Metagenome / Metatranscriptome Family F074516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074516
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	90 residues
Representative Sequence	MTFGLSLAIVSAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAVTVVGYVSSDGNKLIAVSITPDR
Number of Associated Samples	88
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.13 %
% of genes near scaffold ends (potentially truncated)	34.45 %
% of genes from short scaffolds (< 2000 bps)	73.95 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.874 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (43.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.378 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.28% β-sheet: 43.02% Coil/Unstructured: 40.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00528	BPD_transp_1	17.65
PF07995	GSDH	12.61
PF00582	Usp	2.52
PF13662	Toprim_4	1.68
PF13458	Peripla_BP_6	1.68
PF01638	HxlR	1.68
PF00884	Sulfatase	1.68
PF00743	FMO-like	0.84
PF13557	Phenol_MetA_deg	0.84
PF09471	Peptidase_M64	0.84
PF01266	DAO	0.84
PF14026	DUF4242	0.84
PF01548	DEDD_Tnp_IS110	0.84
PF08241	Methyltransf_11	0.84
PF13424	TPR_12	0.84
PF13189	Cytidylate_kin2	0.84
PF02538	Hydantoinase_B	0.84
PF04392	ABC_sub_bind	0.84
PF00496	SBP_bac_5	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	12.61
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.68
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.84
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.87 %
Unclassified	root	N/A	15.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.97 %
Unclassified	root	N/A	15.13 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18.49 %
Unclassified	root	N/A	15.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	18.49 %
Unclassified	root	N/A	15.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.36 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.52 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.84 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	18.49 %
Unclassified	root	N/A	15.13 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.84 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.84 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.84 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.84 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.84 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	18.49 %
Unclassified	root	N/A	15.13 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.84 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.84 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.84 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.84 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	18.49 %
Unclassified	root	N/A	15.13 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	0.84 %
Desulfobacca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca	0.84 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.84 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.84 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	18.49 %
Unclassified	root	N/A	15.13 %
Reyranella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	0.84 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	0.84 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.84 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.84 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_118723298	Not Available	780	Open in IMG/M
3300004267\|Ga0066396_10113720	Not Available	513	Open in IMG/M
3300004281\|Ga0066397_10082347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300004281\|Ga0066397_10108629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300004281\|Ga0066397_10151893	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300004629\|Ga0008092_11170310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	578	Open in IMG/M
3300004633\|Ga0066395_10011835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3253	Open in IMG/M
3300004633\|Ga0066395_10469975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	720	Open in IMG/M
3300005294\|Ga0065705_10415690	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005332\|Ga0066388_100055665	All Organisms → cellular organisms → Bacteria	4125	Open in IMG/M
3300005332\|Ga0066388_102357741	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300005332\|Ga0066388_103584612	Not Available	792	Open in IMG/M
3300005406\|Ga0070703_10313217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	658	Open in IMG/M
3300005434\|Ga0070709_10184879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300005436\|Ga0070713_101847492	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005468\|Ga0070707_101919889	Not Available	559	Open in IMG/M
3300005536\|Ga0070697_101069898	Not Available	718	Open in IMG/M
3300005549\|Ga0070704_102110868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	524	Open in IMG/M
3300005713\|Ga0066905_100070045	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300005713\|Ga0066905_100874250	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005764\|Ga0066903_101688420	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005843\|Ga0068860_101156886	Not Available	794	Open in IMG/M
3300005937\|Ga0081455_10433148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	903	Open in IMG/M
3300005937\|Ga0081455_10700829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300005983\|Ga0081540_1030973	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300006852\|Ga0075433_11331030	Not Available	622	Open in IMG/M
3300006854\|Ga0075425_100044534	All Organisms → cellular organisms → Bacteria	4959	Open in IMG/M
3300006914\|Ga0075436_100715494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	742	Open in IMG/M
3300007265\|Ga0099794_10397019	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	720	Open in IMG/M
3300009090\|Ga0099827_10307813	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300009101\|Ga0105247_11052042	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009553\|Ga0105249_12020107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	649	Open in IMG/M
3300009792\|Ga0126374_10389777	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300009792\|Ga0126374_10626720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	798	Open in IMG/M
3300009792\|Ga0126374_10872046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	695	Open in IMG/M
3300009792\|Ga0126374_11388089	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009792\|Ga0126374_11478189	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010043\|Ga0126380_11811525	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010046\|Ga0126384_10005415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7791	Open in IMG/M
3300010046\|Ga0126384_10123808	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300010046\|Ga0126384_11925845	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010048\|Ga0126373_11882521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	661	Open in IMG/M
3300010358\|Ga0126370_10684337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	899	Open in IMG/M
3300010358\|Ga0126370_11857617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	585	Open in IMG/M
3300010360\|Ga0126372_10009436	All Organisms → cellular organisms → Bacteria	5095	Open in IMG/M
3300010360\|Ga0126372_10371493	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300010360\|Ga0126372_10780202	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010360\|Ga0126372_11486421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	713	Open in IMG/M
3300010361\|Ga0126378_11078974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	904	Open in IMG/M
3300010362\|Ga0126377_10249116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1729	Open in IMG/M
3300010362\|Ga0126377_10586139	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300010362\|Ga0126377_10863832	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300010362\|Ga0126377_11861878	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300010366\|Ga0126379_10116695	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300010376\|Ga0126381_102605929	Not Available	724	Open in IMG/M
3300010376\|Ga0126381_104197298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300010397\|Ga0134124_10526873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300010398\|Ga0126383_10689679	Not Available	1099	Open in IMG/M
3300010398\|Ga0126383_13108111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	542	Open in IMG/M
3300011270\|Ga0137391_10252611	All Organisms → cellular organisms → Bacteria → Proteobacteria	1528	Open in IMG/M
3300012189\|Ga0137388_11588816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300012202\|Ga0137363_10000543	All Organisms → cellular organisms → Bacteria	21050	Open in IMG/M
3300012202\|Ga0137363_10000849	All Organisms → cellular organisms → Bacteria → Proteobacteria	17112	Open in IMG/M
3300012204\|Ga0137374_10025538	All Organisms → cellular organisms → Bacteria	6587	Open in IMG/M
3300012207\|Ga0137381_10152759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	1987	Open in IMG/M
3300012209\|Ga0137379_10097738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	2825	Open in IMG/M
3300012350\|Ga0137372_10170793	Not Available	1761	Open in IMG/M
3300012350\|Ga0137372_10180419	Not Available	1704	Open in IMG/M
3300012353\|Ga0137367_10085098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2336	Open in IMG/M
3300012354\|Ga0137366_10028136	All Organisms → cellular organisms → Bacteria	4368	Open in IMG/M
3300012355\|Ga0137369_10009698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9530	Open in IMG/M
3300012358\|Ga0137368_10037761	All Organisms → cellular organisms → Bacteria	4263	Open in IMG/M
3300012362\|Ga0137361_11954868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300012532\|Ga0137373_10006054	All Organisms → cellular organisms → Bacteria	12988	Open in IMG/M
3300012923\|Ga0137359_10538587	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1028	Open in IMG/M
3300012927\|Ga0137416_10755584	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012929\|Ga0137404_10022305	Not Available	4586	Open in IMG/M
3300012929\|Ga0137404_10099381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2344	Open in IMG/M
3300012929\|Ga0137404_10267015	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1474	Open in IMG/M
3300012930\|Ga0137407_10000359	All Organisms → cellular organisms → Bacteria → Proteobacteria	32487	Open in IMG/M
3300012944\|Ga0137410_11082150	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012971\|Ga0126369_10115618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2460	Open in IMG/M
3300014326\|Ga0157380_12091139	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300015245\|Ga0137409_11181712	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300015371\|Ga0132258_10204304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4794	Open in IMG/M
3300015372\|Ga0132256_100066930	All Organisms → cellular organisms → Bacteria	3393	Open in IMG/M
3300016319\|Ga0182033_11122279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300016404\|Ga0182037_10011552	All Organisms → cellular organisms → Bacteria → Proteobacteria	5137	Open in IMG/M
3300021560\|Ga0126371_10854157	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300021560\|Ga0126371_12688677	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300025906\|Ga0207699_10847599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	673	Open in IMG/M
3300025910\|Ga0207684_10496223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300025940\|Ga0207691_11440149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	565	Open in IMG/M
3300025941\|Ga0207711_10834261	Not Available	858	Open in IMG/M
3300025961\|Ga0207712_11352535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300026377\|Ga0257171_1024440	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300027527\|Ga0209684_1003207	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300027646\|Ga0209466_1001855	All Organisms → cellular organisms → Bacteria → Proteobacteria	4292	Open in IMG/M
3300027646\|Ga0209466_1037998	Not Available	980	Open in IMG/M
3300027654\|Ga0209799_1005218	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300027654\|Ga0209799_1014269	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300027874\|Ga0209465_10085216	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300027882\|Ga0209590_10866394	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300028878\|Ga0307278_10536681	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031231\|Ga0170824_121582611	Not Available	896	Open in IMG/M
3300031469\|Ga0170819_16019352	Not Available	634	Open in IMG/M
3300031474\|Ga0170818_101388764	Not Available	697	Open in IMG/M
3300031543\|Ga0318516_10170144	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300031544\|Ga0318534_10045832	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300031720\|Ga0307469_10318856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300031720\|Ga0307469_11704083	Not Available	607	Open in IMG/M
3300031795\|Ga0318557_10576668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300031798\|Ga0318523_10147933	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300031833\|Ga0310917_10927448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300032067\|Ga0318524_10154904	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300032174\|Ga0307470_10531932	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300033432\|Ga0326729_1005346	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300033433\|Ga0326726_10018995	All Organisms → cellular organisms → Bacteria	5979	Open in IMG/M
3300033433\|Ga0326726_10086519	All Organisms → cellular organisms → Bacteria	2784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.39%
Host-Associated	Host-Associated	12.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.39%
Plants	Host-Associated → Plants	12.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Peat	Environmental → Terrestrial → Peat	2.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.03%
Loam	Environmental → Terrestrial → Soil → Loam	21.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1187232982	3300000956	Soil	MTKVARVVVALSLSLALVSAATAQELRSFHGRVLFIAATTMGFAPDSGSSFEVDLTQIAQSAYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0066396_101137201	3300004267	Tropical Forest Soil	MTLGLFLAIASAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSIAPDR*
Ga0066397_100823472	3300004281	Tropical Forest Soil	MAPMTLPRRAIVTVGLALAMVCAAMAQEYQSYHGRVLWISGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0066397_101086291	3300004281	Tropical Forest Soil	MTFGLCLAIVSAGMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAVTVVGYVSSDGNKLIAVSITPDR*
Ga0066397_101518931	3300004281	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEFLNNGQAITVVGYVSADGNKLIAVSITPDR*
Ga0008092_111703102	3300004629	Tropical Rainforest Soil	MTVGLLLAIVSAAMAQELQSYHGRVLWLSGNAMGFAPDSGSSFEVDLTRLDQSAYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0066395_100118353	3300004633	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEFLTNGQAITVVGYVSADGNKLIAVSITPDR*
Ga0066395_104699752	3300004633	Tropical Forest Soil	VRRVSRGATAVTLVLALALAAAAQELRSYHGRVLFVAGNAMGCAPDDGSSFEVDLTEVDQSSYEFLVNGDRVTVVGYVSRDGNKLIAVSITKDQY*
Ga0065705_104156901	3300005294	Switchgrass Rhizosphere	MKRVARVAVCVGLSLVIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQLDQSTYEFLNNGDAVTVVGYVSRDGNKLIA
Ga0066388_1000556653	3300005332	Tropical Forest Soil	VRRVSRGATAVTLVLALALAAAAQELRSYHGRVLFVAGNAMGFAPDDGSSFEVDLTEVDQSSYEFLVNGDRVTVVGYVSRDGNKLIAVSITKDQY*
Ga0066388_1023577412	3300005332	Tropical Forest Soil	MARHYERVRSLSRIAMTVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0066388_1035846122	3300005332	Tropical Forest Soil	LAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSAYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0070703_103132172	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	AMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR*
Ga0070709_101848792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR*
Ga0070713_1018474922	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVS
Ga0070707_1019198891	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVAVSLSLALVSAATAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSITVVGYVSRDGNKVIAVSIT
Ga0070697_1010698982	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LTGARLAVHDGLMLRVARVVVAVSLSLALVSAATAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0070704_1021108682	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	CVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR*
Ga0066905_1000700453	3300005713	Tropical Forest Soil	MAPMTRPRRAIVTVGLSLAMVCAAMAQELQTYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0066905_1008742501	3300005713	Tropical Forest Soil	MTFGLALAIVSAAMAQEFQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0066903_1016884201	3300005764	Tropical Forest Soil	MTVGLLLAIISAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLI
Ga0068860_1011568862	3300005843	Switchgrass Rhizosphere	GAAAHYELMKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR*
Ga0081455_104331481	3300005937	Tabebuia Heterophylla Rhizosphere	MAVTLVLFLAFAAATQELRSFHGRVLFVAGTAMGFAPDSGGSFEVDLTQVAQSSYEFLNNGDSVTVVGYVAREGNKVIAVSITPDR*
Ga0081455_107008291	3300005937	Tabebuia Heterophylla Rhizosphere	MAFGLSLAIVSAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSIRPDR*
Ga0081540_10309732	3300005983	Tabebuia Heterophylla Rhizosphere	MTFGLSLAIVSAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAVTVVGYVSSDGNKLIAVSITPDR*
Ga0075433_113310301	3300006852	Populus Rhizosphere	MGLMTKVARVVVALSLSLALVSAVTAQELRSFHGRVLFIAATTMGFAPDSGGSFEVDLTQIAQSAYEFLNNGDSITVVGY
Ga0075425_1000445345	3300006854	Populus Rhizosphere	MTFGLSLALISAAMAQELQRYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGDKLIAVSITPDQ*
Ga0075436_1007154941	3300006914	Populus Rhizosphere	TARHYGRVRALSRVVMTFGLSLALISAAMAQELQRYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGDKLIAVSITPDQ*
Ga0099794_103970191	3300007265	Vadose Zone Soil	MRNSGWATKTKKAIRPVVVAITLSLPLVCAAIAQDLVSFHGRVLFVAGASMGFAPDSGGSFEVDLTRIPQSAYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0099827_103078132	3300009090	Vadose Zone Soil	MTRVAPVLVAVSLSLALVYPAAAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQIAQSSYEFLNNGDSVTLVGYVSRDGNKVIAVSITPDQ*
Ga0105247_110520422	3300009101	Switchgrass Rhizosphere	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQLDQSTYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR*
Ga0105249_120201072	3300009553	Switchgrass Rhizosphere	VARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR*
Ga0126374_103897772	3300009792	Tropical Forest Soil	MRRALYIIPAAVLLLGLVCGALAQELRSFHGRVLWVSGTTMGFAPDEGGSFDIDLTRTDQTQYMFLKSGDAVTILGVVSPDGNKVIALGIRLDRYYLGG*
Ga0126374_106267202	3300009792	Tropical Forest Soil	MTLGLSLAIASAAMAQDLQTYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSIAPDR*
Ga0126374_108720461	3300009792	Tropical Forest Soil	MTFGLSLAIVSAAMTQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQSITVVGYVSSDGNKLIAVSITPDR*
Ga0126374_113880891	3300009792	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSAYEFLTNGQAITVVGYVSADGNKLIAVSITPDR*
Ga0126374_114781892	3300009792	Tropical Forest Soil	MTFGLSLIIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAVTVVGYVSSDGNKLIAVSITPDR*
Ga0126380_118115251	3300010043	Tropical Forest Soil	MTLPRRAIVTVGLALAMVCAAMAQEYQSYHGRVLWISGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126384_100054158	3300010046	Tropical Forest Soil	VSRGAAAVTLVLALALATAAQELRSYHGRVLFVAGNAMGFAPDDGGSFEVDLTQVDQSSYEFLVNGDSVTVVGYVSRDGNKVIAVSITKDQY*
Ga0126384_101238082	3300010046	Tropical Forest Soil	MTFGLALVIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126384_119258452	3300010046	Tropical Forest Soil	MTVGLLLAIVSAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAISITPDR*
Ga0126373_118825212	3300010048	Tropical Forest Soil	MILGLSLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126370_106843372	3300010358	Tropical Forest Soil	MTVGLLLAIISAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126370_118576172	3300010358	Tropical Forest Soil	VSRGAAAVTLVLALALATAAQELRSYHGRVLFVAGNAMGFAPDDGSSFEVDLTEVDQSSYEFLVNGDRVTVVGYVSRDGNKLIAVSITKDQY*
Ga0126372_100094363	3300010360	Tropical Forest Soil	VRRVPRGATAVTLVLALALAAAAQELRSYHGRVLFVAGNAMGFAPDDGSSFEVDLTEVDQSSYEFLVNGDRVTVVGYVSRDGNKLIAVSITKDQY*
Ga0126372_103714931	3300010360	Tropical Forest Soil	SYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEFLNNGQAITVVGYVSADGNKLIAVSITPDR*
Ga0126372_107802022	3300010360	Tropical Forest Soil	MTVGLALAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLI
Ga0126372_114864211	3300010360	Tropical Forest Soil	VGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126378_110789742	3300010361	Tropical Forest Soil	MTVGLLLAIISAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAISITPDR*
Ga0126377_102491163	3300010362	Tropical Forest Soil	MAVTLVLFLAFAAAAQQLWSFHGRVLFVAGTAMGFAPDSGGSFEVDLTRVDQRSYEFLNNGDSVTVVGYVSGEGNKVIAVSITPDQ*
Ga0126377_105861391	3300010362	Tropical Forest Soil	LAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126377_108638322	3300010362	Tropical Forest Soil	MTFGLCLAIVAAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126377_118618782	3300010362	Tropical Forest Soil	MTFGLSLIIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126379_101166952	3300010366	Tropical Forest Soil	MTFGLSLVIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126381_1026059291	3300010376	Tropical Forest Soil	SAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126381_1041972982	3300010376	Tropical Forest Soil	GLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEFLNNGQAITVVGYVSADGNKLIAVSITPDR*
Ga0134124_105268732	3300010397	Terrestrial Soil	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR*
Ga0126383_106896792	3300010398	Tropical Forest Soil	SAAMAQEFQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR*
Ga0126383_131081112	3300010398	Tropical Forest Soil	VLALALAAAAQELRSYHGRVLFVAGNAMGFAPDDGGSFEVDLTEVDQTSYEFLVNGDGVTVVGYVSRDGNKVIAVSITKDQY*
Ga0137391_102526112	3300011270	Vadose Zone Soil	MTRVARVVVAVSLLLALVCAAPAQELLSFHGRVLFITGTTMSFAPDSGSSFKVDLIQVDQSSYQFLKSGDSITVVGYVSSDGQKVIAVSITPDQ*
Ga0137388_115888162	3300012189	Vadose Zone Soil	MTRVARVVVAVSLLLALVCAAPAQELLSFHGRVLFITGTTMSFAPDSGSSFKVDLIQVDQSSYQFLKSGDSITVVGYVSSDGQKVIAVSITPDQ
Ga0137363_1000054310	3300012202	Vadose Zone Soil	MTRVGRVVVVVSLSLALVCAATAQDLVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTKVDQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0137363_1000084910	3300012202	Vadose Zone Soil	VVAVSLLLALVCAAPAQELLSFHGRVLFITGTTMSFAPDSGSSFKVDLIQVDQSSYQFLKSGDSITVVGYVSSDGQKVIAVSITPDQ*
Ga0137374_100255382	3300012204	Vadose Zone Soil	MRNSGWATKAKKAIGPVLVVISLSLPLVCAATAQELLSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVDQSSYQFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137381_101527593	3300012207	Vadose Zone Soil	MTRVARVVVAIGLSLTVVCAATAQELVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137379_100977383	3300012209	Vadose Zone Soil	MTRVARVVVAIGLSLTLVCAATAQELVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137372_101707933	3300012350	Vadose Zone Soil	MTRVTVARVVVAIGLSLTLVCAATAQELVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRIDQSSYEFLNNGDSVTVVGYVSRDGNKVIAVS
Ga0137372_101804192	3300012350	Vadose Zone Soil	RRLAAHDPLMTRVARVVVAIGLSLTVVCAATAQELVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137367_100850982	3300012353	Vadose Zone Soil	MPTMKNSGWATKAKKAIRPVVVAISLSLPLVCAATAQELLSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVDQSSYQFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137366_100281365	3300012354	Vadose Zone Soil	QELVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137369_100096988	3300012355	Vadose Zone Soil	MPTMRNSGWATKAKKAIGPVLVVISLSLPLVCAATAQELLSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVDQSSYQFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137368_100377614	3300012358	Vadose Zone Soil	MPTMRNSGWATKAKKAIRPVLVVISLSLPLVCAATAQELLSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVDQSSYQFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137361_119548682	3300012362	Vadose Zone Soil	MTRVARVVVAVSLLLALVCAAPAQELLSFHGRVLFITGTTMSFAPDSGSSFKVDLIQVDQSSYQFLKSGDSITVVGYVSSDGQKVIAVSITPD
Ga0137373_100060542	3300012532	Vadose Zone Soil	MRNSGWATKAKKAIRPVLVVISLSLPLVCAATAQELLSFHGRVLFVAGTTMGFAPDSGSSFEVDLTRVDQSSYQFLNNGDSVTVVGYVSRDGNKVIAVSITPDQ*
Ga0137359_105385871	3300012923	Vadose Zone Soil	MTRVGRVVVVVSLWLALVCAATAQDLVSFHGRVLFVSGTTMGFAPDSGSSFEVDLTKVDQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0137416_107555841	3300012927	Vadose Zone Soil	MNSVGRALMTISLSLVLVCAAMAQELRSYHGRVLYVAGTSMGFAPDDGSSFEVDLTQVDQTQYQFLKSGDAVTVVGVVTRDGQKLIAVSITPDR*
Ga0137404_100223051	3300012929	Vadose Zone Soil	MRAVWVVVAVSLSLALVCAATAQELLSFHGRVLFITGTTMSFAPDSGSSFKVDLTQVAQSSYQFLKSGDSITVVGYVSRDGQKVIGVSITPDQ*
Ga0137404_100993811	3300012929	Vadose Zone Soil	MTRVARVVVAVSLLLALVSAATAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0137404_102670151	3300012929	Vadose Zone Soil	GAHLAAHDGLMTRVGRVVVVVSLSLALVCAATAQDLVSFHGRVLFVAGTTMGFAPDSGSSFEVDLTKVDQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ*
Ga0137407_1000035915	3300012930	Vadose Zone Soil	MTRVARIVVAVSLLLALVCAATAQELLSFHGRVLFIAGTTMGFAPDSGSSFEVDLTQVAQSSYDFLNNGDSVTVVGYVSRDGNKVIATSITPDQ*
Ga0137410_110821502	3300012944	Vadose Zone Soil	MNSVGRALMTISLSLVLVCAAMAQELRSYHGRVLYVAGTSMGFAPDDGSSFEVDLTQVDQTQYQFLKSGDAVTVVGVVTRDGG*
Ga0126369_101156183	3300012971	Tropical Forest Soil	MTLGLCLAIASAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSIAPDR*
Ga0157380_120911391	3300014326	Switchgrass Rhizosphere	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSI
Ga0137409_111817122	3300015245	Vadose Zone Soil	MNSVGRALMTISLSLVLVCAAMAQELRSYHGRVLYVAGTSMGFAPDDGSSFEVDLTQVDQTQYQFLKSGDAVTVVGVVTRDGQKLIAVS
Ga0132258_102043046	3300015371	Arabidopsis Rhizosphere	MALMTRTRRAIVTVGLSLAMVCAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDVTRVDQSSYEFLTNGQAITVVGYVSSDGSKLIAVSITPDQ*
Ga0132256_1000669305	3300015372	Arabidopsis Rhizosphere	MALMTRTRRAIVTVGLSLAMVCAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDVTRVDQSSYEFLTNGQAITVVGYISSDGSKLIAVSITPDQ*
Ga0182033_111222791	3300016319	Soil	PARRIARLDVAPTARHYERVRSLSRSAITVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0182037_100115522	3300016404	Soil	MTVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0126371_108541572	3300021560	Tropical Forest Soil	MTVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSAYEFLTNGQAITVVGYVSADGNKLIAVSISPDR
Ga0126371_126886772	3300021560	Tropical Forest Soil	MTFGLSLIIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR
Ga0207699_108475992	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR
Ga0207684_104962233	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VVAVSLSLALVSAATAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ
Ga0207691_114401492	3300025940	Miscanthus Rhizosphere	IIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR
Ga0207711_108342612	3300025941	Switchgrass Rhizosphere	RVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR
Ga0207712_113525351	3300025961	Switchgrass Rhizosphere	ACVEGGAAAHYELMKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDAVTVVGYVSRDGNKLIAVSITPDR
Ga0257171_10244403	3300026377	Soil	MPTMRNSGWATKTKKAIRPVVVAITLSLPLVCAAIAQDLVSFHGRVLFVAGASMGFAPDSGGSFEVDLTKVPQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ
Ga0209684_10032073	3300027527	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSAYEFLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0209466_10018554	3300027646	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRLDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR
Ga0209466_10379982	3300027646	Tropical Forest Soil	APRARHYERVRTLRRVAMTFGLCLAIVSAGMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAVTVVGYVSSDGNKLIAVSITPDR
Ga0209799_10052183	3300027654	Tropical Forest Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEFLNNGQAITVVGYVSADGNKLIAVSITPDR
Ga0209799_10142692	3300027654	Tropical Forest Soil	MTFGLALVIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR
Ga0209465_100852162	3300027874	Tropical Forest Soil	LRRVAMTFGLSLIIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSSYEFLTNGQAITVVGYVSSDGNKLIAVSITPDR
Ga0209590_108663941	3300027882	Vadose Zone Soil	MTRVAPVLVAVSLSLALVYPAAAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQIAQSSYEFLNNGDSVTLVGYVSRDG
Ga0307278_105366812	3300028878	Soil	MKRVGRALMTISLSLALVCAAMAQELRTYHGRVLYVAGTSMGFAPDIGSSFEVDLTRVDQTQYQFLKNGDAVTVVG
Ga0170824_1215826111	3300031231	Forest Soil	MALMTRTRRAIVTVGLSLAMVCAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDVTRVDQSSYEFLTNGQAITVVGYVSSDGSKLIAVSITPDQ
Ga0170819_160193521	3300031469	Forest Soil	LMTPTRLAIVTVGLSLAMVCAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDVTRVDQSSYEFLTNGQAITVVGYVSSDGSKLIAVSITPDQ
Ga0170818_1013887642	3300031474	Forest Soil	MTLMTRTRRAIVTVGLSLAMVCAAMAQELQSYHGRVLWVSGNAMGFAPDSGSSFEVDVTRVDQSSYEFLTNGQAITVVGYVSSDGSKLIAVSITPDQ
Ga0318516_101701441	3300031543	Soil	LLAIISAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0318534_100458323	3300031544	Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0307469_103188562	3300031720	Hardwood Forest Soil	MKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR
Ga0307469_117040831	3300031720	Hardwood Forest Soil	MTRVARVVVAVSLSLALVSAATAQELLSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSITVVGYVSRDGNKVIAVSITPDQ
Ga0318557_105766682	3300031795	Soil	HYERVRSLSRSAITVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0318523_101479331	3300031798	Soil	ITVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0310917_109274481	3300031833	Soil	RRARPNPARRIARLDVAPTARHYERVRSLSRSAITVGLLLAIVSAAMAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLTRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0318524_101549041	3300032067	Soil	MAQELQSYHGRVLWMSGNAMGFAPDSGSSFEVDLNRVDQSAYEVLTNGQAITVVGYVSADGNKLIAVSITPDR
Ga0307470_105319322	3300032174	Hardwood Forest Soil	VEAEPAAHYELMKRVARVAVCVGLSLIIIGAAMAQELRSYHGRVLFISGNSMGFAPDAGSSFEVDLTQMDQSSYEFLNNGDVVTVVGYVSRDGNKLIAVSITPDR
Ga0326729_10053463	3300033432	Peat Soil	VLAVSLLLALVCAAGAQELRSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVAITPDQ
Ga0326726_1001899512	3300033433	Peat Soil	MTKVGRVVLAVSLLLALVCAAAAQELRSFHGRVLFIAGTNMGFAPDSGSSFEVDLTQVAQSSYEFLNNGDSVTVVGYVSRDGNKVIAVAITPDQ
Ga0326726_100865193	3300033433	Peat Soil	MTISLSLALVCAALAQGVRSFHGRVLYIAGNSMGFAPDIGGSFDVDLTQVDQTSYAFLKSGDAVTVVGVVTPDGNKLIAVSITPDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences