Metagenome / Metatranscriptome Family F074604

Basic Information
Family ID	F074604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	51 residues
Representative Sequence	IPRVDPAAVDTVLEMVGAKGAAKTKLFDNSIVDRLVQEGFIDKLYKGAKP
Number of Associated Samples	108
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.68 %
% of genes from short scaffolds (< 2000 bps)	1.68 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (98.319 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.605 % of family members)
Environment Ontology (ENVO)	Unclassified (34.454 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.18% β-sheet: 0.00% Coil/Unstructured: 62.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF03070	TENA_THI-4	33.61
PF14518	Haem_oxygenas_2	31.93
PF09084	NMT1	2.52
PF13343	SBP_bac_6	1.68
PF02803	Thiolase_C	0.84
PF00140	Sigma70_r1_2	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.52
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.52
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.84
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.84

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.32 %
All Organisms	root	All Organisms	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.32 %
cellular organisms	root	All Organisms → cellular organisms	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.68 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101627216	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006880\|Ga0075429_100182566	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.91%
Host-Associated	Host-Associated	31.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.58%
Plants	Host-Associated → Plants	31.09%
Aquatic	Environmental → Aquatic	19.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.53%
Sediment	Environmental → Aquatic → Sediment	13.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.56%
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Marine	Environmental → Aquatic → Marine	2.52%
Floodplain	Environmental → Terrestrial → Floodplain	1.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.84%
Peat	Environmental → Terrestrial → Peat	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.45%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Sand	Environmental → Terrestrial → Soil → Sand	0.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.04%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.52%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.84%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07379673	2228664021	Soil	TVLEMVGSKGAPRAKLFDNSIVDRLAHEGFIDKLYKGVKP
ARcpr5oldR_0156991	3300000041	Arabidopsis Rhizosphere	EMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP*
AP72_2010_repI_A01DRAFT_10277362	3300000579	Forest Soil	KYLDNVPRVDPAAVDTVLEMVGQSGPSKTKLFDNSIVDRLVQQGFIEKLYKGGKS*
JGI1027J12803_1016272162	3300000955	Soil	ELHYEFVTKYLDAVPRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVERLVQQGLIDKLYKGGKS*
Ga0055468_101340661	3300003993	Natural And Restored Wetlands	RVDPAAVDTVLEMVGQPGPVKVKIFDNSIVDRFVQQGMIDKLYKGGKP*
