Metagenome / Metatranscriptome Family F074511

Basic Information
Family ID	F074511
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	75 residues
Representative Sequence	VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVPGTSTAAFAFSY
Number of Associated Samples	107
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.46 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	95.80 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.227 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.244 % of family members)
Environment Ontology (ENVO)	Unclassified (32.773 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.218 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108 1F47_09020050 2JGI10216J12902_1146875271 3A2065W1_100836682 4C688J35102_1207697361 5Ga0062595_1026841591 6Ga0066395_104897592 7Ga0066678_110076372 8Ga0070658_110893882 9Ga0070683_1018659631 10Ga0070683_1022706641 11Ga0070674_1010326891 12Ga0070673_1014827332 13Ga0070713_1021500352 14Ga0070708_1021792591 15Ga0070663_1017435591 16Ga0070681_111757402 17Ga0068867_1019675062 18Ga0070707_1023118942 19Ga0070741_104326213 20Ga0070684_1008372511 21Ga0070731_104397901 22Ga0070695_1015509392 23Ga0070693_1015849232 24Ga0068852_1021138151 25Ga0081539_101806462 26Ga0070717_110739612 27Ga0075425_1019208201 28Ga0105240_102864681 29Ga0105240_120374801 30Ga0066709_1022735182 31Ga0066709_1023940541 32Ga0066709_1034396831 33Ga0105241_105054111 34Ga0105237_110292112 35Ga0105238_111961601 36Ga0126308_103830552 37Ga0126382_122729672 38Ga0126306_117758532 39Ga0126372_121044521 40Ga0134125_124347372 41Ga0105239_136004822 42Ga0134126_106650293 43Ga0134121_130905192 44Ga0137776_16215191 45Ga0120152_10161313 46Ga0137378_114208241 47Ga0137384_105638132 48Ga0137385_116730771 49Ga0157338_10614232 50Ga0164298_113568742 51Ga0164303_100567881 52Ga0164303_101845602 53Ga0126369_105535792 54Ga0164306_101389973 55Ga0164306_104692081 56Ga0164306_117560982 57Ga0157369_112945162 58Ga0157369_125643031 59Ga0157374_101962921 60Ga0182021_128147551 61Ga0132258_114822651 62Ga0132257_1034759361 63Ga0182039_109449021 64Ga0187777_111548432 65Ga0206356_116669582 66Ga0194041_102421662 67Ga0193699_102641871 68Ga0224712_104070402 69Ga0247664_11053992 70Ga0247692_10838741 71Ga0179589_104828242 72Ga0207707_102723331 73Ga0207693_108132972 74Ga0207660_101657231 75Ga0207657_104435161 76Ga0207657_114030392 77Ga0207652_103360491 78Ga0207652_108391121 79Ga0207652_109380092 80Ga0207694_115942051 81Ga0207650_104706482 82Ga0207644_108691642 83Ga0207711_103518931 84Ga0207661_103797672 85Ga0207667_112698551 86Ga0207640_112233771 87Ga0207640_116047332 88Ga0207648_113480912 89Ga0209177_101121672 90Ga0265334_100993222 91Ga0307315_101616302 92Ga0307504_104265292 93Ga0307284_104258862 94Ga0265338_103580502 95Ga0311338_114240851 96Ga0311349_110095811 97Ga0247826_102888702 98Ga0265328_103481602 99Ga0265339_100555744 100Ga0265316_103062941 101Ga0265313_100457394 102Ga0307374_104451442 103Ga0311351_107505852 104Ga0318493_100898281 105Ga0318500_107344892 106Ga0302321_1033087811 107Ga0318501_107317561 108Ga0318492_103959882 109Ga0318548_103276592 110Ga0318568_102170711 111Ga0307413_109674431 112Ga0318517_104333702 113Ga0318495_102259022 114Ga0307411_106954052 115Ga0308173_103361991 116Ga0307415_1000516091 117Ga0335071_105537852 118Ga0335076_102404621 119Ga0372946_0034802_1_237
