Metagenome Family F074535

Overview

Basic Information

• Family ID: F074535
• Family Type: Metagenome
• Number of Sequences: 119
• Average Sequence Length: 67 residues
• Representative Sequence: VRAGWTRENLRHALAMLRYGSNPAATVYDSIGPDFFLALEPGWLNLGLWEGDGSDPAEAAVAVRRLV
• Number of Associated Samples: 111
• Number of Associated Scaffolds: 119

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 68.91 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 96.64 %
• Associated GOLD sequencing projects: 105
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (97.479 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.807 % of family members)
• Environment Ontology (ENVO): Unclassified (26.891 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (33.613 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 32.63%
  β-sheet: 0.00%
  Coil/Unstructured: 67.37%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF12698	ABC2_membrane_3	58.82
PF00202	Aminotran_3	5.88
PF00027	cNMP_binding	2.52
PF02518	HATPase_c	2.52
PF05362	Lon_C	1.68
PF00106	adh_short	0.84
PF13460	NAD_binding_10	0.84
PF01743	PolyA_pol	0.84
PF08940	DUF1918	0.84
PF01717	Meth_synt_2	0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	1.68
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	1.68
COG0617	tRNA nucleotidyltransferase/poly(A) polymerase	Translation, ribosomal structure and biogenesis [J]	0.84
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.84
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.84

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.32 %
Unclassified	root	N/A	1.68 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	1.68 %
Viruses	superkingdom	All Organisms → Viruses	0.84 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Unclassified	root	N/A	1.68 %

Level 4

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.44 %
Unclassified	root	N/A	1.68 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Unclassified	root	N/A	1.68 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Unclassified	root	N/A	1.68 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Unclassified	root	N/A	1.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	83.19 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %
Unclassified	root	N/A	1.68 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2124908041|P3_CLC_ConsensusfromContig44491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865
3300000364|INPhiseqgaiiFebDRAFT_101061857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620
3300000858|JGI10213J12805_11127978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906
3300000891|JGI10214J12806_10061445	All Organisms → cellular organisms → Bacteria	1020
3300001686|C688J18823_10367371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935
3300002123|C687J26634_10332786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507
3300003997|Ga0055466_10000249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4747
3300004025|Ga0055433_10010666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1429
3300004463|Ga0063356_103848320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646
3300004480|Ga0062592_100234058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1330

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	17.65%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	13.45%
Plants	Host-Associated → Plants	17.65%
Terrestrial	Environmental → Terrestrial	68.91%

Category

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	1.68%
Freshwater	Environmental → Aquatic → Freshwater	7.56%
Marine	Environmental → Aquatic → Marine	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.76%
Sediment	Environmental → Aquatic → Sediment	1.68%
Soil	Environmental → Terrestrial → Soil	67.23%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.04%
Ice	Environmental → Aquatic → Freshwater → Ice	0.84%
Lake	Environmental → Aquatic → Freshwater → Lake	5.04%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Sand	Environmental → Terrestrial → Soil → Sand	4.20%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.24%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.68%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.24%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.20%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.04%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.84%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.20%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.36%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.20%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.84%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_CLC_01252930	2124908041	Soil	MSRCTGDNVRHALSLLKQGSNPAATVYDSIGPDFFLALDDGWLNLGLWEGDGSDPAEAPVAV
INPhiseqgaiiFebDRAFT_1010618572	3300000364	Soil	MSSWTKENLKHTAGLLKQGRNPAATVYDSIGPDFFLALAPGWLNLGLWEGPGDPEEAPAAARR
JGI10213J12805_111279782	3300000858	Soil	VTRHGWTRANLRHVLAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPSEAPVAV
JGI10214J12806_100614453	3300000891	Soil	MSPPIQPHPKAGWTRDNLRHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAV
C688J18823_103673712	3300001686	Soil	MGGGVTTANLRHAVGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPTAVRR
C687J26634_103327861	3300002123	Soil	VAPTGWTRANLRHALAFFRQGRNPATAVYDSIGPDFFLALAPGWLNLGLWEGKGDEDEAPVAV
Ga0055466_100002491	3300003997	Natural And Restored Wetlands	VGSVVWTRENLRHALSVLRYGRNPAATVYDSLGTDFFAALAPGWLNLGLWEGDGADSDEAPVAVRRLVETIARELPIG
Ga0055433_100106661	3300004025	Natural And Restored Wetlands	MRITAHNLRHAAGMLRFGGNPAATVYDSIGSDFFLALDDGWLNLGLWDGDGSDPAEAPLAVR
Ga0063356_1038483202	3300004463	Arabidopsis Thaliana Rhizosphere	VAGWTRSNVRHALGVLRQGSNPAAAVYDSLGPDFFLALEPGWLNLGLWEGDGSDPAEAPRAVRRLVRTLAEDLPANG
Ga0062592_1002340581	3300004480	Soil	MPVEWTRENLRHAIGMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPEEAPVAVRRLVERLAADLPAGGD
Ga0062592_1010634371	3300004480	Soil	MPPLWTKANVRHAAAMLRYGTNPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPDEALVAVRR
Ga0062591_1004681481	3300004643	Soil	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAEAAVRRL
Ga0062591_1020681881	3300004643	Soil	MAPTTWTRENVRHAMSLLRYDRHPAATVYDSLGTEFFLALAPGWLNLGLWEGDGSDPDEAPVAVR
Ga0062381_102899892	3300004808	Wetland Sediment	MAGGDVSDDRSTPTWTRARLRHAASMLRHGRNPAATVYDSLGDDFPFALAPGWLNLGLWEGDGSDPAEAPLAVRRLVETI
Ga0062594_1015961181	3300005093	Soil	MGRVDVVTRAGWTSENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWDGDGTDPSEAAAAVRRLVGTIA
Ga0062594_1029986301	3300005093	Soil	VRAGWTREKLRHALAMLRYGSNPAATVYDSIGPDFFLALAPGWLNLGLWEGDGSDPAEAA
Ga0062594_1030720251	3300005093	Soil	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEA
Ga0068993_100335101	3300005183	Natural And Restored Wetlands	VTKAGWTRENLRHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWDGDGSDPAEA
Ga0066676_104899822	3300005186	Soil	LVRTRWTSENLRHAVGVLRYGRNPAATVYDSIGDDFFLALAPGWLNLGLWDGDGTDPAGALVAP
Ga0070670_1011292351	3300005331	Switchgrass Rhizosphere	MARLTIDNLRHAAGMLRFGRNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPV
Ga0070677_107534582	3300005333	Miscanthus Rhizosphere	VTRAGWTRENLKHGAAMFRYGSHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDP
Ga0070667_1004160842	3300005367	Switchgrass Rhizosphere	VTRAGWTRENLKHGAAMFRYGSHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAI
Ga0070703_102628812	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLKLGLWEGDGSDPSEAEAAVRR
Ga0070713_1020827161	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLVTTANLRHAAGMLRFGHNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGGDPSEAGAAVRRLVT
Ga0070705_1006824621	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSSWTKENLKHTVGLLKQGRNPAATVYDSIGPDFFLALAPGWLNLGLWEGPGDPEEAPAAARRLVATIAAELPKHA
Ga0070700_1006389902	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VTRAGWTRENLKHGAAMLRYGPHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAIAVRRLVETIADALPK
Ga0070694_1013813272	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTRAGWTRENLKHGAAMFRYGSHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGS
Ga0070662_1004939872	3300005457	Corn Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAEAAVRRLVT
Ga0070685_108145282	3300005466	Switchgrass Rhizosphere	MAGWTSENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWDGDGTDPSEAAAAVRRLVGTIASALPHGA
Ga0070693_1007951252	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAVAAVRRLVTRMAHDLPRGG
Ga0070704_1020183661	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAPTSWTRENVRHAASLFRYDRHPAATVYDSLGTEFFLALAPGWLNLGLWEGDGSDPD
Ga0066705_106043521	3300005569	Soil	MTGWTRENLKHAVALLRQGSNPAATVYDSIGADFFLAPAPGWLNLGLWEGDGDAEEAPVAVRRLVETIAAELPTGGT
Ga0068859_1005666191	3300005617	Switchgrass Rhizosphere	MGRITIDNLRHAAGMLRFGHNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPVAVRRLVARMAA
Ga0068864_1014091012	3300005618	Switchgrass Rhizosphere	VTRAGWTRENLKHGAAMFRYGSHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAIAVR
Ga0075282_10058131	3300005896	Rice Paddy Soil	MGRVDAVTKAGWTRQHLRHGAHMLRYGPHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEA
Ga0075417_104310061	3300006049	Populus Rhizosphere	MTRTGWTGANLRHVASMLRYGSNPAATVYDSIGSDFFLALAPGWLNLGLWEGDGSDPTEAPIAVRRLVEEVA
Ga0075428_1010188921	3300006844	Populus Rhizosphere	VPAAWTRANVRHVLAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPSEAPIAVRRLVERIAAA
Ga0075431_1009516161	3300006847	Populus Rhizosphere	MTRAGWTGANLRHVASMLRYGSNPAATVYDSIGSDFFLALAPGWLNLGLWEGDGGDPTEAPIAVRRLVEEVARPLPLGG
Ga0079218_130830162	3300007004	Agricultural Soil	VTRHGWTRANLRHVLAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPSEAPVAVRRLV
Ga0102851_111902471	3300009091	Freshwater Wetlands	MTQSWTRENVRHAMSVLRYGSNPAATVYDSLGPDFFLALAPGWLNLGLWEGDGSDPDEAPVAVRRLVESLADPLPR
Ga0105082_10691552	3300009814	Groundwater Sand	MTRSGLTRQNVRHAASLLWQGRNPAARVYDSIGPSFFLALDDGWLNLGLWEGDGSDASEAPRAVRRLVSTLAE
Ga0105062_11317031	3300009817	Groundwater Sand	MGAGVTRENIRHAVAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPE
Ga0105068_10471541	3300009836	Groundwater Sand	LTRENLRYAASLVWQGRNPAARVYDSIGPDFFLALDEGWLNLGLWEGDGTDPSEAPRAV
Ga0126304_108756772	3300010037	Serpentine Soil	MAGTWTAANVRHALGAFRYGRTPAATVYDSLGDDFFLALAPGWLNLGLWEGDGTDPPEAPLAV
Ga0136847_121848451	3300010391	Freshwater Sediment	MERTTWTRANVRHAVSMFRYGRHPAATVYDSIGDHFFLALAPGWLNLGLWEGDGSDPAEAPIAVRRLVEKLA
Ga0134121_121986942	3300010401	Terrestrial Soil	MASWTKENLKHTVGLLKQGRNPAATVYDSIGPDFFLALAPGWLNLGLWEGPGDPQEAPAAARRLVA
Ga0134123_133659281	3300010403	Terrestrial Soil	VVVVTKAGWTRENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAVAVRRLVETIAEGLPHGVD
Ga0164299_106645941	3300012958	Soil	MRSLVTTANLRHAAGMLRFGHNPAATVYDSIGSEFFLALDDGWLKLGLWEGDGGDPSEAGAAVRRL
Ga0164305_105092712	3300012989	Soil	MNGVTTANLRHAIGMFRFGRNPAATVYDSIGSEFFLALDDGWLNLGLWEGDGSDPSEAGAAVRRLVTRMAHDL
Ga0075309_10011275	3300014268	Natural And Restored Wetlands	VGSVAWTRENLRHALSVLRYGRNPAATVYDSLGTDFFAALAPGWLNLGLWEGDGADSDEAPVAVRRLVETIARELPIG
Ga0075322_11304991	3300014311	Natural And Restored Wetlands	VDAVTKAGWTRQHLRHGAHMLRYGPHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAPAAVLVCVGGTATVDG
Ga0075342_10558332	3300014320	Natural And Restored Wetlands	VASTGWTRENVRHALSVLRHGRNPAATVYDSIGADFVVALAPGWLNLGLWEGDGSDPEEA
Ga0157377_108116872	3300014745	Miscanthus Rhizosphere	MGGIVTTANLRHALGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAV
Ga0157379_103008281	3300014968	Switchgrass Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAVTAVRRLVTRMAHDLPTGGDVL
Ga0157379_117048571	3300014968	Switchgrass Rhizosphere	MGRITIDNLRHAAGMLRFGHNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAP
Ga0167651_10280761	3300015190	Glacier Forefield Soil	MTASWTLENLRHAIGMLRYGRRPAATVYDSIGEDFFLALAPGWLNLGLWEGDGSDAAEAVDAPR
Ga0167647_10494062	3300015199	Glacier Forefield Soil	MTASWTLENLRHAIGMLRYGRRPAATVYDSIGEDFFLALAPGWLNLGLWEGDGSDAAE
Ga0173478_103374031	3300015201	Soil	MARLTIDNLRHAAGMLRFGRNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPDEAPV
Ga0134085_101532151	3300015359	Grasslands Soil	MTRSGLTRQNVRHAASLLWQGRNPAARVYDSIGTEFFLALDEGWLNLGLWEGDGTDPSEAPR
Ga0132255_1017186022	3300015374	Arabidopsis Rhizosphere	MGRVDLVTRAGWTSENVRHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGTDPAEAAVAV
Ga0183260_110168901	3300017787	Polar Desert Sand	LTTANVRHVGAMLRQGRNPAATVYDSIGSDFFLEPAPGWLNFGLWEGPGDPAEAPHAVRR
Ga0163161_109916081	3300017792	Switchgrass Rhizosphere	VTRAGWTRENLKHGAAMFRYGSHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAIAVRRLVETIAEEERG
Ga0190266_107432271	3300017965	Soil	VRAGWTRENLRHALAMLRYGSNPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDRDEAPVAVRRLVERIA
Ga0184604_101179561	3300018000	Groundwater Sediment	MGAGWTRENLRHAIAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPGEAP
Ga0187788_101168603	3300018032	Tropical Peatland	MGTGWTRENLRHAAGMVRYGRNPAATVYESLGTDFVLALAPGWLNLGLWEGDGTDPAEAPVAVRRLVETLASSL
Ga0187774_113417851	3300018089	Tropical Peatland	VVGTGWTRENLRHAAGMFRYGRNPTATVYESLGTDFVLALAPGWLNLGLWEGDGSDPAEAPVA
Ga0190270_119118541	3300018469	Soil	MAPTSWTRENVRHAVSLFRYDRHPAATVYDSLGTEFFLALAPGWLNLGLWEGDGSDPDEAPVAVRR
Ga0190270_127462573	3300018469	Soil	MAGGRLVPAAWTRANLRHAGAMLRYHANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPTEAP
Ga0190271_109626142	3300018481	Soil	MPPTSWTRENVRHAVSLLRYDRHPAATVYDSLGTEFFLALAPGWLNLGLWEGDGSDP
Ga0190267_110132852	3300019767	Soil	VRPSWTRQNVRHALSVARYGQNPAATVYDSLGSDFFLALAPGWLNLGLWEGDGSDPDEA
Ga0193695_10817452	3300021418	Soil	MGRGWTRENLRHVLGMLRYGRNPAATVYDSIGDDFFLALAPGWLNLGLWEGDGCDPREASLAVR
Ga0222622_113533491	3300022756	Groundwater Sediment	MGRPPGTVHAMGSVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGGDPSEAGSAVRRLVTRM
Ga0196962_100386621	3300024430	Soil	MAQRWTLENAKHAFALVRQGRNPAAAVYDSIGPNFVLALDEGWLNLGLWEGDGSDPSEAPVAVRRLVGEIAQHLP
Ga0209640_108947051	3300025324	Soil	VGVVDAPTWTRERIRHALSLLRYGRNQAATVYESIGPDFFLALDEGWLNLGLWEGDGSDDAEAPRAVRRLVETLASDLP
Ga0210083_10051803	3300025521	Natural And Restored Wetlands	MRITAHNLRHAAGMLRFGGNPAATVYDSIGSDFFLALDDGWLNLGLWDGDGSDPAEAPLAVRR
Ga0210061_10028101	3300025537	Natural And Restored Wetlands	VGSVVWTRENLRHALSVLRYGRNPAATVYDSLGTDFFAALAPGWLNLGLWEGDGADSD
Ga0207692_101931691	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLVTTANLRHAAGMLRFGHNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGGDPSEAGAAVRRLVTRMAE
Ga0207685_104502272	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MVGVTTANLRHAAGMLRFGHNPAATVYDSIGPDFFLALDDGWLNLGLWDGDGTDPAEAATAVRRLVTRMAHDLPTGGDV
Ga0207684_111918121	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSGWTRDNLRHALSMLHYGRNPAATVYESIGPDFFLALAPGWLNLGLWEGDGRDPAEAPV
Ga0207687_119553811	3300025927	Miscanthus Rhizosphere	MGRITIDNLRHAAGMLRFGHNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPVAVRRLVARMAADLPRDGDI
Ga0207706_115970232	3300025933	Corn Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAEAAVRRLVTRLAHDLPA
Ga0207658_106790761	3300025986	Switchgrass Rhizosphere	VTRAGWTRENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAI
Ga0208415_10290021	3300025993	Rice Paddy Soil	MGRVDAVTKAGWTRQHLRHGAHMLRYGPHPAATVYDSIGEDFFIALAPGWLNLGLWEGDG
Ga0208530_10216931	3300026009	Rice Paddy Soil	MGRVDAVTKAGWTRQHLRHGAHMLRYGPHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSD
Ga0208422_10345692	3300026053	Natural And Restored Wetlands	VASTGWTRENVRHALSVLRHGRNPAATVYDSIGADFVVALAPGWLNLGLWEGDGSDPEEAPV
Ga0207698_112137892	3300026142	Corn Rhizosphere	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAEAAVRRLVTRMAHDLPT
Ga0209152_104791382	3300026325	Soil	MASWTKENLKHTVGLLKQGRNPAATVYDSIGPDFFLALAPGWLNLGLWEGPGDPEEAPAAARRLVETIA
Ga0209842_10715992	3300027379	Groundwater Sand	MGAGVTRENIRHAVAMLRYGANPAATVYDSIGPDFFLALAPGWLNLGLWEGDGGDPEEAPVAVRRLVE
Ga0256868_100192224	3300027811	Soil	VSPKGWTRANLRHALAFFRQGRNPAATVYESIGPDFFLALAPGWLNLGLWEGKGDEDEAPVAVRRLVET
Ga0268265_116492431	3300028380	Switchgrass Rhizosphere	VRAGWTRENLRHALAMLRYGSNPAATVYDSIGPDFFLALEPGWLNLGLWEGDGSDPAEAAVAVRRLV
Ga0247828_109364681	3300028587	Soil	MGGVTTANLRHAIGMLRFGRNPAATVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAEAAVRRLVTRMAHDLP
Ga0307288_101053681	3300028778	Soil	MAPTSWTRENVRHAVSLFRYDRHPAATVYDSLGSEFFLALAPGGLNLGLWEGDGSDPDEAPVAV
Ga0307323_103543121	3300028787	Soil	VTKAGWTRENLRHGAAMLRYGRHPAATVYDSIGDDFFLALAPGWLNLGLWEGDGRDPAEAPVA
Ga0247824_101620602	3300028809	Soil	MAPTWTRENVRHAVSLFRYDRHPAATVYDSLGTEFFLALAPGWLNLGLWEGDGSDPDEAPVAVRRLVERLASELPIGGD
Ga0307289_102191492	3300028875	Soil	MHGVTTANLRHAAGMLRFGRNPAATVYDSIGADFFLALDDGWLNLGLWEGDGTDPGEPAVAVRRLVTRMAGDLPA
Ga0307286_101066921	3300028876	Soil	MARITIDNLRHAAGMLRFGHNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPVAVRRLVRRM
Ga0307278_100521661	3300028878	Soil	VTGVNRTTWTRQNARHALSVLRYGSNPAATVYDSLGTDFFLALAPGWLNLGLWEGDGRDPDEAPAA
Ga0307304_104039971	3300028885	Soil	MAPTSWTRENVRHAVSLFRYDRHPAATVYDSLGSEFFLALAPGWLNLGLWEGDGSDPDEA
Ga0307304_104165522	3300028885	Soil	VAGWTRSNLRHALGVLRQGSNPAAAVYDSLGPDFFLALEPGWLNLGLWEGDGSDPAEAPQAVRRL
Ga0299907_101498531	3300030006	Soil	MGDVRWTRERLVHAASMLRFGRNPAATVYRSIGTDFFLAISPGWLNLGLWEGDGSDPSEAGIAPRRLVERLAADLPRG
Ga0307499_101245372	3300031184	Soil	VTRAGWTRENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWEGDGSDPAEAAVAV
Ga0299914_106237553	3300031228	Soil	MTRWTRQNLRHVVGVLRQGRNPVATVYDSIGTDFFLAMAPGWLNLGLWEGAGTEEEAPVAVRRLVAALAEELPAGGTVLDV
Ga0299913_113782172	3300031229	Soil	MARWTAAHLRHAVSALRYGGNPASRVYDSIGADFFLALDPGWLNLGLWEGDGSDPEEAPVAVRRLVE
Ga0307505_103909362	3300031455	Soil	VTKAGWTRENLKHGAAMLRYGRHPAATVYDSIGEDFFIALAPGWLNLGLWDGDGTDPAEA
Ga0315290_102595552	3300031834	Sediment	MPAMEPTWTLAHLRHAASMLRHGRNPAATVYDSLSDDFPFALAPGWLNLGLWEGDGGDPAEAPLAVRRLVET
Ga0310893_106038381	3300031892	Soil	MARITIDNIRHAAGMLRFGHNPAAAVYDSIGSDFFLALDDGWLNLGLWEGDGSDPSEAPVAVRRLVVRMAAD
Ga0307406_110123041	3300031901	Rhizosphere	MANRWTAANVRHALGTFRYGQVPAATVYDSIGDDFFLALAPGWLNLGLWEGDGSDASEALIAVRRL
Ga0214473_103139084	3300031949	Soil	MERTTWTRENVRHAVSMLRYGRHPAATVYDSIGDHFFLALAPGWLNLGLWDGDGSDAAEASI
Ga0214473_107158721	3300031949	Soil	MTKTWTREHLKHAARLVKQGRNPAAAVYDSIGPDFFLALDEGWLNLGLWEGDGSDPA
Ga0315283_104310281	3300032164	Sediment	MEPAARPHTGVTRENLRHAGAMLRYGRRPAATVYDSIGPDFFLALDDGWLNLGLWEGDGSDPAEAPAAVRRLVARLATALPT
Ga0315287_117765282	3300032397	Sediment	MEPAARPHTGVTRENLRHAGAMLRYGRRPAATVYDSIGPDFFLALDDGWLNLGLWEGDGSDP
Ga0315275_113840921	3300032401	Sediment	MARITTDNLRHAAGMLRFGGNPAATVYDSIGPDFFLALDDGWLNLGLWEGDGSDPSEAPVAVRRLVTRM
Ga0315273_117008152	3300032516	Sediment	MGNASWTPENLRHMASMLRYGRRPAATVYDSIGEDFFLALAPGWLNLGLWEGDGSDPAEAPVAVRRLVETLAGALPEGD
Ga0214472_102393701	3300033407	Soil	MRAVGRVCDAGAMATWTRGHLRHALGVLRQGRNPAATVYDSIGPDFFLALDEGWLNLGLWEGDGSDPA
Ga0316622_1013288471	3300033416	Soil	MTQSWTRENVRHAMSVLRYGSNPAATVYDSLGPDFFLALAPGWLNLGLWEGDGSDPDEAPVAVRRLVES
Ga0214471_107449261	3300033417	Soil	VGVVDAPTWTRERIRHALSLLRYGRNQAATVYDSIGPEFFLALDEGWLNLGLWEGDGSDE
Ga0364926_029719_3_197	3300033812	Sediment	MSERQWTPQRVRHAISTLRYGRNPAATVYESLGTDFVLALAPGWLNLGLWGGDGSDPTEALEAPR
Ga0370498_056085_2_208	3300034155	Untreated Peat Soil	VDAVTKAGWTRDNLRHGAAMLHYGRHPAATVYDSIGEDFFIALAPGWLNLGLWDGDGSDPAEAPVAVRR
Ga0364940_0151647_2_184	3300034164	Sediment	MSERQWTPQRVRHAISTLRYGRNPAATVYESLGTDFVLALAPGWLNLGLWEGDGSDPTEA