Ga0055465_102410512	3300004013	Natural And Restored Wetlands	KYLDSVPRVDPAAVDTVLEMVGQSGPVKVKIFDNSIVDRFVQQGMIDKLYKGGKP*
Ga0063356_1003257561	3300004463	Arabidopsis Thaliana Rhizosphere	PRVDPAAIDTVLEMVGQSAPSKTKIFDNSIVDRLVQQGLIDKLYKGGKP*
Ga0063356_1043406361	3300004463	Arabidopsis Thaliana Rhizosphere	AVPRVEPAAVDTVLEMVGAKEAAKTKLYDNSVVDRLVQEGLIDRLYKGAKL*
Ga0066677_100725693	3300005171	Soil	DPAAVQTVLEMVGSGGAAKAKLFDNSIVDHLVQDGIIDKLYKGGNRERG*
Ga0065715_108948292	3300005293	Miscanthus Rhizosphere	MRYLDSVPRIEPAAVDTVLEMVGAKGAPKTKLYDNAIVDRLVHEGFTDKLYKGAKS*
Ga0068869_1000598894	3300005334	Miscanthus Rhizosphere	RIDPAAVETVLEMVGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS*
Ga0070711_1014320761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PRIDPAAVDTVLEMVGAKGAPKGRLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0070662_1012857641	3300005457	Corn Rhizosphere	DPVAIETVLEMVGQKGAPKVQLFDNAIVDRLTQEGFIDRLYKGGKS*
Ga0070681_104146223	3300005458	Corn Rhizosphere	FVMRYLDSVPRIEPAAVDTVLEMVGAKGAPKTKLYDNSIVDRLVHEGFTDRLYKGAK*
Ga0073909_103759751	3300005526	Surface Soil	IDPAAIETVLEMVGAKNAAKAKLYDNSIIDRLIHEGFIDKLYKGAKP*
Ga0070672_1018589911	3300005543	Miscanthus Rhizosphere	DSVPRIDPAAVETVLEMVGAKGAAKTKLYDNSIIDRLVHEGFTDKLYKGAKP*
Ga0066701_100107851	3300005552	Soil	PRVDPTAVQTVLEIVGSDKAAKAKLFDNSIVDHLVQDGIIDKLYKGGNRERG*
Ga0066704_106292173	3300005557	Soil	PAAVDTVLEMVGQSVATKAKLFDNSIVDRLVQQGLVDRLYKGAKSS*
Ga0066708_105251921	3300005576	Soil	AAVDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0068857_1021102642	3300005577	Corn Rhizosphere	HYEFVMKYLEAVPRVEPAAVDTVLEMVGAKEAAKTKLYDNSVVDRLVQEGLIDRLYKGAKL*
Ga0066903_1003977854	3300005764	Tropical Forest Soil	YLDSVPRIEPAAVDTVLEMVGAKGPVKTKLYDNSIIDRLVHEGFTDKLYRGAKS*
Ga0074473_101764452	3300005830	Sediment (Intertidal)	DATPRVDPAAVDTVLEMVGSKGAVKTALFDNSTVDRLAREGFIDRLYKGAKP*
Ga0075288_10455821	3300005874	Rice Paddy Soil	LDSIPRVDPAAVETVLEMVGSKGVLKAKLFDNSIVDRLVREGLIDKLYKGPKP*
Ga0075286_10553091	3300005886	Rice Paddy Soil	DAVPRVDPAAVDTVLEMVGSKGAPKAKLFDNSIVDRLVHEGFIEKLYKGAKP*
Ga0075289_10962552	3300005888	Rice Paddy Soil	MHREFVNKYLDSIPRVDPAAVETVLEMVGSKGVLKAKLFDNSIVDRLVREGLIDKLYKGPKP*
Ga0066659_114281301	3300006797	Soil	GSKAAPKTRLFDNSIIDRLSQEGFIDKLYKGAKP*
Ga0075428_1018398391	3300006844	Populus Rhizosphere	EFVMRYLDSVPRIDPAAVETVLEMVGTKGAPKSKLYDNSIIDRLVHEGFTERLYKGAKP*
Ga0075430_1001394111	3300006846	Populus Rhizosphere	IETVLEMVGQKSSPKVQLFDNAIVDRLAQEGFIDRLYKGGKS*
Ga0075430_1008921352	3300006846	Populus Rhizosphere	DPAAIETVLEMVGQKSSPKVQLFDNAIVDRLAQEGFIDRLYKGGKS*
Ga0075430_1010511992	3300006846	Populus Rhizosphere	VPRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVERLVQQGLIDKLYKGGKS*
Ga0075431_1021074842	3300006847	Populus Rhizosphere	VLEMVGQKSSPKVQLFDNAIVDRLAQEGFIDRLYKGGKS*
Ga0075431_1021255142	3300006847	Populus Rhizosphere	RYLDSIPRVDAAAVATVLEMVGAKGTAKTKLFDNSIIDRLAQEGFIDKLYKGAKP*
Ga0075433_117616312	3300006852	Populus Rhizosphere	AAVDTVLEMVGAKGAAKAKLFDNAIVDRMAQEGFIDKLYKGAKP*
Ga0075429_1001825661	3300006880	Populus Rhizosphere	ELHYEFVTKYLDAVPRVDPAAIDTVLEMVGQSGPDKTKLFDNTIVERLVQQGLIDKLYKGGKL*
Ga0075429_1004572603	3300006880	Populus Rhizosphere	RVDPAAVDTVLEMVGAKGAAKAKLFDNSIVDRLRQEGFIDKLYKGAKP*
Ga0075426_108516842	3300006903	Populus Rhizosphere	VPRIDPAAVETVLEMVGAKGAPKNKLYDNSIIDRLVHEGFTERLYKGAKS*
Ga0079303_101926721	3300006930	Deep Subsurface	VDTVLEMVGSKEAAKTKLYDNSVVDRLVQEGLVERLYKGAKS*
Ga0075419_100807974	3300006969	Populus Rhizosphere	TKYLDAVPRVDPAAIDTVLEMVGQSGPDKTKLFDNTIVERLVQQGLIDKLYKGGKL*
Ga0079218_109278421	3300007004	Agricultural Soil	ETVLEMVGQKSSPKVQLFDNAIVDRLVQEGFIDRLYKGGKS*
Ga0105240_108644061	3300009093	Corn Rhizosphere	EMVGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS*
Ga0066709_1038965211	3300009137	Grasslands Soil	KYLDVIPRVEPAAVDTVLEMVGQTGTSKVKLYDTSIVDRLVQQGLIDKLYKGGKS*
Ga0114129_110894901	3300009147	Populus Rhizosphere	HHDFVMRYLDSVPRIDPAAVDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0114129_116761452	3300009147	Populus Rhizosphere	TKYLDAVPRVDPAAIDTVLEMVGQSGPDKTKLFDNTIVERLVQQGLIDRLYKGGKS*
Ga0105092_101884882	3300009157	Freshwater Sediment	MHYEFVTKYLDSVPRVDPAAVDTVLEMVGSSGATKVKLFDNSIVDRLVQQGFIDKLYKGGKS*
Ga0105092_104476312	3300009157	Freshwater Sediment	ELHYEFVSKYLDAVPRVDPAAVDTVLEMVGSKGAPKAKLFDNSIVDRLVQDGFIDKLYKGAKP*
Ga0075423_113091392	3300009162	Populus Rhizosphere	VLEMVGAKGAAKAKLFDNAIVDRMAQEGFIDKLYKGAKP*
Ga0075423_121266152	3300009162	Populus Rhizosphere	IDAAAVDTVLEMVGAKGAPKNKLYDNSIIDRLVHDGFTDKLYKGAKS*
Ga0105248_126697132	3300009177	Switchgrass Rhizosphere	EPAAVDTVLEMVGQKGSAKVPLFDNSIVDRLVQQGFIEKLYKGSKG*
Ga0105347_13638141	3300009609	Soil	HYEFVTKYLDATPRVDPAAVDTVLEMVGSKGAAKVKLFDNTIVDRLARDGFIDKLYQGVKP*
Ga0114944_12294421	3300009691	Thermal Springs	YLDAIPRVEPAAVETVLQMVGHSGPLKAKIYDNSIIDRLIQEGFIDKLYPDPKKR*
Ga0105084_10205853	3300009811	Groundwater Sand	SIPRVDPAAVDTVFEMVWSAGAAKAKLFDNSIVDRFVQDGFIDKLYKGGKS*
Ga0127503_105711963	3300010154	Soil	DPAAIDTVLEMVGQSGSDKTKLFDNSIVERLVQQGLIEKLYKGGKS*
Ga0134062_103576251	3300010337	Grasslands Soil	DSVPRVDPAAVQTVLEMVGSGGAAKAKLFDNSIVDHLVQDGIIDKLYKGGNRERG*
Ga0126377_129869622	3300010362	Tropical Forest Soil	VGAKGAPKPKLYDNSIIDRLVHQGFTDKLYKGAKP*
Ga0134127_100732344	3300010399	Terrestrial Soil	DSVPRIDPAAVDTVLEMVGSKGTPKTKLFDNSIVDRLVQEGFIDKLYKGAKP*
Ga0137392_114858081	3300011269	Vadose Zone Soil	LDAVPRVDPAAVDTVLEMVGQSGPGKTKLFDNSIVDRLVQQGLIDKLYKGGKS*
Ga0137340_11107971	3300011405	Soil	RVDPAAVDTVLDMVGAKGAAKAKLFDNSMVDRLVQEGFIDKLYKGAKP*
Ga0137463_12354422	3300011444	Soil	MVGAKDYSKAKLIDNSIVERLVQEGLIDKLYKGAKP*
Ga0137322_10348472	3300012146	Soil	PRVDPAAVDTVLEMVGAKGAAKAKLYDNSIVDRLAQEGFIDKLYKGAKP*
Ga0137382_103166613	3300012200	Vadose Zone Soil	VMRYLDSVPRIDPAAVDTVLEMVGAKGAPKDKLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0137382_103350691	3300012200	Vadose Zone Soil	PAAVDTVLEMVGAKGAPKDKLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0137363_114806401	3300012202	Vadose Zone Soil	MRYLDSVPRIDPAAVDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP*
Ga0137381_117172081	3300012207	Vadose Zone Soil	EFVSKYLDSVPRVDPAAVDTIMEMVGSKGAPKTKLFDNSIIDRLSQEGFIDKLYKGAKP*
Ga0137379_115457502	3300012209	Vadose Zone Soil	PAAVDTVLEMVGAKGAPKDRLYDNTIIDRLVHEGFTDKFYKGAKP*
Ga0157324_10498972	3300012506	Arabidopsis Rhizosphere	HHEFVMKYLDSVPRIDTAAVDTVLEMVGAKGAPKSKLYDNSIIDRLVHEGFTDKLYKGAKS*
Ga0157327_10899561	3300012512	Arabidopsis Rhizosphere	TVLEMVGAKGAPKSKLYDNSIIDRLVHEGFTERLYKGAKS*
Ga0137396_110743772	3300012918	Vadose Zone Soil	TVLEMVGAKGTPKDRLYDNTIIDRLVHEGFTDKLYKGAKP*
Ga0137394_108252551	3300012922	Vadose Zone Soil	FVTKFLDAVPRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVERLVQQGLIDKLYKGGKS*
Ga0126375_112454331	3300012948	Tropical Forest Soil	PRVDPAAVDTVLEMVGQSGPSKTKLFDNSIVDRFVQQGFIDRLYKGGKL*
Ga0164298_102103951	3300012955	Soil	EFVMRYLDAVPRIDPAAVETVLEMVGAKGAPKSKLYDNSIIDRLVHEGFTERLYKGAKS*
Ga0164303_114258271	3300012957	Soil	GSKGASKNSLYDNAIVDRLAREGFIDRLYKGAKS*
Ga0164309_107500921	3300012984	Soil	DATPRVDPAAVDTVLEMVGSKGASKNSLYDNAIVDRLAREGFIDRLYKGAKS*
Ga0164307_104957461	3300012987	Soil	PRIDPAAVETVLEMVGAKGAPKSKLYDNSIIDRLVHEGFTERLYKGAKS*
Ga0157372_121316162	3300013307	Corn Rhizosphere	VDTVLEMVGQKAPAKVPLFDNSIVDRLVQQGFIEKLYKGSKG*
Ga0075350_10082303	3300014315	Natural And Restored Wetlands	RVDPAAVDTVLEMVGSKEAAKTKLYDNSVVDRLVQEGLVDRLYRGTKS*
Ga0180089_10636481	3300015254	Soil	AAVDTILEMVGSQGAAKEKLFDNRIVDRLVQEGFIDKLYRGGK*
Ga0180093_10657522	3300015258	Soil	EFVGRYLDSIPRVDPAAVDTVLEMVGSKGAAKVKLFDNTIVDRLARDGFIDKLYQGVKP*
Ga0132256_1025811741	3300015372	Arabidopsis Rhizosphere	PRIDPAAVETVLEMVGAKGAPKSKLYDNSIIDRLVHEGFTERLYKGAKP*
Ga0184608_101341983	3300018028	Groundwater Sediment	KYLDAVPRVDPAAVDTVLEMVGSKGASKTKLFDNSIVDRLVQEGFIDKLYKGTKP
Ga0184634_101456801	3300018031	Groundwater Sediment	RYLDSIPRVDPAAVDTVLEMVGAKGAAKAKLFDNSIIDRLAQEGFIDKLYKGAKL
Ga0184634_103423742	3300018031	Groundwater Sediment	AVDTVLEMVGAAGATKAKLFDNSIIDRLVQEGFIDKLYK
Ga0184638_11376201	3300018052	Groundwater Sediment	KYLDAVPRVDPAAIDTVLEMVGQPGPSKTKIFDNSIVDRLVQQGFIDKLYKGGKS
Ga0184615_100403121	3300018059	Groundwater Sediment	STPRVDPAAVDTILEMVGSQGAAKEKLFDNRIVDRLVQEGFIDKLFRGGK
Ga0184635_102250011	3300018072	Groundwater Sediment	EFVTKYLDAVPRVDPAAIETVLEMVGQSGPDKTKLFDNSIVERLVQQGLIEKLYKGGKS
Ga0184632_103188381	3300018075	Groundwater Sediment	YEFVTKYLDNVPRVDPAAVDTVLEMVGQSGPSKTKIFDNSIVDRLVQQGFIDKLYKGGKS
Ga0184633_102350182	3300018077	Groundwater Sediment	MKYLDAVPKVEPAAIDTILEMVGHSGPARTKLFDNSIIDRLNQEGFID
Ga0184629_102686522	3300018084	Groundwater Sediment	VPRVDPAAIDTVLEMVGSKDAAKTKLYDNSVVDRLVQEGLIDRLYKGAKP
Ga0190271_129220142	3300018481	Soil	EMVGQKGAPKVQLFDNTIVDRLAQEGFIDRLYRGGKS
Ga0193713_10976291	3300019882	Soil	RIDPAAVDTVLEMVGAKGAPKDRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0193743_10782123	3300019889	Soil	DTRNVVEVFVTKYLDNVPRVDPAAVDTVLEMVGQSGPSKIKIFDNSIVDRLVQQGLIDKLYKGGKS
Ga0193753_102940151	3300020034	Soil	DSVPRIDPAAVETVLEMVGAKGAAKTKLYDNSIIDRLVHEGFTDKLYKGAKP
Ga0193719_104488862	3300021344	Soil	LAAVDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0209640_105212401	3300025324	Soil	IPRVDPAAVDTVLEMVGAKGAAKTKLFDNSIVDRLVQEGFIDKLYKGAKP
Ga0210076_11424722	3300025567	Natural And Restored Wetlands	DPAAIETVLEMVGQKSPPKVQLFDNAIVDRLAQQGFIDRLYKGGKS
Ga0207680_105121601	3300025903	Switchgrass Rhizosphere	LDSVPRIDPAAVETVLEMVGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS
Ga0207671_114329352	3300025914	Corn Rhizosphere	VGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS
Ga0207652_109700361	3300025921	Corn Rhizosphere	EFVMKYLDSVPRIDPAAVETVLEMVGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS
Ga0207659_107659781	3300025926	Miscanthus Rhizosphere	ETVLEMVGAKGAAKTKLYDNSIIDRLVHEGFTDKLYKGAKP
Ga0207709_104443452	3300025935	Miscanthus Rhizosphere	MRYLDSVPRIDPAAVDTVLEMVGAKGAPKDKLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0207709_114065572	3300025935	Miscanthus Rhizosphere	YEFVMKYLDSVPRIDPAAVETVLEMVGVKGAPKNKLYDNSIIDRLVHEGFTEKLYKGAKS
Ga0207670_107203192	3300025936	Switchgrass Rhizosphere	EFVMKYLDATPRVDPAAVDTVLEMVGSKGASKNSLYDNAIVDRLAREGFIDRLYKGAKS
Ga0207665_110016042	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0207668_107304842	3300025972	Switchgrass Rhizosphere	DTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0209474_100607336	3300026550	Soil	PAAVQTVLEMVGSGGAAKAKLFDNSIVNHLVQDGIIDKLYKGGNRERG
Ga0179587_105324971	3300026557	Vadose Zone Soil	FVMRYLDSVPRIDPAAVDTVLEMVGAKGAPRDRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0209970_10767602	3300027614	Arabidopsis Thaliana Rhizosphere	EFVSKYLDAVPRVDPAAVDTVLEMVGSKGAPKAKLFDNSIVDRLVHEGFIEKLYKGAKP
Ga0209485_13285801	3300027691	Agricultural Soil	IPRVDPAAIETVLEMVGQKGAPKVQLFDNTIVDRLAQEGFIDRLYRGGKS
Ga0307500_102621432	3300031198	Soil	IDPAAVDTVLEMVGAKGAPKGRLYDNTIIDRLIHEGFTDKLYKGAKP
Ga0307497_105707771	3300031226	Soil	LEAVPRVEPAAVDTVLEMVGSKDAVKTKLYDNSVVDRLVQEGLVDRLYKGTKS
Ga0310813_112520631	3300031716	Soil	HYQFVMRYLDSVPRIEPAAVDTVLEMVGAKGAPKTKLYDNAIVDRLVHEGFTDKLYKGAK
Ga0307469_113484881	3300031720	Hardwood Forest Soil	VPRVDPAAVDTVLEMVGSKAAPKTRLFDNSIVDRLSQEGFIDKLYKGAKP
Ga0307468_1007221351	3300031740	Hardwood Forest Soil	DPAAIDTVLEMVGQSGPDKTKLFDNSIVERLVQQGLIDKLYKGGKS
Ga0306925_117183001	3300031890	Soil	PRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVDRLVQQGLIDKLYKGGKS
Ga0306922_117101291	3300032001	Soil	VPRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVDRLVQQGLIDRLYKGGKS
Ga0307472_1027575242	3300032205	Hardwood Forest Soil	VTKYLDTVPRVDPAAIDTVLEMVGQSGPDKAKLFDNSIVDRLVQQGLIDKLYKGGKS
Ga0326726_113105901	3300033433	Peat Soil	VTMYLDAVPRVDPAAIDTVLEMVGQSEPDKTKLFDNSIVERLVQQGLIEKLYKGGKS
Ga0364925_0015589_2163_2351	3300034147	Sediment	MHYEFVTKYLDAVPRVDPAAVDTVLEMVGQSGPAKIKLFDNSIVDRLVQQGMIEKLYKGGKS
Ga0364935_0135541_582_752	3300034151	Sediment	MKYLEAVPRVEPAAIDTVLEMVGSKDAAKTKLYDNSVVDRLVQEGLIDRLYKGAKP
Ga0373950_0113960_403_591	3300034818	Rhizosphere Soil	LHYEFVTKYLDNVPRVDPAAIDTVLEMVGQSGPDKTKLFDNSIVDRLVQQGLIDKLYKGDKS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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