Metagenome / Metatranscriptome Family F074569

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	50 residues
Representative Sequence	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK
Number of Associated Samples	68
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	84.03 %
% of genes near scaffold ends (potentially truncated)	12.61 %
% of genes from short scaffolds (< 2000 bps)	68.91 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (31.933 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (44.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.866 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.87% β-sheet: 0.00% Coil/Unstructured: 55.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.29.2.0: automated matches	d6haza_	6haz	0.75469
a.29.2.0: automated matches	d6bqaa_	6bqa	0.74677
a.29.2.0: automated matches	d5mwza_	5mwz	0.74359
a.29.2.0: automated matches	d6znva1	6znv	0.71059
a.29.2.1: Bromodomain	d1eqfa1	1eqf	0.70576

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04434	SWIM	5.04
PF01541	GIY-YIG	4.20
PF14090	HTH_39	3.36
PF00149	Metallophos	3.36
PF02617	ClpS	1.68
PF00924	MS_channel	0.84
PF00782	DSPc	0.84
PF07963	N_methyl	0.84
PF05292	MCD	0.84
PF00881	Nitroreductase	0.84
PF00462	Glutaredoxin	0.84
PF11246	Phage_gp53	0.84
PF08406	CbbQ_C	0.84
PF13517	FG-GAP_3	0.84
PF02634	FdhD-NarQ	0.84
PF02086	MethyltransfD12	0.84
PF01909	NTP_transf_2	0.84
PF09722	Xre_MbcA_ParS_C	0.84
PF07486	Hydrolase_2	0.84
PF00011	HSP20	0.84
PF07460	NUMOD3	0.84
PF07733	DNA_pol3_alpha	0.84
PF00156	Pribosyltran	0.84
PF00534	Glycos_transf_1	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	5.04
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	5.04
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	5.04
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.84
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.84
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0714	MoxR-like ATPase	General function prediction only [R]	0.84
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.84
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.84
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.84
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.84
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	57.14 %
cellular organisms	root	All Organisms → cellular organisms	25.21 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.53 %
Unclassified	root	N/A	17.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.69 %
Unclassified	root	N/A	17.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.84 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	22.69 %
Unclassified	root	N/A	17.65 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.84 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	22.69 %
Unclassified	root	N/A	17.65 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	0.84 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Streptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae	22.69 %
Unclassified	root	N/A	17.65 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.84 %
Ktedonosporobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Streptococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	22.69 %
Unclassified	root	N/A	17.65 %
Ktedonosporobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter	0.84 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.84 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.37 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	22.69 %
Unclassified	root	N/A	17.65 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	0.84 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10013415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2710	Open in IMG/M
3300002856\|draft_11389412	Not Available	851	Open in IMG/M
3300002856\|draft_11399337	Not Available	891	Open in IMG/M
3300003277\|JGI25908J49247_10019116	All Organisms → Viruses → Predicted Viral	2054	Open in IMG/M
3300003393\|JGI25909J50240_1024435	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300003393\|JGI25909J50240_1072222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	696	Open in IMG/M
3300003394\|JGI25907J50239_1116906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	518	Open in IMG/M
3300004095\|Ga0007829_10137830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	514	Open in IMG/M