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108 1F47_09020050 2JGI10216J12902_1146875271 3A2065W1_100836682 4C688J35102_1207697361 5Ga0062595_1026841591 6Ga0066395_104897592 7Ga0066678_110076372 8Ga0070683_1022706641 9Ga0070674_1010326891 10Ga0070673_1014827332 11Ga0070713_1021500352 12Ga0070708_1021792591 13Ga0070663_1017435591 14Ga0068867_1019675062 15Ga0070707_1023118942 16Ga0070731_104397901 17Ga0070695_1015509392 18Ga0070693_1015849232 19Ga0105240_120374801 20Ga0066709_1022735182 21Ga0126308_103830552 22Ga0126306_117758532 23Ga0126372_121044521 24Ga0137776_16215191 25Ga0120152_10161313 26Ga0164303_101845602 27Ga0157369_125643031 28Ga0182021_128147551 29Ga0194041_102421662 30Ga0207657_104435161 31Ga0207652_103360491 32Ga0307504_104265292 33Ga0311338_114240851 34Ga0247826_102888702 35Ga0307374_104451442 36Ga0318500_107344892 37Ga0302321_1033087811
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1Ga0070681_111757402 2F47_09020050 3JGI10216J12902_1146875271 4A2065W1_100836682 5Ga0062595_1026841591 6Ga0066678_110076372 7Ga0070658_110893882 8Ga0070674_1010326891 9Ga0070713_1021500352 10Ga0070708_1021792591 11Ga0070741_104326213 12Ga0070731_104397901 13Ga0070695_1015509392 14Ga0081539_101806462 15Ga0075425_1019208201 16Ga0105240_120374801 17Ga0066709_1022735182 18Ga0066709_1023940541 19Ga0066709_1034396831 20Ga0105237_110292112 21Ga0126308_103830552 22Ga0126382_122729672 23Ga0126306_117758532 24Ga0126372_121044521 25Ga0134125_124347372 26Ga0137776_16215191 27Ga0120152_10161313 28Ga0137384_105638132 29Ga0137385_116730771 30Ga0157338_10614232 31Ga0164303_101845602 32Ga0164306_101389973 33Ga0164306_104692081 34Ga0164306_117560982 35Ga0157369_112945162 36Ga0157369_125643031 37Ga0182021_128147551 38Ga0132258_114822651 39Ga0132257_1034759361 40Ga0187777_111548432 41Ga0194041_102421662 42Ga0247664_11053992 43Ga0247692_10838741 44Ga0179589_104828242 45Ga0207707_102723331 46Ga0207657_104435161 47Ga0207652_103360491 48Ga0207640_116047332 49Ga0209177_101121672 50Ga0265334_100993222 51Ga0307504_104265292 52Ga0307284_104258862 53Ga0311338_114240851 54Ga0311349_110095811 55Ga0307374_104451442 56Ga0302321_1033087811 57Ga0318492_103959882 58Ga0318517_104333702 59Ga0307415_1000516091 60Ga0335071_105537852 61Ga0335076_102404621 62Ga0372946_0034802_1_237
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.81% β-sheet: 31.13% Coil/Unstructured: 49.06%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
c.72.1.0: automated matches	d5eyna_	5eyn	0.77043
c.72.1.1: Ribokinase-like	d2v78a_	2v78	0.76653
c.72.1.0: automated matches	d3vasa_	3vas	0.7586
c.72.1.1: Ribokinase-like	d5c40a1	5c40	0.74868
c.72.1.0: automated matches	d3pl2a_	3pl2	0.74807

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02133	Transp_cyt_pur	22.69
PF00694	Aconitase_C	7.56
PF13520	AA_permease_2	2.52
PF00202	Aminotran_3	1.68
PF00294	PfkB	0.84
PF00420	Oxidored_q2	0.84
PF02592	Vut_1	0.84
PF04545	Sigma70_r4	0.84
PF04075	F420H2_quin_red	0.84
PF05067	Mn_catalase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.84
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.84

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.77 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	32.77 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.77 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.57 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.49 %
Unclassified	root	N/A	67.23 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.68 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.84 %
Unclassified	root	N/A	67.23 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.45 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.84 %
Unclassified	root	N/A	67.23 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.84 %
Unclassified	root	N/A	67.23 %

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01BJSEF	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300000956\|JGI10216J12902_114687527	Not Available	521	Open in IMG/M
3300001537\|A2065W1_10083668	Not Available	674	Open in IMG/M
3300002568\|C688J35102_120769736	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300004479\|Ga0062595_102684159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300004633\|Ga0066395_10489759	Not Available	707	Open in IMG/M
3300005181\|Ga0066678_11007637	Not Available	540	Open in IMG/M
3300005327\|Ga0070658_11089388	Not Available	695	Open in IMG/M
3300005329\|Ga0070683_101865963	Not Available	578	Open in IMG/M
3300005329\|Ga0070683_102270664	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.23%
Host-Associated	Host-Associated	32.77%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.68%
Plants	Host-Associated → Plants	32.77%
Terrestrial	Environmental → Terrestrial	65.55%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Peat	Environmental → Terrestrial → Peat	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.37%
Soil	Environmental → Terrestrial → Soil	62.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Lake	Environmental → Aquatic → Freshwater → Lake	0.84%
Loam	Environmental → Terrestrial → Soil → Loam	15.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.52%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.52%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.36%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M

Showing 1 to 10 of 107 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_09020050	2170459009	Grass Soil	VIALLGNLSRDYLPGQPARVGGGAFHGARALQRLRVPARVVARCALVDRDELLPPLVALGSPVRYVP
JGI10216J12902_1146875271	3300000956	Soil	VIALVGNLSQDILPGRPPRVGGGPYHGARGLHRLRVPARIVVRCAVADRDRLLPQLVALGTPVRYVPGERTATFGIDYDGD
A2065W1_100836682	3300001537	Permafrost	VIALIGNLSRDELPGHPPRVGGGSYHGARALHRLRVPARVVARCAVADRELLPVSYTHLTLPTNRE
C688J35102_1207697361	3300002568	Soil	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARAAASDRDTLLPPLVRLGTPVRFVAGESTATFAFSYTGD
Ga0062595_1026841591	3300004479	Soil	VIALIGNLARDRLPGRPPHVGGGSYHGARALHRLRVPARIVARCAVADRELLLPPVVRLGTPVSYVPGECTAAF
Ga0066395_104897592	3300004633	Tropical Forest Soil	VIALIGNLSRDLLPGQPPRAGGGPFHGARALRRLRVPARIFGRAAPEDRDSLFPPVVRLGTPARFVQGEATATF
Ga0066678_110076372	3300005181	Soil	VIALLGNLSRDLKPGLPPLAGGGPYHGARALRRLRVPARIVTRCALADRDVLLPPLVRLGTPVRYIAGAQTATFE
Ga0070658_110893882	3300005327	Corn Rhizosphere	VIALIGNLSLDLLPGAAPRIGGGSYHGARALQRLRVPARVVARCAEADRGTLLPPLVRLGTPVRFVPGQSTATFAFSYVGDR
Ga0070683_1018659631	3300005329	Corn Rhizosphere	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASGDRDRLLPPLVRLGTPVRFVPGESTATFEFSYNGD
Ga0070683_1022706641	3300005329	Corn Rhizosphere	VIALIGNLSLDALPGAAPRIGGGSYHGARALQRLRVPARVVARCATVDRDKLLPPLVRLGTP
Ga0070674_1010326891	3300005356	Miscanthus Rhizosphere	VIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDV
Ga0070673_1014827332	3300005364	Switchgrass Rhizosphere	MSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISYN
Ga0070713_1021500352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIALLGNLSRDYLPGRPPRVGGGAYHGARALHRLRVPARVVARCAAADRDVLLPPLIRLGSPVRYVPGASTATFTMSYRGDVREMHVDAI
Ga0070708_1021792591	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VIALLGNLARDLLPGRPPRVGGGPYHGARALRRLRTPALIVARCAVEDREELFSPVVRLGSTARFVA
Ga0070663_1017435591	3300005455	Corn Rhizosphere	VISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIADKALLLPPLVRLGTPVRYVPGASTTTFAFHYEGDRRIM
Ga0070681_111757402	3300005458	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVPGTSTAAFAFSY
Ga0068867_1019675062	3300005459	Miscanthus Rhizosphere	MIGLLGNLSQDLLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLVRLGTPVRYVPGTS
Ga0070707_1023118942	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIALIGNLSRDLRPGRPPLAGGGPYHGARALQRLRVPARVIARCAEEDRTALLPPLIRLG
Ga0070741_104326213	3300005529	Surface Soil	VIALLGNLARDLLPGSPPRVGGGPFHGARALQRLRVPARVVARCAEADRETLLPPLVRLG
Ga0070684_1008372511	3300005535	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTAAFAFSYDGDRR
Ga0070731_104397901	3300005538	Surface Soil	VIALLGNLCRDVFPDRPPATGGGPYHGARALQLLRVPARIITRCAPDDRDELLPPLVRLGTPVRLIPG
Ga0070695_1015509392	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VIALLGNLTRDVFPNRPSHVGGGPYHAARALQRLPVQARIYARCAVEDREELVLPVVRLGTGVQYV
Ga0070693_1015849232	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VIGLLGNLSQDVMPGSAPRVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVAGASTASFAFSYDGDRRTMSM
Ga0068852_1021138151	3300005616	Corn Rhizosphere	VIALIGNLSLDLLPGAAPRIGGGSYHGARALQRLRVPARVVARCAEADRGTLLPPLVRLGTPVRFVPGQSTATFAFSYV
Ga0081539_101806462	3300005985	Tabebuia Heterophylla Rhizosphere	VIALVGNLSRDYRPGQPPRAGGGPFHGARALHRLRVPARIYARCALEDRDELLPAVVRLGTPVRYVAGEATATFAFDYD
Ga0070717_110739612	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISY
Ga0075425_1019208201	3300006854	Populus Rhizosphere	VIALFGNLSRDLRPGQPPKAGGGPFHGARALQHVHVPARIFARAAEADRLALLPSLVKLGTPARFVSGEA
Ga0105240_102864681	3300009093	Corn Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFA
Ga0105240_120374801	3300009093	Corn Rhizosphere	VIALIGNLSRDVLPGAAPRVGGGSYHGARALHRLRVAARVVARCSVDDKAQLLPPLIRLGTPVRYVDGTTTATFAFSYDGDRREMRV
Ga0066709_1022735182	3300009137	Grasslands Soil	VIALVGNLSRDLIPGQQPRVGGGPFHGARALHRLRVPARIVARCAAHEREQLVPAVARLGTPVR
Ga0066709_1023940541	3300009137	Grasslands Soil	VIALIGNLSRDLLPGQPPRVGGGPYHSARALQRLRVPARIYARAAEEDRAELLPAVVRLGTPTRFVPGSATATFAFSYDGD
Ga0066709_1034396831	3300009137	Grasslands Soil	VIALLGNLSRDLKPGLPPLAGGGPFHGARALRRLRVPARIVTRCAVADCDALLPPLVRLGTPVRYVSGEHTATFG
Ga0105241_105054111	3300009174	Corn Rhizosphere	MIGLLGNLSQDLLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLVRLGTPVRYV
Ga0105237_110292112	3300009545	Corn Rhizosphere	VIALLGNLSVDLLPGVPPRVGGGSYHGARALQRLRVPARIVARCAGDDRTALLPELVRLGTPVRYVGGSSTATFSFSYDGD
Ga0105238_111961601	3300009551	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPQVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTAAFAFSYDGDRRWMTVD
Ga0126308_103830552	3300010040	Serpentine Soil	VIALVGNLSRDVLPGKPPRVGGGPYHGARALHRLRVPARVVARCAAADRDALVRPVVRLGTPVRFVASQTTAEFRIDYDGDSRR
Ga0126382_122729672	3300010047	Tropical Forest Soil	VIALIGNLSRDLLPGQAPRAGGGPFHGARALRRLRVPARIFGRAAGEDRAALFPPVVRLGTPSRFVEGTATATFSFSY
Ga0126306_117758532	3300010166	Serpentine Soil	VQGWRAVIALLGHLSRDLLPGEEPRVGGGAFHGARALHHLGAPARVYARCAEADRAELLPQVVRLGTPVV
Ga0126372_121044521	3300010360	Tropical Forest Soil	VIALVGNLSRDVFPDGAPRAGGGAYHGARALRRLRVPARVITRCATIDRDELLPPLVRQGTPVTCLRGATT
Ga0134125_124347372	3300010371	Terrestrial Soil	VISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIADKALLLPPLVRLGTPVRYVPGASTTTFAFHYEGDRRIMRIEA
Ga0105239_136004822	3300010375	Corn Rhizosphere	VIALLGNLSRDFLPGRPPHVGGGAYHGARALQRLRVPARIITRCATADRAALLPPIVRLGTPVRYVAGE
Ga0134126_106650293	3300010396	Terrestrial Soil	VISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIPDKALLLPPLVRPGTPERYVPRA
Ga0134121_130905192	3300010401	Terrestrial Soil	VIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDVRTMHIE
Ga0137776_16215191	3300010937	Sediment	VIALIGNLSCDIFPGRRPRVGGGAYHGARALRELRVEAQVITRCAAAERETLLPPLVRLGTPVQWIR
Ga0120152_10161313	3300012011	Permafrost	VIALIGNLSRDLVHGGPPSAGGGPFHGARALQRLRVPARIVARCAVADRDVLMAPVVRLGTPGRYVTGEPTAPVSF
Ga0137378_114208241	3300012210	Vadose Zone Soil	VIALIGNLSRDLLPGAAPRVGGGSYHGARALQRLRVPARIVARCAAADRATLVPPVIRLGPPVRYVPGEATA
Ga0137384_105638132	3300012357	Vadose Zone Soil	VIALIGNLSRDLLPGRPPRIGGGPFHGARALQRLRVPARILARCAASDRDALLPGLIRLGTPVRYVRGD
Ga0137385_116730771	3300012359	Vadose Zone Soil	VIALIGNLSRDLKPGHPPLVGGGPYHGARALQRLRVPARIVARCAAADRELLLPPLVRLGTP
Ga0157338_10614232	3300012515	Arabidopsis Rhizosphere	VIALIGNLSLDVLPDAAPRVGGGSYHGARALQRLRVPARVVARCAASDRDRLLPPLVRLGTPVRFVAGTSTAT
Ga0164298_113568742	3300012955	Soil	MSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATF
Ga0164303_100567881	3300012957	Soil	VIALIGNLSRDLLPGRPPQTGGGPFHGARALQRLRVPARVFARCADADRAALLPPLVRLGTPVR
Ga0164303_101845602	3300012957	Soil	VIALIGNLSRDDIPGHPPSVGGGPYHGARALRRLRVPARIVARCAVADKESLLPQLVRLGTPVRYVAGTTTPTFSFSYVGDRR
Ga0126369_105535792	3300012971	Tropical Forest Soil	VIALVGNLSRDVFPDGAPRAGGGAYHGARALRRLRVPARVITRCATTDRDELLPPLVRQG
Ga0164306_101389973	3300012988	Soil	VIALIGNLSRDLRPGAEPAAGGGPYHGARALRRLRVPARIVVRCAVADRDALLPSLIRLGTPVRYVAGEQTASF*
Ga0164306_104692081	3300012988	Soil	MSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISYNGDA
Ga0164306_117560982	3300012988	Soil	VIALIGNLSRDLLPGRPPRAGGGPFHAARALQRLRVPARLIARCAEADREALFPPLVRLGTPARYVRGEATATFSFSYDGDVRT
Ga0157369_112945162	3300013105	Corn Rhizosphere	VIALVGNLSRDLLPGEPPRVGGGSFHGARALQRLRVPARIVARCAGADRDSLLPPVVRLGTPVRFVQGKSTATFSFSYDGDRRTMH
Ga0157369_125643031	3300013105	Corn Rhizosphere	VISLVGNLSLDLEPTPHVGGGPFHGARALNRLRVPARIVARCATADKALLLPPLVSLGTP
Ga0157374_101962921	3300013296	Miscanthus Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFS
Ga0182021_128147551	3300014502	Fen	VRPRVGAAQGDTRKRVIALLGNLCRDVFPDRPPATGGGPYYGARALQRLRVPARIVTRCAPADRAELLPPLVRLGTPVRCISGR
Ga0132258_114822651	3300015371	Arabidopsis Rhizosphere	VIALFGNLARDLLPGQAPRVGGGAFHGARALHHLRVPSCVYARCAEADRAELLPPVVRLGTPVV
Ga0132257_1034759361	3300015373	Arabidopsis Rhizosphere	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCAIQDRDALMPHLVRLGTPVRFVPGEATATFAFSYNGDRREM
Ga0182039_109449021	3300016422	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGA
Ga0187777_111548432	3300017974	Tropical Peatland	MIALVGNFSLDHLPGLPPKVGGGVYHGARALQRLRVPARIAARCAEEDRARLVPPLARLGTPVRYVPGT
Ga0206356_116669582	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VIALVGNLSRDLLPGQPPRVGGGSFHGARALQRLRVPARIVARCAGADRDSLLPPVVRLGTPVRFVQGKS
Ga0194041_102421662	3300021340	Anoxic Zone Freshwater	VISLLGNLSRDFIPGEPQRVGGGPFHAARALRRLRVEARIFTRCATVDRDALLPPLVALGTPVTFVPGVSTATFH
Ga0193699_102641871	3300021363	Soil	VIALIGNLSRDLLPGRPPQTGGGPFHGARALQRLRVPARIFARCAEADRAVLFPPLVRLGTPTRYVHGESTNTFSFSYNGDVRTMSID
Ga0224712_104070402	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATADRETLLPPLIRLGTPVRYVPGVSTPAFAF
Ga0247664_11053992	3300024232	Soil	VIALIGNLSCDLLPGQRPRVGGGSFHGARALQRLRVPARVYARCAADDKGTMLPPLVRLGTPVRYVPGSSTATFSFSYDGDVRTMSVD
Ga0247692_10838741	3300024279	Soil	VIALIGNLSRDLLPGRPPQVGGGPFHGARALQRLRVPARVIARCAIEDRETLLPPLVRLGTPARYVNGVSTNTFSFSYEGD
Ga0179589_104828242	3300024288	Vadose Zone Soil	VIALIGNLSRDLSPGRPPRTGGGPFHGARALQRLRVPARIFARCAEADRAVLFPPLVRLGTPTRYVHGESTNTFSFSYNGDVRT
Ga0207707_102723331	3300025912	Corn Rhizosphere	VIALIGNLSRDLRPGRPPLAGGGPYHGARALQRLRVPARVIARCAEEDRTALLPPLIRLGTPTRYVAGESTNTFSFSYDG
Ga0207693_108132972	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDVRTIFVVEM
Ga0207660_101657231	3300025917	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTE
Ga0207657_104435161	3300025919	Corn Rhizosphere	VIALVGNLSRDFVPGKPPQVGGGPYHGARALQRLRVPARIVARCAEADRDVLMPPLVRLGTPVRYVVGTSTPTFSFSYNGERREMRIDAL
Ga0207657_114030392	3300025919	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIIARCATPDRDRLLPPLVRLGTPVRYV
Ga0207652_103360491	3300025921	Corn Rhizosphere	VIALLGNLSRDFLPGRPPHVGGGAYHGARALQRLRVPARIITRCATADRAALLPPVVRLGSPVRYVAGETTATFSISYEG
Ga0207652_108391121	3300025921	Corn Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQRSMTVDAL
Ga0207652_109380092	3300025921	Corn Rhizosphere	VIALLGNLSVDLLPGVPPRVGGGSYHGARALQRLRVPARIVARCAGDDRTALLPELVRLGTPVRYVGGSSTAT
Ga0207694_115942051	3300025924	Corn Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQRSMTVDALG
Ga0207650_104706482	3300025925	Switchgrass Rhizosphere	VIGLLGNLSKDVLPGRPPHVGGGPYHGARALHRLRVPARVVARCATADREQLLPPLVRLGTPVRYVPGTATAAFAFSYEGD
Ga0207644_108691642	3300025931	Switchgrass Rhizosphere	VIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGEST
Ga0207711_103518931	3300025941	Switchgrass Rhizosphere	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCAPSDRDTLLPPLVRLGTPVRYVAGESTATFAFSYNGDRREMRVDALGD
Ga0207661_103797672	3300025944	Corn Rhizosphere	VIALIGNLSRDLRPGRPPLAGGGPFHGARALQRLRVPARVIARCAEEDRTALLPPLIRLGTPTRYVAGESTNTFSFSY
Ga0207667_112698551	3300025949	Corn Rhizosphere	VIGLLGNLSQDVLPGRPPQVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTST
Ga0207640_112233771	3300025981	Corn Rhizosphere	VIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQR
Ga0207640_116047332	3300025981	Corn Rhizosphere	VIGLLGNLSKDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATADRETLLPPLIRLGTPVRYVPGVSTPAFAFTYDG
Ga0207648_113480912	3300026089	Miscanthus Rhizosphere	VIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSY
Ga0209177_101121672	3300027775	Agricultural Soil	VIALVGNLSRDFVPGRPPQVGGGPYHGARALQRLRVPARIVARCAVADREALLPPLVRLGTPVRFVEGSATPTF
Ga0265334_100993222	3300028573	Rhizosphere	VIALIGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAIEDRDALLPPVTRLGTPVRYVPGTATATFSFSYDGDVRT
Ga0307315_101616302	3300028721	Soil	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASSDRDRLLPPLVRLGTPVRFVPGESTATFAFSYNGDRREMR
Ga0307504_104265292	3300028792	Soil	VIALIGNLSLDLLPGGSPRVGGGPFHGARALQRLRVPARVIARCAEQDRDKLLPPLIRLGTPTRYVRGESTAT
Ga0307284_104258862	3300028799	Soil	VIALIGNLSRDLLPEQPPRVGGGPYPGARALQRLRVPARIVARCAADDRDDLLPPVVRLGTPVRFVEGSQTATFSF
Ga0265338_103580502	3300028800	Rhizosphere	VIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTP
Ga0311338_114240851	3300030007	Palsa	VIALLGNLARDLFGGGQARTGGGPFHGARALRQLRVSAEIYARCALADRDALLPPLVSLGSPVHYVPGTATASFEIWEAGAERRMCVL
Ga0311349_110095811	3300030294	Fen	VIALIGNLSRDLLPGTAPRVGGGSYHGARALQRLRVPARIVVRCAVADRDTLVPPVIRLGTPVRYVPGNSTATFSFSYE
Ga0247826_102888702	3300030336	Soil	VIALVGNLSRGGSYHGARALHRLRVPARVVARCAAADRDALMRPLVRLGTPVRFVTSQVTASFRIDYDGDGRRRMTIDALAD
Ga0265328_103481602	3300031239	Rhizosphere	VIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATFSFSYDADVRTMA
Ga0265339_100555744	3300031249	Rhizosphere	VIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATFSFS
Ga0265316_103062941	3300031344	Rhizosphere	VIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYV
Ga0265313_100457394	3300031595	Rhizosphere	VIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATF
Ga0307374_104451442	3300031670	Soil	VIALIGNLSRDLLPARQPHVGGGPYHGARALQRLRVPARIVARCATEDRAALLPAVIALGTPVRYVPGTNTATFSFSYDGDVRTMAIDAL
Ga0311351_107505852	3300031722	Fen	VIALIGNLSRDLLPGTAPRVGGGSYHGARALQRLRVPARIVVRCAVADRETLVPPVIRLGTPVRYVPGN
Ga0318493_100898281	3300031723	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGASTATFTMSYRGDVREMHV
Ga0318500_107344892	3300031724	Soil	VIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRLR
Ga0302321_1033087811	3300031726	Fen	VIALIGNLSRDHLPGKPPRVGGGSYHGARALAGIRVPARIFARCAAVDRDALMPPVIHLGTPVRYVPG
Ga0318501_107317561	3300031736	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADRDALVPPLIRLGSPVR
Ga0318492_103959882	3300031748	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGT
Ga0318548_103276592	3300031793	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYV
Ga0318568_102170711	3300031819	Soil	VIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADRDALVPPLIRLGSPVRYVPGASTATFTMSYRGDVREM
Ga0307413_109674431	3300031824	Rhizosphere	VIALVGNLSRDLLPGKPPRVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFVGAKTTPTFR
Ga0318517_104333702	3300031835	Soil	VIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRLG
Ga0318495_102259022	3300031860	Soil	VIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRL
Ga0307411_106954052	3300032005	Rhizosphere	VIALVGNLSRDLLPGKPPRVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFV
Ga0308173_103361991	3300032074	Soil	VIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASGDRDRLLPPLVRLGTPVRFVAGQSTATFAFSYDG
Ga0307415_1000516091	3300032126	Rhizosphere	VIALVGNLSRDLLPGKPPHVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFVGAKTTPTFRIEYDGDRR
Ga0335071_105537852	3300032897	Soil	MIALVGNLSRDHVPGRPPLVGGGVYHGARALQRLRVPARVVARCAEADRDELVPPLARLGTPARYVPGTSTAT
Ga0335076_102404621	3300032955	Soil	VIALVGNLSCDLFPGRVPRVGGGAYHGARALRHLSMPAQVITRCAAADRSTLLPPLVRLGTPVQWI
Ga0372946_0034802_1_237	3300034384	Soil	VIALIGNLSRDLLPGRPPQAGGGPFHGARALQRLRVPARVIARCAEIDREALLPPLVRLGTPTRYVPGELTNTFSFSYD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074511

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences