Metagenome / Metatranscriptome Family F074539

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074539
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	73 residues
Representative Sequence	MSPQAKRRQRSAKAAVRRGTTLLQSDRPRRVETRMAPPRYAERRHAKPGAGIKRSRANMAPKSR
Number of Associated Samples	95
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.18 %
% of genes near scaffold ends (potentially truncated)	21.01 %
% of genes from short scaffolds (< 2000 bps)	75.63 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.588 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.126 % of family members)
Environment Ontology (ENVO)	Unclassified (26.050 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.134 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.57% β-sheet: 0.00% Coil/Unstructured: 80.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00582	Usp	16.81
PF13426	PAS_9	6.72
PF00689	Cation_ATPase_C	5.88
PF00989	PAS	5.04
PF01226	Form_Nir_trans	5.04
PF03729	DUF308	5.04
PF00072	Response_reg	4.20
PF02954	HTH_8	3.36
PF00158	Sigma54_activat	2.52
PF00691	OmpA	2.52
PF08282	Hydrolase_3	2.52
PF00690	Cation_ATPase_N	1.68
PF13520	AA_permease_2	1.68
PF00702	Hydrolase	0.84
PF02775	TPP_enzyme_C	0.84
PF00011	HSP20	0.84
PF01339	CheB_methylest	0.84
PF08448	PAS_4	0.84
PF12849	PBP_like_2	0.84
PF08352	oligo_HPY	0.84
PF02518	HATPase_c	0.84
PF00753	Lactamase_B	0.84
PF12911	OppC_N	0.84
PF13188	PAS_8	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	7.56
COG2116	Formate/nitrite transporter FocA, FNT family	Inorganic ion transport and metabolism [P]	5.04
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	5.04
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	2.52
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	2.52
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	2.52
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	2.52
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	2.52
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.68
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	22.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	22.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.84 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	18.49 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.84 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	7.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.84 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.84 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.84 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.84 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.84 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.84 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.84 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.84 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.84 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.84 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.84 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.84 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.84 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.84 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.84 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100488745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	975	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101484416	Not Available	1658	Open in IMG/M
3300000443\|F12B_11997182	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300000559\|F14TC_101206262	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300000955\|JGI1027J12803_104284698	Not Available	1839	Open in IMG/M
3300000955\|JGI1027J12803_108888747	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300000956\|JGI10216J12902_107401850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1209	Open in IMG/M
3300003993\|Ga0055468_10155971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	682	Open in IMG/M
3300004114\|Ga0062593_100525651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1105	Open in IMG/M
3300004463\|Ga0063356_102103929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	857	Open in IMG/M
3300004633\|Ga0066395_10146141	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300005331\|Ga0070670_101466508	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_103445740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	808	Open in IMG/M
3300005353\|Ga0070669_100208352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1541	Open in IMG/M
3300005457\|Ga0070662_100481990	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005526\|Ga0073909_10364258	Not Available	673	Open in IMG/M
3300005555\|Ga0066692_10585332	Not Available	702	Open in IMG/M
3300005577\|Ga0068857_100201527	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300005844\|Ga0068862_100714995	Not Available	971	Open in IMG/M
3300006844\|Ga0075428_100003365	All Organisms → cellular organisms → Bacteria	17490	Open in IMG/M
3300006844\|Ga0075428_100172844	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300006844\|Ga0075428_100585522	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300006845\|Ga0075421_100037595	All Organisms → cellular organisms → Bacteria	6136	Open in IMG/M
3300006846\|Ga0075430_101549361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	544	Open in IMG/M
3300006847\|Ga0075431_101428728	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006852\|Ga0075433_10162426	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300006880\|Ga0075429_100260836	Not Available	1517	Open in IMG/M
3300006904\|Ga0075424_101968597	Not Available	617	Open in IMG/M
3300006954\|Ga0079219_10486421	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300009094\|Ga0111539_11813721	Not Available	707	Open in IMG/M
3300009100\|Ga0075418_10005183	All Organisms → cellular organisms → Bacteria	14748	Open in IMG/M
3300009553\|Ga0105249_12319741	Not Available	609	Open in IMG/M
3300009792\|Ga0126374_11358340	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300009818\|Ga0105072_1071968	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009836\|Ga0105068_1059096	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010043\|Ga0126380_10221035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1286	Open in IMG/M
3300010047\|Ga0126382_10704273	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300010362\|Ga0126377_12742525	Not Available	567	Open in IMG/M
3300010362\|Ga0126377_12988753	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300011445\|Ga0137427_10415191	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012206\|Ga0137380_10003382	All Organisms → cellular organisms → Bacteria	13865	Open in IMG/M
3300012206\|Ga0137380_10440205	Not Available	1154	Open in IMG/M
3300012353\|Ga0137367_10061698	All Organisms → cellular organisms → Bacteria	2798	Open in IMG/M
3300012355\|Ga0137369_10318400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300012360\|Ga0137375_10067102	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
3300012360\|Ga0137375_11473415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300012532\|Ga0137373_10874226	Not Available	661	Open in IMG/M
3300012948\|Ga0126375_10230952	Not Available	1238	Open in IMG/M
3300013297\|Ga0157378_12033305	Not Available	625	Open in IMG/M
3300015371\|Ga0132258_10182413	All Organisms → cellular organisms → Bacteria	5074	Open in IMG/M
3300015371\|Ga0132258_10197681	All Organisms → cellular organisms → Bacteria	4875	Open in IMG/M
3300015371\|Ga0132258_12764609	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300015372\|Ga0132256_100466440	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300015373\|Ga0132257_101659652	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300015374\|Ga0132255_102726294	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300017939\|Ga0187775_10181393	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	770	Open in IMG/M
3300017997\|Ga0184610_1098553	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300017997\|Ga0184610_1113683	Not Available	867	Open in IMG/M
3300018031\|Ga0184634_10308893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	725	Open in IMG/M
3300018031\|Ga0184634_10439707	Not Available	590	Open in IMG/M
3300018053\|Ga0184626_10159782	Not Available	958	Open in IMG/M
3300018056\|Ga0184623_10189124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	948	Open in IMG/M
3300018059\|Ga0184615_10396452	Not Available	758	Open in IMG/M
3300018063\|Ga0184637_10053529	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300018070\|Ga0184631_10133700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	990	Open in IMG/M
3300018075\|Ga0184632_10360446	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018076\|Ga0184609_10585870	Not Available	501	Open in IMG/M
3300018078\|Ga0184612_10143321	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300018084\|Ga0184629_10201026	Not Available	1030	Open in IMG/M
3300025567\|Ga0210076_1090492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	669	Open in IMG/M
3300025917\|Ga0207660_10490171	Not Available	996	Open in IMG/M
3300025923\|Ga0207681_10180897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1606	Open in IMG/M
3300027068\|Ga0209898_1006644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1367	Open in IMG/M
3300027775\|Ga0209177_10227149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	678	Open in IMG/M
3300027821\|Ga0209811_10029624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1819	Open in IMG/M
3300027874\|Ga0209465_10035305	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300027907\|Ga0207428_10000013	All Organisms → cellular organisms → Bacteria	346742	Open in IMG/M
3300027909\|Ga0209382_10138099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	2833	Open in IMG/M
3300027909\|Ga0209382_10273668	Not Available	1911	Open in IMG/M
3300027957\|Ga0209857_1054461	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300028589\|Ga0247818_11253938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300028592\|Ga0247822_11147540	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	647	Open in IMG/M
3300028812\|Ga0247825_10026888	All Organisms → cellular organisms → Bacteria	3777	Open in IMG/M
3300028812\|Ga0247825_10549853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	824	Open in IMG/M
3300030006\|Ga0299907_10015970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5531	Open in IMG/M
3300030006\|Ga0299907_10268542	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300030336\|Ga0247826_10037045	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300030620\|Ga0302046_10022875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5171	Open in IMG/M
3300031199\|Ga0307495_10197127	Not Available	551	Open in IMG/M
3300031226\|Ga0307497_10436400	Not Available	633	Open in IMG/M
3300031229\|Ga0299913_10577370	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031538\|Ga0310888_10191938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1118	Open in IMG/M
3300031548\|Ga0307408_100137983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1910	Open in IMG/M
3300031548\|Ga0307408_100940725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	793	Open in IMG/M
3300031847\|Ga0310907_10006425	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300031892\|Ga0310893_10114786	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031908\|Ga0310900_10057799	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300031908\|Ga0310900_10965674	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031908\|Ga0310900_11010630	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300031911\|Ga0307412_10568013	Not Available	955	Open in IMG/M
3300031944\|Ga0310884_10112858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1350	Open in IMG/M
3300031949\|Ga0214473_10055745	All Organisms → cellular organisms → Bacteria → Proteobacteria	4628	Open in IMG/M
3300031949\|Ga0214473_10329486	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300031995\|Ga0307409_100768057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300032091\|Ga0318577_10033084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2246	Open in IMG/M
3300032211\|Ga0310896_10469284	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300033417\|Ga0214471_10762337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	757	Open in IMG/M
3300033551\|Ga0247830_11422162	Not Available	554	Open in IMG/M
3300033815\|Ga0364946_154484	Not Available	532	Open in IMG/M
3300034177\|Ga0364932_0118176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1008	Open in IMG/M
3300034659\|Ga0314780_036097	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300034661\|Ga0314782_095707	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.39%
Host-Associated	Host-Associated	33.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.94%
Plants	Host-Associated → Plants	33.61%
Aquatic	Environmental → Aquatic	13.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.05%
Sediment	Environmental → Aquatic → Sediment	11.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.56%
Marine	Environmental → Aquatic → Marine	1.68%
Floodplain	Environmental → Terrestrial → Floodplain	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	5.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.20%
Sand	Environmental → Terrestrial → Soil → Sand	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.20%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.36%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.36%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1004887452	3300000364	Soil	MSRSKRKSNAMSPQAERRQRSVKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR*
INPhiseqgaiiFebDRAFT_1014844161	3300000364	Soil	MKRSSGQGGTHRPTSSVPSSPQARRRQRSATVAVRRDTTLVQSRVPRRVESRLAPPKYAERQHARPGAGIKRSRAN
F12B_119971821	3300000443	Soil	MKRVSPPPKARPQRSPGAVSPQAKRRQRSAKVAVRRGTTLLESTKTARHMETRLAPPRYAERRHARPGAGIKRSRANMAQKPR*
F14TC_1012062622	3300000559	Soil	MSRSSRQSKGMSPQAKRRQRSAKVAIRRDTTLIQSTRPRRVESRMAPPKYAERRHARPGAGIKRSRASMAPKPR*
JGI1027J12803_1042846982	3300000955	Soil	MKRSPRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERQHARPGAGIKRSRANMSPKSR*
JGI1027J12803_1088887474	3300000955	Soil	MSRSKRKSNAMSPQAKRRQRSAKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR*
JGI10216J12902_1074018501	3300000956	Soil	MSPQAKRRQRSAKALVRRGATLIQSDRPRRVETRMAPPKYAERRHAKPGAGVKRSRANMAPRSR*
Ga0055468_101559712	3300003993	Natural And Restored Wetlands	TTSPQAKRRQRSAKVAVRRDTTLLQSETPRRVESRMAPPRYTERRRAKPGAGIKRARGVMVPKQR*
Ga0062593_1005256512	3300004114	Soil	MKRSPRSPKARRPTDPAAMSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR*
Ga0063356_1021039291	3300004463	Arabidopsis Thaliana Rhizosphere	MKGLPRQPTARRPSRPVASSPQAKRRQRSATVAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARAAMAPKPR*
Ga0066395_101461412	3300004633	Tropical Forest Soil	MSPQAKRRQRSAKAAVRRGSTLLQSDRPRRVETRMAPPKYAERRHAKPGAGVKRSRANMAPRSR*
Ga0065712_103957352	3300005290	Miscanthus Rhizosphere	QRSATAAVRRDTTLVQSEVPRRVQTRMAPPRYAERQHARPGAGIKRSRANMSSRAR*
Ga0070670_1014665081	3300005331	Switchgrass Rhizosphere	MKRSARKKNPRRPTTPASMSPQAKRRQRSATVAVRRDTTLLQSEVPRRVETRLAPPKYAERQHARPGAGIKRSRANMSPRAR*
Ga0066388_1034457402	3300005332	Tropical Forest Soil	MSPQAERRRRSAKAAVRLGATLLQSDRPRRPETRMAPPKYAERRRAKPGAGVKRSRANMAQRPR*
Ga0070669_1002083522	3300005353	Switchgrass Rhizosphere	MKRSPRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERHHARPGAGIKRSRANMSPKSR*
Ga0070662_1004819901	3300005457	Corn Rhizosphere	RGHMKRSRRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERHHARPGAGIKRSRANMSPKSR*
Ga0073909_103642582	3300005526	Surface Soil	MSRSKRKSKAMSPQAKRRQRSAKVAFRRDATLVQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR*
Ga0066692_105853322	3300005555	Soil	MKRSPRQSNAMSPQAKRRQRSAKTAVRRGTTLIESDRPRRVETRMAPPRYAERRHAKPGAGIKRSRANMAPKPR*
Ga0068857_1002015274	3300005577	Corn Rhizosphere	MKRSARKKNPRRPTTPASMSPQAKRRQRSATVAVRRDTTLLQSDVPRRVETRMAPPKYAERQHARPGAGIKRSRANMSPRAR*
Ga0068862_1007149952	3300005844	Switchgrass Rhizosphere	MSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR*
Ga0075428_10000336515	3300006844	Populus Rhizosphere	MSPQAKRRQRSATAAVRRDTTLLQANMGRRVETRMAPPKYAERRHAKPGAGIKRSRANMSRKSR*
Ga0075428_1001728441	3300006844	Populus Rhizosphere	MSRSRRLSKTMSAQAKRRQRSAKAAIRRGSTLDQSQVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRSR*
Ga0075428_1005855221	3300006844	Populus Rhizosphere	MSPQAKRRQRSAKVAVRRGTTLLESTKAARHVETRMAPPKYAERRHARPGAGIKLSRANMAPKPR*
Ga0075421_1000375952	3300006845	Populus Rhizosphere	VASSPQAKRRQRSATAAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRAGGDGPKPR*
Ga0075421_1014782802	3300006845	Populus Rhizosphere	MPQKKKPALRPSKRQRSAKVAVKRDTMLLQSDVPRRVESRMAPARNAERRRARPGAGIKGARGAMAKRSR*
Ga0075421_1024860472	3300006845	Populus Rhizosphere	RAPSKRQRSATVAVKRGTMLLQSDRPRRVEMRLAPPRKAERQHARPGAGIKRARGVMTKRAR*
Ga0075430_1015493611	3300006846	Populus Rhizosphere	MSPQAKRRQRSATAAVRRDTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRANMSPRSR*
Ga0075431_1014287281	3300006847	Populus Rhizosphere	MKRASPPPKGRRQDNPGAMSPQAKRRQRSAKVAVRRGTTLLESTKAARRVETRMAPPKYAERRHARPGAGIKLSRANMAPKPR*
Ga0075433_101624262	3300006852	Populus Rhizosphere	MSRSRRLSKTMSAQAKRRQRSAKAAIRRGSTLDQPQVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRSR*
Ga0075429_1002608361	3300006880	Populus Rhizosphere	MSAQAKRRQRSAKAAIRRGSTLDQSQVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRSR*
Ga0075429_1007404511	3300006880	Populus Rhizosphere	MPQRKKPTPTPSKRQRSATVAVKRDTMLLQSDRPRRVESRIAPMRRAERRHARPGAGIKRARGVMTKKSR*
Ga0075424_1019685971	3300006904	Populus Rhizosphere	MKRSAKAAVQRGTMLLQSDQPRRVDSRTAPPRYAERRHARPGAGIKRSRANMTPRVRGRRSGA*
Ga0079219_104864212	3300006954	Agricultural Soil	MKRSAKARQNPVAMSPQARRRQPSAKVAVRRGTMLLESTRAAGHVETRMAPPRYAERRHAKPGAGIKRSRANMASRPR*
Ga0111539_118137211	3300009094	Populus Rhizosphere	MKRSARQKNPRRPTTPASMSPQAKRRQRSATAAVRRDTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRANMSPRAR*
Ga0075418_1000518313	3300009100	Populus Rhizosphere	MSPQAKRRQRSATAAVRRDTTLLQANMARRVETRMAPPKYAERRHAKPGAGIKRSRANMSRKSR*
Ga0105249_123197412	3300009553	Switchgrass Rhizosphere	MKRSPRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERHHARPGAGIKRS
Ga0105249_125365672	3300009553	Switchgrass Rhizosphere	QRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR*
Ga0126374_113583401	3300009792	Tropical Forest Soil	MSPQARRRQKSAKAAVRRGATLMQSDRPRRVETRIAPPKYAERRHAKPGAGVKRSRANMAPRSR*
Ga0105072_10719681	3300009818	Groundwater Sand	MSPQAKRRQRSAKAAVRRGTTLLQSDRPRRMETRMAPPRYAERRHAKPGAGIKRSRANMAPKSR*
Ga0105068_10590962	3300009836	Groundwater Sand	RQSKGMSPQAKRRQRSAKAAVRRGTTLLQSDRPRRMETRMAPPRYAERRHAKPGAGIKRSRANMAPKSR*
Ga0126380_102210351	3300010043	Tropical Forest Soil	MSPQARRRQRSAKAAVRRGATMMQSDRPRRVETRMAPPKYAERRHAKPGAGVKRSRANM
Ga0126382_107042731	3300010047	Tropical Forest Soil	MSPQARRRQKSAKAAVRRGATMMQSDRPRRVETRMAPPKYAERRHAKPGAGVKRSRANMAPRSR*
Ga0126377_127425251	3300010362	Tropical Forest Soil	MKRTLRRSPKAARRNSPAAVSPQAKRRQRSATAAVRRGTMSLQSDVRRRMESRLAPPKYTERQHARPGAGIKRSRASMSPKSR*
Ga0126377_129887532	3300010362	Tropical Forest Soil	MSPQAKRRQRSAKAAIRQGSTLNESKVPRRIENRMAPPKYAERRHARPGAGIKRSKASMARRSR*
Ga0137427_104151911	3300011445	Soil	MKRSSPGKKARRPAPPVAGSPQAKRRQRSATAAVRRDTTLVQSEVPRRVETRMAPPRYAERRHARPGAGIKRSRANMSQRSR*
Ga0137380_1000338212	3300012206	Vadose Zone Soil	MKKSKITTTSHQGKRRQRSAKVAVRRGATLLETDRRRPMEFRLAPPRYTERRHAKPGAGIKRSRAAMAQKSR*
Ga0137380_104402051	3300012206	Vadose Zone Soil	MKKSKITTTSRQGKRRQRSAKVAVRRGTTLLETDLRRRMEVRLAPPRYTERQHARPGAGIKRSRAAMAQKSR*
Ga0137367_100616982	3300012353	Vadose Zone Soil	MSPQAKRRQRSAKTAVRRGTTLIESDRPRRVETRMAPPRYAERRHAKPGAGIKRSRANMAPKPR*
Ga0137369_103184001	3300012355	Vadose Zone Soil	AMSPQAKRRQRSAKTAVRRGTTLIESDRPRRVETRMAPPRYAERRHARPGAGIKRSRANMAPKPR*
Ga0137375_100671025	3300012360	Vadose Zone Soil	MKRSPRQPKARRPNDPAAMSPQAKRRQRSATVAVRRDTTLLQANVARRVETRMAPPKYAERQHARPGAGIKRSRANMSPKSR*
Ga0137375_114734152	3300012360	Vadose Zone Soil	MKRSPRQSNAMSPQAKRRQRSAKTAVRRGTTLIESDRPRRVETRMAPPRYAERRHAKPGAGIKRS
Ga0137373_108742262	3300012532	Vadose Zone Soil	MAAKKKAGGKPGKSAKAAVRRGTTILESDLPRRREVRLAPPRQAERRHARPGAGTKRARAAMSPKSR*
Ga0126375_102309522	3300012948	Tropical Forest Soil	MSPQARRRQKSAKAAVRRGATVMQSDRPRRVETRMAPPKYAEQRHAKPGAGVKRSRANMAPRSR*
Ga0157378_120333052	3300013297	Miscanthus Rhizosphere	MSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERHHARPGAGIKRSRANMSPKSR*
Ga0132258_101824135	3300015371	Arabidopsis Rhizosphere	MKRSPRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVEPRMAPPKYTERQHARPGAGIKRSRANMSPKSR*
Ga0132258_101976815	3300015371	Arabidopsis Rhizosphere	MSPQAKRRQRSATAAVRRDTTLLQANMARRVETRVAPPKYAERRHAKPGAGIKRSRANMSRKSR*
Ga0132258_127646091	3300015371	Arabidopsis Rhizosphere	MSRSKRKSNAMSPQAKRRQRSVKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR*
Ga0132256_1004664402	3300015372	Arabidopsis Rhizosphere	MSPQAKRRQRSAKAAIRRGSTLDQSKVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRSR*
Ga0132257_1016596522	3300015373	Arabidopsis Rhizosphere	SKRKSKAMSPQAKRRQRSAKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR*
Ga0132255_1027262942	3300015374	Arabidopsis Rhizosphere	MSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERQHARPGAGIKRSRANMSPKSR*
Ga0187775_101813931	3300017939	Tropical Peatland	MSRSRRQSKAISAQVKRRATAAIRRDTTLLQSNRPRRVESRMAPPKYAERRHAKPGAGIKRSRASMAKKSR
Ga0184610_10985532	3300017997	Groundwater Sediment	MKRSSPRSPKASRRNDRAATSPQAKRRQRSATAAVRRGTTLVQSDVPRRVATRMAPPKYAERQHARPGAGIKRSRANMSPKSR
Ga0184610_11136831	3300017997	Groundwater Sediment	MNRSPRQPKARRPNDPAVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYAERQHARPGAGIKRSRANMSPKSR
Ga0184634_103088931	3300018031	Groundwater Sediment	MKRSPRQSNAMSPQAKRRQRSAKTAIRRGTTLIESDRPRTVETRMAPPKYAERRHARPGAGIKRSRANMAPKPR
Ga0184634_104397072	3300018031	Groundwater Sediment	MKRSPRQPKARRPNDPAVMSPQAKRRQRSATAAGRRDTTLLQSDIARRIETRMAPPKYAERQHARPGAGIKRSRANMSPKSR
Ga0184626_101597823	3300018053	Groundwater Sediment	MRGSPRESRAMSPQAKRRQRSAKAAVRRGTTLIESDRPQRVETRMAPPRYAERRHAKPGAGIKRSRANMAPKPR
Ga0184623_101891242	3300018056	Groundwater Sediment	MKRSSPRSPKASRRNDRAATSPQAKRRQRSATAAVRRGTTLVQSDVPRRVATRMAPPKYAERQHARPGAGIKRSRANMSPQVSLRARVTVGQELAT
Ga0184615_103964521	3300018059	Groundwater Sediment	MKRSPRQPKARRPNDPAVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR
Ga0184637_100535292	3300018063	Groundwater Sediment	MKRSSPRSPKASRRNDRAATSPQAKRRQRSATAAVRRGTTLVQSAVPRRVETRMAPPKYAERQHARPGAGIKRSRANMSPKSR
Ga0184631_101337001	3300018070	Groundwater Sediment	KARRPSDPAVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYAERQHARPGAGIKRSRANMSSKSR
Ga0184632_103604462	3300018075	Groundwater Sediment	MKRLPRQSKACRPQSPAAMSPQAKRRQRSATAAVRRDTTLLQSDVPRRIETRMAPPKYAERQHARPGAGIKRSRANMSPRSR
Ga0184609_105858701	3300018076	Groundwater Sediment	MKRLPRQSKACRPQSPAAMSPQAKRRQRSATAAVRRDTTLLQSDVPRRIETRMAPPKYAERQHARPGAGIKR
Ga0184612_101433213	3300018078	Groundwater Sediment	MKRSSPRSPKASRRNNPAAMSPQAKRRQRSATTAVRRDTTLVQSDVPRRVETRMAPPKYAERQHARPGAGIKRSRANMSPKSR
Ga0184629_102010262	3300018084	Groundwater Sediment	MKRSPRQPKARRPNDPAVMSPQAKRRQRSATAALRRDTTLLQSNIPRRVESRMAPPRYAERQHARPGAGIKRSRANMTPRSR
Ga0210076_10904922	3300025567	Natural And Restored Wetlands	MTRTPRQKTPGRSTRPVTTSPQAKRRQRSAKVAVRRDTTLLQSETPRRVESRMAPPRYTERRRAKPGAGIKRARGVMVPKQR
Ga0207660_104901713	3300025917	Corn Rhizosphere	MKRSPRSPKARRPTDPAAMSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR
Ga0207681_101808972	3300025923	Switchgrass Rhizosphere	MKRSPRQPKARRPNDPTVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYTERHHARPGAGIKRSRANMSPKSR
Ga0209898_10066442	3300027068	Groundwater Sand	MSPQAKRRQRSAKAAVRRGTTLLQSDRPRRVETRMAPPRYAERRHAKPGAGIKRSRANMAPKSR
Ga0209177_102271492	3300027775	Agricultural Soil	MKRSAKARQNPVAMSPQARRRQPSAKVAVRRGTMLLESTRAAGHVETRMAPPRYAERRHAKPGAGIKRSRANMASRPR
Ga0209811_100296243	3300027821	Surface Soil	MSRSKRKSKAMSPQAKRRQRSAKVAFRRDATLVQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0209465_100353053	3300027874	Tropical Forest Soil	MSPQARRRQKSAKAAVRRGATVMQSDRPRRVETRMAPPKYAERRHAKPGAGVKRSRANMAPRSR
Ga0207428_10000013340	3300027907	Populus Rhizosphere	MSRSRRLSKTMSAQAKRRQRSAKAAIRRGSTLDQSQVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRSR
Ga0209382_101380991	3300027909	Populus Rhizosphere	MKGSPRQPTARRPSRPVASSPQAKRRQRSATAAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARAAMAP
Ga0209382_102736681	3300027909	Populus Rhizosphere	MSRSRRLSKTMSAQAKRRQRSAKAAIRRGSTLDQSQVPRRIESRMAPPKYAERRHAKPGAGVKRSKASMAPRS
Ga0209382_118215122	3300027909	Populus Rhizosphere	SPRAPSKRQRSATVAVKRGTMLLQSDRPRRVEMRLAPPRKAERQHARPGAGIKRARGVMTKRAR
Ga0209857_10544611	3300027957	Groundwater Sand	QSKGMSPQAKRRQRSAKAAVRRGTTLLQSDRPRRMETRMAPPRYAERRHAKPGAGIKRSRANMAPKSR
Ga0247818_112539381	3300028589	Soil	VASSPQAKRRQRSATVAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARAAMAPKPR
Ga0247822_111475403	3300028592	Soil	MSPQAKRRQRSATAAVRRDTTLLQANMGRRVETRMAPPKYAERRHAKPGAGIKRSRANMS
Ga0247825_100268885	3300028812	Soil	MKGLPRQPTARRPSRPVASSPQAKRRQRSATVAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARAAMAPKPR
Ga0247825_105498531	3300028812	Soil	MKGSPRQPTARRPSRPVASSPQAKRRQRSATAAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIK
Ga0299907_100159703	3300030006	Soil	MKRSPARSTKAGRPSSPTAGSPQAKRRQRSAKAAVRRDTTLVQSDIPRRVESRLAPPRYTERRHARPGAGIKRSRASMSRPSR
Ga0299907_102685422	3300030006	Soil	MKRSPGRSPKAGRPSRPTAGSPQAKRRQRSAKAAVRRGTTLLQSDVPRRVESRLAPPRYTERQRARPGAGIKRSRASMSRGSR
Ga0247826_100370454	3300030336	Soil	MKGLPRQPTARRPSRPVASSPQAKRRQRSATVAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARAAMAPKPC
Ga0302046_100228754	3300030620	Soil	MKRSRARSTKAGRPSSPTAGSPQAKRRQRSAKAAVRRDTTLVQSDIPRRVESRLAPPRYTERRHARPGAGIKRSRASMSRPSR
Ga0307495_101971271	3300031199	Soil	MSRSKRKLNALSPQAKRRQRSAKVALRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0307497_104364002	3300031226	Soil	MSRSKRKSNAMSPQAKRRQRSAKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMAAKSR
Ga0299913_105773703	3300031229	Soil	MKRSPARSTKAGRPSSPTAGSPQAKRRQRSAKAAVRRDTTLVQSDIPRRVESRLAPPRYTERRHARPGAGIKRSRASMSRTSR
Ga0310888_101919382	3300031538	Soil	MSRSKRKSNAMSPQAKRRQRSAKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0307408_1001379832	3300031548	Rhizosphere	MTRSPKAPGPKKPNVTSPQAKRRQRSANAAVRRDTMLIQSDVPRRVETRLAPPRYTERRRAKPGAGIKRSRASMSAKPR
Ga0307408_1009407252	3300031548	Rhizosphere	MKGSQRQPTTRRPGRPVASSPQAKRRQRSATVAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRARATMSPKPR
Ga0310907_100064253	3300031847	Soil	MKRSPRSPKARRPIDPAAMSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR
Ga0310893_101147861	3300031892	Soil	PTDPAAMSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMSPKSR
Ga0310900_100577993	3300031908	Soil	MSPQAKRRQRSATAAVRRDTTLLQANMARRVETRMAPPKYAERRHAKPGAGIKRSRANMSRKSR
Ga0310900_109656741	3300031908	Soil	MSRSKRKSNAMSPQAKRRQRSVKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0310900_110106302	3300031908	Soil	MSRSKRKSKAMSPQAKRRQRSAKVAFRRDATLVQTDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0307412_105680131	3300031911	Rhizosphere	MTRSPKAPGPKKPNVTSPQAKRRQRSANATVRRDTMLIQSDVPRRVETRLAPPRYTERRRAKPGAGIKRSRASMSAKPR
Ga0307412_113983141	3300031911	Rhizosphere	MPQKKKRPPQPSKRQRSATVAVKRDTMLLQSARPRRVESRMAPPPKAERQHARPGAGIKRARGVMTKKPR
Ga0310884_101128581	3300031944	Soil	MKRSPRSPKARRPTDPAAMSPQAKRRQRSATAAVRRGTTLVQSEVPRRVETRMAPPKYAERQHARPGAGIKRSRASMS
Ga0214473_100557452	3300031949	Soil	MKRSPRQPKARRPNDPAVMSPQAKRRQRSATAAVRRDTTLLQANIARRVETRMAPPKYAERQHARPGAGVKRSRANMSPKSR
Ga0214473_103294864	3300031949	Soil	ARRAKNPAAMSPQAKRRQRSAKAAVRRDTMLLQSDTPRRMETRMAPPKYAERQHARPGAGIKRARASMSAKPR
Ga0307409_1007680571	3300031995	Rhizosphere	MTRSPKAPGPKKPNVTSPQAKRRQRSANAAVRRDTMLIQSDVPRRVETRLAPPRYTERRRAKPGAGIKRSRASLSA
Ga0318577_100330844	3300032091	Soil	MPAPSRQSKRTSPQAKRRQRSAKAAVRRGATLIQSDRPRRIETRMAPPKYAERRHAKPGAGVKRSRAN
Ga0310896_104692842	3300032211	Soil	MSRSKRKSNGMSPQAKRRQRSAKVAFRRDATLIQSDQPRRVETRMAPPRYAERRHAKPGAGIKRSRANMASKSR
Ga0214471_107623372	3300033417	Soil	MKRSSKARRPDSIAAMSPQAKRRQRSAKATVRRDTMLLQSDTARRVEPRLAPPRYTERRRAKPGAGIKRSRASMASRPR
Ga0247830_114221621	3300033551	Soil	MKGSPRQPTARRPSRPVASSPQAKRRQRSATAAVRRDTTLLQSGTPRRVETRMAPPKYAERRHAKPGAGIKRAWAAMAPKPR
Ga0364946_154484_91_285	3300033815	Sediment	MSPQAKRRQRSAKAAVRRDTMLLQSDIPRRVATRMAPPKYAERQHARPGAGIKRSRASMAPKSR
Ga0364932_0118176_820_1008	3300034177	Sediment	MSPQAKRRQRSATAAVRRDTTLLQANIARQVETRMAPPKYAERQHARPGAGVKRSRANMSPKS
Ga0314780_036097_29_223	3300034659	Soil	MSPQAKRRQRGAKAAIRRGSTLSQSKVPRRIESRMAPPKYAERRHAKPGAGIKRSKANMAPRSR
Ga0314782_095707_33_227	3300034661	Soil	MSPQAKRRQRGTKAAIRRGSTLSQSKVPRRIESRMAPPKYAERRHAKPGAGVKRSKANMAPRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences