Metagenome Family F074610

Overview

Basic Information

• Family ID: F074610
• Family Type: Metagenome
• Number of Sequences: 119
• Average Sequence Length: 40 residues
• Representative Sequence: TRAQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH
• Number of Associated Samples: 107
• Number of Associated Scaffolds: 119

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 5.08 %
• % of genes near scaffold ends (potentially truncated): 94.12 %
• % of genes from short scaffolds (< 2000 bps): 94.12 %
• Associated GOLD sequencing projects: 98
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (63.866 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.412 % of family members)
• Environment Ontology (ENVO): Unclassified (26.050 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (43.697 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 29.85%
  β-sheet: 0.00%
  Coil/Unstructured: 70.15%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00230	MIP	9.24
PF00381	PTS-HPr	6.72
PF13738	Pyr_redox_3	3.36
PF00296	Bac_luciferase	2.52
PF13450	NAD_binding_8	2.52
PF03747	ADP_ribosyl_GH	2.52
PF12704	MacB_PCD	1.68
PF02687	FtsX	1.68
PF00406	ADK	1.68
PF03435	Sacchrp_dh_NADP	1.68
PF02705	K_trans	1.68
PF05721	PhyH	1.68
PF13556	HTH_30	1.68
PF00190	Cupin_1	1.68
PF02733	Dak1	0.84
PF03109	ABC1	0.84
PF00743	FMO-like	0.84
PF08386	Abhydrolase_4	0.84
PF09339	HTH_IclR	0.84
PF02518	HATPase_c	0.84
PF00753	Lactamase_B	0.84
PF12762	DDE_Tnp_IS1595	0.84
PF00248	Aldo_ket_red	0.84
PF07969	Amidohydro_3	0.84
PF00005	ABC_tran	0.84
PF08327	AHSA1	0.84
PF13189	Cytidylate_kin2	0.84
PF00486	Trans_reg_C	0.84
PF00440	TetR_N	0.84
PF00903	Glyoxalase	0.84
PF13483	Lactamase_B_3	0.84
PF12680	SnoaL_2	0.84
PF08281	Sigma70_r4_2	0.84
PF12802	MarR_2	0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	9.24
COG1925	HPr or related phosphotransfer protein	Signal transduction mechanisms [T]	6.72
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	2.52
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.52
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	1.68
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	1.68
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.68
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.84
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.84
COG2376	Dihydroxyacetone kinase	Carbohydrate transport and metabolism [G]	0.84

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.87 %
Unclassified	root	N/A	36.13 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.87 %
Unclassified	root	N/A	36.13 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.87 %
Unclassified	root	N/A	36.13 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.26 %
Unclassified	root	N/A	36.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.90 %
Unclassified	root	N/A	36.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.52 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.82 %
Unclassified	root	N/A	36.13 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.52 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10.08 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.20 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.52 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.68 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.68 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.84 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.20 %
Leisingera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	2.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.68 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.84 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.84 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.20 %
Leisingera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	2.52 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.84 %
Klenkia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.84 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.20 %
Leisingera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	2.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Klenkia taihuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia taihuensis	0.84 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.84 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.84 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.20 %
Leisingera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	2.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.68 %
Amycolatopsis sp. FDAARGOS 1241	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	0.84 %
Frankia sp. Iso899	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	0.84 %
Klenkia taihuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia taihuensis	0.84 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005169|Ga0066810_10046544	Not Available	834
3300005172|Ga0066683_10722223	All Organisms → cellular organisms → Bacteria	588
3300005177|Ga0066690_10183222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1388
3300005178|Ga0066688_10919784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538
3300005434|Ga0070709_11789393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia taihuensis	502
3300005435|Ga0070714_102356952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517
3300005542|Ga0070732_10250969	All Organisms → cellular organisms → Bacteria	1060
3300005561|Ga0066699_10458581	All Organisms → cellular organisms → Bacteria	912
3300005591|Ga0070761_10266138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027
3300005602|Ga0070762_10652297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703
3300005764|Ga0066903_108397962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527
3300006797|Ga0066659_11119971	Not Available	658
3300006804|Ga0079221_10794157	Not Available	677
3300006903|Ga0075426_11033131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621
3300007982|Ga0102924_1079398	All Organisms → cellular organisms → Bacteria	1741
3300009012|Ga0066710_103716302	Not Available	574
3300009520|Ga0116214_1034332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1830
3300009525|Ga0116220_10118573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127
3300009545|Ga0105237_11281972	Not Available	739
3300009551|Ga0105238_12236353	Not Available	582
3300010049|Ga0123356_10738083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1154
3300010321|Ga0134067_10118259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921
3300010343|Ga0074044_10183643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392
3300010360|Ga0126372_12815352	Not Available	538
3300010376|Ga0126381_102480224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743
3300010379|Ga0136449_100797389	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1561
3300012089|Ga0153924_1049585	Not Available	820
3300012198|Ga0137364_10400338	All Organisms → cellular organisms → Bacteria	1027
3300012349|Ga0137387_10380966	Not Available	1022
3300012971|Ga0126369_13590867	Not Available	508
3300015373|Ga0132257_101041188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1031
3300016270|Ga0182036_10942543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709
3300016270|Ga0182036_10996294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690
3300016422|Ga0182039_11133209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705
3300017821|Ga0187812_1205926	Not Available	628
3300017926|Ga0187807_1038162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1487
3300017928|Ga0187806_1140498	Not Available	792
3300017932|Ga0187814_10390376	Not Available	541
3300017942|Ga0187808_10199142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890
3300017948|Ga0187847_10913420	Not Available	500
3300018001|Ga0187815_10316751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	662
3300018007|Ga0187805_10035970	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2213
3300018007|Ga0187805_10370968	Not Available	663
3300018012|Ga0187810_10065862	All Organisms → cellular organisms → Bacteria	1386
3300018034|Ga0187863_10125398	Not Available	1435
3300018042|Ga0187871_10476173	Not Available	691
3300018468|Ga0066662_11372785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	729
3300020582|Ga0210395_10241020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1358
3300020583|Ga0210401_10937714	All Organisms → cellular organisms → Bacteria	724
3300021180|Ga0210396_10364375	All Organisms → cellular organisms → Bacteria	1273
3300021403|Ga0210397_10337367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	1114
3300021405|Ga0210387_10514842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064
3300021405|Ga0210387_11272798	Not Available	636
3300021406|Ga0210386_11460599	Not Available	571
3300021406|Ga0210386_11576712	Not Available	545
3300021474|Ga0210390_11062084	Not Available	659
3300021479|Ga0210410_11243595	Not Available	636
3300021559|Ga0210409_10946502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	735
3300021559|Ga0210409_11716524	Not Available	504
3300021560|Ga0126371_13874104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504
3300024288|Ga0179589_10358837	Not Available	663
3300025910|Ga0207684_10775851	Not Available	811
3300025914|Ga0207671_11574003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506
3300025917|Ga0207660_10331581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217
3300025924|Ga0207694_11410014	Not Available	589
3300025927|Ga0207687_10315418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1264
3300025949|Ga0207667_11822330	Not Available	572
3300026078|Ga0207702_10824753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	917
3300026121|Ga0207683_10432492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212
3300026327|Ga0209266_1266993	Not Available	543
3300026552|Ga0209577_10147982	All Organisms → cellular organisms → Bacteria	1850
3300027725|Ga0209178_1090440	Not Available	1014
3300027855|Ga0209693_10400653	Not Available	663
3300027905|Ga0209415_10288889	All Organisms → cellular organisms → Bacteria	1428
3300028808|Ga0302228_10243725	Not Available	812
3300028879|Ga0302229_10527675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	520
3300029943|Ga0311340_11202683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610
3300029943|Ga0311340_11588718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	508
3300029999|Ga0311339_11590838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	577
3300030056|Ga0302181_10049528	All Organisms → cellular organisms → Bacteria	2220
3300030058|Ga0302179_10203152	Not Available	875
3300030058|Ga0302179_10524861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519
3300030490|Ga0302184_10416239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	520
3300030503|Ga0311370_11213286	All Organisms → cellular organisms → Bacteria → Proteobacteria	816
3300030580|Ga0311355_10160126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2407
3300030580|Ga0311355_11882591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Leisingera	505
3300030739|Ga0302311_10368823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1019
3300031640|Ga0318555_10033117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2531
3300031668|Ga0318542_10446918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670
3300031668|Ga0318542_10746546	Not Available	512
3300031680|Ga0318574_10051182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2174
3300031713|Ga0318496_10294858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	895
3300031747|Ga0318502_10290587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960
3300031751|Ga0318494_10565325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	664
3300031770|Ga0318521_10755284	Not Available	592
3300031771|Ga0318546_10961250	Not Available	601
3300031778|Ga0318498_10079489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1478
3300031794|Ga0318503_10285135	Not Available	536
3300031798|Ga0318523_10380006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	702
3300031805|Ga0318497_10432929	Not Available	736
3300031846|Ga0318512_10293786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	807
3300031859|Ga0318527_10105077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162
3300031860|Ga0318495_10264860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768
3300031860|Ga0318495_10310826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700
3300031912|Ga0306921_11900389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637
3300031941|Ga0310912_10610734	Not Available	848
3300031954|Ga0306926_12819928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524
3300031959|Ga0318530_10455543	Not Available	531
3300032008|Ga0318562_10777908	Not Available	548
3300032054|Ga0318570_10208011	Not Available	884
3300032063|Ga0318504_10616728	Not Available	521
3300032066|Ga0318514_10368670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	761
3300032076|Ga0306924_10075714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3764
3300032076|Ga0306924_11792878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	640
3300032160|Ga0311301_10615019	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1560
3300032261|Ga0306920_104380216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506
3300033134|Ga0335073_11480206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657
3300033828|Ga0334850_080501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.92%
Host-Associated	Host-Associated	10.08%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.99%
Aquatic	Environmental → Aquatic	10.92%
Plants	Host-Associated → Plants	8.40%
Arthropoda	Host-Associated → Arthropoda	0.84%
Fungi	Host-Associated → Fungi	0.84%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.23%
Peat	Environmental → Terrestrial → Peat	11.76%
Freshwater	Environmental → Aquatic → Freshwater	10.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.84%
Mycelium	Host-Associated → Fungi → Mycelium	0.84%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.08%
Loam	Environmental → Terrestrial → Soil → Loam	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.68%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.84%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.84%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.84%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.41%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.84%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.84%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental
3300029943	I_Palsa_N3 coassembly	Environmental
3300029999	I_Palsa_E3 coassembly	Environmental
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030580	II_Palsa_N1 coassembly	Environmental
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066810_100465441	3300005169	Soil	VLSGAVTRAQLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH*
Ga0066683_107222232	3300005172	Soil	GAVTSTQLEANLAALTVGQLSALRLAEPPDAYWAARAARPWH*
Ga0066690_101832222	3300005177	Soil	VHAGFAGVTRAQLEENLAALTVGQLPELSPAEAPDAYWAERAARPWH*
Ga0066688_109197842	3300005178	Soil	GAVTRAQLDQNLAALTVDQLPALSLAEAPDDYWAERAARPWH*
Ga0070709_117893931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTRAQLDENLAALTVGQVPPLSLAEAPGAYWAERAARPWH*
Ga0070714_1023569522	3300005435	Agricultural Soil	VTRAQLEENLAALTVGQLPELSLAEAPDAYWAERAARPWR*
Ga0070732_102509693	3300005542	Surface Soil	AVTRAQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH*
Ga0066699_104585811	3300005561	Soil	VHAGFAGVTRAQLEENLAALTVGQLPELSPAEAPDAYWAERAAR
Ga0070761_102661382	3300005591	Soil	VTRAQLDENLAALTVGQLPVLSLAESPDAYWTERAARPWH*
Ga0070762_106522971	3300005602	Soil	AQLDENLAALAVGELPPLSLAEAPDAYWAERAARPWH*
Ga0066903_1083979622	3300005764	Tropical Forest Soil	AQLGQNLAALTVGGLPELDLAESPGAYWAARSARPWQ*
Ga0066659_111199712	3300006797	Soil	VHAGFAGVTRAQLEENLAALTVGHIPELIPAEAPDAYWAERAARPWH*
Ga0079221_107941572	3300006804	Agricultural Soil	SGAVTRAQLAENLAALTVGPLPALSLAEAPDAYWAERAARPWH*
Ga0075426_110331311	3300006903	Populus Rhizosphere	GAVTRPQLEANLAALTVGELPVLSLAEAPGTYWAARAARPWR*
Ga0102924_10793983	3300007982	Iron-Sulfur Acid Spring	VVSGAVTRAQLDENLTALTVGQLPALSLAEADGAYWAQRAARPWH*
Ga0066710_1037163022	3300009012	Grasslands Soil	CAWEVVHAGFAGVTRAQLEENLAALTVGHIPELIPAEAPDAYWAERAARPWH
Ga0116214_10343323	3300009520	Peatlands Soil	DENLAALTVGQLPALSLAEAPDAYWAERAARPWH*
Ga0116220_101185733	3300009525	Peatlands Soil	GAVTRAQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH*
Ga0105237_112819721	3300009545	Corn Rhizosphere	DENLAALTVGQVPPLSLAEAPGAYWAERAARPWH*
Ga0105238_122363531	3300009551	Corn Rhizosphere	TRAQLDENLAALSVGQLPALGLAEAPGAYWAQRAARPWH*
Ga0123356_107380832	3300010049	Termite Gut	VLSGAVTRAQLGENLAALTVGELPALGLAEAPDAYWAQRAVRPWH*
Ga0134067_101182591	3300010321	Grasslands Soil	VTRAQLDQNLAALTVGQLPALSLAEAPDAYWAERAARPWH*
Ga0074044_101836431	3300010343	Bog Forest Soil	VVLSGAVTRAQLDENLAALSVGPLPALSLAEAPGAYWAQRAARPWH*
Ga0126372_128153521	3300010360	Tropical Forest Soil	QLDENLAALTVGQLPELSLAEAPGAYWAERSARPWH*
Ga0126381_1024802242	3300010376	Tropical Forest Soil	VTGAQLDENLAALAVGRLPALSLAEAPDAYWAERAARPWH*
Ga0136449_1007973894	3300010379	Peatlands Soil	TRAQLDENLAALTVGQLPALNLAEAPDAYWAQRAARPWH*
Ga0153924_10495851	3300012089	Attine Ant Fungus Gardens	RAQLAENLAALTVGQVLPLSLAEDPDAYWAERAARPWH*
Ga0137364_104003381	3300012198	Vadose Zone Soil	VHAGFAGVTRAQLEENLAALTVGHIPELIPAEAPDAYWAERAAR
Ga0137387_103809661	3300012349	Vadose Zone Soil	AQLDENLAALTVGQVPPLSLAEAPGAYWAERAARPWH*
Ga0126369_135908672	3300012971	Tropical Forest Soil	VLSGAVTRAQLDENLAALTVGQLPELSLAEAPGAYWAERSARPWH*
Ga0132257_1010411882	3300015373	Arabidopsis Rhizosphere	EENLAALTVGQLPELSPAEAPDAYWAERAARPWH*
Ga0182036_109425431	3300016270	Soil	VLSGAVTRAQLDENLAALTVGPLPALSLAEAPDAYWAQRAARPWH
Ga0182036_109962942	3300016270	Soil	LSGAVTRKQLDENLAALTVGQLPALGLTEAPDAYWAERAARPWH
Ga0182039_111332091	3300016422	Soil	LDQNLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0187812_12059262	3300017821	Freshwater Sediment	QLEQNLTALTVGPLPELSLAETPDTYWAERAARPWH
Ga0187807_10381624	3300017926	Freshwater Sediment	VTRAQLDENLAALTLSQLPSLRLAESPGSYWAERAARPWQ
Ga0187806_11404982	3300017928	Freshwater Sediment	VTRVQLDENLAALTVGEIPALSLAEAPDAYWAERAARPWR
Ga0187814_103903761	3300017932	Freshwater Sediment	QLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH
Ga0187808_101991422	3300017942	Freshwater Sediment	SGAVTSTQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH
Ga0187847_109134201	3300017948	Peatland	LSGAVTRAQLDENLAALTVGQLPALSLAEDPGAYWAERTARPWH
Ga0187815_103167512	3300018001	Freshwater Sediment	SGAVTRAQLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0187805_100359703	3300018007	Freshwater Sediment	VLSGAVTRAQLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0187805_103709681	3300018007	Freshwater Sediment	VTRAQLDENLAALTVGQLPALSLAEAPDAYWAQRAARPWH
Ga0187810_100658623	3300018012	Freshwater Sediment	VLSGAVTPAQLEQKLTALTVGPLPELSLAETPDTYWAERAARPWH
Ga0187863_101253981	3300018034	Peatland	LDENLAALTVGQLPALSLAEDPGAYWAERTARPWH
Ga0187871_104761732	3300018042	Peatland	LDENLAALTVGQLPPLSLAEDPGAYWAQRAARPWH
Ga0066662_113727852	3300018468	Grasslands Soil	VTRAQLEENLAALTVGQLPELSLAEAPDAYWAERAARPWH
Ga0210395_102410203	3300020582	Soil	RAQLDENLAALTVGQLPALGLAEPPDAYWAERAARPWH
Ga0210401_109377141	3300020583	Soil	LDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0210396_103643751	3300021180	Soil	QLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0210397_103373673	3300021403	Soil	GQLQSNLAALAVTDLPPLDLAEPPGAYWAERAARPWQ
Ga0210387_105148421	3300021405	Soil	AQLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0210387_112727982	3300021405	Soil	LSGAVTRAQLDENLAALTVGQLPALDLAEAPNAYWAERAARPWH
Ga0210386_114605991	3300021406	Soil	SGAVTRGQLDENLAALTVGQLPALSLAEAPVAYWEERAARPWH
Ga0210386_115767121	3300021406	Soil	TRAQLDENLAALTVGQLPALSLAEAPGAYWAERAARPWH
Ga0210390_110620842	3300021474	Soil	VTRGQLDENLAALTVGQLPALSLAEAPVAYWEERAARPWH
Ga0210410_112435952	3300021479	Soil	AVTRAQLDENLAALTVGQLPALDLAEAPDAYWAERAARPWH
Ga0210409_109465022	3300021559	Soil	SGAVTRAQLDGNLAALTVGQLPPLSLAEAPDAYWAERAARPWH
Ga0210409_117165241	3300021559	Soil	QLDENLAALTVGPLPALSLAEAPGAYWAERAARPWH
Ga0126371_138741042	3300021560	Tropical Forest Soil	GAVTRAQLDQNLAALNAGQFPALSLAEIPDTYWAERAARPWH
Ga0179589_103588371	3300024288	Vadose Zone Soil	AQLDENLAALTVGQVPPLSLAEAPGAYWAERAARPWH
Ga0207684_100979391	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PRQLQSNLAALAVSDLHDLDIAEPPGSYWASRAARPWQ
Ga0207684_107758511	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AVTRAQLDENLAALTVGQVPPLGLAEAPGAYWAERAARPWH
Ga0207671_115740031	3300025914	Corn Rhizosphere	TRAQLDENLAALTVGQLPALSLAEAPGAYWAQRAARPWH
Ga0207660_103315811	3300025917	Corn Rhizosphere	SGAVTSTQLEANLAALRVGELPALRLAEPPDAYWAARAARPWH
Ga0207694_114100142	3300025924	Corn Rhizosphere	AVTRAQLDENLAALSVGQLPALGLAEAPGAYWAQRAARPWH
Ga0207687_103154181	3300025927	Miscanthus Rhizosphere	VVLSGAVTRALLDENLAALTVGQVPPLSLAEAPGAYWAERAARPWH
Ga0207667_118223301	3300025949	Corn Rhizosphere	AVTRAQLEENLAALTVGQLPELSPAEAPDAYWAERAARPWH
Ga0207702_108247531	3300026078	Corn Rhizosphere	RAQLEENLAALTVGQLPELSLAEAPDAYWAERAARPWH
Ga0207683_104324923	3300026121	Miscanthus Rhizosphere	TRSQLEANLAALTVGELPALRLAEPPDAYWAARAARPWH
Ga0209266_12669931	3300026327	Soil	VTSTQLEANLAALTVGQLSALRLAEPPDAYWAARAARPWH
Ga0209577_101479822	3300026552	Soil	VHAGFAGVTRAQLEENLAALTVGHIPELIPAEAPDAYWAERAARPWH
Ga0209178_10904401	3300027725	Agricultural Soil	LEGNLAALTVGQVPTLSLAEAPDAYWAERAARPWH
Ga0209693_104006531	3300027855	Soil	AQLDENLAALTVGQLPALSLAEAPGAYWAQRAARPWH
Ga0209415_102888891	3300027905	Peatlands Soil	VTRAQLDENLAALTVGQLPALSLAEPPDAYWAERAARPWH
Ga0302228_102437252	3300028808	Palsa	QLDENLAALTVGQLPELSLAEDPSAYWAERAARPWH
Ga0302229_105276752	3300028879	Palsa	LSGAVTRAQLDENLAALTVGQLPGLSLAEDPGAYWAERAARPWH
Ga0311340_112026832	3300029943	Palsa	LAENLTALTVGQLPALSLAEDPAAYWQERAARPWH
Ga0311340_115887181	3300029943	Palsa	RAQLDENLAALTVGQLPGLSLAEDPGAYWAERAARPWH
Ga0311339_115908381	3300029999	Palsa	SGAVTRAQLDENLAALTVGQLPGLSLAEDPGAYWAERAARPWH
Ga0302181_100495284	3300030056	Palsa	VTRAQLDENLAALTVGQLPGLSLAEDPGAYWAERAARPWH
Ga0302179_102031521	3300030058	Palsa	VTRAQLDENLAALTVGPLPELSLAEDPGAYWAERAARPWH
Ga0302179_105248611	3300030058	Palsa	AVTSGQLHANLAALAVGRLPRLDLAEPPDAYWRARSARPWR
Ga0302184_104162391	3300030490	Palsa	RAQLDENLAALTVGQLPELSLAEDPGAYWAERAARPWH
Ga0311370_112132862	3300030503	Palsa	SGAVTRAQLDENLAALTVGQLPELSLAEDPGAYWAERAARPWH
Ga0311355_101601261	3300030580	Palsa	GAVTRAQLDENLAALTVGQLPELSLAEDPSAYWAERAARPWH
Ga0311355_118825912	3300030580	Palsa	TRAQLDENLAALTVGQLPGLSLAEDPGAYWAERAARPWH
Ga0302311_103688233	3300030739	Palsa	TRAQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH
Ga0318555_100331171	3300031640	Soil	QQLDANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0318542_104469181	3300031668	Soil	RRQLGANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0318542_107465461	3300031668	Soil	VLSGAVTRAQLEENLAALTVGRLPALSLAEAPGAYWAQRAARPWR
Ga0318574_100511821	3300031680	Soil	RAQLEENLAALTVGRLPALSLAEAPGAYWAQRAARPWR
Ga0318496_102948581	3300031713	Soil	SMQLEANLAALRVGGLPALSLAESPDAYWAARAARPWH
Ga0318502_102905872	3300031747	Soil	AVTSRQLGANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0318494_105653251	3300031751	Soil	VTRRQLGANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0318521_107552841	3300031770	Soil	LNENLAALTVGPLPAPSLAEAPDAYWAGRAARPWH
Ga0318546_109612501	3300031771	Soil	VLSGAVTRAQLNENLAALTVGPLPALSLAEAPDAYWAGRAARPWH
Ga0318498_100794891	3300031778	Soil	VLSGAVTSMQLQANLAALTVGELPALRLAEPPDAYWAARAARPWH
Ga0318503_102851351	3300031794	Soil	TRTQLEENLAALTVGQLPELSLAEAPDAYWTERAARPWH
Ga0318523_103800061	3300031798	Soil	VTSTQLEANLAALTVGELPALRLAEPPDAYRAARAARPWH
Ga0318497_104329291	3300031805	Soil	SGAVTRTQLDENLAALTVGQLPALGLTEAPDAYWAERAARPWH
Ga0318512_102937862	3300031846	Soil	SGAVTRAQLDENLAALTVGQLPALSLAEAPDAYWAERAARPWH
Ga0318527_101050771	3300031859	Soil	RAQLEENLAALTVGQLPALSLAEAPDAYWAERAARPWH
Ga0318495_102648601	3300031860	Soil	VLSGAVTRAQLDENLAALTVGPLPALSLAEAPDAYWVERAARPWH
Ga0318495_103108261	3300031860	Soil	VVLSGAVTRTQLEENLAALTVGQLPELSLAEAPDAYWTERAARPWH
Ga0306921_119003892	3300031912	Soil	SGAVTRAQLGENLAALAVGPLPALSLAEAPGAYWAERAGRPWH
Ga0310912_106107342	3300031941	Soil	LEENLAALTVGRLPALSLAEAPGAYWAQRAARPWR
Ga0306926_128199281	3300031954	Soil	QLDENLAALTVGPLPALSLAEAPDAYWAQRAARPWH
Ga0318530_104555431	3300031959	Soil	RTQLDENLAALTVGQLPALGLTEAPDAYWAERAARPWH
Ga0318562_107779082	3300032008	Soil	VTRAQLGENLAALAVGPLPALSLAEAPGAYWSERAGRPWH
Ga0318570_102080111	3300032054	Soil	VTRTQLDENLAALTVGQLPALGLTEAPDAYWAERAARPWH
Ga0318504_106167281	3300032063	Soil	RKQLDENLAALTVGQLPALGLTEAPDAYWAERAARPWH
Ga0318514_103686702	3300032066	Soil	GSPRRQLGANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0306924_100757141	3300032076	Soil	RQQLDANLAALTVGELPGLDLAESPAGYWAARSARPWR
Ga0306924_117928781	3300032076	Soil	RAQLEENLAALTVGELPALSLAEAPVAYWAERAARPWH
Ga0311301_106150194	3300032160	Peatlands Soil	TRAQLDENLAALTVGQLPALNLAEAPDAYWAQRAARPWH
Ga0306920_1043802161	3300032261	Soil	VTRAQLDENLAALGVGQLPALSLAEAPDAYWAERAARPWH
Ga0335073_114802061	3300033134	Soil	VTRPELDENLAALTVGQPPALNLAEAPDAYWAERAARPWH
Ga0334850_080501_3_119	3300033828	Soil	SRQLHANLAALAVGELPRLDLAEPPAAYWQARSARPWR