Metagenome Family F074621

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074621
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	117 residues
Representative Sequence	VSVAGASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRAAGFTGVLVEGVDNAVAG
Number of Associated Samples	93
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.80 %
% of genes near scaffold ends (potentially truncated)	96.64 %
% of genes from short scaffolds (< 2000 bps)	86.55 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.160 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (36.975 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.64% β-sheet: 15.97% Coil/Unstructured: 51.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00293	NUDIX	64.71
PF02470	MlaD	3.36
PF02405	MlaE	1.68
PF00005	ABC_tran	0.84
PF04545	Sigma70_r4	0.84
PF12833	HTH_18	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.16 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.16 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.16 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	79.83 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	79.83 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	21.01 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	15.97 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.01 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	15.97 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.01 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	15.97 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.01 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	11.76 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.01 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	7.56 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.84 %
Unclassified	root	N/A	0.84 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.01 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	7.56 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.84 %
Unclassified	root	N/A	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002886\|JGI25612J43240_1007048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1594	Open in IMG/M
3300002907\|JGI25613J43889_10133358	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300002908\|JGI25382J43887_10395404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300002908\|JGI25382J43887_10496247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300002914\|JGI25617J43924_10147547	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300004463\|Ga0063356_100347406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1873	Open in IMG/M
3300005166\|Ga0066674_10038171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2142	Open in IMG/M
3300005166\|Ga0066674_10285685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	776	Open in IMG/M
3300005174\|Ga0066680_10796083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300005177\|Ga0066690_10307673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1071	Open in IMG/M
3300005178\|Ga0066688_10849604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	567	Open in IMG/M
3300005186\|Ga0066676_10464164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	858	Open in IMG/M
3300005295\|Ga0065707_10586085	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005406\|Ga0070703_10054675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1287	Open in IMG/M
3300005440\|Ga0070705_100982404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	684	Open in IMG/M
3300005440\|Ga0070705_101248692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	614	Open in IMG/M
3300005441\|Ga0070700_100832823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300005468\|Ga0070707_101770454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300005518\|Ga0070699_101208115	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	694	Open in IMG/M
3300005536\|Ga0070697_100894831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300005536\|Ga0070697_101974260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	522	Open in IMG/M
3300005536\|Ga0070697_102070549	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005545\|Ga0070695_100070885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2281	Open in IMG/M
3300005545\|Ga0070695_100488180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	950	Open in IMG/M
3300005545\|Ga0070695_100590051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	871	Open in IMG/M
3300005546\|Ga0070696_100516070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	953	Open in IMG/M
3300005553\|Ga0066695_10191318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1282	Open in IMG/M
3300005556\|Ga0066707_10560438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	735	Open in IMG/M
3300005569\|Ga0066705_10955003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300005574\|Ga0066694_10570704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	527	Open in IMG/M
3300005598\|Ga0066706_10218675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1471	Open in IMG/M
3300005895\|Ga0075277_1018388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	959	Open in IMG/M
3300006046\|Ga0066652_101807090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300006049\|Ga0075417_10484915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	620	Open in IMG/M
3300006797\|Ga0066659_10091374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2048	Open in IMG/M
3300006800\|Ga0066660_11189278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300006804\|Ga0079221_10741289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	692	Open in IMG/M
3300006806\|Ga0079220_11475094	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006844\|Ga0075428_100106041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3064	Open in IMG/M
3300006852\|Ga0075433_10151271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2065	Open in IMG/M
3300006852\|Ga0075433_10351061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1303	Open in IMG/M
3300006852\|Ga0075433_10768533	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300006852\|Ga0075433_11263906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	640	Open in IMG/M
3300006854\|Ga0075425_100257834	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300006854\|Ga0075425_100471012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1446	Open in IMG/M
3300006903\|Ga0075426_11380181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300006904\|Ga0075424_102536997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300006914\|Ga0075436_101523694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300007076\|Ga0075435_101304342	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300007076\|Ga0075435_101378197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	618	Open in IMG/M
3300007258\|Ga0099793_10234171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	884	Open in IMG/M
3300009012\|Ga0066710_104838373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300009090\|Ga0099827_10259868	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300009090\|Ga0099827_10533292	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009090\|Ga0099827_11027496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	715	Open in IMG/M
3300009137\|Ga0066709_100356426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2012	Open in IMG/M
3300009137\|Ga0066709_100967298	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300009137\|Ga0066709_102686775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	664	Open in IMG/M
3300009143\|Ga0099792_10073604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1730	Open in IMG/M
3300009143\|Ga0099792_10600417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	701	Open in IMG/M
3300009813\|Ga0105057_1114797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300010325\|Ga0134064_10468924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300010403\|Ga0134123_10902138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	890	Open in IMG/M
3300012198\|Ga0137364_10176106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1558	Open in IMG/M
3300012198\|Ga0137364_10177802	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300012200\|Ga0137382_11295313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	515	Open in IMG/M
3300012203\|Ga0137399_11013124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	699	Open in IMG/M
3300012204\|Ga0137374_10642612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	804	Open in IMG/M
3300012205\|Ga0137362_10139346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2068	Open in IMG/M
3300012205\|Ga0137362_11070173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300012208\|Ga0137376_10063478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	3054	Open in IMG/M
3300012210\|Ga0137378_10171105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2018	Open in IMG/M
3300012351\|Ga0137386_11066832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300012354\|Ga0137366_10184086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1566	Open in IMG/M
3300012359\|Ga0137385_10099996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2571	Open in IMG/M
3300012361\|Ga0137360_10246184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1466	Open in IMG/M
3300012683\|Ga0137398_10723239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	693	Open in IMG/M
3300012683\|Ga0137398_11115222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300012918\|Ga0137396_10520765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300012927\|Ga0137416_10572211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	981	Open in IMG/M
3300012929\|Ga0137404_11471337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	630	Open in IMG/M
3300012930\|Ga0137407_10423406	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300012948\|Ga0126375_12052293	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300012972\|Ga0134077_10303810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300014154\|Ga0134075_10242627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	779	Open in IMG/M
3300015371\|Ga0132258_10175631	All Organisms → cellular organisms → Bacteria	5169	Open in IMG/M
3300015371\|Ga0132258_13895122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1015	Open in IMG/M
3300017656\|Ga0134112_10365292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	591	Open in IMG/M
3300017657\|Ga0134074_1192948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300017659\|Ga0134083_10169230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	891	Open in IMG/M
3300018078\|Ga0184612_10148962	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300018433\|Ga0066667_10280854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1282	Open in IMG/M
3300018433\|Ga0066667_11030045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	711	Open in IMG/M
3300018433\|Ga0066667_11265135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	644	Open in IMG/M
3300018482\|Ga0066669_10775419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	848	Open in IMG/M
3300018482\|Ga0066669_11921904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	551	Open in IMG/M
3300020170\|Ga0179594_10094664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1068	Open in IMG/M
3300026307\|Ga0209469_1022119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2223	Open in IMG/M
3300026313\|Ga0209761_1050863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2322	Open in IMG/M
3300026324\|Ga0209470_1095077	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300026326\|Ga0209801_1120254	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300026332\|Ga0209803_1120453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1050	Open in IMG/M
3300026333\|Ga0209158_1082974	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300026528\|Ga0209378_1064300	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300026537\|Ga0209157_1234163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	745	Open in IMG/M
3300026551\|Ga0209648_10221032	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300027643\|Ga0209076_1091252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	865	Open in IMG/M
3300027765\|Ga0209073_10195271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	767	Open in IMG/M
3300027765\|Ga0209073_10381519	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300027873\|Ga0209814_10369095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300027882\|Ga0209590_10174940	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300027903\|Ga0209488_10445128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	955	Open in IMG/M
3300027909\|Ga0209382_10777563	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300027909\|Ga0209382_11113525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300028791\|Ga0307290_10274893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	617	Open in IMG/M
3300028793\|Ga0307299_10017759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2540	Open in IMG/M
3300028811\|Ga0307292_10196648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300033407\|Ga0214472_10517843	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.03%
Host-Associated	Host-Associated	15.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Plants	Host-Associated → Plants	15.97%
Aquatic	Environmental → Aquatic	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Sediment	Environmental → Aquatic → Sediment	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Sand	Environmental → Terrestrial → Soil → Sand	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25612J43240_10070483	3300002886	Grasslands Soil	VSVAGASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRDAGFTGVL
JGI25613J43889_101333582	3300002907	Grasslands Soil	VTPVVPVFHPRREARRALKQGYPRGTGSVRLCRTLQGVERLLQQRLVDAVVLDVRTCAAEGIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRA
JGI25382J43887_103954041	3300002908	Grasslands Soil	MKAAAASAYPVVPVFHPRREARRAVKRGYPRGSGTVRLCRSVQAVKQLLEQRLVDAVVLDVRHCDGDGLALPASFPRIPMYALSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGE
JGI25382J43887_104962472	3300002908	Grasslands Soil	VTAAAAAYPVVPVFHPRREARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRHCDGAGLALPARFPRIPMYALSAVRPDDGALLESCRDAGFCVLVEGVDNAVAGEWIAAR
JGI25617J43924_101475471	3300002914	Grasslands Soil	VTAIVPVFHPRREARRAVQRGYPRRVGTVRLCRTALAVERLLAERLVDAVVLDIKADEALVGLPARFPRIPMFVLSAFKPEDGALLASCHAAGFAGVLVEGVDNAVAGEWVSARTAQ
Ga0063356_1003474061	3300004463	Arabidopsis Thaliana Rhizosphere	MSASATYPIVPVFHPRRDARRALKLGYPRGAGRVRLCRTIQAVERLLEHRLVDAVVLDVRHCDGEGFALPARFPRIPMYALSAVRPDDGALLASCREAGFTGVLVEGVDNAVAGEWIAA
Ga0066674_100381711	3300005166	Soil	VSGRNGGGGAAAAAYPVVPVFHPRRDARRAVQRGYPRGAGSVRLCRTIEAVERLLEQRLVDAVVLDVRHCDAVGLSLPARFPRIPMYALCAVRPDDGALLASC
Ga0066674_102856852	3300005166	Soil	MTAAAYPIVPVFHPRGEARRALKKGYPRGRGSMRFCRSIQAVERLLEQRLVDAVVLDVRNCDGIGLALPARFPRIPMYALAALRPDDGALLASCRDAGFTMLVEGVDNAMAGEWIA
Ga0066680_107960831	3300005174	Soil	MKATGASAYPVVPVFHPRREARRALKRGYPRGSGSVRLCRSVQAVKRLLEQRLVDAVVLDVRHCDGEGLALPASFPRIPMYVLSAVRPDDGALLESCRDAGFTGVLVEGVDNAVAGEWIA
Ga0066690_103076731	3300005177	Soil	MSGGAAYPVVPVFHPRREARRALQRGYPRGAGSVRLCRTIQAVQRLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRDAGFTGVLVEGVDNAIAGEWIAA
Ga0066688_108496042	3300005178	Soil	MTATGAAYPVVPVFHPRRDARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRTCDGAGLMLPARFPRIPMYALSAVRPDDGALLASCRDAGFCVLVEGVDNAVAGEWIAARTAQVA
Ga0066676_104641641	3300005186	Soil	MTAWGGEAGAAAYPVVPVFHPRRDARRALKEGYPHGRGSVRLCRSIQAVERLIEQRLVDAIVLDVRNCGGAGLALPARFPRIPMYALSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQVSRRLALAD
Ga0065707_105860852	3300005295	Switchgrass Rhizosphere	VTSPPIVAVFHPRRDARRAVKQGYPRATGSVRLCRTLQGVERLLQQRLVDAVVLDVRTGAEDVIALPARFPRIPMYALSAVRPEDGSLLASCHRAGFAGVLVEGVDNSVAGEWIAARTAQVARRAALADA
Ga0070703_100546751	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSSGPGGAAYPVVPVFHPRREARHAVQRGYPHGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLSSCQEAGFAGVLV
Ga0070705_1009824041	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRVGHGAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVKQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAVAGEW
Ga0070705_1012486921	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNGTGPTPAAYPVVPVFHPRREARRAIKRGYPRRAGSVRLCRSIQEVERLLDQRLIDAVVLDIRHCDGQGLELPARFPRIPMYALSAIRPEDGTLLAACRDAGFTGILVEGVDNAVAGEWIAARTAQVARRAAL
Ga0070700_1008328231	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSVAGSAYPVVPVFHPRPEARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCREAGFTG
Ga0070707_1017704541	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSRAGGGAAAYPVVPVFHPRREARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCREAGFTGVLVEGVDNA
Ga0070699_1012081151	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKAAGASAYPVVPVFHPRREARRALKRGYPRGGGSVRLCRSVQGVKRLLEQRLVDAVVLDVRHCDGDGLALPASFPRIPMYALSAVRPDDGALLESCRDAGFTGVLVEGVDNAVAGEWIAART
Ga0070697_1008948312	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKAAGASAYPVVPVFHPRREARRALKRGYPRGSGSVRLCRSVQGVKRLLEQRLVDAVVLDVRHCDGEGLALPASFPRIPMYALSAVRPDDGALLESCRDAGFTGV
Ga0070697_1019742602	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTPLVPVFHPRRDARSAVKQGYPRGTGSVRLCRTVQEVERLLQQRLVDAVVLDVRTCAAEGFGLPARFPRIPMYALSAVRPDDGALLASCHRAGFAGVLVEGVDNAVAGEW
Ga0070697_1020705491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTPVVPVFHPRREARRAVKQGYPRRTGSVLLCRTLQGVERLLQQRLVDAVVLDVRSCAAEGIGLPARFPRIPVYALSAVRPDDGALLASCQRAGFAGVLVEGVDN
Ga0070695_1000708854	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNGTGPTPAAYPVVPVFHPRREARRAIKRGYPRRAGSVRLCRSIQEVERLLDQRLIDAVVLDIRHCDGQGLELPARFPRIPMYALSAIRPEDGTLLAACRDAGFTGILVEGVDNAVAGEWIAARTAQVARRAALADA
Ga0070695_1004881801	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRVGHGAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVKQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAVAGEWIAARTAQVARRRALADA
Ga0070695_1005900512	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTSPPIVAVFHPRRDARRAVKQGYPRATGSVRLCRTLQGVERLLQQRLVDAVVLDVRTGAEDVIGLPARFPRIPMYALSAVRPEDGSLVASCHRAGFAGVLVEGVDNSVA
Ga0070696_1005160701	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNGTGPTPAAYPVVPVFHPRREARRAIKRGYPRRAGSVRLCRSIQEVERLLDQRLIDAVVLDIRHCDGQGLELPARFPRIPMYALSAIRPEDGTLLAACRDAGFTGILVEGVDNAVAGEWIAARTAQVARRAALADAPRLLR
Ga0066695_101913181	3300005553	Soil	VTPVVPVFHPRREARRAVKQGYPRRAGTVRLCRTFQAVERLLDQRLVDAVVLDVRSCVAAGLALPVRFPRIPVYALSAVRPEDAPLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRAALA
Ga0066707_105604381	3300005556	Soil	VTAAATAYPVVPVFHPRREARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRHCDREGLALPTRFPRIPMYALSAVRPDDGALLESCRDAGFCVLVEGVDNAVAGEWIAA
Ga0066705_109550032	3300005569	Soil	VVPVFHPRREARRAVQRGYPRGAGTVRLCRGFGDVERLLAQRLVDAVVLDVKAAPAAGMALPARFPRIPIYVLSAFRPQDGQLLAACHAAGFAGILVEGVDNALAGE
Ga0066694_105707041	3300005574	Soil	VTPVVPVFHPRREARRAVKQGYPRRAGTVRLCRTFQAVERLLDQRLVDAVVLDVRSCVAAGLALPVRFPRIPVYALSAVRPEDAPLLASCQRAGFAGVLVEGVDN
Ga0066706_102186753	3300005598	Soil	MSVAAASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRDAGFT
Ga0075277_10183882	3300005895	Rice Paddy Soil	MSTAARPAYPVVPVFHPRREARRAVKRGYPRAAGSVRLCRTVQAVERLLEQRLVDAVVLDARNCDGLGLTLPKRFPRIPMYALSAVRPDDGALLTSCRDAGFSGVLVEGVDNAMAGEWIAARTAQMSRRLAWPTLPGSCA*
Ga0066652_1018070901	3300006046	Soil	VSVAGASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRAAGFTGVLVEGVDNAVAG
Ga0075417_104849151	3300006049	Populus Rhizosphere	MRVAHGPVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAVAGEWIAART
Ga0066659_100913744	3300006797	Soil	VTAAAAAYPVVPVFHPRREARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRHCDGEGLALPTRFPRIPMYALSAVRPDDGALLESCRDAGFCVLVEGVDNAVAGEWIAARTAQV
Ga0066660_111892781	3300006800	Soil	MTAVVPVFHPRAEPRRAVKRGYPRGSGTVRLCRTLAAVERLLYQRLVDAVVLDVKAAPVAALALPGRFPRIPMYVLSALRPDDGALLATCHASGFAGLLVE
Ga0079221_107412891	3300006804	Agricultural Soil	VSVAGSAYPVVPVFHPRREARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDARHCDGAGLTLPARFPRIPMYALCAVRPDDGALLASCRDAGFTGVLVEGVDNAV
Ga0079220_114750941	3300006806	Agricultural Soil	VSAIVPVYHPRRDARVAVRRGYPRRSGGVRLCRGLAGVERLLAARLVDAVVLDVKADPAPALALAGRYPRIPVFALSAFKADDGRLLAACLAAGFAGVLVEGVDN
Ga0075428_1001060411	3300006844	Populus Rhizosphere	MTPVVPVFHPRREARAAVKQGYPRATGSVRLCRTLQGVERLLQQRLVDAVVLDVRSGAADVIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRAALA
Ga0075433_101512711	3300006852	Populus Rhizosphere	VSVAGSAYPVVPVFHPRREARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCREAGFTGVLVEGVDNAVAGEWI
Ga0075433_103510613	3300006852	Populus Rhizosphere	MRAAHAAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAVAGEWIA
Ga0075433_107685331	3300006852	Populus Rhizosphere	MSRANGGNRGGVGGGTVVAAYPLVPVFHPRREARRAIKRGYPRGAGSVRLCRSIQEVRRLLEQRLVDAVVLDIRHCDGEGLTLPARFPRIPMYALSAVRPEDGALLASCREAGFRGILVEGVDNA
Ga0075433_112639061	3300006852	Populus Rhizosphere	VPVFHPRREARSAVKQGYPRATGSVRFCRTLQGVERLLQQRLVDAVVLDVRSGAADVIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRAA
Ga0075425_1002578341	3300006854	Populus Rhizosphere	VTPVVPVFHPRREARRAVKQGYPRGTGSVRLCRTLQGVERLLQQRLVDAVVLDVRTCAAEGIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFA
Ga0075425_1004710121	3300006854	Populus Rhizosphere	VSVAGSAYPVVPVFHPRREARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCREAGFTGVLVEGVDNAVAGEWIAARTAQV
Ga0075426_113801812	3300006903	Populus Rhizosphere	MRAAHAAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLV
Ga0075424_1025369971	3300006904	Populus Rhizosphere	MSRANGGNGGGGTVVAAYPLVPVFHPRREARRAIKRGYPRGAGSVRLCRSIQEVRRLLEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSAVRPEDGALLASCREARFTGILVEGVDNAVAGEWIAARTAQVA
Ga0075436_1015236941	3300006914	Populus Rhizosphere	MSAAAPAAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAV
Ga0075435_1013043422	3300007076	Populus Rhizosphere	VTPVVPVFHPRREARRAVKQGYPRGTGSVRLCRTLQGVERLLQQRLVDAVVLDVRTCAAEGIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVD
Ga0075435_1013781972	3300007076	Populus Rhizosphere	MKAAGASAYPVVPVFHPRREARRAVKRGYPRGSGSVRLCRSVQGVKRLLEQRLVDAVVLDVRHCDGEGLALPASFPRIPMYALSAVRPDDGALLESCRDAGFTGVLVEGVDNAVAGEWIAARTAQVARRVALAD
Ga0099793_102341711	3300007258	Vadose Zone Soil	VTPVVPVFHPRREARRALKQGYPRGTGSVRLCRTVQGVERLLQQRLVDAVVLDVRTCPAEGIGLPARFPRIPMYALSAVRPDDGALLASCQRAGF
Ga0066710_1048383732	3300009012	Grasslands Soil	VTAVVPVYHPRREARRALKSGYPRDAGFVRLCRSLQGVERLLYQRLVDAVVLDVTAPSAAAAALALPARFPRIPMYVLSALRPDDGALLAACHAAGFAGILVEGVD
Ga0099827_102598681	3300009090	Vadose Zone Soil	VIAIVPVFHPRRETRRAVQRGYPRRAGSVRLCRSVPAVERLLAERLVDAAVLDIKEDDSALTLPARFPRIPMYVLSAFKSEDGALLARCCAAGF
Ga0099827_105332923	3300009090	Vadose Zone Soil	VSGGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLATCRDAGF
Ga0099827_110274962	3300009090	Vadose Zone Soil	MSRAGGVAAAAAYPVVPVFHPRREARRALKRGYPRHAGSIRLCRSIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCREAGFTGVLVEGVDNAVAGEWIAARTAQVARRSALADAPRLQR
Ga0066709_1003564264	3300009137	Grasslands Soil	VSGGAAYPVVPVFHPRREARRAVQLGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRHAGFTGVL
Ga0066709_1009672981	3300009137	Grasslands Soil	VTAAATAYPVVPVFHPRREARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRHCDREGLALPTRFPRIPMYALSAVRPDDGALLESCRDAGFCVLVEGVDNAVAG
Ga0066709_1026867751	3300009137	Grasslands Soil	MSAAMVSAYPVVPVFHPRRDARRALKRGYPRRVGSVRLCRTMHAVKQLLDERLVDAVVLDVRHCDGEGLELPARFPRIPMYVLSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWI
Ga0099792_100736041	3300009143	Vadose Zone Soil	MTAVVPVFNPRAEPRRAVKRGYPRDAGSVRLCRNLAAVERLLYQRLVDAVVLDVKTAPAAALALPARFPRIPMFVLSAVRPDEGPLLAACDAAGFAGVL
Ga0099792_106004171	3300009143	Vadose Zone Soil	VTPVVPVFHPRRDARRAVKQGYPRGTGSVRLCRTLQGVERLLQQRLVDAVVLDVRTCAADGIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVDNAVAGEWI
Ga0105057_11147972	3300009813	Groundwater Sand	MSATGVAAYPVVPVFHPRRDARRAVKRGYPRGAGSVRLCRSIQAVERLLEQRLVDAVVLDVRHCDGDGLALPARYPRIPMYALSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQVARRSALA
Ga0134064_104689241	3300010325	Grasslands Soil	VSAAAASGYPVVPVFHPRREARRALKRGYPRGAGSVRLCRNIQAVERLLEQRLVDAVVLDVRSCDGEGLTLPARFPRIPMYALSVVRPEDGALLTSCRDAGF
Ga0134123_109021383	3300010403	Terrestrial Soil	MSSGPGGAAYPVVPVFHPRREARHAVQRGYPHGAGSVRLCRTIQAVERLLEQPLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLSSCQEAGFAGVLVEGV
Ga0137364_101761063	3300012198	Vadose Zone Soil	VTYPVIPVFHPRRDMRAAIKRGYPRGPGGGGTVRLCPSIQAVERLLEQKLVDAVVLDVRHCNGEGLALPARFPRIPMYALSALRPDDGALLAACRDAGFAGVLVEGVDNSVAGEWIAARTAQVARR
Ga0137364_101778021	3300012198	Vadose Zone Soil	MSRANGGNVAGAAVAAYPVVPVFHPRREARRAIKRGYPRGAGSVRLCRSIQEVRRLLEQRLVDAVVLDVRHCDGEGLTLPARFPRIPMYALSAVRPEDGALLASCREAGFTGILVEGVDNAVAGEWIAARTAQVARRAALAD
Ga0137382_112953131	3300012200	Vadose Zone Soil	VTAVVPVFSPRAEPRRAVKRGYPRAAGSVRLCRDLAAVERLLYQRLVDAVVLDVKTAPAAALALPARFSRIPMFVLSAVRSDDGPLLAACGAAGFAGVLVEGVDNA
Ga0137399_110131241	3300012203	Vadose Zone Soil	VSGSGGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARNCDGVGLTLPSRFPRIPMYALCAVRPDDGALLSACRDAGFTSVLVEGVDNAIAGEWIAARTAQVAR
Ga0137374_106426122	3300012204	Vadose Zone Soil	LTPVVPVFHPRREARRAVKQGYPRATGSVRLCRTLQDVERLLQQRLVDAVVLDVRSGAADVIGLPARFPRIPMYALSAVRPEDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRAALADA
Ga0137362_101393464	3300012205	Vadose Zone Soil	VSGSAGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARNCDGVGLTLPARFPRIPMYALCAVRPDDGALLSACRDAGFTGVLVEGVDNAIAGEWIA
Ga0137362_110701732	3300012205	Vadose Zone Soil	MSGGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVQRLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGV
Ga0137376_100634781	3300012208	Vadose Zone Soil	MTAAAADPGVPVFHPRRDARRALKKGYPHGRGSVRLCRSIQAVERLIEQRLVDAIVLDVRNCGGAGLALPARFPRIPMYALSAVRPDDGALLASCRDAGFTGVLVE
Ga0137378_101711053	3300012210	Vadose Zone Soil	VVPVFHPRREARSAVKRGYPRGAGSVRLCRSLQAVERLLLRRLVDAVVLDVKAPAPPPPAATALALPGRFPRIPMFALSTFRSDDGALLVSCHAAGFAGILVEGVDNAVAGE
Ga0137386_110668321	3300012351	Vadose Zone Soil	VSGGAAYPVVPVFHPRREARRAVQRGYPRGAGTVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGGGLTLPARFPRIPMYALCAVRPDDGALLSSCRDAGFTGVLVEGVDNAIAGEWIAA
Ga0137366_101840861	3300012354	Vadose Zone Soil	VVPVFHPRREARSAVKRGYPRGAGSVRLCRSLQAVERLLLRRLVDAVVLDVKAPAPPPPAATALALPGRFPRIPMFALSTFRSDDGALLVSCHAAGFAGILVEGVDNAVAGECV
Ga0137385_100999964	3300012359	Vadose Zone Soil	VRVAAASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRDAGFTVLVEGVDNAVAGEWIAARTAQVARRTALADAP
Ga0137360_102461843	3300012361	Vadose Zone Soil	MTAVVPVFSPRAEPRRAVKRGYPRDAGSVRLCRNLEAVERLLYHRLVDAVVLDVKTAPAAALALPARFPRIPMFVLSAVRSDDGPLLAACGAAGFAGVLVEGVDNAVAGEWIAARTAQVARR
Ga0137398_107232391	3300012683	Vadose Zone Soil	MTAVVPVFNPRAEPRRAVKRGYPRGAGSVRLCRNLAAVERLLYQRLVDAVVLDVKTAPTAALALPARFPRIPMFVLSALRSDDGPLLAACDAAGFAGVLVEGVDNAV
Ga0137398_111152221	3300012683	Vadose Zone Soil	VTAIVRVFHPRREARRAVQRGYPRLLGRVRLCASPQALESLLASRLVDAVVLDVKAVPQSEAALALPSRFPRIPVFALSAFRPEDGALVVACQRAGFAGVLVETVDHPVAGEWIARRTAQQARRRALADAPALLRLTEKLQLAAWEEVWR
Ga0137396_105207651	3300012918	Vadose Zone Soil	MSGGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVQRLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRDAGFTGVLVEGV
Ga0137416_105722111	3300012927	Vadose Zone Soil	MSGGAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVQRLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLSACRDAGFTGVLVEGVDNAIAGEWIAARTAQVARRS
Ga0137404_114713372	3300012929	Vadose Zone Soil	VPVFNPRAEPRRAVKRGYPRDAGSVRLCRTLAAVERLLYQRLVDAVVLDVKTAPAPALALPARFPRIPMFVLSALRSDDGPLLAACDAAGFAGVLVEGVDNAVAGEWIAARTAQVARRAALADA
Ga0137407_104234063	3300012930	Vadose Zone Soil	VSGSAGAAYPVVPVFHPRREARRAVQGGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDARNCDGVGLTLPARFPRIPMYALCAVRPDDGALLSACRDAGFTGVLVEGVDNAIAGEWIAARTAQVARRLAL
Ga0126375_120522931	3300012948	Tropical Forest Soil	MNRASGGTGGRAGAASIAYPVVPVFHPRRDARRAIKRGYPRGAGSVRLCRSIQEVSRLLEQRLVDAVVLDIRHCEGEGLTLPARFPRIPMYALSAVRPEDGALLAACRDAGFTGILVEGVDNAVAGEWIAARTAQVARRAALADAPRL
Ga0134077_103038101	3300012972	Grasslands Soil	VPVFHPRRDARRAVQRGYPRGAGSVRLCRTIEAVERLLEQRLVDAVVLDVRHCDAVGLSLPARFPRIPMYALCAVRPDDGALLASCRDAGFTGVLVEGVDNAVA
Ga0134075_102426271	3300014154	Grasslands Soil	VSGGAAYPVVPVFHPRREARRAVQLGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCREAGFTGVLVEGVDNAIAGEWIAARTAQVARRSA
Ga0132258_101756311	3300015371	Arabidopsis Rhizosphere	MTAAYPIVPVFHPRREARRALKKGYPRGRGSVRLCRSIQAVERLLEQRLVDAVVLDVRSCDGVGLKLPTRFPRIPMYALSALRPDDGALLASCRDAGFTVLVEGVDNAVAGEWIAARTAQVARRS
Ga0132258_138951221	3300015371	Arabidopsis Rhizosphere	MRAAHAAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVL
Ga0134112_103652922	3300017656	Grasslands Soil	MSGAGAAAYPVVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRNCDDVGRTLPARFPRIPMYALCAVRPDDGALLASCREAGFSGVLVEGVDNAIAGEWIAARTAQVARRSALAD
Ga0134074_11929481	3300017657	Grasslands Soil	MSRANGGNVAGAAVAAYPVVPVFHPRREARRAIKRGYPRGAGSVRLCRSIQEVRRLLEQRLVDAVVLDVRHCDGEGLTLPARFPRIPMYALSAVRPEDGALLASCREAG
Ga0134083_101692302	3300017659	Grasslands Soil	VRGRGGGGVATASAYPVVPVFHPRREARRALKRGYPRGVGSVRLCRTIQAVKQLLDERLVDAVVLDVRNCDGEGLELPARFPRIPMYALSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQVARRRALADAPRLLR
Ga0184612_101489623	3300018078	Groundwater Sediment	VTPVVPVFHPRREARRAVKQGYPRAKGSVRLCRTLQGVERLLQQRLVDAVVLDVRNCAPEGIGLPARFPRIPMYALSAVRPEDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQVARRAALADAPRLL
Ga0066667_102808543	3300018433	Grasslands Soil	MSAAMVSAYPVVPVFHPRRDARRALKRGYPRRVGSVRLCRTMHAVKQLLDERLVDAVVLDVRHCDGEGLELPARFPRIPMYVLSAVRPDDGALLASCRDARLTAVADGGV
Ga0066667_110300451	3300018433	Grasslands Soil	MSGAGAAAYPVVPVFHPRRDARRAVKRGYPRGAGTVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGGGLTLPARFPRIPMYALCAVRPDDGALLSSCRE
Ga0066667_112651352	3300018433	Grasslands Soil	MSAMASAYPVVPVFHPRRDARRALKRGYPRRVGSVRLCRSIHAVKQLLDERLVDAVVLDVRNCDGEGLELPARFPRIPMYVLSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWI
Ga0066669_107754191	3300018482	Grasslands Soil	MTAVVPVFHPRAEPRRAVKRGYPRQAGSVRLCRTLGAVERLLYQRLVDAVVLDVKAAPEAALALPARFPRIPMFVLSALRPDDGALLATCHASGFAGLLVE
Ga0066669_119219041	3300018482	Grasslands Soil	MSAMASAYPVVPVFHPRRDARRALKRGYPRRVGSVRLCRSIHAVKQLLDERLVDAVVLDVRNCDGEGLELPARFPRIPMYVLSAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEW
Ga0179594_100946643	3300020170	Vadose Zone Soil	VSGRNGGYPIVPVFHPRREARRAVQRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDSVGLSLPARFPRIPMYALCAVRPDDGALLASCRDAGFTGVLVEGV
Ga0209438_11424901	3300026285	Grasslands Soil	VQRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDSVGLSLPARFPRIPMYALCAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQVARR
Ga0209469_10221191	3300026307	Soil	VSGRNGGGGAAAAAYPVVPVFHPRRDARRAVQRGYPRGAGSVRLCRTIEAVERLLEQRLVDAVVLDVRHCDAVGLSLPARFPRIPMYALCAVRPDDGALL
Ga0209761_10508634	3300026313	Grasslands Soil	VTAVVAVYHPRREGRRALKSGYPRDAGVVRLCRSLQGVERLLYQRLVDAVVLDVTAPSAAAAALALPARFPRIPMYVLSALRPDDGALLAACHAAGVAGILV
Ga0209470_10950773	3300026324	Soil	VSGGAAYPVVPVFHPRREARRAVQLGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCREAGFTGVLVEGVDNAIAGEWIAARTAQVARRSALAD
Ga0209801_11202543	3300026326	Soil	VSGGAAYPVVPVFHPRREARRAVQLGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRDTGFTGVLVEGVDNAIAGEWIAARTA
Ga0209803_11204531	3300026332	Soil	VSGGAAYPVVPVFHPRREARRAVQLGYPRGAGSVRLCRTIQAVQRLLDQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRDAGFTGVLVEG
Ga0209158_10829741	3300026333	Soil	MSGGAAYPVVPVFHPRREARRALQRGYPRGAGSVRLCRTIQAVQRLLEQRLVDAVVLDVRNCDGVGLTLPARFPRIPMYALCAVRPDDGALLAACRDAGFTGVLVEGVDNAIAGEWIAARTAQVARRS
Ga0209378_10643003	3300026528	Soil	MSVAAASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRDAGFTVLVEGVDNAVAGEWIAARTAQVARRTALADAPR
Ga0209157_12341632	3300026537	Soil	VTPPAVVPVFHPRREARGAVKRGYPRGAGSVRLCRSLQAVERLLLRRLVDAVVLDVKAPAPPPPAATAFALPARFPRIPMFALSTFRSDDGALLVSCHAAGFAGILVEGVDNAVAG
Ga0209648_102210321	3300026551	Grasslands Soil	VTAAATAYPVVPVFHPRREARRAIKRGYPRSAGSVRLCRSLQAVERLLAQRLVDAVVIDVRHCDGEGLALPARFPRIPMYALSAVRPDDGALLESCRDAGFCVLVEGVDNAVAGEWIAA
Ga0209076_10912522	3300027643	Vadose Zone Soil	VTPVVPVFHPRREARRALKQGYPRGTGSVRLCRTVQGVERLLQQRLVDAVVLDVRTCPAEGIGLPARFPRIPMYALSAVRPDDGALLASCQRAGFAGTPRH
Ga0209073_101952711	3300027765	Agricultural Soil	VSVAGSAYPVVPVFHPRREARRALKRGYPRNAGSVRLCRSIQAVERLLEQRLVDAVVLDARHCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCRDAGFTGVLVEGVDNAVAGEWIAARTAQV
Ga0209073_103815192	3300027765	Agricultural Soil	VSAIVPVYHPRRDARVAVRRGYPRRSGGVRLCRGLAGVERLLAARLVDAVVLDVKADPAPALALAGRYPRIPVFALSAFKADDGRLLAACLAAGFAGVLVEG
Ga0209814_103690952	3300027873	Populus Rhizosphere	MRAAHAAVSAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRSIQAVEQLIEQRLVDAVVLDIRHCDGDGLTLPARFPRIPMYALSALRPEDGALLAACREAGFTGVLVEGVDNAVAGEWIAART
Ga0209590_101749403	3300027882	Vadose Zone Soil	MSVAAASAYPVVPVFHPRREARRAVKRGYPRGAGSVRLCRTIQAVERLLEQRLVDAVVLDVRHCDGVGLTLPARFPRIPMYALSAVRPDDGALLASCRDAGFTVLVEGVDNAVAGEWIAARTAQ
Ga0209488_104451283	3300027903	Vadose Zone Soil	MTAVVPVFSPRAEPRRAVKRGYPRDAGSVRLCRNLAAVERLLYQRLVDAVVLDVKTAPAAALALPARFPRIPMFVLSAVRSEDGPLLAACGAAGFAGVLVEGVDNAV
Ga0209382_107775631	3300027909	Populus Rhizosphere	VSASAAYPIVPVFHPRRDARRALKRGYPRGAARVRLCRTIQAVERLLQQRLVDAVVLDVRHCDGEGLALPRRFPRIPMYALSAVRPEDGPLLAACRDAGFTGVLVEGVDNAVAGEWIAARTAQVARRDALADA
Ga0209382_111135251	3300027909	Populus Rhizosphere	MKTATGAGAGPAVYPVVPVFHSRREARRAIKRGYPRRAGSVRLCRSIQEVERLIEQRLVDAVVLDIRHCDGKGLDLPARFPRIPMYALSALRPEDGTLLASCREAGFTGILVEGVDN
Ga0307290_102748932	3300028791	Soil	MTGGATTAVVPVFHPRRDARRALQQGYPRGRGSVRLCRTLAAVERMLQQRLVDAVVLDVRTCAGEGLALPARFPHIPMYALSALRPEDGTLLASCQRAGFAGVL
Ga0307299_100177591	3300028793	Soil	MTPVVPVFHPRREARRAVKQGYPRAIGSVRLCRTLQGVERLLQQRLVDAVVLDVRGGAADVIGLPARFPRIPMYALSAVRPDDGSLLASCQRAGFAGVLVEGVDNAVAGEWIAARTAQ
Ga0307292_101966482	3300028811	Soil	MSAGAAGPAAYPVVLVFHPRLEARRAVQRGYPRGAGGVRLCRTIQAVVRLLEQRLVDAVVLDARNCDGVGLTLPARFPRIPMYALCAVRPDDGALLASCRDAGFTD
Ga0214472_105178433	3300033407	Soil	VTSGPVVPVFHPRCEARRAVKQGYPRAAGSVRLCRSLQAVERLLAQRLVDAVVLDVRSCAAAGLALPARFPRIPMYALSALRPDDGALLASCQQAGFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074621

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences