Metagenome / Metatranscriptome Family F074488

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074488
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	53 residues
Representative Sequence	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGP
Number of Associated Samples	106
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.42 %
% of genes near scaffold ends (potentially truncated)	91.60 %
% of genes from short scaffolds (< 2000 bps)	81.51 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (13.445 % of family members)
Environment Ontology (ENVO)	Unclassified (40.336 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.697 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.95% β-sheet: 25.61% Coil/Unstructured: 52.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13456	RVT_3	5.88
PF02586	SRAP	5.88
PF01850	PIN	4.20
PF00075	RNase_H	2.52
PF13180	PDZ_2	1.68
PF00589	Phage_integrase	1.68
PF02739	5_3_exonuc_N	0.84
PF03466	LysR_substrate	0.84
PF04014	MazE_antitoxin	0.84
PF02518	HATPase_c	0.84
PF16859	TetR_C_11	0.84
PF14534	DUF4440	0.84
PF07676	PD40	0.84
PF02321	OEP	0.84
PF00248	Aldo_ket_red	0.84
PF13414	TPR_11	0.84
PF07731	Cu-oxidase_2	0.84
PF02661	Fic	0.84
PF13586	DDE_Tnp_1_2	0.84
PF14659	Phage_int_SAM_3	0.84
PF00383	dCMP_cyt_deam_1	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	5.88
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.68
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.84
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.15 %
Unclassified	root	N/A	3.36 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.20 %
Unclassified	root	N/A	3.36 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.20 %
Unclassified	root	N/A	3.36 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.20 %
Unclassified	root	N/A	3.36 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Unclassified	root	N/A	3.36 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.84 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.84 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Unclassified	root	N/A	3.36 %
Planctopirus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus	1.68 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.84 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.84 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.06 %
Unclassified	root	N/A	3.36 %
Planctopirus hydrillae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus → Planctopirus hydrillae	1.68 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.84 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.84 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10125639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300001356\|JGI12269J14319_10008603	All Organisms → cellular organisms → Bacteria	8526	Open in IMG/M
3300001593\|JGI12635J15846_10905438	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300002914\|JGI25617J43924_10038349	Not Available	1726	Open in IMG/M
3300003219\|JGI26341J46601_10009855	All Organisms → cellular organisms → Bacteria	3130	Open in IMG/M
3300004091\|Ga0062387_101460909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300004092\|Ga0062389_102024481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	752	Open in IMG/M
3300004092\|Ga0062389_104367990	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300005435\|Ga0070714_101698033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005467\|Ga0070706_100442349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300005555\|Ga0066692_10314125	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300005591\|Ga0070761_10365152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300005921\|Ga0070766_10075379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1953	Open in IMG/M
3300005921\|Ga0070766_10937926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300006028\|Ga0070717_11928991	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300006050\|Ga0075028_100711226	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006086\|Ga0075019_10035518	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300006893\|Ga0073928_10042246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4198	Open in IMG/M
3300009088\|Ga0099830_10657507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300009089\|Ga0099828_11637586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300009518\|Ga0116128_1063157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300009519\|Ga0116108_1079935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300009521\|Ga0116222_1440735	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300009522\|Ga0116218_1138020	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300009522\|Ga0116218_1461285	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300009523\|Ga0116221_1148025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300009616\|Ga0116111_1135379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300009632\|Ga0116102_1040945	All Organisms → cellular organisms → Bacteria → Acidobacteria	1499	Open in IMG/M
3300009636\|Ga0116112_1004619	All Organisms → cellular organisms → Bacteria	6907	Open in IMG/M
3300009645\|Ga0116106_1021359	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300009672\|Ga0116215_1096158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300009683\|Ga0116224_10459672	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300010341\|Ga0074045_11040660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010343\|Ga0074044_10661918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300010343\|Ga0074044_11157125	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010379\|Ga0136449_103147323	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300010379\|Ga0136449_103597463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012096\|Ga0137389_10071283	All Organisms → cellular organisms → Bacteria → Acidobacteria	2688	Open in IMG/M
3300012203\|Ga0137399_11463339	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300012205\|Ga0137362_11658785	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300012360\|Ga0137375_10413086	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300012923\|Ga0137359_11040123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300012925\|Ga0137419_10724032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300012927\|Ga0137416_10971778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300012930\|Ga0137407_11793245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300014158\|Ga0181521_10311125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300014158\|Ga0181521_10488378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300014159\|Ga0181530_10222755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300014159\|Ga0181530_10404002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300014159\|Ga0181530_10660070	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300014165\|Ga0181523_10078417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2003	Open in IMG/M
3300014495\|Ga0182015_10017642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5968	Open in IMG/M
3300016730\|Ga0181515_1227892	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300017822\|Ga0187802_10295323	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300017925\|Ga0187856_1034374	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300017928\|Ga0187806_1090406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300017940\|Ga0187853_10014011	All Organisms → cellular organisms → Bacteria	4686	Open in IMG/M
3300017940\|Ga0187853_10494283	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300017941\|Ga0187850_10008624	All Organisms → cellular organisms → Bacteria	6906	Open in IMG/M
3300017943\|Ga0187819_10754205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300017996\|Ga0187891_1115672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300017998\|Ga0187870_1113908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300018006\|Ga0187804_10404883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018007\|Ga0187805_10494263	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300018009\|Ga0187884_10038382	All Organisms → cellular organisms → Bacteria → Acidobacteria	2321	Open in IMG/M
3300018009\|Ga0187884_10452175	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300018022\|Ga0187864_10233751	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300018022\|Ga0187864_10238652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300018023\|Ga0187889_10270573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300018025\|Ga0187885_10576633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300018026\|Ga0187857_10011150	All Organisms → cellular organisms → Bacteria	5553	Open in IMG/M
3300018042\|Ga0187871_10099860	Not Available	1674	Open in IMG/M
3300018043\|Ga0187887_10371314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300019786\|Ga0182025_1168360	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300019789\|Ga0137408_1154839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300020199\|Ga0179592_10016148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3282	Open in IMG/M
3300020579\|Ga0210407_10072071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2595	Open in IMG/M
3300020579\|Ga0210407_10279416	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300020581\|Ga0210399_10684809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300021088\|Ga0210404_10755406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300021178\|Ga0210408_11298699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300021403\|Ga0210397_10350544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300021420\|Ga0210394_11474279	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300021433\|Ga0210391_10646595	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus → Planctopirus hydrillae	829	Open in IMG/M
3300021474\|Ga0210390_10197071	Not Available	1703	Open in IMG/M
3300021477\|Ga0210398_10310548	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctopirus → Planctopirus hydrillae	1286	Open in IMG/M
3300021478\|Ga0210402_10300434	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300022730\|Ga0224570_107065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300022881\|Ga0224545_1035699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300025453\|Ga0208455_1050722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300025459\|Ga0208689_1007953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3773	Open in IMG/M
3300025459\|Ga0208689_1008060	All Organisms → cellular organisms → Bacteria	3731	Open in IMG/M
3300025500\|Ga0208686_1023977	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300025506\|Ga0208937_1037879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300025576\|Ga0208820_1154896	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300025854\|Ga0209176_10085160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300025910\|Ga0207684_10472890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300026356\|Ga0257150_1067320	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300027546\|Ga0208984_1116586	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300027604\|Ga0208324_1112154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300027651\|Ga0209217_1113942	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300027696\|Ga0208696_1082500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1083	Open in IMG/M
3300027698\|Ga0209446_1013405	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300027729\|Ga0209248_10018344	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300027812\|Ga0209656_10164013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300027905\|Ga0209415_10745887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300027915\|Ga0209069_10097129	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300028047\|Ga0209526_10788696	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300028536\|Ga0137415_11159415	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300029943\|Ga0311340_11174295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300030007\|Ga0311338_10108565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3424	Open in IMG/M
3300030503\|Ga0311370_12271994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300030991\|Ga0073994_12377670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300031057\|Ga0170834_112379555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031708\|Ga0310686_107400454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032160\|Ga0311301_11200750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300032515\|Ga0348332_12125562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300033402\|Ga0326728_10914161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Aquatic	Environmental → Aquatic	42.02%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.10%
Freshwater	Environmental → Aquatic → Freshwater	38.66%
Peat	Environmental → Terrestrial → Peat	4.20%
Sediment	Environmental → Aquatic → Sediment	2.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	38.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.66%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.52%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101256393	3300000567	Peatlands Soil	MAVTIEMQNTGDSRARREILAGVEHVLSDVVGEWRVSIVGSRANDNWEMKVE
JGI12269J14319_1000860312	3300001356	Peatlands Soil	MQNTGDPRARGEILAIIEHVLSDRAGEWRVSIVGSHANDNWEMKV
JGI12635J15846_109054381	3300001593	Forest Soil	VVALYNIGDMAVTIEMQNTGDPRARSEILAGVEHVLSDMAGEWRVSIVGSRANDNWE
JGI25617J43924_100383494	3300002914	Grasslands Soil	VTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPRGFERSYTLVGEAGE
JGI26341J46601_100098554	3300003219	Bog Forest Soil	MAVTIEMQNTGDPRARREILAGVEHVLSDVAGEWRVSIVGSRA
Ga0062387_1014609091	3300004091	Bog Forest Soil	LYNTGVMAVTIEMQNTGDSRARKEILAGVDHVLSDVAGEWRVSMVGSRANDNWEMKV
Ga0062389_1020244813	3300004092	Bog Forest Soil	MTVTIEIHNTGDSRARREILAGVEHVLSDVAGEWRVSIVGS
Ga0062389_1043679901	3300004092	Bog Forest Soil	MAVTIDMQNTGDPRARREILASVEHVLSDAEREWRVSIVGSRADDNWEMKVEGPRGFERSYT
Ga0070714_1016980331	3300005435	Agricultural Soil	MPVTVEMQNTGDSRVGREILVVVEHLLGDRPGEWRVLIVGSRANDNWEMKVEGPKGFERSYTL
Ga0070706_1004423493	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTIEMQNTGDSRTRGETVAVIEHVLCDKPGEWRVSIIGSRANDNWEMKVEGLNGFERSYTLVGSAGE
Ga0066692_103141252	3300005555	Soil	MAVVVEMHNTGDPRARAEIAAVIEHLLSDRLVEWRVPIIGSRENDNWELRIAGPNGFE
Ga0070761_103651521	3300005591	Soil	VTIEMQNTGDPRVRGEIVAILEHVLSDRPGEWRVSIVGSHANDNWELKVEGPE
Ga0070766_100753791	3300005921	Soil	VTIEMQNTGDSRARSEILAGIEHVLSDVAGQWRVSIVGSRANDNWEMKVEGPRGFKRSYTLLGEAGEH
Ga0070766_109379262	3300005921	Soil	VTIEMQNTGDTRARREILAGVEHVLSDVAGEWRVSIVGSRADD
Ga0070717_119289912	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAAKVEMQNTGDPRTRGEIAALIEHVLSDRPGEWRVSIVGS
Ga0075028_1007112261	3300006050	Watersheds	MAVVVEMQNTGDSRARAEIALVIEHVLSDRPGEWRVSIVGSR
Ga0075019_100355181	3300006086	Watersheds	MAARVEMQNTGDPRTRGEIVAVIEHVLSDRPGEWRGSIVGSRANDNWEMRVEGPAGFERSYTLAGGA
Ga0073928_100422464	3300006893	Iron-Sulfur Acid Spring	MAVTVEMQNTGDPRERGEILAGVEHVLSEVAGEWRVS
Ga0099830_106575072	3300009088	Vadose Zone Soil	MAARVEMQNTGDPRTRGEIAALIEHVLSDRRGEWHVSIVGSRANDNWEM
Ga0099828_116375862	3300009089	Vadose Zone Soil	MAVTIEVQNTGDPRSRSEILAGVEHVLSDVAGEWRVSIVGSRAN
Ga0116128_10631573	3300009518	Peatland	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDN
Ga0116108_10799351	3300009519	Peatland	MAVTIEMQNTGDSRTRREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPRGFERSYTLVGDA
Ga0116222_14407351	3300009521	Peatlands Soil	MAVRIEMQNTGDPRARGEIVAVIEHVLSDRTGEWRVSIVGSHANDNWEMKVEGPEGFERSYTL
Ga0116218_11380201	3300009522	Peatlands Soil	MAVRIEMQNTGDPRAGGEIVAIIEHVLSDRAGEWRVSIVGSHANDNWEMKLEGPAGFERS
Ga0116218_14612851	3300009522	Peatlands Soil	MQNTGDPRARGEIVAVIEHVLSDRAGEWRVSIIGSHANDNWEMK
Ga0116221_11480251	3300009523	Peatlands Soil	MAVRIEMQNTGDPRARGEILAIIEHVLSDRAGEWRVSIVGSHANDNWEMKVEGPEGFERSYTL
Ga0116111_11353791	3300009616	Peatland	MAVRIEMQNTGDPRVRGEIVAILEHVLSDRPGEWHVSIVGSH
Ga0116102_10409454	3300009632	Peatland	MAMTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWEMKVEG
Ga0116112_100461913	3300009636	Peatland	MAMTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWEMK
Ga0116106_10213595	3300009645	Peatland	MAMTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWE
Ga0116215_10961581	3300009672	Peatlands Soil	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPHGFERSYTLVGEA
Ga0116224_104596721	3300009683	Peatlands Soil	MAVTIEMQNTGDSRARREILAGVEHVMSDVAGEWLVSIVGSRANDNWEMKVEG
Ga0074045_110406601	3300010341	Bog Forest Soil	MLVTLYNTTDMAVTIEMQNTGDPRARSEILAGVEHVLSGAAGEWRVSIVGSRATDNWEMKVEGP
Ga0074044_106619181	3300010343	Bog Forest Soil	MGDMAVRIEMQNTGDPRARGEIVGVIEHVLSDRPGEWRVSIVGSHG
Ga0074044_111571252	3300010343	Bog Forest Soil	MAVTIEMQNTGDPRARKEILAGVEHVLRDAAGEWRVSIVGSRANDNWEMKVEGPRGFERSYTLVGEAGEHQ
Ga0136449_1031473232	3300010379	Peatlands Soil	MAVRIEMQNTGDPRVRGEIVAIIEHVLSDRAGEWRVLIVGSRANDNWEMKVEGPEGFER
Ga0136449_1035974631	3300010379	Peatlands Soil	MALTGLLKKGLLVTLYNTGDMAVTVEMQNTGDSRARREILASVEHVLSDVAGEWRVSIVGSRANDNWE
Ga0137389_100712834	3300012096	Vadose Zone Soil	MAAKVEMQNTGDPRTRGEIAALIEHVLSDRRGEWHVSIVGSRANDNWEIREEGPEGF*
Ga0137399_114633391	3300012203	Vadose Zone Soil	MAVTVEMQNTGDSRTRREILAGVEHVLSDMAGEWRVSIVGARANDDWEMKVEGTRGFE
Ga0137362_116587851	3300012205	Vadose Zone Soil	MAARIEMQNTGDPRTRGEIAALIEHVLSDRPGDWHVSIIGSRANDSWEMKVEGPE
Ga0137375_104130861	3300012360	Vadose Zone Soil	MPVTVEMQNTGDSVTRSEVIAVIEHVLSDRRGDWRVSIVGSRANDKWAMKIEGPAGFER
Ga0137359_110401231	3300012923	Vadose Zone Soil	MGEMAVRTEMQNTCDPRARGEIVAVIEHVLSDKLGEWRVSIVEAHANDNWEMKVEGPEG
Ga0137419_107240322	3300012925	Vadose Zone Soil	MGDMAVTIEMQNTADPRARSEILAGVERVLSELVGEWRVSIVGVFANETWEI*
Ga0137416_109717781	3300012927	Vadose Zone Soil	MAARVEMQNTGDSRTRGEIVALIEHVLSDRPGEWRVSIVGSRASDNWEMKVEGPEGFE
Ga0137407_117932451	3300012930	Vadose Zone Soil	MAVMVEMHTTGDPRARAEVAAVIEHFLSDRPGEWRGSI
Ga0181521_103111251	3300014158	Bog	MAVTIEMQNTGDSRARREIPAGVEHVLSDLAGEWRVSVVGSRANDNWEMKVEGPHGFERSYTL
Ga0181521_104883781	3300014158	Bog	MAVTIEMQNTGDPRARREILAGVEHVLSDAAGEWRVSIVGSRADDNWEMKVE
Ga0181530_102227551	3300014159	Bog	MAVTIEMQNTGDPRARREILAGIEHVLSDAAGEWRVSIVGSRADDN
Ga0181530_104040021	3300014159	Bog	MAVRIEMQNTGDPRARGEMVAVIEHVLSDRPGEWRVSILGSHANDNWEMDVEGPEGFERSYT
Ga0181530_106600701	3300014159	Bog	MAVTIEMQNTGDARARQEILAGVEHVLSDVAGEWRVSIVGSRANDNWEMK
Ga0181523_100784171	3300014165	Bog	MAVRIEMQNTGDPRARGEMVAVIEHVLSDRPGEWRVSILGSHANDNWEMNVEGPEGFERSYTLVGGAGAHQ
Ga0182015_100176423	3300014495	Palsa	VTVEMQNTGDSRMGSEILAGVEHVLSEVAGEWRVSHRTI*
Ga0181515_12278922	3300016730	Peatland	MQNTGDPRARGEMVAVIEHVLSDRPGEWRVSILGSHANDNWEMNVEGPEGFERSYTLVGGAGAH
Ga0187802_102953231	3300017822	Freshwater Sediment	MAVTVEMQNTGDSRARREILAGVEHVLSDAAGEWRVSIVGSRANDNWDMKVEGPHGFERSYTLVG
Ga0187856_10343743	3300017925	Peatland	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNW
Ga0187806_10904062	3300017928	Freshwater Sediment	MAVTIEMQNTGDPRARKEILAGVEHALSDAAGEWRVSIVGSRCE
Ga0187853_100140111	3300017940	Peatland	MTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVG
Ga0187853_104942832	3300017940	Peatland	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGP
Ga0187850_1000862413	3300017941	Peatland	MTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWEMKVEGP
Ga0187819_107542051	3300017943	Freshwater Sediment	MAVTIEMQNTGDPRARSEILAGVEHVLSGAAGEWRVSIVGSRANDNWE
Ga0187891_11156721	3300017996	Peatland	LYNTRDMAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNW
Ga0187870_11139082	3300017998	Peatland	LYNTRDMAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGP
Ga0187804_104048831	3300018006	Freshwater Sediment	VTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMK
Ga0187805_104942631	3300018007	Freshwater Sediment	MQNTGDPRARGEIVAIIEHVLSDRAGEWRVSIVGSHANDNWEMKVEGPEGF
Ga0187884_100383821	3300018009	Peatland	MLVTLYNTTDMAVTIEMQNTGDARARREILAGVEHVLSGAAGEWRVSIVGSRANDNWEMKVEGPQGFERSYTLVGAA
Ga0187884_104521751	3300018009	Peatland	MALTRLLKKLLLVTLYNTGDMAVTIEMQNTGDSRARREILAGVEHVLSNVAGEWRVSIVGSRANDNWEMKVE
Ga0187864_102337511	3300018022	Peatland	MAVTIEMQNTGDSRARREIFAGVEHVLSDVAGEWRVSIVG
Ga0187864_102386522	3300018022	Peatland	MAVTVEMQNMGDSRARREILTGVEHVLSDVAGEWRVSIVG
Ga0187889_102705731	3300018023	Peatland	MAVTIEMQNTGDARARREILAGVEHVLSGAAGEWRVSIVGSRANDNWEMKVEGPQGFERSYTLVGDAGE
Ga0187885_105766332	3300018025	Peatland	VTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPQGFER
Ga0187857_1001115011	3300018026	Peatland	MTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWE
Ga0187871_100998605	3300018042	Peatland	VTIEMQNTGDSRARREIPAGVEHVLSDLAGEWRVSVVGSRANDNWEM
Ga0187887_103713141	3300018043	Peatland	MAVTIEMQNTGDARARREILAGVEHVLSGAAGEWR
Ga0182025_11683601	3300019786	Permafrost	MQNTGDPRVRGEIVAIIEHLLHDRAGEWRVSIVGSHANDNWELKVEGPEGFERS
Ga0137408_11548391	3300019789	Vadose Zone Soil	MPVTVEMQNTGDSVTRSEVVAVIEHVLSDRRGDWRVSIVGSRANDKWAMKIEGPAGFERTYSLDGAAG
Ga0193712_10330852	3300019880	Soil	MHNIGDVPTSREIVALIEHVLSDRPGAWRVSIMGSRANDNWEMKVEGPKGFER
Ga0179592_100161481	3300020199	Vadose Zone Soil	MAVVVEMQNTGDPRARAEIALVIEHLLSDRPGEWRVSIVGSRENDNW
Ga0210407_100720711	3300020579	Soil	MAVTVEMQNTGDSRTRREILAGVEHVLSDVAGDWRVSIVGSRANDNWEMKVEGPRGFERSYTLVGEVGE
Ga0210407_102794163	3300020579	Soil	MAVVVEMQNTGDSNTRAEIALVIEHVLSDRPGEWRVSIVGSRENDNWEMKIEGPKG
Ga0210399_106848092	3300020581	Soil	MAVVVEMQNTGDSEARAEIALVIEHVLSDRPGEWRVSIVGSRENDNWELKIEGPKGFERSFTLI
Ga0210404_107554061	3300021088	Soil	MAVVVEMQNTGDSNARAEIALVIEHVLSDRPGEWRVSIVGS
Ga0210408_112986991	3300021178	Soil	MAVTIEMQNTGDSRARSEILAGIEHRLSDVAGQWRVSIVGSRANDNWEMKVEGPRGFERSYTLLGEAGTSL
Ga0210397_103505442	3300021403	Soil	LLVTLYNTGDMAVTIEMQNTGDSRARREILAGVEHVLSDLAGEWRVSMVGSRANDDWERKGEGRDP
Ga0210394_114742792	3300021420	Soil	MQNTGDPRVRGEIVAIIEHLLHDRAGEWRVSIVGSHANDNWEMRVEGPEGFERSYTLVGGSGEHEP
Ga0210391_106465952	3300021433	Soil	VTIEMQNTGDSRARSEILAGVEHVLSAVPGEWRVSIVGSRAND
Ga0210390_101970713	3300021474	Soil	MAVTIEMQNTGDSRARSEILAGIEHRLSDVAGQWRVSIVGSR
Ga0210398_103105482	3300021477	Soil	MAVTIEMQNTGDSRARSEILAGVEHVLSAVPGEWRVSI
Ga0210402_103004343	3300021478	Soil	MAVVVEIQNTGDSKTRAEIALVIEHVLSDRPGEWRVSIVGSRENDNWELKIEGPKGFERSYT
Ga0224570_1070652	3300022730	Rhizosphere	MQNTGDPRARGEILAIIEHLLHDRAGEWRVSIVGSHANDNW
Ga0224545_10356992	3300022881	Soil	MQNTGDPRARGEIVAVIEHVLSDRTGEWRVSIVGSH
Ga0208455_10507223	3300025453	Peatland	VTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPRGFER
Ga0208689_10079538	3300025459	Peatland	MTIEMQNTGDSRARREILAGLEHVLSDVAGEWRVSIVGSRANDNWEMK
Ga0208689_10080601	3300025459	Peatland	MAVTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRAN
Ga0208686_10239771	3300025500	Peatland	MLVTLYNTTDMAVTIEMQNTGDARARREILAGVEHVLSGAAGEWRVSIVGSR
Ga0208937_10378791	3300025506	Peatland	VTIEMQNTGDSRARREILAGVEHVLSDVAGEWRVSIVGSRANDNWE
Ga0208820_11548962	3300025576	Peatland	MQNTGDPRVRGEIVAIIEHVLSDRPGEWRVSIVGSHANDNWEMKVEGPAGFERSY
Ga0209176_100851601	3300025854	Arctic Peat Soil	MAVTIEMQNTGDSRARGEILAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPRGFERS
Ga0207684_104728901	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSVTIEMQNTGDSRTRGETVAVIEHVLCDKPGEWRVSI
Ga0257150_10673202	3300026356	Soil	MQNTGDPRALGDIVAHIEHVLSDRAGEWRVSIVGSRANDNWEMK
Ga0208984_11165861	3300027546	Forest Soil	MAVKVEMQNTGDPPTGGEIAAVIEHMLSDRSGEWRLSIVGSHANDNWEMKVE
Ga0208324_11121541	3300027604	Peatlands Soil	MQNTGDPRARGEIVAVIEHVLSDRAGEWRVSIIGSHANDNWEMKVEG
Ga0209217_11139422	3300027651	Forest Soil	MLVRVEMQNTGDPRVRGEIVAIVEHVLSDRPGEWR
Ga0208696_10825003	3300027696	Peatlands Soil	MALTIEIQNTGDSRAHREILAGVEHVLSDVTGEWRVSIVGSRANDNWEVKVEGPRGFERSHTL
Ga0209446_10134055	3300027698	Bog Forest Soil	VTIELQNTGDCRARREILAGVEHVLSDVAGQWRVSIVGSRANDNWEMKVE
Ga0209248_100183441	3300027729	Bog Forest Soil	MQNTGDPRVRGEIVAILEHLLHDRAGEWRVSIVGSHANDNWELKVEGPEGFERSYTLA
Ga0209656_101640131	3300027812	Bog Forest Soil	MAVRIEMQNTGDPRVRGEIVAILEHVLSDRPGEWRVSIVGSHGNDNWEMKVE
Ga0209415_107458871	3300027905	Peatlands Soil	MQNTGDPRARGEILAIIEHLLHDRAGEWRVSIVGSHANDNWELKVEGPEGFERSYTLVG
Ga0209069_100971292	3300027915	Watersheds	MAVVVEMQNTGDSTARAEIALVIEHVLSDRPGEWRVSIVGSRERRV
Ga0209526_107886962	3300028047	Forest Soil	MQNTGDPRVRGEIVAIIEHVLSDRRGEWRVSIVGSRANDNWEMKVEGPEGF
Ga0137415_111594152	3300028536	Vadose Zone Soil	MQNTGDSRTRGEIVALIEHVLSDRPGEWRVSIVGSRASDNWEMKVEGPEGFE
Ga0311340_111742951	3300029943	Palsa	MTVTIEMQNTGDSRVRGEILAGVEHVLSDLAGEWRVSIVGSRANDNWEMKVEGPHGFERSYTLV
Ga0311338_101085657	3300030007	Palsa	VTLERAKRFFAGVEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPQGFERSYTLVGAAGEHQPEA
Ga0311370_122719941	3300030503	Palsa	MTVTIEMQNTGDSRVRGEILAGVEHVLSDLAGEWRVSIVG
Ga0073994_123776701	3300030991	Soil	MQNTGDPRTRGEIEALIEHVLSDRPGEWHVSIIGSRANDGWEMKVEGPEGFERQY
Ga0170834_1123795551	3300031057	Forest Soil	VTIEMQNTGDPRVRSEILAGVEHVLSEVAGEWRVAIVRSR
Ga0310686_1074004542	3300031708	Soil	MLNTGDPRARGEVVAIIEHVLSDRAGEWRVSIVGS
Ga0311301_112007502	3300032160	Peatlands Soil	MAVTVEMQNTGDSRECREILAGLEHVLSDVAGEWRVSIVGSRANDNWEMKVEGPQGFERSYTLV
Ga0348332_121255621	3300032515	Plant Litter	MALTGLLEKYLLVTLYNTGDMAVTIEMQNTGDPRARREILAGVERVLSDAAGEWPVSIVGSRADDNCEMKVE
Ga0326728_109141612	3300033402	Peat Soil	MAVTIEMQNTGDPRARREILAGIEHVLSDAAGEWRVSIVGSRADDNWEMKVEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences