLGRLSMDPFTARRDSMGQPLIRIAVVAESDGLHVGLVIAPSILTQVYARDGLGLFDRSTANIAVELADRRNGRCFERQPVLVEFGPGSEDAEEYASKFRPGTAFELGSC*
Ga0137384_105942532	3300012357	Vadose Zone Soil	MIRVEIVADYEGMKVRLAIAPSILTQVYARDGLGLFDRNSANVAVELHDRRNGRRLERQPIALEFVPGSEDLDEYAPKFRSGSAFELT*
Ga0137384_105944792	3300012357	Vadose Zone Soil	MGQPLIRVEVVADDRGLKVRLVIAPSVLTEVYARDGLGVFDGDNANIAVALRDHRDGRSLERRPAMVEFTPGSEDAEEYAPKFRPG
Ga0137368_102982083	3300012358	Vadose Zone Soil	LIRVEVVADHEGMKVRLQIAPSILTQVYARDGLGLFDRSNANVAVELQDRRDGRSLSRQPVLVEFVPGAEDAEGY
Ga0137385_115951021	3300012359	Vadose Zone Soil	MGQPLIRVEVVADDRGLKVRLVIAPSVLTEVYARDGLGVFDGDNANIAVALRDHRDGRSLERRPALVEFTPGSEDAEEYAPKFRPGSAFELGPC*
Ga0137373_101150232	3300012532	Vadose Zone Soil	LIRVEVVADHEGMKVRLQIAPSILTQVYARDGLGLFDRSNANVAVELQDRRDGRSLSRQPVLVEFVPGAEDAEGYAPKFRPGSAFELSP*
Ga0137373_101824143	3300012532	Vadose Zone Soil	MGQPLIRVEIVADSDGMKVRLAIAPSILTEVYARDGLGLFDRDNANIAVELRDQRDGRSLERRPTLVEFVPGSEDAEDYAPKFRPGSPFE
Ga0137373_103745522	3300012532	Vadose Zone Soil	MIRVEVVADSEGLKVRLSIAPSILTQVYARDGLGLFDRDTANVAVELRDQRDGRRLERQPIVLEFVPGSEDLDEYAPKFRPGSVFELR*
Ga0134077_101722992	3300012972	Grasslands Soil	MIRIEVVAASDGMKVRLAIAPSILAQVYARDGLGLFDRSSANVAVELRDQPDGRRFERQPELVEFVPAAEEAEEYASKFRPGSAFELE*
Ga0134077_105722072	3300012972	Grasslands Soil	IRVEVVADAEGLKVRLAIAPSILTQVYARDGLGLYDRSNANIAVELRDQRDGRSLERQPFLLEFAPASEDAEEYASKFRPGSAFELA*
Ga0164304_107378122	3300012986	Soil	MAEGKPLIRVEVVADDEGLKVRLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDQRTGRSLERRPVVVEFSPASEEAEEYAPKFRPGSPFELSDG*
Ga0120154_10690341	3300013501	Permafrost	MGQPLIRVEIVADNEGLKVRLVMAPSILNEVYAREGLGLFDRSTANAAVELRDTRDGRSFERQPALVEFVPGSEDAEEYASKFRPGSAFELSAAEPAEGSG*
Ga0120155_11908081	3300013768	Permafrost	SRKGEGMGQPLIRVEIVADNEGLKVRLAIAPSVLNQVYAREGLGLFDRGTANAAVELRDTRDGRSFERQPALVEFVPGSEDAKEYASKFRPGSAFELSAAEPAEGSG*
Ga0132258_103801984	3300015371	Arabidopsis Rhizosphere	MGQPLIKVEVVADDDGLRVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDLRTGKSLERRPVVVEFAPASEDAEEYAPKFRPGSAFELTD*
Ga0132258_107471734	3300015371	Arabidopsis Rhizosphere	MGQPLIRVEVVADDDGMKVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG*
Ga0132258_116319342	3300015371	Arabidopsis Rhizosphere	MGQPMIRIEVVANAEGMSVRLAIAPSILTEVYARDGLGLFDRATANASVELSDARDGRRFERQPLQVEFVPASEDAEEYAPKFRPGSAFELA*
Ga0187779_103435102	3300017959	Tropical Peatland	MGQPLIRLEIVAAADGLTVRLAVAPSILTQVYARDGLGMFNRETANIAVELRDQRDDRCFERQPAVFEFTPGSEDAEEYASKFRPGSAFELGPCP
Ga0187777_102414631	3300017974	Tropical Peatland	MGQPLIRLEIVAAADGLRVRLAIAPSILTQVYARDGLGMFNRETANIAVELRDQRDNRCFERQPAVFEFTPGSEDADDYASKFRPGSAFELAPCR
Ga0184610_11773761	3300017997	Groundwater Sediment	MGQPLIRIAVVAEADGLHVRLVIAPSILTQVYARDGLGLFDRSTANIAVELGDRRNGRCFERQPILVEFSPGSEDAEEYASKFRPGTAFELGSC
Ga0184623_100392522	3300018056	Groundwater Sediment	MVTLLLVHLSSDVFEVWQIMGPRMLSWLSMDPFTARRDSMGQPLIRIAVVAEADGLHVRLVIAPSILTQVYARDGLGLFDRSTANIAVELGDRRNGRCFERQPILVEFSPGSEDAEEYASKFRPGTAFELGSC
Ga0184619_100069124	3300018061	Groundwater Sediment	MGQPLIRVEIVADTDSLKVRLVIAPSILTEVYARDGLGLFDRGTANIGVQLRDQRDGRSFERRPAMIEFAPGSEDAEEYAPKFRPGSAFELSSSG
Ga0187773_108963171	3300018064	Tropical Peatland	MGQPLIRLEIVAATDGLRVRLAIAPSILTQVYARDGLGMFNRETANIAVELRDQRDDRCFERQPAVFEFTPGSEDADEYASKFRPGSAFELAPCR
Ga0184632_100015245	3300018075	Groundwater Sediment	VGQPLIRVEVVAESEGMKVRLAIAPSVLTQVYARDGLGLFDRGNANISVELRDQRDGRHLERQPVVLEFVPGSEDADEYAPKFRPGSAFELA
Ga0184609_100471112	3300018076	Groundwater Sediment	LGQPLIRVEIVAEPEGMKVRLAIAPSVLTQVYARDGLGLFDRGNANIAVELRDQRDGRRLERQPVVLEFIPGSEDADEYAPKFRPGSAFELA
Ga0066662_122860811	3300018468	Grasslands Soil	LGQPLIRVEIVGDSEGMKVRLGIAPSILTQVYARDGLGLFDRSNANIAVELRDRRDDRCFERQPALFEFSPAAEAAAEYAPKFRPGTAFELGPCSCPAVSARSPF
Ga0066669_101891921	3300018482	Grasslands Soil	LIRIEVMADSEGLKVRLGIAPSILTQVYARDGLGLFDRSTTNAAVELSDRRDGRRFERQPILVEFVPGSEDAEDYAPKFRPGSGFEL
Ga0066669_109700452	3300018482	Grasslands Soil	MGQPLIRLEIVAEAEGLKVRLAIAPSILTQVYARDGLGLFDRSNANIAVELRDRRDDRCFERQPAVFEFTPGSEDADEYASKFRPGSAFELGPCS
Ga0066669_109934622	3300018482	Grasslands Soil	TRQRLVERETMGQPLIRVEVVVDADGMKVRIAIAPSILTEVYARDGLGLFDRDKANLAVELRDQRDGRSLERRPVLVEFAPGSEDAEDYAPKFRPGSAFELA
Ga0193719_103102592	3300021344	Soil	DIEAGGLMGQPLVRLEVVADSEGLKLRLGIAPTILTQLYARDGLGSFDRSNANIAVELRDQRDGRGFERQPLVLEFYPASEDADEYASKFRPGSAFELA
Ga0207670_116358151	3300025936	Switchgrass Rhizosphere	MGQPLIRVEIVADDDGMKVQLAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDSRTGRSLERRPLLVEFSPAAEDAEEYAPKFRAGSAFELTDER
Ga0209283_104636372	3300027875	Vadose Zone Soil	MGQPLIRIEVVAETEGLKVRLAIAPSILTQVYARDGSGLFDRSTTNIAVELEDRRDGRCFERQPVLLEFTPGAEDAEEYASKFRPGTAFELGPCP
Ga0209590_100445542	3300027882	Vadose Zone Soil	MGQPLIRIEVVAETDGLKVRLAIAPSILTQVYARSGLGLFDRSTANIAVELRDRRDGRSFERQPALLEFTPGAEDADEYASKFRPGSAFELGS
Ga0209590_105625932	3300027882	Vadose Zone Soil	VGQPMIRVEIVADTEGMKVRLAIAPSILTQVYARDGLGLFDRSTANVTVELRDQRAGRRLERQPVALEFVPGSEDLDEYASKFRPGSAFELS
Ga0307305_104420161	3300028807	Soil	RVMPHGRREALGQPSIRIEVVADAEGLKVRLSVAPSILTQVYARDGLGLFERSTTNVAVELRDQRNGRGFERQPVLLEFVPGSEDAEEYAPMFRPGSAFELA
Ga0307296_106839512	3300028819	Soil	MGQPLIRIAVVAEADGLHVRLVIAPSILTQVYARDGLGLFDRNTANIAVELGDRRNDRCFERQPVSVEFSPGSEDAEEYASKFRPGSAFELGSC
Ga0307312_104544302	3300028828	Soil	MGQPLIRVEVVAEADGLHVRLAIAPSILTQVYARDGLGLFDRSTANIAVELHDRRDGRCFERQPVALEFTPGAEDAEDHASKFRPGSAFELGPCP
Ga0307312_108780672	3300028828	Soil	IAVVAEADGLHVRLVIAPSILTQVYARDGLGLFDRNTANIAVELEDRRNDRCFERQPVSVEFSPGSEDAEDYASKFRPGSAFELGSC
Ga0307278_100565861	3300028878	Soil	MGQPTIRVEVVADHEGLKVRIAIAPSILTQVYARDGLGIFDRTTANLAVELRDQRDRRLERQPVVVEFGPASEDLDDYASKFRPGSAFELT
Ga0307278_100650963	3300028878	Soil	MGQPLIRIAVVAEADGLHVRLVIAPSILTQVYARDGLGLFDRNTANIAVELEDRRNSRCFERQPVLVEFSPGAEDS
Ga0307278_103370571	3300028878	Soil	VGQPLIRVEIVAEPEGMKVRLAIAPSVLTQVYARDGLGLFDRGNANIAVELRDQRDGRRLERQPVVLEFVPGAEDTDEYAPKFRPGSPFELA
Ga0307277_100064003	3300028881	Soil	MGQPLIRVEVVAYTDGLKVRLAIAPSILTQVYARDGLGLFDRDTANLAVELQDKRDGRFLERRPILVEFVRGSEDAEEYAPKFRPGSAFELESSE
Ga0307277_101497633	3300028881	Soil	IRVEVVADDDGLKVQLAIAPSILTEVYARDGLGLFDRDRANLVVDLRDHRTGRSLERRPLVVEFAPAAEDAEEFAPKFRPGSAFELTDRG
Ga0307304_102590191	3300028885	Soil	MGQPLIRVEVVADDDGLKVQIAIAPSVLTEVYARDGLGLFDRDRANLVVDLRDRRTGRSFERRPVVVEFSPAAEDAEEYAPKFRPGSAFELGDP
Ga0247827_110050342	3300028889	Soil	MGQPLIRVEIVADDDGLKVQLAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG
Ga0311350_108355932	3300030002	Fen	MGQPLIRIEIVAEGEGMSVRLAIAPSVLTQVYARDGLGLFDRSSANIAVELRDNRTGRCFERQPARVEFTPGSEDAEEYASKVRAGSAFELGPCP
Ga0307471_1018931961	3300032180	Hardwood Forest Soil	RREALGQPLIRVEIVADSEGLKVRLGIAPSILTQVYARDGLGLFDRTTANVAVELRDQRDGRSLERQPVLVEFVPGSEDAEEYAPKFRPGSAFELA
Ga0247829_104723581	3300033550	Soil	MGQPLIRVEVVADDDGMRVQIAIAPSVLTEVYARDGLGLFDRDRANLVLDLRDQRTGKRLERRPVVVEFSPASEDVDEYAPKFRPGSAFELGDPGG
Ga0334931_168254_203_487	3300034377	Sub-Biocrust Soil	MGQPLIRVEVTADDQGMKVRLVIAPSILNEVYARDGLGLFDRDKANLAVELRDQRDGRSLERRPLVVEFSPGSEDADEYAPKFRPGSAFELTRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074633

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences