NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074511

Metagenome / Metatranscriptome Family F074511

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074511
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 75 residues
Representative Sequence VIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVPGTSTAAFAFSY
Number of Associated Samples 107
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 55.46 %
% of genes near scaffold ends (potentially truncated) 97.48 %
% of genes from short scaffolds (< 2000 bps) 95.80 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (67.227 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.244 % of family members)
Environment Ontology (ENVO) Unclassified
(32.773 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.218 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 19.81%    β-sheet: 31.13%    Coil/Unstructured: 49.06%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.82
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.72.1.0: automated matchesd5eyna_5eyn0.77043
c.72.1.1: Ribokinase-liked2v78a_2v780.76653
c.72.1.0: automated matchesd3vasa_3vas0.7586
c.72.1.1: Ribokinase-liked5c40a15c400.74868
c.72.1.0: automated matchesd3pl2a_3pl20.74807


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF02133Transp_cyt_pur 22.69
PF00694Aconitase_C 7.56
PF13520AA_permease_2 2.52
PF00202Aminotran_3 1.68
PF00294PfkB 0.84
PF00420Oxidored_q2 0.84
PF02592Vut_1 0.84
PF04545Sigma70_r4 0.84
PF04075F420H2_quin_red 0.84
PF05067Mn_catalase 0.84
PF00160Pro_isomerase 0.84
PF00561Abhydrolase_1 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.84
COG1738Queuosine precursor transporter YhhQ, DUF165 familyTranslation, ribosomal structure and biogenesis [J] 0.84
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.23 %
All OrganismsrootAll Organisms32.77 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459009|GA8DASG01BJSEFAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300000956|JGI10216J12902_114687527Not Available521Open in IMG/M
3300001537|A2065W1_10083668Not Available674Open in IMG/M
3300002568|C688J35102_120769736All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300004479|Ga0062595_102684159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia501Open in IMG/M
3300004633|Ga0066395_10489759Not Available707Open in IMG/M
3300005181|Ga0066678_11007637Not Available540Open in IMG/M
3300005327|Ga0070658_11089388Not Available695Open in IMG/M
3300005329|Ga0070683_101865963Not Available578Open in IMG/M
3300005329|Ga0070683_102270664Not Available521Open in IMG/M
3300005356|Ga0070674_101032689Not Available723Open in IMG/M
3300005364|Ga0070673_101482733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia639Open in IMG/M
3300005436|Ga0070713_102150035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300005445|Ga0070708_102179259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300005455|Ga0070663_101743559Not Available557Open in IMG/M
3300005458|Ga0070681_11175740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria689Open in IMG/M
3300005459|Ga0068867_101967506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia552Open in IMG/M
3300005468|Ga0070707_102311894All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005529|Ga0070741_10432621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1203Open in IMG/M
3300005535|Ga0070684_100837251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria861Open in IMG/M
3300005538|Ga0070731_10439790Not Available868Open in IMG/M
3300005545|Ga0070695_101550939Not Available552Open in IMG/M
3300005547|Ga0070693_101584923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia514Open in IMG/M
3300005616|Ga0068852_102113815Not Available585Open in IMG/M
3300005985|Ga0081539_10180646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria990Open in IMG/M
3300006028|Ga0070717_11073961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia733Open in IMG/M
3300006854|Ga0075425_101920820Not Available663Open in IMG/M
3300009093|Ga0105240_10286468Not Available1890Open in IMG/M
3300009093|Ga0105240_12037480Not Available596Open in IMG/M
3300009137|Ga0066709_102273518Not Available745Open in IMG/M
3300009137|Ga0066709_102394054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium718Open in IMG/M
3300009137|Ga0066709_103439683Not Available575Open in IMG/M
3300009174|Ga0105241_10505411Not Available1078Open in IMG/M
3300009545|Ga0105237_11029211Not Available830Open in IMG/M
3300009551|Ga0105238_11196160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium784Open in IMG/M
3300010040|Ga0126308_10383055Not Available936Open in IMG/M
3300010047|Ga0126382_12272967Not Available523Open in IMG/M
3300010166|Ga0126306_11775853Not Available516Open in IMG/M
3300010360|Ga0126372_12104452Not Available612Open in IMG/M
3300010371|Ga0134125_12434737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria569Open in IMG/M
3300010375|Ga0105239_13600482Not Available503Open in IMG/M
3300010396|Ga0134126_10665029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1186Open in IMG/M
3300010401|Ga0134121_13090519Not Available513Open in IMG/M
3300010937|Ga0137776_1621519Not Available1458Open in IMG/M
3300012011|Ga0120152_1016131All Organisms → cellular organisms → Bacteria2959Open in IMG/M
3300012210|Ga0137378_11420824Not Available607Open in IMG/M
3300012357|Ga0137384_10563813Not Available932Open in IMG/M
3300012359|Ga0137385_11673077Not Available500Open in IMG/M
3300012515|Ga0157338_1061423Not Available565Open in IMG/M
3300012955|Ga0164298_11356874Not Available547Open in IMG/M
3300012957|Ga0164303_10056788Not Available1763Open in IMG/M
3300012957|Ga0164303_10184560All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300012971|Ga0126369_10553579Not Available1215Open in IMG/M
3300012988|Ga0164306_10138997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1641Open in IMG/M
3300012988|Ga0164306_10469208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium962Open in IMG/M
3300012988|Ga0164306_11756098Not Available539Open in IMG/M
3300013105|Ga0157369_11294516Not Available743Open in IMG/M
3300013105|Ga0157369_12564303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300013296|Ga0157374_10196292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1975Open in IMG/M
3300014502|Ga0182021_12814755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium584Open in IMG/M
3300015371|Ga0132258_11482265Not Available1714Open in IMG/M
3300015373|Ga0132257_103475936Not Available573Open in IMG/M
3300016422|Ga0182039_10944902Not Available771Open in IMG/M
3300017974|Ga0187777_11154843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300020070|Ga0206356_11666958Not Available629Open in IMG/M
3300021340|Ga0194041_10242166Not Available549Open in IMG/M
3300021363|Ga0193699_10264187Not Available717Open in IMG/M
3300022467|Ga0224712_10407040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300024232|Ga0247664_1105399Not Available654Open in IMG/M
3300024279|Ga0247692_1083874Not Available503Open in IMG/M
3300024288|Ga0179589_10482824Not Available574Open in IMG/M
3300025912|Ga0207707_10272333Not Available1467Open in IMG/M
3300025915|Ga0207693_10813297Not Available720Open in IMG/M
3300025917|Ga0207660_10165723Not Available1708Open in IMG/M
3300025919|Ga0207657_10443516Not Available1019Open in IMG/M
3300025919|Ga0207657_11403039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M
3300025921|Ga0207652_10336049Not Available1364Open in IMG/M
3300025921|Ga0207652_10839112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium814Open in IMG/M
3300025921|Ga0207652_10938009Not Available763Open in IMG/M
3300025924|Ga0207694_11594205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300025925|Ga0207650_10470648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300025931|Ga0207644_10869164Not Available755Open in IMG/M
3300025941|Ga0207711_10351893Not Available1364Open in IMG/M
3300025944|Ga0207661_10379767Not Available1279Open in IMG/M
3300025949|Ga0207667_11269855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium714Open in IMG/M
3300025981|Ga0207640_11223377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium668Open in IMG/M
3300025981|Ga0207640_11604733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300026089|Ga0207648_11348091Not Available670Open in IMG/M
3300027775|Ga0209177_10112167Not Available880Open in IMG/M
3300028573|Ga0265334_10099322Not Available1055Open in IMG/M
3300028721|Ga0307315_10161630Not Available683Open in IMG/M
3300028792|Ga0307504_10426529Not Available527Open in IMG/M
3300028799|Ga0307284_10425886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300028800|Ga0265338_10358050Not Available1047Open in IMG/M
3300030007|Ga0311338_11424085Not Available643Open in IMG/M
3300030294|Ga0311349_11009581Not Available780Open in IMG/M
3300030336|Ga0247826_10288870Not Available1170Open in IMG/M
3300031239|Ga0265328_10348160Not Available577Open in IMG/M
3300031249|Ga0265339_10055574Not Available2147Open in IMG/M
3300031344|Ga0265316_10306294Not Available1156Open in IMG/M
3300031595|Ga0265313_10045739Not Available2129Open in IMG/M
3300031670|Ga0307374_10445144Not Available723Open in IMG/M
3300031722|Ga0311351_10750585Not Available744Open in IMG/M
3300031723|Ga0318493_10089828Not Available1527Open in IMG/M
3300031724|Ga0318500_10734489Not Available504Open in IMG/M
3300031726|Ga0302321_103308781Not Available525Open in IMG/M
3300031736|Ga0318501_10731756Not Available546Open in IMG/M
3300031748|Ga0318492_10395988Not Available726Open in IMG/M
3300031793|Ga0318548_10327659Not Available752Open in IMG/M
3300031819|Ga0318568_10217071Not Available1181Open in IMG/M
3300031824|Ga0307413_10967443Not Available727Open in IMG/M
3300031835|Ga0318517_10433370Not Available593Open in IMG/M
3300031860|Ga0318495_10225902Not Available840Open in IMG/M
3300032005|Ga0307411_10695405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium885Open in IMG/M
3300032074|Ga0308173_10336199Not Available1310Open in IMG/M
3300032126|Ga0307415_100051609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2792Open in IMG/M
3300032897|Ga0335071_10553785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1102Open in IMG/M
3300032955|Ga0335076_10240462Not Available1705Open in IMG/M
3300034384|Ga0372946_0034802All Organisms → cellular organisms → Bacteria2247Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.40%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere8.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere5.04%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.52%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.52%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.52%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.68%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.68%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.84%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.84%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.84%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.84%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.84%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021340Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9mEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F47_090200502170459009Grass SoilVIALLGNLSRDYLPGQPARVGGGAFHGARALQRLRVPARVVARCALVDRDELLPPLVALGSPVRYVP
JGI10216J12902_11468752713300000956SoilVIALVGNLSQDILPGRPPRVGGGPYHGARGLHRLRVPARIVVRCAVADRDRLLPQLVALGTPVRYVPGERTATFGIDYDGD
A2065W1_1008366823300001537PermafrostVIALIGNLSRDELPGHPPRVGGGSYHGARALHRLRVPARVVARCAVADRELLPVSYTHLTLPTNRE
C688J35102_12076973613300002568SoilVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARAAASDRDTLLPPLVRLGTPVRFVAGESTATFAFSYTGD
Ga0062595_10268415913300004479SoilVIALIGNLARDRLPGRPPHVGGGSYHGARALHRLRVPARIVARCAVADRELLLPPVVRLGTPVSYVPGECTAAF
Ga0066395_1048975923300004633Tropical Forest SoilVIALIGNLSRDLLPGQPPRAGGGPFHGARALRRLRVPARIFGRAAPEDRDSLFPPVVRLGTPARFVQGEATATF
Ga0066678_1100763723300005181SoilVIALLGNLSRDLKPGLPPLAGGGPYHGARALRRLRVPARIVTRCALADRDVLLPPLVRLGTPVRYIAGAQTATFE
Ga0070658_1108938823300005327Corn RhizosphereVIALIGNLSLDLLPGAAPRIGGGSYHGARALQRLRVPARVVARCAEADRGTLLPPLVRLGTPVRFVPGQSTATFAFSYVGDR
Ga0070683_10186596313300005329Corn RhizosphereVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASGDRDRLLPPLVRLGTPVRFVPGESTATFEFSYNGD
Ga0070683_10227066413300005329Corn RhizosphereVIALIGNLSLDALPGAAPRIGGGSYHGARALQRLRVPARVVARCATVDRDKLLPPLVRLGTP
Ga0070674_10103268913300005356Miscanthus RhizosphereVIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDV
Ga0070673_10148273323300005364Switchgrass RhizosphereMSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISYN
Ga0070713_10215003523300005436Corn, Switchgrass And Miscanthus RhizosphereVIALLGNLSRDYLPGRPPRVGGGAYHGARALHRLRVPARVVARCAAADRDVLLPPLIRLGSPVRYVPGASTATFTMSYRGDVREMHVDAI
Ga0070708_10217925913300005445Corn, Switchgrass And Miscanthus RhizosphereVIALLGNLARDLLPGRPPRVGGGPYHGARALRRLRTPALIVARCAVEDREELFSPVVRLGSTARFVA
Ga0070663_10174355913300005455Corn RhizosphereVISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIADKALLLPPLVRLGTPVRYVPGASTTTFAFHYEGDRRIM
Ga0070681_1117574023300005458Corn RhizosphereVIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVPGTSTAAFAFSY
Ga0068867_10196750623300005459Miscanthus RhizosphereMIGLLGNLSQDLLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLVRLGTPVRYVPGTS
Ga0070707_10231189423300005468Corn, Switchgrass And Miscanthus RhizosphereVIALIGNLSRDLRPGRPPLAGGGPYHGARALQRLRVPARVIARCAEEDRTALLPPLIRLG
Ga0070741_1043262133300005529Surface SoilVIALLGNLARDLLPGSPPRVGGGPFHGARALQRLRVPARVVARCAEADRETLLPPLVRLG
Ga0070684_10083725113300005535Corn RhizosphereVIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTAAFAFSYDGDRR
Ga0070731_1043979013300005538Surface SoilVIALLGNLCRDVFPDRPPATGGGPYHGARALQLLRVPARIITRCAPDDRDELLPPLVRLGTPVRLIPG
Ga0070695_10155093923300005545Corn, Switchgrass And Miscanthus RhizosphereVIALLGNLTRDVFPNRPSHVGGGPYHAARALQRLPVQARIYARCAVEDREELVLPVVRLGTGVQYV
Ga0070693_10158492323300005547Corn, Switchgrass And Miscanthus RhizosphereVIGLLGNLSQDVMPGSAPRVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVRLGTPVRYVAGASTASFAFSYDGDRRTMSM
Ga0068852_10211381513300005616Corn RhizosphereVIALIGNLSLDLLPGAAPRIGGGSYHGARALQRLRVPARVVARCAEADRGTLLPPLVRLGTPVRFVPGQSTATFAFSYV
Ga0081539_1018064623300005985Tabebuia Heterophylla RhizosphereVIALVGNLSRDYRPGQPPRAGGGPFHGARALHRLRVPARIYARCALEDRDELLPAVVRLGTPVRYVAGEATATFAFDYD
Ga0070717_1107396123300006028Corn, Switchgrass And Miscanthus RhizosphereMSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISY
Ga0075425_10192082013300006854Populus RhizosphereVIALFGNLSRDLRPGQPPKAGGGPFHGARALQHVHVPARIFARAAEADRLALLPSLVKLGTPARFVSGEA
Ga0105240_1028646813300009093Corn RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFA
Ga0105240_1203748013300009093Corn RhizosphereVIALIGNLSRDVLPGAAPRVGGGSYHGARALHRLRVAARVVARCSVDDKAQLLPPLIRLGTPVRYVDGTTTATFAFSYDGDRREMRV
Ga0066709_10227351823300009137Grasslands SoilVIALVGNLSRDLIPGQQPRVGGGPFHGARALHRLRVPARIVARCAAHEREQLVPAVARLGTPVR
Ga0066709_10239405413300009137Grasslands SoilVIALIGNLSRDLLPGQPPRVGGGPYHSARALQRLRVPARIYARAAEEDRAELLPAVVRLGTPTRFVPGSATATFAFSYDGD
Ga0066709_10343968313300009137Grasslands SoilVIALLGNLSRDLKPGLPPLAGGGPFHGARALRRLRVPARIVTRCAVADCDALLPPLVRLGTPVRYVSGEHTATFG
Ga0105241_1050541113300009174Corn RhizosphereMIGLLGNLSQDLLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLVRLGTPVRYV
Ga0105237_1102921123300009545Corn RhizosphereVIALLGNLSVDLLPGVPPRVGGGSYHGARALQRLRVPARIVARCAGDDRTALLPELVRLGTPVRYVGGSSTATFSFSYDGD
Ga0105238_1119616013300009551Corn RhizosphereVIGLLGNLSQDVLPGRPPQVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTAAFAFSYDGDRRWMTVD
Ga0126308_1038305523300010040Serpentine SoilVIALVGNLSRDVLPGKPPRVGGGPYHGARALHRLRVPARVVARCAAADRDALVRPVVRLGTPVRFVASQTTAEFRIDYDGDSRR
Ga0126382_1227296723300010047Tropical Forest SoilVIALIGNLSRDLLPGQAPRAGGGPFHGARALRRLRVPARIFGRAAGEDRAALFPPVVRLGTPSRFVEGTATATFSFSY
Ga0126306_1177585323300010166Serpentine SoilVQGWRAVIALLGHLSRDLLPGEEPRVGGGAFHGARALHHLGAPARVYARCAEADRAELLPQVVRLGTPVV
Ga0126372_1210445213300010360Tropical Forest SoilVIALVGNLSRDVFPDGAPRAGGGAYHGARALRRLRVPARVITRCATIDRDELLPPLVRQGTPVTCLRGATT
Ga0134125_1243473723300010371Terrestrial SoilVISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIADKALLLPPLVRLGTPVRYVPGASTTTFAFHYEGDRRIMRIEA
Ga0105239_1360048223300010375Corn RhizosphereVIALLGNLSRDFLPGRPPHVGGGAYHGARALQRLRVPARIITRCATADRAALLPPIVRLGTPVRYVAGE
Ga0134126_1066502933300010396Terrestrial SoilVISLLGNLSLDLEPSPHAGGGPYHGARALNRLRVPARIVARCAIPDKALLLPPLVRPGTPERYVPRA
Ga0134121_1309051923300010401Terrestrial SoilVIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDVRTMHIE
Ga0137776_162151913300010937SedimentVIALIGNLSCDIFPGRRPRVGGGAYHGARALRELRVEAQVITRCAAAERETLLPPLVRLGTPVQWIR
Ga0120152_101613133300012011PermafrostVIALIGNLSRDLVHGGPPSAGGGPFHGARALQRLRVPARIVARCAVADRDVLMAPVVRLGTPGRYVTGEPTAPVSF
Ga0137378_1142082413300012210Vadose Zone SoilVIALIGNLSRDLLPGAAPRVGGGSYHGARALQRLRVPARIVARCAAADRATLVPPVIRLGPPVRYVPGEATA
Ga0137384_1056381323300012357Vadose Zone SoilVIALIGNLSRDLLPGRPPRIGGGPFHGARALQRLRVPARILARCAASDRDALLPGLIRLGTPVRYVRGD
Ga0137385_1167307713300012359Vadose Zone SoilVIALIGNLSRDLKPGHPPLVGGGPYHGARALQRLRVPARIVARCAAADRELLLPPLVRLGTP
Ga0157338_106142323300012515Arabidopsis RhizosphereVIALIGNLSLDVLPDAAPRVGGGSYHGARALQRLRVPARVVARCAASDRDRLLPPLVRLGTPVRFVAGTSTAT
Ga0164298_1135687423300012955SoilMSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATF
Ga0164303_1005678813300012957SoilVIALIGNLSRDLLPGRPPQTGGGPFHGARALQRLRVPARVFARCADADRAALLPPLVRLGTPVR
Ga0164303_1018456023300012957SoilVIALIGNLSRDDIPGHPPSVGGGPYHGARALRRLRVPARIVARCAVADKESLLPQLVRLGTPVRYVAGTTTPTFSFSYVGDRR
Ga0126369_1055357923300012971Tropical Forest SoilVIALVGNLSRDVFPDGAPRAGGGAYHGARALRRLRVPARVITRCATTDRDELLPPLVRQG
Ga0164306_1013899733300012988SoilVIALIGNLSRDLRPGAEPAAGGGPYHGARALRRLRVPARIVVRCAVADRDALLPSLIRLGTPVRYVAGEQTASF*
Ga0164306_1046920813300012988SoilMSRDLLPGLPPKAGGGPYHGARALGRLRVPARIVTRCAVADKEALLPAIVRLGTPVRWIPGESTATFGISYNGDA
Ga0164306_1175609823300012988SoilVIALIGNLSRDLLPGRPPRAGGGPFHAARALQRLRVPARLIARCAEADREALFPPLVRLGTPARYVRGEATATFSFSYDGDVRT
Ga0157369_1129451623300013105Corn RhizosphereVIALVGNLSRDLLPGEPPRVGGGSFHGARALQRLRVPARIVARCAGADRDSLLPPVVRLGTPVRFVQGKSTATFSFSYDGDRRTMH
Ga0157369_1256430313300013105Corn RhizosphereVISLVGNLSLDLEPTPHVGGGPFHGARALNRLRVPARIVARCATADKALLLPPLVSLGTP
Ga0157374_1019629213300013296Miscanthus RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFS
Ga0182021_1281475513300014502FenVRPRVGAAQGDTRKRVIALLGNLCRDVFPDRPPATGGGPYYGARALQRLRVPARIVTRCAPADRAELLPPLVRLGTPVRCISGR
Ga0132258_1148226513300015371Arabidopsis RhizosphereVIALFGNLARDLLPGQAPRVGGGAFHGARALHHLRVPSCVYARCAEADRAELLPPVVRLGTPVV
Ga0132257_10347593613300015373Arabidopsis RhizosphereVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCAIQDRDALMPHLVRLGTPVRFVPGEATATFAFSYNGDRREM
Ga0182039_1094490213300016422SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGA
Ga0187777_1115484323300017974Tropical PeatlandMIALVGNFSLDHLPGLPPKVGGGVYHGARALQRLRVPARIAARCAEEDRARLVPPLARLGTPVRYVPGT
Ga0206356_1166695823300020070Corn, Switchgrass And Miscanthus RhizosphereVIALVGNLSRDLLPGQPPRVGGGSFHGARALQRLRVPARIVARCAGADRDSLLPPVVRLGTPVRFVQGKS
Ga0194041_1024216623300021340Anoxic Zone FreshwaterVISLLGNLSRDFIPGEPQRVGGGPFHAARALRRLRVEARIFTRCATVDRDALLPPLVALGTPVTFVPGVSTATFH
Ga0193699_1026418713300021363SoilVIALIGNLSRDLLPGRPPQTGGGPFHGARALQRLRVPARIFARCAEADRAVLFPPLVRLGTPTRYVHGESTNTFSFSYNGDVRTMSID
Ga0224712_1040704023300022467Corn, Switchgrass And Miscanthus RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATADRETLLPPLIRLGTPVRYVPGVSTPAFAF
Ga0247664_110539923300024232SoilVIALIGNLSCDLLPGQRPRVGGGSFHGARALQRLRVPARVYARCAADDKGTMLPPLVRLGTPVRYVPGSSTATFSFSYDGDVRTMSVD
Ga0247692_108387413300024279SoilVIALIGNLSRDLLPGRPPQVGGGPFHGARALQRLRVPARVIARCAIEDRETLLPPLVRLGTPARYVNGVSTNTFSFSYEGD
Ga0179589_1048282423300024288Vadose Zone SoilVIALIGNLSRDLSPGRPPRTGGGPFHGARALQRLRVPARIFARCAEADRAVLFPPLVRLGTPTRYVHGESTNTFSFSYNGDVRT
Ga0207707_1027233313300025912Corn RhizosphereVIALIGNLSRDLRPGRPPLAGGGPYHGARALQRLRVPARVIARCAEEDRTALLPPLIRLGTPTRYVAGESTNTFSFSYDG
Ga0207693_1081329723300025915Corn, Switchgrass And Miscanthus RhizosphereVIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSYNGDVRTIFVVEM
Ga0207660_1016572313300025917Corn RhizosphereVIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTSTE
Ga0207657_1044351613300025919Corn RhizosphereVIALVGNLSRDFVPGKPPQVGGGPYHGARALQRLRVPARIVARCAEADRDVLMPPLVRLGTPVRYVVGTSTPTFSFSYNGERREMRIDAL
Ga0207657_1140303923300025919Corn RhizosphereVIGLLGNLSQDVLPGRPPHVGGGPYHGARALQRLRVPARIIARCATPDRDRLLPPLVRLGTPVRYV
Ga0207652_1033604913300025921Corn RhizosphereVIALLGNLSRDFLPGRPPHVGGGAYHGARALQRLRVPARIITRCATADRAALLPPVVRLGSPVRYVAGETTATFSISYEG
Ga0207652_1083911213300025921Corn RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQRSMTVDAL
Ga0207652_1093800923300025921Corn RhizosphereVIALLGNLSVDLLPGVPPRVGGGSYHGARALQRLRVPARIVARCAGDDRTALLPELVRLGTPVRYVGGSSTAT
Ga0207694_1159420513300025924Corn RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQRSMTVDALG
Ga0207650_1047064823300025925Switchgrass RhizosphereVIGLLGNLSKDVLPGRPPHVGGGPYHGARALHRLRVPARVVARCATADREQLLPPLVRLGTPVRYVPGTATAAFAFSYEGD
Ga0207644_1086916423300025931Switchgrass RhizosphereVIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGEST
Ga0207711_1035189313300025941Switchgrass RhizosphereVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCAPSDRDTLLPPLVRLGTPVRYVAGESTATFAFSYNGDRREMRVDALGD
Ga0207661_1037976723300025944Corn RhizosphereVIALIGNLSRDLRPGRPPLAGGGPFHGARALQRLRVPARVIARCAEEDRTALLPPLIRLGTPTRYVAGESTNTFSFSY
Ga0207667_1126985513300025949Corn RhizosphereVIGLLGNLSQDVLPGRPPQVGGGPYHGARALQRLRVPARIVARCATSDRDRLLPPLIRLGTPVRYVPGTST
Ga0207640_1122337713300025981Corn RhizosphereVIGLLGNLSIDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATTDRDRLLPPLVGLGTPVRYVPGSSTAAFAFSYDGDQR
Ga0207640_1160473323300025981Corn RhizosphereVIGLLGNLSKDVLPGRPPHVGGGPYHGARALQRLRVPARIVARCATADRETLLPPLIRLGTPVRYVPGVSTPAFAFTYDG
Ga0207648_1134809123300026089Miscanthus RhizosphereVIALFGNLSRDLLPGQPPRAGGGPFHGARALQFVHVPARIFARAAEADRAVLLPALIKLGTPARFVSGESTATFSFSY
Ga0209177_1011216723300027775Agricultural SoilVIALVGNLSRDFVPGRPPQVGGGPYHGARALQRLRVPARIVARCAVADREALLPPLVRLGTPVRFVEGSATPTF
Ga0265334_1009932223300028573RhizosphereVIALIGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAIEDRDALLPPVTRLGTPVRYVPGTATATFSFSYDGDVRT
Ga0307315_1016163023300028721SoilVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASSDRDRLLPPLVRLGTPVRFVPGESTATFAFSYNGDRREMR
Ga0307504_1042652923300028792SoilVIALIGNLSLDLLPGGSPRVGGGPFHGARALQRLRVPARVIARCAEQDRDKLLPPLIRLGTPTRYVRGESTAT
Ga0307284_1042588623300028799SoilVIALIGNLSRDLLPEQPPRVGGGPYPGARALQRLRVPARIVARCAADDRDDLLPPVVRLGTPVRFVEGSQTATFSF
Ga0265338_1035805023300028800RhizosphereVIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTP
Ga0311338_1142408513300030007PalsaVIALLGNLARDLFGGGQARTGGGPFHGARALRQLRVSAEIYARCALADRDALLPPLVSLGSPVHYVPGTATASFEIWEAGAERRMCVL
Ga0311349_1100958113300030294FenVIALIGNLSRDLLPGTAPRVGGGSYHGARALQRLRVPARIVVRCAVADRDTLVPPVIRLGTPVRYVPGNSTATFSFSYE
Ga0247826_1028887023300030336SoilVIALVGNLSRGGSYHGARALHRLRVPARVVARCAAADRDALMRPLVRLGTPVRFVTSQVTASFRIDYDGDGRRRMTIDALAD
Ga0265328_1034816023300031239RhizosphereVIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATFSFSYDADVRTMA
Ga0265339_1005557443300031249RhizosphereVIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATFSFS
Ga0265316_1030629413300031344RhizosphereVIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYV
Ga0265313_1004573943300031595RhizosphereVIALLGNLSRDLLPGQAPRVGGGSYHGARALQRLRVPARIVARCAVEDRGVLLPPVTRLGTPVRYVPGTATATF
Ga0307374_1044514423300031670SoilVIALIGNLSRDLLPARQPHVGGGPYHGARALQRLRVPARIVARCATEDRAALLPAVIALGTPVRYVPGTNTATFSFSYDGDVRTMAIDAL
Ga0311351_1075058523300031722FenVIALIGNLSRDLLPGTAPRVGGGSYHGARALQRLRVPARIVVRCAVADRETLVPPVIRLGTPVRYVPGN
Ga0318493_1008982813300031723SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGASTATFTMSYRGDVREMHV
Ga0318500_1073448923300031724SoilVIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRLR
Ga0302321_10330878113300031726FenVIALIGNLSRDHLPGKPPRVGGGSYHGARALAGIRVPARIFARCAAVDRDALMPPVIHLGTPVRYVPG
Ga0318501_1073175613300031736SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADRDALVPPLIRLGSPVR
Ga0318492_1039598823300031748SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYVPGT
Ga0318548_1032765923300031793SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADHDALVPPLIRLGSPVRYV
Ga0318568_1021707113300031819SoilVIALLGNLSRDYLPGRPPRVGGGAYHGARALQRLRVPARVIARCATADRDALVPPLIRLGSPVRYVPGASTATFTMSYRGDVREM
Ga0307413_1096744313300031824RhizosphereVIALVGNLSRDLLPGKPPRVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFVGAKTTPTFR
Ga0318517_1043337023300031835SoilVIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRLG
Ga0318495_1022590223300031860SoilVIALVGNLSCDLFPGRMPRVGGGAYHGARALRRLHTQAQVITRCETTDRETLLPPLVRL
Ga0307411_1069540523300032005RhizosphereVIALVGNLSRDLLPGKPPRVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFV
Ga0308173_1033619913300032074SoilVIALIGNLSLDVLPGAAPRIGGGSYHGARALQRLRVPARVVARCASGDRDRLLPPLVRLGTPVRFVAGQSTATFAFSYDG
Ga0307415_10005160913300032126RhizosphereVIALVGNLSRDLLPGKPPHVGGAPYHGARALHRLRVPARIVARCAAADREALLPPVVRLGTPVRFVGAKTTPTFRIEYDGDRR
Ga0335071_1055378523300032897SoilMIALVGNLSRDHVPGRPPLVGGGVYHGARALQRLRVPARVVARCAEADRDELVPPLARLGTPARYVPGTSTAT
Ga0335076_1024046213300032955SoilVIALVGNLSCDLFPGRVPRVGGGAYHGARALRHLSMPAQVITRCAAADRSTLLPPLVRLGTPVQWI
Ga0372946_0034802_1_2373300034384SoilVIALIGNLSRDLLPGRPPQAGGGPFHGARALQRLRVPARVIARCAEIDREALLPPLVRLGTPTRYVPGELTNTFSFSYD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.