3300004770\|Ga0007804_1020962	All Organisms → Viruses → Predicted Viral	1817	Open in IMG/M
3300005525\|Ga0068877_10646150	Not Available	571	Open in IMG/M
3300005662\|Ga0078894_10762140	All Organisms → Viruses	850	Open in IMG/M
3300006037\|Ga0075465_10000030	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	27090	Open in IMG/M
3300006037\|Ga0075465_10000235	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9342	Open in IMG/M
3300006037\|Ga0075465_10024247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	1209	Open in IMG/M
3300006037\|Ga0075465_10062268	Not Available	799	Open in IMG/M
3300006037\|Ga0075465_10077757	Not Available	721	Open in IMG/M
3300006037\|Ga0075465_10097374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	650	Open in IMG/M
3300006119\|Ga0007866_1104293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	520	Open in IMG/M
3300006803\|Ga0075467_10193778	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300006805\|Ga0075464_10068855	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1990	Open in IMG/M
3300006805\|Ga0075464_10088516	All Organisms → Viruses → Predicted Viral	1766	Open in IMG/M
3300006805\|Ga0075464_10197055	All Organisms → Viruses → Predicted Viral	1195	Open in IMG/M
3300006805\|Ga0075464_10382751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	853	Open in IMG/M
3300006805\|Ga0075464_10607493	Not Available	673	Open in IMG/M
3300006805\|Ga0075464_10661562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	645	Open in IMG/M
3300006805\|Ga0075464_10680959	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	635	Open in IMG/M
3300006805\|Ga0075464_11095772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	502	Open in IMG/M
3300007538\|Ga0099851_1224053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	679	Open in IMG/M
3300008055\|Ga0108970_10401038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1137	Open in IMG/M
3300008107\|Ga0114340_1147144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	874	Open in IMG/M
3300008267\|Ga0114364_1047799	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1554	Open in IMG/M
3300008267\|Ga0114364_1103541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	881	Open in IMG/M
3300008267\|Ga0114364_1139476	Not Available	688	Open in IMG/M
3300009151\|Ga0114962_10006955	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8646	Open in IMG/M
3300009151\|Ga0114962_10268941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	964	Open in IMG/M
3300009154\|Ga0114963_10092481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1857	Open in IMG/M
3300009154\|Ga0114963_10302409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	890	Open in IMG/M
3300009154\|Ga0114963_10596138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	579	Open in IMG/M
3300009155\|Ga0114968_10252606	All Organisms → Viruses → Predicted Viral	1001	Open in IMG/M
3300009158\|Ga0114977_10000149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	44811	Open in IMG/M
3300009158\|Ga0114977_10059841	All Organisms → Viruses → Predicted Viral	2346	Open in IMG/M
3300009158\|Ga0114977_10077375	All Organisms → Viruses → Predicted Viral	2034	Open in IMG/M
3300009161\|Ga0114966_10004639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11800	Open in IMG/M
3300009161\|Ga0114966_10042671	All Organisms → Viruses → Predicted Viral	3263	Open in IMG/M
3300009169\|Ga0105097_10565899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	638	Open in IMG/M
3300009182\|Ga0114959_10053496	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2330	Open in IMG/M
3300009182\|Ga0114959_10299170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	804	Open in IMG/M
3300009185\|Ga0114971_10138520	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
3300009419\|Ga0114982_1014613	All Organisms → Viruses → Predicted Viral	2696	Open in IMG/M
3300009419\|Ga0114982_1033821	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1652	Open in IMG/M
3300009419\|Ga0114982_1159981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	695	Open in IMG/M
3300010885\|Ga0133913_10429494	All Organisms → Viruses → Predicted Viral	3489	Open in IMG/M
3300010885\|Ga0133913_12373631	All Organisms → Viruses → Predicted Viral	1299	Open in IMG/M
3300011009\|Ga0129318_10242311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	592	Open in IMG/M
3300012346\|Ga0157141_1004681	All Organisms → Viruses → Predicted Viral	2259	Open in IMG/M
3300012352\|Ga0157138_1010522	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300012352\|Ga0157138_1043643	Not Available	708	Open in IMG/M
3300012352\|Ga0157138_1081863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	507	Open in IMG/M
3300012664\|Ga0157497_1001073	Not Available	5188	Open in IMG/M
3300012667\|Ga0157208_10000101	Not Available	29562	Open in IMG/M
3300012667\|Ga0157208_10001107	Not Available	6428	Open in IMG/M
3300014810\|Ga0119896_1006735	Not Available	1965	Open in IMG/M
3300016797\|Ga0182090_1733672	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018048\|Ga0181606_10606062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	562	Open in IMG/M
3300020048\|Ga0207193_1184635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1677	Open in IMG/M
3300020048\|Ga0207193_1419638	Not Available	891	Open in IMG/M
3300020141\|Ga0211732_1051628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	889	Open in IMG/M
3300020141\|Ga0211732_1270423	All Organisms → Viruses → Predicted Viral	1092	Open in IMG/M
3300020151\|Ga0211736_10181983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3049	Open in IMG/M
3300020162\|Ga0211735_10124070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	943	Open in IMG/M
3300020172\|Ga0211729_10552376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	898	Open in IMG/M
3300020205\|Ga0211731_11030224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	838	Open in IMG/M
3300021952\|Ga0213921_1046006	Not Available	653	Open in IMG/M
3300021956\|Ga0213922_1061183	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300021956\|Ga0213922_1066389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	771	Open in IMG/M
3300021963\|Ga0222712_10172936	All Organisms → Viruses → Predicted Viral	1437	Open in IMG/M
3300022072\|Ga0196889_1021708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1333	Open in IMG/M
3300022072\|Ga0196889_1030111	Not Available	1101	Open in IMG/M
3300022190\|Ga0181354_1055132	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1322	Open in IMG/M
3300022407\|Ga0181351_1280498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	501	Open in IMG/M
3300022591\|Ga0236341_1000164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	40453	Open in IMG/M
3300022591\|Ga0236341_1003017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8158	Open in IMG/M
3300022591\|Ga0236341_1116395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	569	Open in IMG/M
3300022591\|Ga0236341_1123370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	548	Open in IMG/M
3300023184\|Ga0214919_10030521	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5635	Open in IMG/M
3300023311\|Ga0256681_11753198	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300025451\|Ga0208426_1000005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73670	Open in IMG/M
3300025451\|Ga0208426_1000504	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6071	Open in IMG/M
3300025451\|Ga0208426_1004080	Not Available	2052	Open in IMG/M
3300025451\|Ga0208426_1009348	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1409	Open in IMG/M
3300025451\|Ga0208426_1039873	Not Available	721	Open in IMG/M
3300025466\|Ga0208497_1005067	All Organisms → Viruses → Predicted Viral	3963	Open in IMG/M
3300025652\|Ga0208134_1022792	All Organisms → Viruses → Predicted Viral	2317	Open in IMG/M
3300025896\|Ga0208916_10002004	Not Available	8531	Open in IMG/M
3300025896\|Ga0208916_10174413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	928	Open in IMG/M
3300025896\|Ga0208916_10532234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	511	Open in IMG/M
3300025896\|Ga0208916_10536732	Not Available	509	Open in IMG/M
3300027631\|Ga0208133_1050681	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300027708\|Ga0209188_1033876	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2412	Open in IMG/M
3300027708\|Ga0209188_1203932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	710	Open in IMG/M
3300027710\|Ga0209599_10035723	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300027710\|Ga0209599_10077812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	870	Open in IMG/M
3300027733\|Ga0209297_1000010	Not Available	230993	Open in IMG/M
3300027733\|Ga0209297_1004209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7576	Open in IMG/M
3300027734\|Ga0209087_1098310	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300027741\|Ga0209085_1053717	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1858	Open in IMG/M
3300027749\|Ga0209084_1004944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9202	Open in IMG/M
3300027764\|Ga0209134_10031044	All Organisms → Viruses → Predicted Viral	1729	Open in IMG/M
3300027764\|Ga0209134_10191231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	705	Open in IMG/M
3300027770\|Ga0209086_10000195	Not Available	53524	Open in IMG/M
3300027770\|Ga0209086_10056274	All Organisms → Viruses → Predicted Viral	2178	Open in IMG/M
3300027785\|Ga0209246_10048014	All Organisms → Viruses → Predicted Viral	1643	Open in IMG/M
3300027785\|Ga0209246_10143136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	940	Open in IMG/M
3300027785\|Ga0209246_10193815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	795	Open in IMG/M
3300027785\|Ga0209246_10373358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300027797\|Ga0209107_10001405	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13460	Open in IMG/M
3300027798\|Ga0209353_10014768	All Organisms → Viruses → Predicted Viral	3716	Open in IMG/M
3300027836\|Ga0209230_10007392	All Organisms → Viruses → Predicted Viral	4815	Open in IMG/M
3300028025\|Ga0247723_1002023	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11227	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.64%
Engineered	Engineered	2.52%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.60%
Terrestrial	Environmental → Terrestrial	5.04%
Biotransformation	Engineered → Biotransformation	1.68%
Plants	Host-Associated → Plants	0.84%
Wastewater	Engineered → Wastewater	0.84%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.87%
Marine	Environmental → Aquatic → Marine	27.73%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.04%
Microbial Solubilization Of Coal	Engineered → Biotransformation → Microbial Solubilization Of Coal	1.68%
Leaf	Host-Associated → Plants → Leaf	0.84%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.84%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	36.13%
Coastal	Environmental → Aquatic → Marine → Coastal	24.37%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.49%
Lotic	Environmental → Aquatic → Freshwater → Lotic	5.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.04%
Creek	Environmental → Aquatic → Freshwater → Creek	2.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.68%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.84%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	34.45%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.37%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	5.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.68%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.68%
Unclassified	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.84%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	23.53%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	21.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.24%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	5.88%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.20%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.36%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.36%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.52%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.68%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.68%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.68%
Hydrocarbon Resource Environments	Engineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.84%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.84%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.84%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.84%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.84%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.84%
Wastewater	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300002856	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Tailing Pond Surface TP_surface	Engineered	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012346	Freshwater microbial communities from Emily Creek, Ontario, Canada - S29	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012664	Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300014810	Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - WX_IW_meta	Engineered	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025451	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_100134152	3300002447	Freshwater And Sediment	MNEQIRQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
draft_113894122	3300002856	Hydrocarbon Resource Environments	MNELKEQLLDLAYKRQDDVFSSSEHQEFECLIYLIEDGAITSFEELAEYGVEQ*
draft_113993372	3300002856	Hydrocarbon Resource Environments	MNELKEQLLDLAYKRQDDVFGSSERQEFECLIYLIEDGAITSFEELAEYGVEQ*
JGI25908J49247_100191161	3300003277	Freshwater Lake	MKDLLNLLYAQRDEFSAREFDCLVALIEDGTISTFEELAAYGVEE*
JGI25909J50240_10244351	3300003393	Freshwater Lake	MKEQLLNLAYEKEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEL*
JGI25909J50240_10722222	3300003393	Freshwater Lake	MKEQLLNLAYEKEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEA*
JGI25907J50239_11169061	3300003394	Freshwater Lake	MKEQLLALAYEQQDEFGSSVGAEFDCLIALIEDGTIDTFEELARYGVEK*
Ga0007829_101378301	3300004095	Freshwater	LLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0007804_10209623	3300004770	Freshwater	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0068877_106461503	3300005525	Freshwater Lake	MKEQLLALAYKQEDEVFGSSERDEFNCLIELIEDGTIDTFEELSKYGVEE*
Ga0078894_107621403	3300005662	Freshwater Lake	RGRRMREQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVTQ*
Ga0075465_1000003038	3300006037	Aqueous	MNNSITEQLLALAYLKEDEVYDSSERDEFDCLIALIEDGTIDTFEELAKYGVEE*
Ga0075465_1000023518	3300006037	Aqueous	MKEQLLALAYEQQDEVYACSEHEDFAALIYLIEDGTIDTFEELAKYGVEK*
Ga0075465_100242474	3300006037	Aqueous	MNERIKEQLLALAYEQQDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0075465_100622684	3300006037	Aqueous	MKEQLLALAYEKQDEVYACSEHEDFEAIIYLIEAGVISTFEELAKYGFEK*
Ga0075465_100777572	3300006037	Aqueous	MKEQLLALAYEQQDEVYACSESEDFAALIYLIEDGTIDTFEELAKYGFEK*
Ga0075465_100973741	3300006037	Aqueous	MNERMKEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKY
Ga0007866_11042933	3300006119	Freshwater	AYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0075467_101937785	3300006803	Aqueous	MKNIITDQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK*
Ga0075464_100688553	3300006805	Aqueous	MKEQLLALAYEQQDEFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEE*
Ga0075464_100885162	3300006805	Aqueous	MKDLLNLLYTQRDEFSAREFDCLVVLIEDGTISSFEELAAYGVEE*
Ga0075464_101970552	3300006805	Aqueous	MKNIITEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK*
Ga0075464_103827512	3300006805	Aqueous	MDERMKEQLLALAYEQQDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0075464_106074932	3300006805	Aqueous	MKELLLALAYEQQDEVYKCSESEDFAALIYLIEDGTIDTFEELAKYGFEK*
Ga0075464_106615621	3300006805	Aqueous	MNERMKEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK*
Ga0075464_106809592	3300006805	Aqueous	MKQQLLALAYKQQDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE*
Ga0075464_110957722	3300006805	Aqueous	MNNSIKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTIDTFEELARYGVAR*
Ga0099851_12240531	3300007538	Aqueous	VDNMDERMKEQLLALAYEQQDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0108970_104010384	3300008055	Estuary	MKEQLLALAYKQEDEVFGSSERDEFDCLIALIENGTINTFEELAKYGVEE*
Ga0114340_11471444	3300008107	Freshwater, Plankton	MKEQLLALAYKKEDEVFGSSERDEFDCLIALIEDGTIDTFEELSKYGVEE*
Ga0114364_10477992	3300008267	Freshwater, Plankton	MNEQIRQLSCRRQLLALAYEQEDQVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKR*
Ga0114364_11035412	3300008267	Freshwater, Plankton	MNEQIRQLSCRRQLLALAYEQEDQVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKQ*
Ga0114364_11394762	3300008267	Freshwater, Plankton	MKEQLLALAYKQEDEVFGSSERDEFNCLIELIENGTIDTFEKLAKYGVEE*
Ga0114962_1000695514	3300009151	Freshwater Lake	MNIKEQLLALAYEQEDRVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKQ*
Ga0114962_102689413	3300009151	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERAEFDCLIALIEDGTINTFEELARYGVERSGE*
Ga0114963_100924814	3300009154	Freshwater Lake	MNIKEQLLALAYEQEDQVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKQ*
Ga0114963_103024093	3300009154	Freshwater Lake	MKEQLLALAYAKEDEVFGSSERDEFDCLIALIEDGDIKTFEELARYGVEE*
Ga0114963_105961382	3300009154	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELARYGIEK*
Ga0114968_102526062	3300009155	Freshwater Lake	MNERIKEQLLALAYAKEDEVFGSSERDEFDCLIALIEDGDIKTFEELATYGVEE*
Ga0114977_1000014933	3300009158	Freshwater Lake	MKEQLLALAYEQEDEFGSSDRDEFDCLIALIEDGTINTFEELAKYGVEK*
Ga0114977_100598414	3300009158	Freshwater Lake	LREQLLKLAYEKQDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEK*
Ga0114977_100773755	3300009158	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELARYGVEK*
Ga0114966_1000463915	3300009161	Freshwater Lake	MKEQLLALAYEQEDDVFGSSERDEFDCLIALIEDGTINTFEELARYGVERSGE*
Ga0114966_100426715	3300009161	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE*
Ga0105097_105658991	3300009169	Freshwater Sediment	MNEQIREQLLALAYEQQDDVYGSSQRREFDCLIALIEDGTINTFEELAKYGIEQ*
Ga0114959_100534966	3300009182	Freshwater Lake	MKEQLLALAYAKEDEVFGSSERDEFDCLIALIEDGDVKTFEELATYGVEE*
Ga0114959_102991702	3300009182	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGIEK*
Ga0114971_101385205	3300009185	Freshwater Lake	MKEQLLALAYKQEDEVFGSSERDEFDCLIALIEDGTIDSFEELAKYGVEE*
Ga0114982_10146138	3300009419	Deep Subsurface	MKEQLLALAYEKEDEEFGSSERDEFDCLIALIEDGTINTFEELAKYGVKQ*
Ga0114982_10338213	3300009419	Deep Subsurface	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELARYGVEKA*
Ga0114982_11599813	3300009419	Deep Subsurface	MKEQLLDLAYKKQDEVFKNSERDEFDCLIALIEDGTIDTFEELAKYGVEE*
Ga0133913_104294942	3300010885	Freshwater Lake	MKEQLLALAYEQEDDVFGSSERDEFDCLIALIEDGTINTFEELARYGVEKG*
Ga0133913_123736314	3300010885	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFYCLIALIEDGTINTFEE
Ga0129318_102423112	3300011009	Freshwater To Marine Saline Gradient	MVMKEQLLALAYEQQDEFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEE*
Ga0157141_10046815	3300012346	Freshwater	MKEQLLALAYLREDDVFGSSERDEFDCLIALIEDGTINTFEELAKYGVE*
Ga0157138_10105226	3300012352	Freshwater	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTIDSFEELALYGVE*
Ga0157138_10436431	3300012352	Freshwater	MKEQLLALAYLQEDLVFGSSERDEFDCLIALIEDGTIDSFE
Ga0157138_10818632	3300012352	Freshwater	MKEQLLALAYEKEDEVFGSSERAEFDCLIALIEDGTIDTFEELAKYGVEE*
Ga0157497_10010738	3300012664	Freshwater	MKEQLLALAYLREDDVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVE*
Ga0157208_1000010142	3300012667	Freshwater	MREQLLALAYEKQDEVFANSERDEFDCLIVLIEDGTIDTFEELAKYGVER*
Ga0157208_100011079	3300012667	Freshwater	MKEQLLELAYEKQDEVFANSERDEFDCLIALIEDGAIDTFEELAKYGVERCEA*
Ga0119896_10067354	3300014810	Wastewater	MNEQIKEQLLALAYEKQDEFNNRDFECLVACIESGVIDSFEELATYGVTR*
Ga0182090_17336722	3300016797	Salt Marsh	MREQLLALAYKQEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVKR
Ga0181606_106060622	3300018048	Salt Marsh	MMIKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEQ
Ga0207193_11846353	3300020048	Freshwater Lake Sediment	MKELLNLLYTQRDEFSAREFDCLIALIEDGTISNFEELAKYGVEK
Ga0207193_14196383	3300020048	Freshwater Lake Sediment	MKEQLLALLYKKQGEVFLNSDGDESDFMALVWLIEDGTIDSFEELAEYGVKE
Ga0211732_10516282	3300020141	Freshwater	MKEQLLALAYKKEDEVFGSSERDEFDCLIALIEDGTIDTFEELSKYGVEE
Ga0211732_12704233	3300020141	Freshwater	MKEQLLALAYTQEDEFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE
Ga0211736_101819833	3300020151	Freshwater	MKEQLLALAYKKEDEVFGSSERDEFNCLIALIEDGTIDTFEELAKYGVEE
Ga0211735_101240701	3300020162	Freshwater	QLLALAYTQEDEFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE
Ga0211729_105523765	3300020172	Freshwater	MKEQLLALAYKKEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEE
Ga0211731_110302242	3300020205	Freshwater	MKEQLLALAYKQEDEFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE
Ga0213921_10460061	3300021952	Freshwater	MKEQLLALAYEKEDDVFGSSERDEFDCLIALIEDG
Ga0213922_10611833	3300021956	Freshwater	MKEQLLDLAYKKQDEVFKNSERDEFDCLIALIEDGTIDTFEELAKYGVEE
Ga0213922_10663892	3300021956	Freshwater	MKEQLLALAYEKEDDVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVER
Ga0222712_101729364	3300021963	Estuarine Water	MKEQLLALAYKQEDEVFGSSERDEFNCLIELIEDGTIDTFEKLAKYGVEE
Ga0196889_10217082	3300022072	Aqueous	MKNIITDQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK
Ga0196889_10301111	3300022072	Aqueous	QQVGLEMKEQLLALAYEKQDEVYACSEHEDFEAIIYLIEAGVISTFEELAKYGFEK
Ga0181354_10551323	3300022190	Freshwater Lake	MNEQIRQLSCRRQLLALAYEQEDQVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKR
Ga0181351_12804983	3300022407	Freshwater Lake	VKEQLLALAYEQEDEVFGSSERDEFDCLIGLIEDGTINTFEELAKYGVAR
Ga0236341_100016420	3300022591	Freshwater	MKEQLLALAYEKEDEEFGSSERDEFDCLIALIEDGTIDTFEELAKYGVKR
Ga0236341_100301715	3300022591	Freshwater	MTIKEQLLALAYEKEDEEFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEQ
Ga0236341_11163952	3300022591	Freshwater	MMKQLLDLLYKKQSEIYADPDGRDEFDCLIALIEDGTIDTFEELAKYGVEK
Ga0236341_11233701	3300022591	Freshwater	MKEQLLNLAYEKEDDVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEA
Ga0214919_1003052111	3300023184	Freshwater	MKEQLLALAYEQENEVFGSSECDEFDCLIALIEDGTINTFEELAKYGVEK
Ga0256681_117531984	3300023311	Freshwater	MKEQLLALAYKQEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEK
Ga0208426_100000580	3300025451	Aqueous	MNNSITEQLLALAYLKEDEVYDSSERDEFDCLIALIEDGTIDTFEELAKYGVEE
Ga0208426_10005044	3300025451	Aqueous	MNERIKEQLLALAYEQQDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK
Ga0208426_10040802	3300025451	Aqueous	MKEQLLALAYEKQDEVYACSEHEDFEAIIYLIEAGVISTFEELAKYGFEK
Ga0208426_10093483	3300025451	Aqueous	MNERMKEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK
Ga0208426_10398732	3300025451	Aqueous	MKEQLLALAYEQQDEVYACSESEDFAALIYLIEDGTIDTFEELAKYGFEK
Ga0208497_10050678	3300025466	Freshwater	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK
Ga0208134_10227927	3300025652	Aqueous	SDEGSGIMKNIITDQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFE
Ga0208916_100020043	3300025896	Aqueous	MKEQLLALAYEQQDEFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEE
Ga0208916_101744132	3300025896	Aqueous	MKNIITEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEELAKYGFEK
Ga0208916_105322342	3300025896	Aqueous	MKEQLLALAYEQQDEFGSSVGAEFDCLIALIEDGTIDTFEELARYGVEE
Ga0208916_105367323	3300025896	Aqueous	MNERMKEQLLALAYEQQDEVYECSEREDFDCLIALIEDGTIDTFEE
Ga0208133_10506816	3300027631	Estuarine	MKEQLLALAYKREDEVFGSSERDEFDCLIALIENGDIETFEELAYYGVK
Ga0209188_10338766	3300027708	Freshwater Lake	MKEQLLALAYAKEDEVFGSSERDEFDCLIALIEDGDIKTFEELARYGVEE
Ga0209188_12039323	3300027708	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGIEK
Ga0209599_100357233	3300027710	Deep Subsurface	MKEQLLALAYEKEDEEFGSSERDEFDCLIALIEDGTINTFEELAKYGVKQ
Ga0209599_100778122	3300027710	Deep Subsurface	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELARYGVEKA
Ga0209297_1000010149	3300027733	Freshwater Lake	MKEQLLALAYEQEDEFGSSDRDEFDCLIALIEDGTINTFEELAKYGVEK
Ga0209297_100420917	3300027733	Freshwater Lake	LREQLLKLAYEKQDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEK
Ga0209087_10983103	3300027734	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELARYGVEK
Ga0209085_10537172	3300027741	Freshwater Lake	MNIKEQLLALAYEQEDQVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKQ
Ga0209084_100494414	3300027749	Freshwater Lake	MNIKEQLLALAYEQEDRVFGSSERDEFDCLIALIEDGTIDTFEELARYGVKQ
Ga0209134_100310444	3300027764	Freshwater Lake	MKEQLLNLAYEKEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEL
Ga0209134_101912312	3300027764	Freshwater Lake	MKEQLLALAYEQQDEFGSSERDEFDCLIALIEDGTIDTFEELARYGVEE
Ga0209086_1000019559	3300027770	Freshwater Lake	MKEQLLALAYEQEDDVFGSSERDEFDCLIALIEDGTINTFEELARYGVERSGE
Ga0209086_100562748	3300027770	Freshwater Lake	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEE
Ga0209246_100480146	3300027785	Freshwater Lake	MKEQLLNLAYEKEDEVFGSSERDEFDCLIALIEDGTIDTFEELAKYGVEA
Ga0209246_101431363	3300027785	Freshwater Lake	MKEQLLALAYEQEDLVFGSSERDEFDCLIALIEDGTINTFEELAKYGVTQ
Ga0209246_101938153	3300027785	Freshwater Lake	MKEQLLALAYEQQDEFGSSVGAEFDCLIALIEDGTIDTFEELARYGVEK
Ga0209246_103733582	3300027785	Freshwater Lake	DLLNLLYAQRDEFSAREFDCLVALIEDGTISTFEELAAYGVEE
Ga0209107_100014058	3300027797	Freshwater And Sediment	MKEQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVE
Ga0209353_100147688	3300027798	Freshwater Lake	MKDLLNLLYAQRDEFSAREFDCLVALIEDGTISTFEELAAYGVEE
Ga0209230_1000739214	3300027836	Freshwater And Sediment	MNEQIRQLLALAYEQEDEVFGSSERDEFDCLIALIEDGTINTFEELAKYGVEK
Ga0247723_100202322	3300028025	Deep Subsurface Sediment	MNELLNLLYTQRDEFSAIEFERLVALIEDGTIVSFEELAQYGVEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences