Metagenome Family F074625

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074625
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	106 residues
Representative Sequence	LFFQHLRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGSSPGGPHGEVRIEFDGRIYGAPFAIPAEEGNLGRSGRSQQEFWTRIPIQEMLKLTAASHRAG
Number of Associated Samples	108
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.88 %
% of genes near scaffold ends (potentially truncated)	95.80 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.958 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.689 % of family members)
Environment Ontology (ENVO)	Unclassified (37.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.017 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.42% β-sheet: 28.99% Coil/Unstructured: 61.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01894	UPF0047	4.20
PF00210	Ferritin	3.36
PF00497	SBP_bac_3	1.68
PF16363	GDP_Man_Dehyd	1.68
PF10518	TAT_signal	0.84
PF00326	Peptidase_S9	0.84
PF12867	DinB_2	0.84
PF01797	Y1_Tnp	0.84
PF08240	ADH_N	0.84
PF00932	LTD	0.84
PF01381	HTH_3	0.84
PF13744	HTH_37	0.84
PF00535	Glycos_transf_2	0.84
PF00507	Oxidored_q4	0.84
PF00179	UQ_con	0.84
PF07805	Obsolete Pfam Family	0.84
PF03062	MBOAT	0.84
PF07635	PSCyt1	0.84
PF13470	PIN_3	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	4.20
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	0.84
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.84
COG5078	Ubiquitin-protein ligase	Posttranslational modification, protein turnover, chaperones [O]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.96 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	84.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.88 %
Unclassified	root	N/A	5.04 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	84.03 %
Unclassified	root	N/A	5.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	81.51 %
Unclassified	root	N/A	5.04 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.51 %
Unclassified	root	N/A	5.04 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	3.36 %
Cohaesibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae	1.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.51 %
Unclassified	root	N/A	5.04 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	3.36 %
Cohaesibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae → Cohaesibacter	1.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.51 %
Unclassified	root	N/A	5.04 %
Nitrosomonas europaea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas europaea	1.68 %
Cohaesibacter marisflavi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae → Cohaesibacter → Cohaesibacter marisflavi	1.68 %
unclassified Nitrosomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas	1.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.51 %
Unclassified	root	N/A	5.04 %
Nitrosomonas sp. AL212	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. AL212	1.68 %
Nitrosomonas europaea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas europaea	1.68 %
Cohaesibacter marisflavi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae → Cohaesibacter → Cohaesibacter marisflavi	1.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_102003724	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300000559\|F14TC_103044488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300000955\|JGI1027J12803_103013324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300001213\|JGIcombinedJ13530_101559032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300004092\|Ga0062389_102952522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300004463\|Ga0063356_104138795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. AL212	624	Open in IMG/M
3300004479\|Ga0062595_101284325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300005172\|Ga0066683_10636061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300005187\|Ga0066675_11243710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas europaea	551	Open in IMG/M
3300005332\|Ga0066388_106419048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300005335\|Ga0070666_11402088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005340\|Ga0070689_101627120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300005365\|Ga0070688_100724287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300005365\|Ga0070688_101116879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300005367\|Ga0070667_101514996	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005439\|Ga0070711_102018732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300005440\|Ga0070705_101688217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300005444\|Ga0070694_101400717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300005553\|Ga0066695_10581561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300005553\|Ga0066695_10757667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300005559\|Ga0066700_11041384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005564\|Ga0070664_102291685	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005569\|Ga0066705_10669284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005574\|Ga0066694_10422777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300005718\|Ga0068866_11342329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. AL212	521	Open in IMG/M
3300005841\|Ga0068863_100131106	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300006034\|Ga0066656_10910722	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006046\|Ga0066652_100927125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae → Cohaesibacter → Cohaesibacter marisflavi	830	Open in IMG/M
3300006796\|Ga0066665_10973146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300006796\|Ga0066665_11083058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300006800\|Ga0066660_11675669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300006914\|Ga0075436_100689387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300009011\|Ga0105251_10428695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300009012\|Ga0066710_103476247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300009012\|Ga0066710_103522357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300009093\|Ga0105240_11620144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300009137\|Ga0066709_101601001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	932	Open in IMG/M
3300009167\|Ga0113563_13761203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300009520\|Ga0116214_1334649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300009522\|Ga0116218_1304739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300009792\|Ga0126374_11298137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300010333\|Ga0134080_10608317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300010397\|Ga0134124_10459443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1224	Open in IMG/M
3300010403\|Ga0134123_10773612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	949	Open in IMG/M
3300012096\|Ga0137389_11435167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012200\|Ga0137382_10395902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300012205\|Ga0137362_10475942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1081	Open in IMG/M
3300012208\|Ga0137376_11471517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012349\|Ga0137387_10974345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300012351\|Ga0137386_10341407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1078	Open in IMG/M
3300012354\|Ga0137366_11084152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300012356\|Ga0137371_10552449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300012356\|Ga0137371_10929481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300012357\|Ga0137384_10937705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300012362\|Ga0137361_11445688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300012469\|Ga0150984_100822363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1212	Open in IMG/M
3300012582\|Ga0137358_10471042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	847	Open in IMG/M
3300012683\|Ga0137398_11046943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012685\|Ga0137397_10304797	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012685\|Ga0137397_10531645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300012922\|Ga0137394_10144183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2024	Open in IMG/M
3300012925\|Ga0137419_11897637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012929\|Ga0137404_10487206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1099	Open in IMG/M
3300012929\|Ga0137404_11452592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300012929\|Ga0137404_12037136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300012930\|Ga0137407_10296751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1477	Open in IMG/M
3300012944\|Ga0137410_11312381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012944\|Ga0137410_11369109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300013296\|Ga0157374_10646952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1069	Open in IMG/M
3300014154\|Ga0134075_10295385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300014489\|Ga0182018_10507725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300014655\|Ga0181516_10122435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1315	Open in IMG/M
3300014969\|Ga0157376_12704821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300015053\|Ga0137405_1332245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1412	Open in IMG/M
3300015245\|Ga0137409_10870143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300016294\|Ga0182041_10234397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1484	Open in IMG/M
3300016341\|Ga0182035_12198639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300016371\|Ga0182034_11820228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300016387\|Ga0182040_11885428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300018027\|Ga0184605_10199692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300018042\|Ga0187871_10737934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300018071\|Ga0184618_10286821	Not Available	699	Open in IMG/M
3300018431\|Ga0066655_11374769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300018482\|Ga0066669_12302331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300019888\|Ga0193751_1274727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300019996\|Ga0193693_1012826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1655	Open in IMG/M
3300020020\|Ga0193738_1134413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300021560\|Ga0126371_13228825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas europaea	551	Open in IMG/M
3300024290\|Ga0247667_1100727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300024331\|Ga0247668_1096319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300025916\|Ga0207663_11705138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300025922\|Ga0207646_11557807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300026298\|Ga0209236_1283071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300026327\|Ga0209266_1284124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300026524\|Ga0209690_1310161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300028281\|Ga0247689_1039904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300028536\|Ga0137415_11035702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300028558\|Ga0265326_10174579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300028800\|Ga0265338_10560789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300029910\|Ga0311369_10405763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1182	Open in IMG/M
3300031231\|Ga0170824_104473850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300031234\|Ga0302325_10656099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1526	Open in IMG/M
3300031234\|Ga0302325_11291452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300031236\|Ga0302324_102799014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300031446\|Ga0170820_12478055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300031879\|Ga0306919_10703311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300031912\|Ga0306921_12778120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300031941\|Ga0310912_10595781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300031954\|Ga0306926_10285932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2042	Open in IMG/M
3300032001\|Ga0306922_10769537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1009	Open in IMG/M
3300032805\|Ga0335078_10538691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1489	Open in IMG/M
3300032893\|Ga0335069_11524099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300032897\|Ga0335071_11948937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Cohaesibacteraceae → Cohaesibacter → Cohaesibacter marisflavi	531	Open in IMG/M
3300033289\|Ga0310914_10073754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2879	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.24%
Freshwater	Environmental → Aquatic → Freshwater	3.36%
Peat	Environmental → Terrestrial → Peat	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Sediment	Environmental → Aquatic → Sediment	1.68%
Marine	Environmental → Aquatic → Marine	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.23%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.84%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.84%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1020037241	3300000364	Soil	RHVRSPEGFYNKDHRSSPGKEYEFIEFDTPIDLREVEAFVNFYKGEAPGGPSGEVRIEFGGRVYGGPFSIPAEEGNLGRRGRSEQRFWTRIPIRELLGLAPAG*
F14TC_1030444881	3300000559	Soil	HAGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVRAVEAFVNFYKGNCPXGARGEVRIEFDGRVYGAPFSIPVEQGNLGRAGRSQREFWTPIPIQKLLKLIQVANRDG*
JGI1027J12803_1030133241	3300000955	Soil	TLYFEHVRSPEGYYYKDHRSSPGREYEFVEFESVDAREVEAFINFYKGHCPGGPRGEVRIEFDGRIYVAPFAISAEEGNLGRSGESQQEFWTRIPIQEILRLSQPTASRRDRD*
JGIcombinedJ13530_1015590322	3300001213	Wetland	TLFFKHPRSPEGYYYKDHRSSPGREYEFIEFEAPVDIREFEAFVNFYKGACEGGPRGEVRIEFDSQVYGAAFSIAASHGNRGRAGEDQQAYWVRLPVQEILRLAPRLSASGARN*
Ga0062389_1029525221	3300004092	Bog Forest Soil	QHPRSPEGYYFKDHRSSPGREYEFIEFESPVDVRKAQAFVNFYDGSCPGGPRGEVRIEFLNRIYSGTFAITSREGNQGRSGPSQTDFWTQIPIQEILGINGAAPRAANTAN*
Ga0063356_1041387951	3300004463	Arabidopsis Thaliana Rhizosphere	PEGYYYKDHRSSPGRDYEFIEFESSVDIHEAQAFINFYKGEWPGGAHGEVRIEFDGRIYGGPFTIPAERGNLGRAGRTQDEFWTPIPIQKLLKIVQTANRDR*
Ga0062595_1012843251	3300004479	Soil	HRRSPGREYEFIEFESPVDAREVEAFINFYKGSCPGGPRGEVRIEFDGRIYGAPFSISAEEGNLGRAGQLQQEFWTRIPVQEILKLSQQTAAAGSHADRIR*
Ga0066683_106360611	3300005172	Soil	PGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFYIPAEQGNLGRSGPSQQEFWTPIPIQKMLKIVQTPIASGRAD*
Ga0066675_112437101	3300005187	Soil	GAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGRCPGGPGGEVRIEFDGRIYGAPFSISAEEGNLGRSGESQQEFWTRIPVQEILKLSAQRTASGG*
Ga0066388_1064190481	3300005332	Tropical Forest Soil	YFEHVRSPEGYYYKDHRRSPGREYEFIEFESPVDAREVEAFINFFKGRCPGGPGGEIRIEFDGRIYGAPFSISAEEGNLGRSGQSQQEFWTRIPVQEILKLSQPTARGG*
Ga0070666_114020881	3300005335	Switchgrass Rhizosphere	HVRSPEGYYYKDHRSSPGKEYEFVEYEMAVDAREVEAFVNFYKGDCEGGPHGEVRIEFDGRIYAGKFFIPASEGNRGRTGGAQQEFWARIPVQELLKISSTANRGG*
Ga0070689_1016271202	3300005340	Switchgrass Rhizosphere	YFQHVRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGACPGGARGEVRIEFDGRIYSHPFFIPADQGNLGRSGRSQEQFWTPIPIQKALKIVQTPMAAGRTD*
Ga0070688_1007242871	3300005365	Switchgrass Rhizosphere	QHTQAPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGNCDEGPKGEVRIEFDDKIYSGRFSITATEGNKGRSGRSQRDYWFHIPVQEILKLPTTLSSAR*
Ga0070688_1011168792	3300005365	Switchgrass Rhizosphere	EYEFIEFESPVDVREVEAFVNFYKGACPGGARGEVRIEFDGRIYSHPFFIPADQGNLGRSGRSQEQFWTPIPIQKALKIVQTPMAAGRTD*
Ga0070667_1015149962	3300005367	Switchgrass Rhizosphere	ENIDLDLYSAARPGAETLFFQHTQAPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGNCDEGPKGEVRIEFDDKIYSGRFSITATEGNKGRSGRSQRDYWFHIPVQEILKLPTTLSSAR*
Ga0070711_1020187321	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IPRPGAETLFFQHPRSPEGYYNKDHRSSPGREYEFIEYDTPVDIREVEAYVNFYKGSCPGGPQGEVRIEFDGKIYGAPFSLRASEGNLGEPGRSQSAYWTRIPVQEMLRLSPPSSRGG*
Ga0070705_1016882172	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFILAEQGNLGRSGPSQEEFWTPIPIRKALNIVQQPIATRRTD*
Ga0070694_1014007172	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SSPGREYEFIEFESPVDVRTVEAFINFYKGDCPGGARGEVRIEFAGRIYGAPFSIPAEQGNLGRAGRSQDEFWTPIPIQKLLKIVQSANRDR*
Ga0066695_105815611	3300005553	Soil	EGYYYKDHRSSPGREYEFIEFESPVDVRKVEAFVNFYKGDCPGGARGEVRIEFDGRIYGAPFSLEAEQGNLGRAGRSQHEFWTPIPIPKLLKIVQAANRDR*
Ga0066695_107576672	3300005553	Soil	PRPGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDIREVEAFINFYKGSCPGGARGEVRIEFDGRIYSIPFFISAEQGNLGRSGPSQQEFWTPIPIRKVLNIVQQPIATRRTK
Ga0066698_106182832	3300005558	Soil	EFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGFPFYIPAEQGNLGRSGPSQQEFWTPIPIQKMLKIVQTPIASGRAD*
Ga0066700_110413841	3300005559	Soil	SGAETLFFQHTRSPEGYYYKDHRSSPGREYEFIEFESPVDIHEVEAMVNFYKGHLPSGAHGEVRIEFDGRIYGAPFFVEATEGNRGRSGPGQEEFWTQIPIREILKLKVERAAK*
Ga0070664_1022916852	3300005564	Corn Rhizosphere	YYYKDHRSSPGKEYEFIVFEAPVDVRELEVFVNFYKGYCPGGPRGEVRIEFDGRIYSAPFSIPAERGNLGRSGAAAQEFWTRIPVQEVLKIAAAG*
Ga0066705_106692842	3300005569	Soil	PEGYYYKDHRSSPGREYEFIEFESSVDVREVEAYINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPADQGNLGRSGASQQEYWTPIPIQKALRIVQTPIATRRAD*
Ga0066694_104227771	3300005574	Soil	RSPEGYYYKDHRSSPGREYEFIEFDSSVDVREVEALINFYKGSCPGGARGEVRIEFDGRIYGLPFFLPAEQGNLGRSGLSQHEFWTPIPIQKALKIVQPPIASGRID*
Ga0068866_113423291	3300005718	Miscanthus Rhizosphere	PGREYEFIEFESPVDIREVEAFVNFYKGDWPGGAHGEVRIEFDGRIYGAPFSIPAERGNLGRAGRTQDEFWTPIPIQKLLKIVQTANRDR*
Ga0068863_1001311064	3300005841	Switchgrass Rhizosphere	EYEFIEFESPVDVREVEAFVNFYKGACPGGARGEVRIEFDGRIYSHSFFIPADQGNLGRSGRLQEEFWTPIPIQKALKMVPTPIAAGRTD*
Ga0066656_109107222	3300006034	Soil	DHRSSPGREYEFIEFESPVDVREVEAMVNFYKGHCPGGARGEVRIEFDGRIYCAPFSIEATEGNRGRSGPGQGEFWTQIPIQEILKLKVERAAK*
Ga0066652_1009271251	3300006046	Soil	YFEHVRSPEGYYYKDHRSSPGREYEFIEFESAVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGIPFFIAAEQGNLGRSGPSQQEFWTPIPIQRALKIVQTPIATRRTD*
Ga0066665_109731462	3300006796	Soil	SPEGYYYKDHRSSPGREYEFIEFESSVDVREIEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPAEQGNLGRSGRSQQEFWTPIPIQKALNILQRPIATLRTD*
Ga0066665_110003771	3300006796	Soil	FIEFESPVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGSPFFLPAEQGNLGRSGPSQHEFWAPIPIQRVLNLVQQPIATRRTD*
Ga0066665_110830582	3300006796	Soil	RSSPGREYEFIEFESPVDIREVEASVNFYKGDCPGGPRGEVRIEFDGRIYGATFSIPSSEGNQGRSGRSQQDFWTRIPVKEILKITAAAERAG*
Ga0066660_116756692	3300006800	Soil	FQHVRSPEGYYYKDHRSSPGKEYEFIEFERPVDAREVQAFVNFYKGNSPEGPRGEVRIEFDGRIYSGNFAITADHGNLGRTAGSQGEYWTKIPVQELLKLTSPERAESTTAR*
Ga0075436_1006893872	3300006914	Populus Rhizosphere	DLYAAPRHGAETLFFQHTRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGSRPGGPGGEVRIEFDGRIYSGHFSIEATEGNRGRTGRNQEACWTRIPVREILGIPASSERADNAARN*
Ga0105251_104286951	3300009011	Switchgrass Rhizosphere	TLFFQHVRSPMGYYYKDHRSSPGKEYEFIVFEAPVDVREVEVFVNFYKGYCPGGPRGEVRIEFDGRIYSAPFSIPAEQGNLGRSGVSAQEFWTRIPVQEVLKIAAAG*
Ga0066710_1034762471	3300009012	Grasslands Soil	TPRPGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVNVREVEAFINFYKGSCPGGAHGEVRIEFDGRIYGRPFFIAADQGNLGRSGPAQKEFWTPIPIQKVLNMVQQPMVTGKT
Ga0066710_1035223571	3300009012	Grasslands Soil	RPGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPAEQGNLGRSGPSQQEFWTPIPIQKALEIVRQPIASGIP
Ga0105240_116201442	3300009093	Corn Rhizosphere	LDLYSAARPGAETLFFQHTQAPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGNCDEGPKGEVRIEFDDKIYSGRFSITATEGNKGRSGRSQRDYWFHIPVQEILKLPTTLSSAR*
Ga0066709_1016010012	3300009137	Grasslands Soil	YEFIEFESSVDVREVEAYINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPADQGNLGRSGASQQEYWTPIPIQKALRIVQTPIATRRAD*
Ga0113563_137612032	3300009167	Freshwater Wetlands	GREYEFIEFESPVDIRGVEAFINFYKGSCPEGPNGEVRIEFDGRIYGAPFSIAAGEGNRGRSSPDQHDFWTKIPVQQILKITPTESAAR*
Ga0116214_13346492	3300009520	Peatlands Soil	FFQHMRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVKAFVNFYRGSCPGGPRGEVRIEFLNRIYRGAFEIDSSEGNEGRSGRSQARFWTAIPIQEILRINETAPQAAR*
Ga0116218_13047392	3300009522	Peatlands Soil	WKENIDLDMYPNPHPGAETLFFQHMRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVKAFVNFYRGSCPGGPRGEVRIEFLNRIYRGAFEIDSSEGNEGRSGRSQARFWTAIPIQEILRINETAPQAAR*
Ga0126374_112981371	3300009792	Tropical Forest Soil	GAETLFFQHLRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVSAFVNFYKGACPGGPRGEVRIEYENKIYAARFAIASSHGNRGRAGSAQEDCWTRIPVQEILKLSGPTAKN*
Ga0134080_106083171	3300010333	Grasslands Soil	DHRSSPGREYEFIEFESSVNVREVEAFINFYKGSCPGGAHGEVRIEFDGRIYGRPFFIAADQGNLGRSGASQQEFWTPIPIRKALKIVQQPIASGRTD*
Ga0134128_128680221	3300010373	Terrestrial Soil	EFIEFESPVDVREVEAFVNFYKGDCSGGPQGEVRIEFDGRIYGARFAIAAEEGNMGRTGRRQAEYWTKVPVLEILKLSGTQRSARQTIER*
Ga0134124_104594432	3300010397	Terrestrial Soil	GYYYKDHRSSPGREYEFIEFEAPVDVRTVEAFVNFYKGECPGGAHGEVRIEFDGRVYGAPFSMPAEQGNLGRSGRSQQEFWTPIPIQKMLKLVQSASRDR*
Ga0134123_107736121	3300010403	Terrestrial Soil	REYEFIEFESPVDVRAVEAFVNFYKDNCPGGARGEVRIEFAGRIYGAPFSIPAEQGNLGRTGGSQREFWTPIPIQKLLKIIHVANRDGENR*
Ga0137389_114351671	3300012096	Vadose Zone Soil	YYYKDHRSSPGKEYELIEFDSPVDLRQVEAFVNFYKGRCPGGPRGEVRIEFDGRIYTGAFSLRAEEGNLGQTGRSQQEFWTRIPVQELLKLPPPAARAG*
Ga0137382_103959021	3300012200	Vadose Zone Soil	ETLFFQHLRSPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGDCPGGPRGEVRIEFDGRIYGATFSIPSSEGNQGRSGRSQQDFWTRIPVKEILKITAAAERAG*
Ga0137362_104759421	3300012205	Vadose Zone Soil	HLRSPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGDCPGGPRGEVRIEFDGRIYGATFSIPSSEGNQGRSGRSQQDFWTRIPVKEILKITAAAERAG*
Ga0137376_114715171	3300012208	Vadose Zone Soil	DHRSSPGREYEFIEFESPVDAREVEAFINFFKGRCPGGPHGEVRIEFDGRIYGAPFAISAEEGNLGRSGQSQQEFWTRIPVQEILKLSQPTARGG*
Ga0137387_109743452	3300012349	Vadose Zone Soil	EFIAFESSVDIREVEAFINFYKGSCPGGARGEVRIEFDGRIYGIPFFISAEQGNLGRSGPSQQEFWTPIPIRKVLGIVQQPIAAGRTD*
Ga0137386_103414073	3300012351	Vadose Zone Soil	ETLFFQHTRSQEGYYYKDHRSSPGREYEFIEFESPVDIREVEAMVNFYKGHLPSGAHGEVRIEFDGRIYGAPFYIEAAEGNRGRSGSGQDEFWTQIPIQEILKLKVERAAK*
Ga0137366_110841522	3300012354	Vadose Zone Soil	PGAETLYFEHVRSPEGYYYKDHRTSPGREYEFIEFESPVDVREVEAFVNFYKGSCPGGAHGEVRIEFDGRIYGLSFFIPADQGNLGRSGPAQQEFWTPIPIQRVLNLVQRPIATGKAD*
Ga0137371_105524492	3300012356	Vadose Zone Soil	GYYYKDHRSSPGREYEFIEFESSVDVREVEAYINFYKGSCPGGARGEVRIEFDRRIYRLPFFIPAEQGNLGRSGPSQQEFWTPIPIQKALNIVQRPIATLRTD*
Ga0137371_109294812	3300012356	Vadose Zone Soil	EGYYYKDHRSSPGREYEFIEFESPVDVREVEAMVNFYKGHCPGGARGEVRIEFDGRIYCAPFSIEATEGNRGRSGPGQGEFWTQIPIQEILKLKVERAAK*
Ga0137384_109377051	3300012357	Vadose Zone Soil	GAETLFFQHLRSPEGYYYKDHRSSPGKEYEFIEFESPVDIRQVEAFLNFYKGYCPNGPQGEVRIEFDGRIYGAPFSIPSEEGNQGRTGRSQQDFWTKIPVQQILKIDVAADVSRR*
Ga0137361_114456881	3300012362	Vadose Zone Soil	SPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGSCPEGARGEVRVEFDGRIYGLPFFIPAEQGNLGRSGPSQQEFWTSIPIQRVLNLVQQPIATRRTD*
Ga0150984_1008223632	3300012469	Avena Fatua Rhizosphere	GKEYEFIEFESPVDCREVEAFVNFYKGHCPEGPRGEVRIEFGGRIYGGPFSLPAEEGNLGRSGRSQQEFWTRIPIQELLRIVPSSNRAG*
Ga0137373_102310991	3300012532	Vadose Zone Soil	EFESPVDVRKVEAFVNFYKGDWPGGARGEVRVEFDGRVYSAPFSMPAEQGNLGCSGLSQQEFWTLIPIQKLLKLVQAANRDR*
Ga0137358_104710422	3300012582	Vadose Zone Soil	AAAHSGAETLFFQHTRSPEGYYYKDHRSSPGREYEFIEFESPVDIREVEAMVNFYKGHCPGGARGEVRIEFDGRIYGAPFFIEASEGNRGRSGAGQEEFWTQIPIQEILKLKVERAAR*
Ga0137398_110469432	3300012683	Vadose Zone Soil	GREYEFIEFESPVDIRQVEAMVNFYKGHCPCGARGEVRIEFDGRIYGAPFLIEASEGNRGRSGPGQEEFWTQIPIREILKLKMERAAVR*
Ga0137397_103047973	3300012685	Vadose Zone Soil	EGYYYKDHRSSPGREYECSEVESPVDIRQVEAMVNFYKGHCPGGARGEVRIEFDGRIYGAPFFIEATGGNRGRSGPGQEEFWTPIPIQEILKLKVATAAVR*
Ga0137397_105316451	3300012685	Vadose Zone Soil	IDIDLYATPRSGAETLFFQHPRSPEGYYYKDHRASPGKEYEFIEFESPVDVREVEAFINFYKGDCAGGPRGEVRIEFDGRIYGAPFVIRAEQGNLGRTGRSQEEFWTRIPILEMLKIAQSGNRAG*
Ga0137394_101441834	3300012922	Vadose Zone Soil	FEHVRSPEGYYYKDHRSSPGREYEFIEFESPVDAREVEAFINFFKGRCPGGPHGEVRIEFDGRIYGAPFSISAEEGNLGRSGQSQQEFWTRIPVQEILKLSQPTARGG*
Ga0137419_118976371	3300012925	Vadose Zone Soil	LFFQHLRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGSSPGGPHGEVRIEFDGRIYGAPFAIPAEEGNLGRSGRSQQEFWTRIPIQEMLKLTAASHRAG*
Ga0137404_104872062	3300012929	Vadose Zone Soil	LYFEHVRSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPAEQGNLGRSGRSQQEFWTPIPIQKALNIVQQPIATRRTD*
Ga0137404_114525922	3300012929	Vadose Zone Soil	YYYKDHRSSPGKEYEFIEFESPVDVREVEAFINFYKGECPGGPRGEVRIEFDGRIYGAPFVIRAEEGNLGRTGRLQQEFWTRIPIQEMLKIVQSNNRAG*
Ga0137404_120371361	3300012929	Vadose Zone Soil	REYEFMEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGIPFFIPAEQGNLGRSGPSQQEYWTPIPIQKVLNIVQQPIATRRTD*
Ga0137407_102967511	3300012930	Vadose Zone Soil	YYYKDHRSSPGREYEFIEFESPVDIREVEAMINFYKGHCPGGARGEVRIEFDGRIYGGPFFLEAAEGNRGRSGPGQEEFWTQIPIREILKLKMERAAVR*
Ga0137410_113123812	3300012944	Vadose Zone Soil	HRDAETLFFQHLRSPEGYYYKDHRSSPGREYEFIEFESPVDIREVEASVNFYKGDCPGGPRGEVRIEFDGRIYGATFSIPSSEGNQGRSGRSQQDFWTRIPVKEILKITAVAERAG*
Ga0137410_113691091	3300012944	Vadose Zone Soil	RSPEGYYYKDHRSSPGKEYEFIEFESPVDIREVEAFVNFYKGRCPGGPHGEVRIEFDGRIYGAPFEIPAEEGNLGRTDRSQREFWTRIPIQEVLKIGSPASRDRAETRAGN*
Ga0157374_106469521	3300013296	Miscanthus Rhizosphere	YYKDHRSSPGKEYEFIEFERPVDAREVEAFINFYKGDCPGGPRGEVRIEFDGKIYSAPFSIRAGAGNLGRTGPLQDEYWTRIPIQEMLKLGQGGDRAG*
Ga0134075_102953851	3300014154	Grasslands Soil	TLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGGIYGLPFFIPAEQGNLGRSGPSQQEFWTPIPIQQVLGIVPQPIATRRTK*
Ga0182018_105077252	3300014489	Palsa	SPEGYYFKDHRSSPGREYEFVEFESPVDVRNVQGFVNFYSGSCPGGPRGQVRIEFLNRIYSGTFAIASAEGNQGRSGPAQAGFWTQIPVQEILRINEAAQQAASVAK*
Ga0181516_101224352	3300014655	Bog	LYATPRRGGETLFFQHPRSAEGYYYMDHRSSPGRDYEFIEFESPVDVREVEAYVNFYDGSSPGGVSGEARVEFNGRIYGAPFSLRASEGNRGRSGRSQQDFWARIPILEMLKVQ*
Ga0157376_127048211	3300014969	Miscanthus Rhizosphere	DHRSSPGREYEFIEFESPVDIREVEASVNFYKGNCDEGPKGEVRIEFDDKIYSGRFSITATEGNKGRSGRSQRDYWFHIPVQEILKLPTTLSSAR*
Ga0137405_13322453	3300015053	Vadose Zone Soil	AETLFFQHTRSPEGYYYKDHRASPGKEYEFIEFESPVDAREVEAFINFYKGDCPGGPRGEVRIEFDGRIYGAPFLIRAEEGNRGRTGRSQQEFWTRVPIQEILKIGGAGNRAG*
Ga0137409_108701431	3300015245	Vadose Zone Soil	ETLFFQHTRSPEGYYYKDHRSSPGREYEFIEFESPVDAHEVEAFINFYKGRCLGGPRGEVRIEFDGRIYGAPFSISAEEGNLGRAGQSQQEFWTRIPVQEILKLSQPTARGG*
Ga0182041_102343971	3300016294	Soil	HLRSPEGYYYKDHRSSPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKIYAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN
Ga0182035_121986391	3300016341	Soil	SPGREYEFIEFEASVDAREVEAFVNFYKGYCPGGPHGEVRIEFDGRIYVAPFAISSEEGNLGRSSESQQEYWTRIPVQEILKLSQRTASRTPQN
Ga0182034_118202282	3300016371	Soil	SPEGYYYKDHRSSPGREYEFIEFESPVDARKVEAFVNFYQGSSPGGARGEVRIEFDSRLYSAPFYIRAAKGNQGRAGREQHDFWTRIPLQEILRIPPSG
Ga0182040_118854281	3300016387	Soil	ATPREGAETLFFEHLRSPEGYYYKDHRSSPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKISAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN
Ga0184605_101996921	3300018027	Groundwater Sediment	LYATPRPGAETLYFEHVRSPEGYYYKDHRASPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPAEQGNLGRSGPSQQEFWTPIPIQKVLNIVQQPIAAGRTD
Ga0187871_107379341	3300018042	Peatland	DLYATPHRGAETLFFDHRRSPEGYYFKDHRSSPGREYEYIEFESPVDVRDLKGFVNFYDGSCPGGPRGEVRIEFLNRIYRSDFAIEKSEGNQGRTGRSQTRYWTEIPIQEILRINDVSPQSASAAR
Ga0184618_102868211	3300018071	Groundwater Sediment	EFIEFESSVDVREVEAFVNFYKGSCPRGARGEVRIEFDGKIYGLPFFIPAEQGNLGLSGRSQQEFWTPIPIQKALKMVQQPIASGRTD
Ga0066655_113747691	3300018431	Grasslands Soil	PGREYEFIEFESPVDVREVEAFINFYKGSCPGGARGEIRIEFDGRIYGLPFFISAEQGNLGRSGPSQHEFWTPIPIRKALKIVQQPIASGRTD
Ga0190274_121710261	3300018476	Soil	IEFESPVDIHEVQAFINFYKGEWPGGAHGEVRIEFDGRIYGGPFSIPAERGNLGRAGRTQDEYWTPIPIQKLLKLVQTANRER
Ga0066669_123023311	3300018482	Grasslands Soil	YATARPGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESAVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPADQGNLGRSGRSQQEFWTPIPIQKALKIAEQPMATRSAD
Ga0193751_12747271	3300019888	Soil	YATPHPGAETLYFEHVRSPEGYYYKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPADQGNLGRSGPSQQEFWTPIPIQKALNIVQQPIATRRTD
Ga0193693_10128263	3300019996	Soil	VRSPEGYYFKDHRSSPGREYEFVVFQSPVDAREVEAGINFYKGRCPGGPRGEVRIEFDGRIYAAPFAISGEEGNLGRSGESQQEFWTRIPVQEILKLSQRTASRDPQN
Ga0193738_11344131	3300020020	Soil	TPRPGAETLFFEHVRSPEGYYYKDHRSSPGQEYEFIEFESSVDIHEVQAFVNFYKGEWSGGAHGEVRIEFDGRIYGGPFAIPTERGNLGRAGRTQDEFWTPIPIQKLLKLVQTANRER
Ga0126371_132288251	3300021560	Tropical Forest Soil	ETLYFMHPRSPEGYYYKDHRSSPGKEYEFIEFETPVDIRHVEAFVNFYKGSCEGGPHGEVRIEFDGKIYGAPFSISASKGNRGRAGEDQRDYWVQIPVREIMKLAPSLSASGASK
Ga0247667_11007273	3300024290	Soil	YYYKDHRSSPGREYEFIEFETPVDVREVEAFVNFYKGSTPEGPGGEVRIEFDGRIYSGKFLIEASEGNRGRTGGKQEQFWTRIPVQQILRISAASEHAGLEP
Ga0247668_10963191	3300024331	Soil	YYKDHRSSPGKEYEFIVFEAPVDVRELEVFVNFYKGYCPGGPRGEVRIEFDGRIYSAPFSIPAERGNLGRSGASAQDFWTRIPVQEVLKIAAAG
Ga0207663_117051381	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IPRPGAETLFFQHPRSPEGYYNKDHRSSPGREYEFIEYDTPVDIREVEAYVNFYKGSCPGGPQGEVRIEFDGKIYGAPFSLRASEGNLGEPGRSQSAYWTRIPVQEMLRLSPPSSRGG
Ga0207646_115578071	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LYFEHVRSPEGYYNKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYNLPFFIPAEQGNLGRSGPSQQEFWTPIPI
Ga0209236_12830711	3300026298	Grasslands Soil	YEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFFIPAEQGNLGRSGPSQQEFWTPIPIRKVLRIVQQPIAAGRTD
Ga0209266_12841242	3300026327	Soil	REYEFIEFESSVDVREVEAFINFYKGSCPGGARGEVRIEFDGRIYGLPFYIPAEQGNLGRSGPSQQEFWTPIPIQKMLKIVQTPIASGRAD
Ga0209690_13101611	3300026524	Soil	YKDHRSSPGREYEFIEFESSVDVREVEAFINFYKGSCPGGARGEIRIEFDGRIYGQPFFIPAEQGNLGRSGPSQQEFWTPIPIQKALGIVQQPSASRRAD
Ga0247689_10399041	3300028281	Soil	RSSPGKEYEFIVFEAPVDVRELEVFVNFYKGYCPGGPRGEVRIEFDGRIYSAPFSIPAERGNLGRSGASAQDFWTRIPVQEVLKIAAAG
Ga0137415_110357022	3300028536	Vadose Zone Soil	HSPEGYYYKDHRSSPGREYEFIEFESPVDVREVEAFVNFYKGFRPGGPRGEVRIEFDGRIYGAPFSISAPEGNLGRSGRAQQDFWTRIPVQEILKLIPPA
Ga0265326_101745792	3300028558	Rhizosphere	ETLFFQHARSPEGYYFKDHRSSPGHEYEFIEFEKPVDVWEVEAMVDFYDGSAPGGPRGEVRIEFDNKIYTAPFAIQSDHGNQARSGSSQREFWTRIDVPRILHLTPRATAAR
Ga0265338_105607891	3300028800	Rhizosphere	YATPRKDAETLFFEHTKSPEGYYFKDHRSSPGREYEYIEFESPVDVREVKSFVNFFDGSCPGGPHGDVRIEFLNHIYSGSFAIESSDGNQGRAGKKQKRCWAEIPIKEILRIGDESARASNTVR
Ga0311369_104057633	3300029910	Palsa	RRDGETLFFQHTRSPEGYYFKDHRSSPGREYEFIEFEAPVDVREVQAFVNFYGGSCPRGPRGEVRIEYLNRIYTGTFAIASTEGNQGRSGRKQADCWAQIPVAEILRIDKESTEAVRAAN
Ga0170824_1044738501	3300031231	Forest Soil	YYKDHRSSPGREYEFIEFESPVDAREVEAFINFFKGRCPGGPRGEIRIEFDGRIYGAPFSISAEEGNLGRSGQSQQEFWTRIPVLEILKLSQPTARGG
Ga0302325_106560991	3300031234	Palsa	LYATPHRGAETLFFQHSRSPEGYYAKDHRASPGREYEYIEFESPVDVRKVRAFVNFYAGSCPGGPRGEVRLEFLNRIYSGTFAIASAEGNQGRSGPAQADFWTQIPIQEILRLNSASAEAARAAR
Ga0302325_112914521	3300031234	Palsa	LDLYATPRHGAETLFFQHPRSPEGYYAKDHRASPGREYEYIEFESPVDVRNVRGFVNFYAGSCPAGPRGDVRIEYLNRIYSGTFAIAASEGNQGRSGPAQADFWTQIPIQEILRINSASAQSASAAR
Ga0302324_1027990141	3300031236	Palsa	SPEGYYDKDHRSSPGREYEFIEFESPVDVRNVRGFVNFYAGSCPGGPRGEVRIEFLNRIYSGTFAIASSEGNQGRSGSAQADFWTQIPIQEILRLNGAAPEAARAAR
Ga0170820_124780551	3300031446	Forest Soil	HRSSPGREYEFIEFERPVDAREVEAYVNFYKGESRHGPRGEVRVEFDEKIYSAPFAIGALEGNRGRSGAGQEEFWQRIPVQQILKISRAE
Ga0306919_107033111	3300031879	Soil	SPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKIYAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN
Ga0306921_127781201	3300031912	Soil	QHPESPEGYYYKDHRSSPGREWEFVEFLNPVDARQVQAFVNFYKGSCPGGPRGEVRIEFDGRIYAAPFSIEAEEGNQGRSGKSQQDFWTPIPVQQILRLSSAG
Ga0310912_105957811	3300031941	Soil	TPREGAETLFFEHLRSPEGYYYKDHRSSPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKIYAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN
Ga0306926_102859324	3300031954	Soil	LYATPREGAETLFFEHLRSPEGYYYKDHRSSPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKIYAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN
Ga0306922_107695371	3300032001	Soil	GREYEFIEFEASVDAREVEAFVNFYKGYCPGGPHGEVRIEFDGRIYVAPFAISSEEGNLGRSSESQQEYWTRIPVQEILKLSQRTASRTPQN
Ga0335078_105386912	3300032805	Soil	MRSPEGYYNKDQRSSPGREYEFIEFESPVDVRKVQARVNFYAGSCPGGPNGEVRMEFLNRIYFGTFSIASSEGNQGRSGKSQRDFWTQIPIPQILGIDSVTERAAAEAR
Ga0335069_115240991	3300032893	Soil	YAAPRRGAEVLFFQHPRSPEGYYYKDHRSSPGREYEFIEFESPVDVYRVEAFVNFYKGSSPDGPHGEVRIEFDGRIYSAPFSLAASEGNRGRSGQGQEEFWTRIPVSEILKLAGASASNSPRSLRSAGGASGAAP
Ga0335071_119489371	3300032897	Soil	AEVLFFQHPRSPEGYYYKDHRSSPGREYEFIEFESPVDVYRVEAFVNFYKGSSPGGPHGEVRIEFDGRIYSAPFSLAASEGNRGRSGQGQEEFWTRIPVSEILKLAGASASNSPRSLRSAGGASGAAP
Ga0310914_100737541	3300033289	Soil	ETLFFEHLRSPEGYYYKDHRSSPGREYEFIEFQVPIDIREVSAFVNFYKGSCSGGPRGEVRIEYENKIYAGRFVIPASHGNKGRAGDTQEEYWARIPVQDILKLSRHTVKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074625

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences