Metagenome Family F074502

Basic Information
Family ID	F074502
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	98 residues
Representative Sequence	MATKADFSEDEWKTMQKGVTGAGMLVSVSDRDFTDSFGEASALAKYLGRQREGDASELMRELATAKGTGFGFTDSPQEVETETLAALHSSVATL
Number of Associated Samples	107
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.84 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (99.160 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (22.689 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.336 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.38% β-sheet: 0.00% Coil/Unstructured: 42.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01654	Cyt_bd_oxida_I	15.97
PF01863	YgjP-like	7.56
PF01740	STAS	1.68
PF01263	Aldose_epim	0.84
PF13419	HAD_2	0.84
PF01370	Epimerase	0.84
PF01182	Glucosamine_iso	0.84
PF05185	PRMT5	0.84
PF03733	YccF	0.84
PF14026	DUF4242	0.84
PF12697	Abhydrolase_6	0.84
PF01988	VIT1	0.84
PF07883	Cupin_2	0.84
PF05872	HerA_C	0.84
PF03706	LPG_synthase_TM	0.84
PF00355	Rieske	0.84
PF01471	PG_binding_1	0.84
PF00230	MIP	0.84
PF04229	GrpB	0.84
PF07650	KH_2	0.84
PF04024	PspC	0.84
PF01019	G_glu_transpept	0.84
PF13412	HTH_24	0.84
PF00196	GerE	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	15.97
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	7.56
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.84
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.84
COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	Replication, recombination and repair [L]	0.84
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.84
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.84
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.84
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.84
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.84
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.84
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	0.84
COG4076	Predicted RNA methylase	General function prediction only [R]	0.84

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.16 %
All Organisms	root	All Organisms	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.16 %
cellular organisms	root	All Organisms → cellular organisms	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %

Scaffold	Taxonomy	Length	IMG/M Link
3300009822\|Ga0105066_1042995	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.63%
Host-Associated	Host-Associated	24.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.59%
Plants	Host-Associated → Plants	24.37%
Aquatic	Environmental → Aquatic	5.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.49%
Peat	Environmental → Terrestrial → Peat	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Freshwater	Environmental → Aquatic → Freshwater	1.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.68%
Roots	Host-Associated → Plants → Roots	1.68%
Marine	Environmental → Aquatic → Marine	0.84%
Sediment	Environmental → Aquatic → Sediment	0.84%
Floodplain	Environmental → Terrestrial → Floodplain	0.84%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Lake	Environmental → Aquatic → Freshwater → Lake	1.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.84%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.20%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.84%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.84%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004079	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026827	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027995 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_105928272	3300000363	Soil	VATKSDFTEEEWKTMQRGVAGAGTLVSVSDPDFTDSFGEAGALAKYLAEQQQNSSSILIRDLAHVHGTGIGFTASHEKAETETLDALRSA
JGI1027J12803_1029432552	3300000955	Soil	VATKADFTEDEWKTMQRGVTGAGTLTSVADADFTDTFGEASALAKYLADRRRSSDSALVRDLASVHGTGFGLTASRDEVEAG
JGI10216J12902_1023278781	3300000956	Soil	MATKSDFSEAEWDALHKGVTGAGMLVSVADRDFTDTFGEAGALAKHLRAEHEQSESALVRDIAAVHGSGFGFTASPQKVETETLEALRSSTATLAAKAPDE
Ga0055514_101489341	3300004079	Natural And Restored Wetlands	MASKADFTQDEWATLWKGVTGAGMLVSVADRDFTDSFGEASALAKAISEERISGASELLRELAAGHGTGFGLTASPQKVETETLAALG
Ga0062590_1018029042	3300004157	Soil	VATKADFTEEEWKLMQKGVTGAGALVSISDPDFTDSFGEASAIGKYLAQQHEKSDSVLIRDLAHVHGTGFGLTASLEKVETETLDALRSATVTLQAKAPDGL
Ga0063356_1057350571	3300004463	Arabidopsis Thaliana Rhizosphere	MATKADFTEEEWKTMQKGVTGAGALVSISDPDFTDSFGEASAIGKYLAEQREKSDSVLIRDLTHVHGTGFGLTASREKVETE
Ga0062595_1002838552	3300004479	Soil	VATKADFTEEEWKLMQKGVTGAGALVSISDPDFTDSFGEASAIGKYLAQQHEKSDSVLIRDLAHVHGTGFGLTASLEKVETETLDALRSATVTLQAKAPD
Ga0062595_1012178001	3300004479	Soil	VATKADFTEDEWKTMQRGVTGAGTLTSVADADFTDTFGEASALAKYLAEARRSSDSALVRDLASVHGTGFGMTASRDEVETGTLSALRSAVATLEAKAPDEL
Ga0062595_1024684451	3300004479	Soil	MTSETETRGAGVATKADFTEEEWKTMQKGVTGAGMLVSISDADFTDSFGEASALAKHLAEEQQRSGSALIRDLAHVHGTGFGLTASREKAETETLDALRAAV
Ga0062591_1008103581	3300004643	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASELIRELAHAKGTGFGFTDSPQEVETETLEALRSSVATLAA
Ga0062591_1013115511	3300004643	Soil	MASKSDFTEDEWETMQKGIVGAGMLVSVSDRDFTDTFGEVGALAKYLADQHEHAESPLVRELAETHRTGFGITTSAEKVEAQTLDSLRAAVAAL
Ga0062591_1021871152	3300004643	Soil	MAAKADFSEEEWDTLHKGVTGAGLLVSVGDRDFTDSFGEANALAHRLLEEHEHSESELVRELAGVRGTGFGFTTSAKKAEAETLEALRSATAILAAKAPDEADAYRKLVLDVADAVANAK
Ga0066388_1075004061	3300005332	Tropical Forest Soil	MAAKADFTEDEWNALEKGVTGAGMLVSVGDRDFTDAFGEASALAKALAAQRERSGSDLVRELAGVRGTGYGFTASPQEVETEMLVSLDVAMKALAAKAPEE
Ga0066388_1075354891	3300005332	Tropical Forest Soil	VATKADFTEAEWKTMQKGVTGAGMLVSASDADFTDSFGEASALAKYLAHQQQDSGSALIRDLAHMHSTGFGFTTSREKAETETFESLRSAIATLQTKAPDDLAAYQE
Ga0070660_1008031691	3300005339	Corn Rhizosphere	MDASGNREKGADVATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLAEQQRNSGSDLIGDLAHVHGTGFGLTASREKAETETLEALRSAAATLQEK
Ga0070661_1013144762	3300005344	Corn Rhizosphere	VATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLADQQQHSGSVLIRDLAHVHGTGFGLTASREK
Ga0070667_1013012872	3300005367	Switchgrass Rhizosphere	VATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLAEQQRNSGSDLIGDLAHVHGTGFGLTASREKAETETLEALRSAAATLQEKA
Ga0070709_105121711	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MATKADFTEDEWKTMQKGVTGAGMFVSVSDADFTDSFGEVGALAKRLGKEHEENASELMRELAHIHGSGFGLTASRQEVEAGTIEALHSAT
Ga0070696_1010259782	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLAEQQRNSGSDLIGDLAHVHGTGFGLTASREKAETETLEAL
Ga0066698_101963441	3300005558	Soil	VATKADFTEDEWGTLHKGVTGAGMLVSVSDRDFTDTFGEAGALAKRLRKEHEQSPSELVRELAGTHGTGFGFTASPQKVEAETLEA
Ga0066903_1077205101	3300005764	Tropical Forest Soil	MATKADFTEEEWHDLHKGVTGAGMLVSVGDPDFTDSFGEASALARRLRGEHEHNPSPLMRELASGHGTGFGFGASPAKVEAETVEA
Ga0068858_1001498761	3300005842	Switchgrass Rhizosphere	MATKADFTEDEWHALQKGVTGAGMLVSVSDADFTDSFGEASALAKFLAEQRRTNERELVREIAAVHGGGFGLTASREKVETETMAALR
Ga0081455_107421783	3300005937	Tabebuia Heterophylla Rhizosphere	MATKADFSEDEWEALHKGATGSGLMVSVGDRDFTDTFGEAGALARQMREAHEQSASELVRELAGIRGSGFGFTTSPEKA
Ga0075417_103923202	3300006049	Populus Rhizosphere	MATKADFTEDEWEAMKKGVTGAGMLVSIGDRDFTDTFGEVSALAKRLSEERKEGGSELMRELAAGRPSGFGLTASPDEVESKTLEALRSATAILAAKAPDEAGA
Ga0075364_100289641	3300006051	Populus Endosphere	MATKADFTEDEWEAMKKGVTGAGMLVSIGDRDFTDTFGEVGALAKRLSEERKEGGSELMRELAAGRPSGFGLTASPEEVESKTLEALRSATAILAAKAPDEAGAYR
Ga0075432_101060931	3300006058	Populus Rhizosphere	MATKADFTEDEWEAMKKGVTGAGMLVSIGDRDFTDTFGEVGALAKRLSEERKEGGSELMRELAAGRPSGFGLTASPDEVESKTLEALRSATAILAAKAPDEAG
Ga0073934_106175773	3300006865	Hot Spring Sediment	MATRADFTDDEWKAMERGVTGAGMLVSVGDRDFTDSFGEASALAKALAAQHEHSSSELVRDLADVRGTGFGMTVSMQEVQSETIADLGVAMGAILAKAPEEADAYR
Ga0075434_1009863582	3300006871	Populus Rhizosphere	MATKADFTEDEWHALQKGVTGSGMLVSVSDADFTDSFGEASALAKFLGKQRQKSDSELVREVAAVHGGGFGLTASREKVETETMAALRSAVTTLSAK
Ga0075434_1019394762	3300006871	Populus Rhizosphere	MATKADFTDAEWEALHKGVTGAGMLVSVGDRDFTDTFGEAGALAKRMREEHEQSQSELIREIAGVHGSGFGLTASPQKVETETLA
Ga0075424_1006881451	3300006904	Populus Rhizosphere	VATKADFTEEEWKTMQKGVTGAGMLVSISDADFTDSFGEASALAKHLAEEQQRSESALIRDLAHVHGTGFGLTASREKAETETLDALRAAVT
Ga0075436_1014356552	3300006914	Populus Rhizosphere	MATKADFTDAEWEALHKGVTGAGMLVSVGDRDFNDTFGEAGALAKRMREEHEQSQSELIREIAGVHGSGFGLTASPQKVETETLAALRTATSTLAAKAPDELDGYKKLVLDVADAVANAKGG
Ga0111539_117291331	3300009094	Populus Rhizosphere	MAGKADFTEEEWDALRKGVTGAGMLVSVGDRDFTDSFGEASALAHRLLEEHEQSESELVRELAGVRSTGFGFTLSAKKAE
Ga0111539_131031611	3300009094	Populus Rhizosphere	MATRSDFTDDEWEAMQHGVTGAGALVSVSDRDFTDTFGEASALAKALAAYREQSDSVVIRELAKARGAGFGLTDSPQEMEAKT
Ga0066709_1025643202	3300009137	Grasslands Soil	MASKADFTEEEWKAMQKGVTGAGMLVSVSDRDFTDTFGEAGALARSLAEQHQSNESELIRELAGIHGSGFGLTASPEKVESETLSALRTAMAALASKAPIPA
Ga0114129_129837441	3300009147	Populus Rhizosphere	MATKADFTEDEWEAMKKGVTGAGMLVSISDRDFTDTFGEVGALAKRLSEERKEGGSELMRELAAGRPSGFGLTASPEEVETQTL
Ga0111538_122170841	3300009156	Populus Rhizosphere	MAGKADFTEEEWDALRKGVTGAGMLVSVGDRDFTDSFGEASALAHRLLEEHEQSESELVRELAGVRSTGFGFTLSAKKAEAETLEALRSATAILAAKAPDEADAYRKLVLDVADAVANAK
Ga0111538_126916171	3300009156	Populus Rhizosphere	MATRSDFTDDEWEAMQHGVTGAGALVSVSDRDFTDTFGEASALAKALAAYREQSDSVVIRELAKARGAGFGLTDSPQEME
Ga0111538_130285672	3300009156	Populus Rhizosphere	VATKADFTEEEWKTMQKGVTGAGMLVSISDADFTDSFGEASALAKHLAEEQQRSESALIRDLAHVHGTGFGLTASREKAETETLDALRAA
Ga0105252_102750872	3300009678	Soil	MATKADFSEDEWKALQKGMTGAGMLVSVSDRDFTDSFGEASALAKYLGRQREEGASELMKELAHAKGTGFGLTDSPQEV
Ga0105066_10429952	3300009822	Groundwater Sand	MATKADFTEDEWETMQKGVTGAGMLVSVGDRDFTDSFGEAGALAKYLGDQREGSESELVRELASVRGTGFGLTDSQQEVEAETLAAKAPDEAGAYRQLVLDVAEAVAEAKGGVKPGETAAVEAIKGALGPA*
Ga0126313_101454712	3300009840	Serpentine Soil	MATRTDFTEDEWETIRKGVTGAGMLVSIGDRDFTDTFGEAGALAKRLNEEREQSGSQLVRQLATGRPSGFGLTDSPQEVEAKTLEALRSATAILAAKAPDEAGA*
Ga0126304_106037062	3300010037	Serpentine Soil	MATKTDFTEDEWETMKKGVTGAGMFVSIGDRDFTDTFGEVGALTKRLSQEREQSESQLVRELTAGRPSGFGLTASPQEVEA
Ga0126309_106991522	3300010039	Serpentine Soil	MATRADFTEDEWETMRKGVTGAGMLVSIKDRDFTDTFGEVGALAKRLSEERMDSPSALMRELASDRPKGFGLTASPDEVEAETLDALRSAIAI
Ga0126380_104662873	3300010043	Tropical Forest Soil	MAAKADFTEDEWETMKKAVSGAGILVSVGDRDFTDTFGEVAALTKRLSEERAESTSALVREVASERPKGFGLTASPQEIETETIDALRSATAILAAKAPDEADAYRQFVLDV
Ga0126311_103253233	3300010045	Serpentine Soil	MATRADFTEDEWETMRKGVTGAGMLVSIGDRDFTDTFGEVSALAKRLNEERGESPSALMRELASDRLKGFGLTASPDEVEAETLDALRSAIAILAAKAPDEVG
Ga0126382_120150141	3300010047	Tropical Forest Soil	MATKADFSEDEWTALHKGATGAGMMVSVGDRDFTDTFGEAGALAKQMRKAHEHSQSELVRELAGIRGSGFGFTTSPQKAETETLDSLRAAMAALEAKAPEEKAAYRQFVLDVANAVASAKGGVTPSETAVIEKVTAALDAS*
Ga0126372_132446301	3300010360	Tropical Forest Soil	MEGAEMATKADFSEDEWKTMHKGVTGAGMFVSASDADFTDSFGEASALAHFLAEQHQGNSSELVRELTGIHGSGFGLTASPQKVEAETLSS
Ga0134066_103659971	3300010364	Grasslands Soil	MASKADFTEEEWKAMQKGVTGAGMLVSVSDRDFTDTFREAGALARSLAEQHQSNESELIRELASTHGSGFGLTASPQKVEEETLASLRSATATLASKAPDEVDAYR
Ga0105239_133638992	3300010375	Corn Rhizosphere	MDSSGNREKGADVATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLAEQQRNSGSDFIGDLAHVHGTGFGLTASREKAETETLEALRSAAATLQ
Ga0126383_110804231	3300010398	Tropical Forest Soil	MATKADFTEQEWDALHKGVTGAGLLVSVGDRDFTDTFGEAGALAKQLREAHERSTSELVRELAGVRGTGFGFTTSPAKAETETLDALNSAMTALA
Ga0150985_1142415911	3300012212	Avena Fatua Rhizosphere	MKPTHGAGRDTGGSTDRGGPMATKADFTEEEWKALQKGVTGAGMLVSVSDRDFTDTFGEASALAKYMAAQHETNESPLIREIAASKGSGFGMTASVDKVDAQTFQALATALETLQA
Ga0137370_105287312	3300012285	Vadose Zone Soil	MASKADFTEEEWKAMQKGVTGAGMLVSVSDRDFTDTFGEAGALARSLAEQHQSNESELIRELAGIHGSGFGLTASPDKVESETLSSLRTAMAALASKAPDDL
Ga0157300_11190152	3300012884	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASALAKYLGRQRESGASDLIRELAHAKGTGFGFTDSPQEVETETLE
Ga0157294_102245171	3300012892	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASELIRELAHAKGTGFGFTDSPQEVETETLEALRSSVATLAAKASDEVDAYRQLV
Ga0157296_101100482	3300012905	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASELIRELAHAKGTGFGFTDSPQEVETE
Ga0162650_1000780272	3300012939	Soil	MATKADFSEDEWKTMQKGVTGAGMLVSVSDRDFTDSFGEASALAKYLGGQRESGPSELMRELAHAKGTGFGLTDSPQEVETETLAAIRSSVATMESRARETPSSRRAN
Ga0126369_109504343	3300012971	Tropical Forest Soil	VATKADFTEEEWKAMQRGVTGAGMLVSVGDRDFTDSFGEASAMAKYLAGQHQQNESELLRAVAGTHGSGFGLFTSPQKMEAETFEAL
Ga0134081_103758301	3300014150	Grasslands Soil	MASKADFTEEEWETMRKGVAGAGMLVSVGDRDFTDTFGEAGALAKQLGQEHEAAGSEFIRELAAGRPAGFGLTASTQEVEAETLEALRSTTAI
Ga0134078_103700202	3300014157	Grasslands Soil	MIVERKVVMASKADFTDQEWKAMQKGVTGAGMLVSISDRDFTDTFGEAGALAKYLGEEHEKSGSELIRELASTHGSGFGLTASPQKVEEETLASLRSAAATLASKAPDEVDAYRQ
Ga0075351_10820912	3300014318	Natural And Restored Wetlands	MANKADFTEDEWKALQKGVTGAGMLVSVGDRDFTDSFGEASALAKYLAAQKQANESTLMRGIADIHGTGFGMTDSPQKVQAETMDALRAALA
Ga0163163_102821381	3300014325	Switchgrass Rhizosphere	MATKADFTEDEWHALQKGVTGAGMLVSVSDADFTDSFGEASAFGKFLAEQHQKNESELVREIAGVHGGGFGLTASREKVETETMAALRTAVA
Ga0132258_108279564	3300015371	Arabidopsis Rhizosphere	VATKADFTKEEWKTMQKGVTGSGALVSISDPDFTDSFGEASAIGKYLAQQHEKSDSVLIRDLTHVHGTGFGLTASREKVETETLDALRSATA
Ga0132256_1019013692	3300015372	Arabidopsis Rhizosphere	MAGKADFSEEEWDTLHKGVTGAGLLVSVGDRDFTESFGEANALARRLVEEHEHSESELVRELAGVRGTGFGFTTSAKKAEAETLEALRSATAILAAKA
Ga0132256_1024749762	3300015372	Arabidopsis Rhizosphere	MASKADFTEDEWETMRKGVAGAGMLVSVGDRDFTDTFGEVATLAKRLGQEQQAGGSELMRELAAGKPAGFGLTASAQEVEEETLEALRSATATLAAKA
Ga0132256_1030542772	3300015372	Arabidopsis Rhizosphere	MDSSGNREKGADVATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSMAKYLAEQQRNSGSDLIGDLAHVHGTGFGLTAS
Ga0182032_115694422	3300016357	Soil	VATKTDFSEDEWKAMHKGVTGAGMLVSVSDADFTDSFGEAKALAKELVEERTQGTTQLVRELASGGGTGFGFGASRDKVEAETLDSLRSTM
Ga0182037_121360712	3300016404	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIGSAMATLAAKAPEERDAYRQFVLDLANAVAGAKGG
Ga0134074_12597792	3300017657	Grasslands Soil	VATKADFTEDEWGTLHKGVTGAGMLVSVSDRDFTDTFGEAGALAKRLRKEHEQSPSELVRELAGTHGTGFGFTASPQKVEAETLEALRSAAAMLAARAPGEAEAY
Ga0134083_101805502	3300017659	Grasslands Soil	MASKADFTEEEWETMRKGVAGAGMLVSVGDRDFTDTFGEAGALAKRLGQEREAGGSEFIRELAAGRPAGFGLTASAQEVEAET
Ga0187785_103818171	3300017947	Tropical Peatland	MATKADFTEDEWKTMQKGVAGAGALVSVSDPDFTDSFGEASALAKYLAEQQQASGSVLIRDLAHVHGTGFGFTTSREKAETETL
Ga0190268_104535682	3300018466	Soil	MATKADFSEDEWQAMQRGITGAGMLVSVSDRDFTDSFGEASAIAKYLARQREEGSSELMKELAQAKGTGFGLTDSPQKVETETLDALSSSVATLTTKAPD
Ga0190270_124608992	3300018469	Soil	MATKADFSEEEWKTMQKGVTGAGMLVSVSDRDFTDTFGEASAISKYLGRQREEGATELIKELAHAKGTGFGLTDSPQEVETETLDALRASAATLAAKASGEVAHYRELVL
Ga0190274_135556941	3300018476	Soil	MATKADFSEDEWKTMQKGVTGAGMLVSVSDKDFTDSFGEASALAKYLGRQRDEGASELIKELAHAKGTGFGLTDSRQEVETETLDALHSS
Ga0190271_105821661	3300018481	Soil	MATKADFSEDEWKAMQKGVTGAGMLVSVSDRDFTNSFGEASALAKYLGRQREEGATELIKELAHAKGTGFGLTDSPQEVET
Ga0190271_124173581	3300018481	Soil	MATKADFTEDEWKAMQKGITGAGMLASISDRDFTDSFGEASALAKFLGAQRESNASDLIRELAAVKSTGFGFTDSPQ
Ga0066669_112656141	3300018482	Grasslands Soil	MATKADFTEEEWQAMQKGVVGAGMLVSFSDRDFTDTFGESKALAKYLGAQHRVNPSPLIREITGGHGSGFGMTASAEKVECGALAPLRS
Ga0173481_103444462	3300019356	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASELIRELAHAKGTGFGFTDSPQEVETETLE
Ga0193741_10363291	3300019884	Soil	MATKADFSEDEWKTMQKGVTGAGMLVSVSDRDFTDSFGEASALAKYLGRQREGDASELMRELATAKGTGFGFTDSPQEVETETLAALHSSVATL
Ga0212128_104448602	3300022563	Thermal Springs	MATKADFTSDEWTALEKGVTGAGMLVSVGDRDFSDSFGEASALAKALAAQRGSSSELVCELAAVRGTGFGLTASPHEVESETIAALDKIRQALGGAA
Ga0207685_103567571	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MATKADFTEEEWKALQKGVTGAGMLVSVSDRDFTDTFGEASALAKYMAAQHETNESPLIREIAASKGSGFGMTASVDKVDAQTFQALATAL
Ga0207664_119542101	3300025929	Agricultural Soil	VATKADFTDAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASSLAKYLAEQQQHGGSDLIRDLAHVHGTGFGLTASREKAETETLDALRSAA
Ga0207706_107691691	3300025933	Corn Rhizosphere	VATKADFTEEEWKTMQKGVTGAGMLVSISDADFTDSFGEASALAKHLAEEQQRSGSALIRDLAHVHGTGFGLTASREKAETETLDALRAAVT
Ga0207711_116915691	3300025941	Switchgrass Rhizosphere	MDSSGNREKGADVATKADFTEAEWKTMQKGVTGAGMLVSVSDPDFTDSFGEASALAKHLAEEQQRSGSALIRDLAHVHGTGFGLTASREKAETETL
Ga0207591_1084441	3300026827	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASDLIRELAHAKGTGFGFTDSPQEVETETLEALRSSVATLAAKASDEVDAYRQLVLGIGAF
Ga0209886_10437802	3300027273	Groundwater Sand	MATKADFTEEEWETMQKGVTGAGMLVSVGDRDFTDSFGEAGALAKYFGEQREASQSQLVRELASVRGTGFGLTASQQEVGAETVAALRSASATLAA
Ga0207981_11128172	3300027560	Soil	MATKADFTEEEWKTMQKGVTGAGLLVSVGDRDFTDSFGEAGALAKYLAEERDQNASELIQELAHVHGSGFGFTASQQEVETETVAALGSAVATL
(restricted) Ga0233416_100179793	3300027799	Sediment	MATRADFTEDEWKAMEKGVTGAGMLVSVGDRDLTDSFGEASALAKALAVRREQSPSELVRELAAVRGTGFGMTASPEKVEQETLASLRLAT
Ga0209382_102552231	3300027909	Populus Rhizosphere	MAGKADFTEEEWDALHKGVTGAGMLVSVGDRDFTDSFGEASALAHRLLEEHEQSESELVRELAGVRSTGFGFTLSAKKAEAETLEALRSAKAILAAKAPDEADAYRKLVLDVADAVANAK
(restricted) Ga0233418_101498742	3300027995	Sediment	MATRADFTEDEWKAMEKGVTGAGMLVSVGDRDLTDSFGEASALAKALAVRREQSPSELVRELAAVRGTGFGMTASPQKVE
Ga0247822_108021671	3300028592	Soil	MATKADFSEDEWKTMQKGITGAGVLVSVSDRDFTDTFGEASAVAKYLGRQRESGASDLIRELAHAKGTGFGFTDSPQEVET
Ga0307305_104265321	3300028807	Soil	VASKADFTDEEWKTMQKGVTGAGTLVSISDPDFTDSFGEASAIGKYLAEQREQSDSTLIRDLTHVHGTGFGLTASREKVETETLDALRSA
Ga0247825_107801221	3300028812	Soil	MAAKADFTEDEWKAMQKGVTGAAALVSISDRDFTDSFGEASAIAKYLAEQHDKSESALVRDLAKVRGTGFGLTASAQEVESETLDALHAATE
Ga0302257_11193531	3300028855	Fen	MASKDDFSADEWGTLWKGVTGAGMLVSVADRDFTDSFGEASALAKRISEERVQGASELLRELAAGHGTGFGLTASPQKVETETLEALRAATATLTTKAPDELAGYRQFVLDVADAVAEAKGG
Ga0247827_109855311	3300028889	Soil	MATKADFTEDEWKAMQKGVTGAGALVSISDRDFTDSFGEASAIAKYLAQQRETSDSPLVRDLAKVRGTGFGLTASAQEVEAQTVDALHTATETLGAKAP
Ga0311350_104617851	3300030002	Fen	MASKDDFSADEWGTLWKGVTGAGMLVSVADRDFTDSFGEASALAKRISEERVQGASELLRELAAGHGTGFGLTASPQKVETETLEALRAATA
Ga0302299_101297903	3300030010	Fen	MASKADFTADEWGTLWKGVTGAGMLVSVGDRDFTDSFGEASALAKRISEERVSGASELLRELAAGHGTGFGLVASPQKVETETLEALGSAT
Ga0311333_100643274	3300030114	Fen	MASKDDFSADEWGTLWKGVTGAGMLVSVADRDFTDSFGEASALAKRISEERVQGASELLRELAAGHGTGFGLTASPQKVETETLEALHAATATLTTKAPDELAGYRQFVLDVA
Ga0247826_105696322	3300030336	Soil	WKTMQKGITGAGVLVSVSDRDFTDTFGEASALAKYLGRQRESGASDLIRELAHAKGTGFGFTDSPQEVETETLEALRSSVATLAAKASDEVDAYRQLVLGIGAFVAEAKGGVTDVEAATIAKLEEALGVS
Ga0307498_102680782	3300031170	Soil	MATKADFTEDEWDALQKGVTGAGMLVSVSDADFTDSFGEASAFAKFLGEQHRTNDSELVREIAGVHGHGFGLTASREKVE
Ga0307499_102668221	3300031184	Soil	MATKADFTEDEWKALQRGVTGAGTLVSVSDRDFTDSFGEASALAKHLAEQQKTGATELMREIAHARGTGFGFTDSPQEV
Ga0307505_105481681	3300031455	Soil	MATKADFSEDEWKALQRGVTGAGTLVSVSDRDFTDSFGEASALAKHLAEQQKSGTSELMREIAHARGTGFGFTDSPQEVEAGTLEALRT
Ga0318496_107312931	3300031713	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIGSAMATLAAKAPEE
Ga0318554_108802952	3300031765	Soil	MATKADFTEDEWKAMQKGITGAGMLVSVSDQDFTDSFGEASALAKALAAQRQQGPSELIRELASARGTGFGLTASAHEVESETLASLASATPSTS
Ga0318523_104536771	3300031798	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIGSAMATLAAKAPEERDAYRQFVLDLANAVAGAKGGVTPAETAA
Ga0318565_104147551	3300031799	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDALGSAIATLAAKAPEERDAYRQFVLDLANAVAGAKGG
Ga0318567_106862921	3300031821	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIGSAMATLAAKAPEERDAYRQFVLDLANAVAGAKGGVT
Ga0310892_109810281	3300031858	Soil	MATKADFSEVEWKTMQKGITGAGMLVSVSDRDFTDTFGEASALAKYLGRQRESGASDLIRELAHAKGTGFGFTGSPQEVETETLEALRSSVATLAVKASDEVDAYRQVVLGIGAFVA
Ga0306919_106772962	3300031879	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIG
Ga0311367_123325332	3300031918	Fen	MASKDDFTADEWGTLWKGVTGAGMLVSVADRDFTDSFGEASALAKRISEERVTSASELLRELAAGHGTGFGLTASPQKVETETLEALRAA
Ga0318569_104914731	3300032010	Soil	VATKDMFTEDEWEALHKGATGAGLLVSVSDRDFTDSFGEASELAKRLRQEHEESASELVRELAAVRGTGFGLTTSPQKAETETLDAIGSAMATLAAKAPEERDAYRQFVLDLANAVAGAKGGVTPAETAAIE
Ga0310890_116407791	3300032075	Soil	MATKADFTEDEWEAMKKGVTGAGMLVSIGDRDFTDTFGEAGALAKYLTAQRQQGATELVRELSEGRPPGFGFTASPQEVETETLAALGSAKAILAEKSPDEADSYAQHVLG
Ga0335069_118865511	3300032893	Soil	MATKTDFTEDEWSALQKGVTGSGMLVSVSDADFTDSFGEASALAHYLAEQSEKGETELIRELSHVHGSGFGLTASAQKVREETLE
Ga0335084_123448351	3300033004	Soil	MATRADFTEDEWKAMQKGVTGTGLLVSVSDRDFTDTFGEAGALAKTVAEEHEKSESALIRELASIHGSGFGLTGSQEKVENETLDALRSAVATLTAKAPDDVAAYRKLV
Ga0335077_101148293	3300033158	Soil	MATKADFTEDEWSAMQKGVTGAGLLVSVSDADFTDSFGEASALAKYLVGQRENGETELVRELSHAHGGGFGLGASPQKVKEETLEALAPRS
Ga0326726_107569401	3300033433	Peat Soil	MATKAAFTEDEWDALHKGVTGAGLLVSVGDRDFTDTFGEAGALAKQLREAHERSTSELVRELAGSRGTGFGFTTSPEKAEAEALAALGSAMTTLAAKAPDEADAYRQLVLDVANA
Ga0247829_112759351	3300033550	Soil	MPTKADFSEDEWQAMQKGITGAGMLVSVTDRDFTDSFGEASAIAKYLGRQREEGSSELMKDLAHAKRSGFGLTDSLQEVETETMDALRSSVATLTAKAPDEVG
Ga0247830_110702251	3300033551	Soil	MATKADFSEDEWKTMQKGITGAGALVSVSDRDFTDTFGEASALAKYLARQRESGASDLIRELAHAKGTGFGLTDSPQEVETETLAALRSSVATLTAKASDEVDGYRELV
Ga0364935_0335307_180_503	3300034151	Sediment	MATKADFSEDEWKTMQKGVTGAGMLVSVSDRDLTDSFGEASALAKYLGRQRETGASELIRDLAHAKGTGFGFTDSPQEVEAETLAALRSSVATLAAKASDEVDAYREL
Ga0370485_0087299_1_348	3300034358	Untreated Peat Soil	VRHDLSHDHANGTTGDPMASKADFTEDEWETLWKGVTGAGMLVSVGDRDFTDSFGEASALAKRISEERVSGASELLRELAAHHGTGFGLVASPQKVETETLESLGSATALLTAKAP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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