NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074487

Metagenome / Metatranscriptome Family F074487

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074487
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 45 residues
Representative Sequence MTCVAVMVVPLVVPSTRTGSPVVMALAEVELVPFWYVVEDASLTVTF
Number of Associated Samples 100
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.40 %
% of genes near scaffold ends (potentially truncated) 55.46 %
% of genes from short scaffolds (< 2000 bps) 83.19 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (63.866 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.689 % of family members)
Environment Ontology (ENVO) Unclassified
(27.731 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.824 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.33%    β-sheet: 0.00%    Coil/Unstructured: 50.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF07690MFS_1 2.52
PF00072Response_reg 1.68
PF00486Trans_reg_C 1.68
PF00005ABC_tran 1.68
PF07883Cupin_2 1.68
PF03988DUF347 1.68
PF09995MPAB_Lcp_cat 0.84
PF04237YjbR 0.84
PF00990GGDEF 0.84
PF13683rve_3 0.84
PF06737Transglycosylas 0.84
PF00753Lactamase_B 0.84
PF08241Methyltransf_11 0.84
PF01568Molydop_binding 0.84
PF02467Whib 0.84
PF11387DUF2795 0.84
PF04185Phosphoesterase 0.84
PF08022FAD_binding_8 0.84
PF04240Caroten_synth 0.84
PF03446NAD_binding_2 0.84
PF05974DUF892 0.84
PF09335SNARE_assoc 0.84
PF01738DLH 0.84
PF00903Glyoxalase 0.84
PF00440TetR_N 0.84
PF00571CBS 0.84
PF14417MEDS 0.84
PF13458Peripla_BP_6 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG4705Uncharacterized membrane-anchored proteinFunction unknown [S] 1.68
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.84
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.84
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.84
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 0.84
COG2324Uncharacterized membrane proteinFunction unknown [S] 0.84
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.84
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 0.84


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.87 %
UnclassifiedrootN/A36.13 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908044|A5_c1_ConsensusfromContig23619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae664Open in IMG/M
2140918007|ConsensusfromContig149957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1459Open in IMG/M
2170459012|GOYVCMS01AHSZFNot Available512Open in IMG/M
3300001532|A20PFW1_1263319All Organisms → cellular organisms → Bacteria → Terrabacteria group894Open in IMG/M
3300001535|A3PFW1_10361252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1159Open in IMG/M
3300001535|A3PFW1_10764771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata707Open in IMG/M
3300001536|A1565W1_11975838All Organisms → cellular organisms → Bacteria → Terrabacteria group583Open in IMG/M
3300001593|JGI12635J15846_10004198All Organisms → cellular organisms → Bacteria12450Open in IMG/M
3300005541|Ga0070733_11106031Not Available531Open in IMG/M
3300005566|Ga0066693_10135744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium915Open in IMG/M
3300005575|Ga0066702_10004183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5596Open in IMG/M
3300005921|Ga0070766_10909251Not Available603Open in IMG/M
3300006893|Ga0073928_10072472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2984Open in IMG/M
3300007788|Ga0099795_10142581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13976Open in IMG/M
3300007982|Ga0102924_1318035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13612Open in IMG/M
3300007982|Ga0102924_1370790Not Available548Open in IMG/M
3300009521|Ga0116222_1232935All Organisms → cellular organisms → Bacteria → Terrabacteria group794Open in IMG/M
3300009525|Ga0116220_10331404Not Available673Open in IMG/M
3300009698|Ga0116216_10069322Not Available2170Open in IMG/M
3300009698|Ga0116216_10114987All Organisms → cellular organisms → Bacteria1655Open in IMG/M
3300009824|Ga0116219_10058164Not Available2283Open in IMG/M
3300010039|Ga0126309_10148449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1258Open in IMG/M
3300010154|Ga0127503_10042362All Organisms → cellular organisms → Bacteria → Terrabacteria group601Open in IMG/M
3300010159|Ga0099796_10315212All Organisms → cellular organisms → Bacteria → Terrabacteria group666Open in IMG/M
3300010322|Ga0134084_10121444All Organisms → cellular organisms → Bacteria → Terrabacteria group854Open in IMG/M
3300010337|Ga0134062_10406796Not Available667Open in IMG/M
3300010375|Ga0105239_12569804Not Available594Open in IMG/M
3300010379|Ga0136449_100976084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1368Open in IMG/M
3300010856|Ga0126358_1172839Not Available502Open in IMG/M
3300010860|Ga0126351_1207974Not Available515Open in IMG/M
3300010860|Ga0126351_1320650Not Available549Open in IMG/M
3300010861|Ga0126349_1225805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium758Open in IMG/M
3300010876|Ga0126361_10863940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata1259Open in IMG/M
3300010880|Ga0126350_10850339Not Available570Open in IMG/M
3300010880|Ga0126350_11372816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1185Open in IMG/M
3300010880|Ga0126350_11678837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae672Open in IMG/M
3300011270|Ga0137391_10924419All Organisms → cellular organisms → Bacteria → Terrabacteria group713Open in IMG/M
3300011271|Ga0137393_11288598All Organisms → cellular organisms → Bacteria → Terrabacteria group619Open in IMG/M
3300011991|Ga0120153_1072373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae589Open in IMG/M
3300011998|Ga0120114_1013941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae1767Open in IMG/M
3300012003|Ga0120163_1049361All Organisms → cellular organisms → Bacteria → Terrabacteria group1027Open in IMG/M
3300012011|Ga0120152_1013884All Organisms → cellular organisms → Bacteria3279Open in IMG/M
3300012083|Ga0154000_1120882All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300012177|Ga0153943_1116012Not Available576Open in IMG/M
3300012200|Ga0137382_11310495Not Available511Open in IMG/M
3300012206|Ga0137380_11305997Not Available610Open in IMG/M
3300012208|Ga0137376_11605243Not Available541Open in IMG/M
3300012209|Ga0137379_10275229Not Available1595Open in IMG/M
3300012209|Ga0137379_11146885All Organisms → cellular organisms → Bacteria → Terrabacteria group683Open in IMG/M
3300012211|Ga0137377_10206864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-25681884Open in IMG/M
3300012351|Ga0137386_10449063Not Available929Open in IMG/M
3300012359|Ga0137385_10150686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2045Open in IMG/M
3300012359|Ga0137385_11384191All Organisms → cellular organisms → Bacteria → Terrabacteria group567Open in IMG/M
3300012360|Ga0137375_10485076All Organisms → cellular organisms → Bacteria → Terrabacteria group1056Open in IMG/M
3300012361|Ga0137360_11782034Not Available521Open in IMG/M
3300012362|Ga0137361_10400436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp131261Open in IMG/M
3300012363|Ga0137390_10905616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae837Open in IMG/M
3300012363|Ga0137390_11303259Not Available672Open in IMG/M
3300012685|Ga0137397_10325875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1145Open in IMG/M
3300012923|Ga0137359_10992030Not Available721Open in IMG/M
3300012925|Ga0137419_10874799Not Available739Open in IMG/M
3300012925|Ga0137419_11235724Not Available626Open in IMG/M
3300012927|Ga0137416_11882498Not Available547Open in IMG/M
3300012944|Ga0137410_11035967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora silvatica700Open in IMG/M
3300012960|Ga0164301_10674499All Organisms → cellular organisms → Bacteria → Terrabacteria group774Open in IMG/M
3300012984|Ga0164309_11204139All Organisms → cellular organisms → Bacteria → Terrabacteria group636Open in IMG/M
3300013296|Ga0157374_12966809All Organisms → cellular organisms → Bacteria → Terrabacteria group501Open in IMG/M
3300013307|Ga0157372_12553917Not Available586Open in IMG/M
3300013758|Ga0120147_1038417All Organisms → cellular organisms → Bacteria → Terrabacteria group864Open in IMG/M
3300013764|Ga0120111_1126236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae594Open in IMG/M
3300013768|Ga0120155_1036728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1516Open in IMG/M
3300013770|Ga0120123_1012127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1666Open in IMG/M
3300013772|Ga0120158_10003743All Organisms → cellular organisms → Bacteria16630Open in IMG/M
3300013772|Ga0120158_10019959All Organisms → cellular organisms → Bacteria5543Open in IMG/M
3300013772|Ga0120158_10313041Not Available754Open in IMG/M
3300014056|Ga0120125_1079939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium746Open in IMG/M
3300014056|Ga0120125_1142676Not Available580Open in IMG/M
3300014489|Ga0182018_10015280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5256Open in IMG/M
3300014495|Ga0182015_10210835All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola1295Open in IMG/M
3300014501|Ga0182024_10008286All Organisms → cellular organisms → Bacteria22007Open in IMG/M
3300014501|Ga0182024_10015950All Organisms → cellular organisms → Bacteria14314Open in IMG/M
3300014501|Ga0182024_10377156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD00821843Open in IMG/M
3300014827|Ga0120171_1074531Not Available926Open in IMG/M
3300015051|Ga0137414_1219161All Organisms → cellular organisms → Bacteria → Terrabacteria group4543Open in IMG/M
3300015245|Ga0137409_11467209Not Available529Open in IMG/M
3300015357|Ga0134072_10322155Not Available584Open in IMG/M
3300018054|Ga0184621_10212470Not Available693Open in IMG/M
3300018465|Ga0190269_11002787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae631Open in IMG/M
3300018468|Ga0066662_10989109Not Available832Open in IMG/M
3300018468|Ga0066662_12109482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → unclassified Ktedonobacteria → Ktedonobacteria bacterium brp13591Open in IMG/M
3300018482|Ga0066669_10573972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria985Open in IMG/M
3300019786|Ga0182025_1227318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD00822051Open in IMG/M
3300025588|Ga0208586_1129221Not Available533Open in IMG/M
3300026317|Ga0209154_1262309Not Available587Open in IMG/M
3300026540|Ga0209376_1090311All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300026542|Ga0209805_1054173All Organisms → cellular organisms → Bacteria → Terrabacteria group1991Open in IMG/M
3300026550|Ga0209474_10015016All Organisms → cellular organisms → Bacteria6118Open in IMG/M
3300027576|Ga0209003_1089770Not Available575Open in IMG/M
3300027587|Ga0209220_1011195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. URHD00362391Open in IMG/M
3300027645|Ga0209117_1000001All Organisms → cellular organisms → Bacteria687837Open in IMG/M
3300027768|Ga0209772_10068200All Organisms → cellular organisms → Bacteria → Terrabacteria group1071Open in IMG/M
3300027903|Ga0209488_11058756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter robiniae557Open in IMG/M
3300028047|Ga0209526_10086000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2213Open in IMG/M
3300028707|Ga0307291_1086518Not Available775Open in IMG/M
3300028884|Ga0307308_10507761Not Available578Open in IMG/M
3300030490|Ga0302184_10137578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1070Open in IMG/M
3300031525|Ga0302326_11691764Not Available835Open in IMG/M
3300031708|Ga0310686_109944919All Organisms → cellular organisms → Bacteria → Terrabacteria group662Open in IMG/M
3300032160|Ga0311301_10332301All Organisms → cellular organisms → Bacteria → Terrabacteria group2398Open in IMG/M
3300032770|Ga0335085_10939296Not Available939Open in IMG/M
3300032783|Ga0335079_10313485All Organisms → cellular organisms → Bacteria1709Open in IMG/M
3300032783|Ga0335079_10779379Not Available992Open in IMG/M
3300032828|Ga0335080_12190993Not Available531Open in IMG/M
3300034163|Ga0370515_0025028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2722Open in IMG/M
3300034199|Ga0370514_062309All Organisms → cellular organisms → Bacteria → Terrabacteria group941Open in IMG/M
3300034268|Ga0372943_0085082All Organisms → cellular organisms → Bacteria → Terrabacteria group1833Open in IMG/M
3300034268|Ga0372943_0823908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium615Open in IMG/M
3300034268|Ga0372943_1005421Not Available556Open in IMG/M
3300034384|Ga0372946_0066604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1650Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.69%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost15.13%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil6.72%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.04%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.36%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost3.36%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.68%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.68%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.68%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.68%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.84%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.84%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.84%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.84%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.84%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.84%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908044Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
3300001532Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010856Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012003Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012083Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaGHost-AssociatedOpen in IMG/M
3300012177Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_c1_010856702124908044SoilVVPSTRTGLPVVMALAEIELVPFWYFVEDALSTVTF
A_all_C_033673202140918007SoilTCVAVMVVPLVVPSTRTLSPFVMALAEVELVPFWYVVEDASSTVTF
N56_015451302170459012Grass SoilVELVVPSTRTGWPFVMALAGAGLVPFWYVMEDVSLTVTL
A20PFW1_126331933300001532PermafrostVGCTMTCVAVMVVPLVVPRTRTLSPFVMALAEVELVPFWYVVEDASSTVTF*
A3PFW1_1036125233300001535PermafrostTMTCVAVMVVPLVVPSARTPSPVVMALAEVVFVPFWYVVDDASLTVTF*
A3PFW1_1076477113300001535PermafrostVAEEVVGCTMTWLAVMLVPLTVPSTRTLAPFLITLAEVELVPLRYVVEDDLLTVTF*
A1565W1_1197583823300001536PermafrostMTCVAVMVVPLVVPSTRTDSPLVMALAEVELVPFWYVVEDASSTVTC*
JGI12635J15846_1000419863300001593Forest SoilMTCVAVIVVPLVIPSTRTSSPVAMALAEVEIVPFWYVVEATSLTATF*
Ga0070733_1110603123300005541Surface SoilVVCTMTCVAVMVVPLVIPSTRTDSPVVMALAEIELVPFSYVVEDVSSTVAF*
Ga0066693_1013574413300005566SoilMTCAAAMVVSLVIPSTRTSSPVAMALAEVELVPFWYVVEDA
Ga0066702_1000418363300005575SoilMTCVAVMVVPLVVPSTRTSWPAVIALAAIELVPFLNVVEDASMTLTF*
Ga0070766_1090925123300005921SoilPAGCTVTCVAVMVVPLVVPSTRTPSPVAMSLAEVELVPFWYVVEDASLTVTF*
Ga0073928_1007247243300006893Iron-Sulfur Acid SpringGCTMTCVAAMVVPLVVPRTRTPSLVVMALAEVKLVPFWYVVDDASSTVTF*
Ga0099795_1014258113300007788Vadose Zone SoilVAAMVVPLVVLTVPSTRTLSPLVMALAKVELVPFWYVEDASSTVTC*
Ga0102924_131803513300007982Iron-Sulfur Acid SpringVVPLTVPSTRTHSPVVMALAEVELVPFWYIVEDASSTVTF*
Ga0102924_137079013300007982Iron-Sulfur Acid SpringARAAFVALFAVVPLVVPRTRTRWPGVTALAEVELVPFWYVVEDAVSTVTC*
Ga0116222_123293523300009521Peatlands SoilMTCVAVMVVPLVVPRTRTLSPGVMALVEVELVPLWYFVDDASSTVTV*
Ga0116220_1033140413300009525Peatlands SoilMTCVAVMVVELVVPSTRTGSPVVMALAEAGLVPFWYVVEDASLTVTF*
Ga0116216_1006932243300009698Peatlands SoilLPAGCTMTCVAVMVVELVVPSTRTGSPVVIALAEAGLVPFWYVVEDASLTVTF*
Ga0116216_1011498733300009698Peatlands SoilIVVPLVVPSTRTLSPFVIALAEVELVPFWYVVEDDWLTVTF*
Ga0116219_1005816413300009824Peatlands SoilPPPPVGCTMTWLAVMVVPLVVPSTRTFSPLAMVLADVGLVPFWYVVEDALLTLTF*
Ga0126309_1014844933300010039Serpentine SoilMVVPLVVPSTRTVPPFVIALAEVELVPFRYAVEGASSTITF*
Ga0127503_1004236223300010154SoilMVVELTLPSTRTLSPVVMALAEAGLVPFWYVVEDASLTVTF*
Ga0099796_1031521223300010159Vadose Zone SoilMTCVAVIVVELVVPSTRTVSPVVIALADAELVPCWYVVEDASLTVTF*
Ga0134084_1012144423300010322Grasslands SoilMVVPLVIPSTRTSSPVAMALAEVELVPFWYVVEDASLTVTF*
Ga0134062_1040679623300010337Grasslands SoilPLLAGCTMTCVAVMVVPLVVPSTRTGSPVVTALAEAALVPFSYVVADASFTVTF*
Ga0105239_1256980413300010375Corn RhizosphereTMTCVAVIVVPLVVPSTRTVSPAVTALAEAALVPFSYVVADASWTVTF*
Ga0136449_10097608443300010379Peatlands SoilSLPAGCTVTCVAVMAVELVVPSTRTGSPAVMALAEVEAVPCWYVVEDASLTVTF*
Ga0126358_117283913300010856Boreal Forest SoilLATVVCTITCVALIVVPLVVPSTSTRTPFAIALAEIELVPFSYFVEDALSTVTF*
Ga0126351_120797413300010860Boreal Forest SoilCVALMVVPLAVPSTRTDSPFVTALAEVDFDFFTYFVEDVSLMVTF*
Ga0126351_132065013300010860Boreal Forest SoilMTCVAAMVVPLVVPRTRTPSLVVMALAEVKLVPFWYVVDDASSTVTF*
Ga0126349_122580523300010861Boreal Forest SoilMTWLAVMVGPMTVPSTRTLSPLLMALAEVELVPLRYVVEDALLTVTF*
Ga0126361_1086394033300010876Boreal Forest SoilMVVELTVPSTRTGSPVVMALAEAEAVPFAYVVEDASPTVTF*
Ga0126350_1085033913300010880Boreal Forest SoilAMVVPLVVPSTRTSWPFAMALAEVELVPLAYVVDDDSLTVTA*
Ga0126350_1137281623300010880Boreal Forest SoilAMVVPLVVLTVPSTRTLSPIVMALAEVELVPFWYAVEDTSSTVTF*
Ga0126350_1167883723300010880Boreal Forest SoilCVAAMVVPLVVLTVPSTRTLSPIVMALAEVELVPFWYVVEDTSSTVTF*
Ga0137391_1092441923300011270Vadose Zone SoilMTCVAVMVVPLVVPSTRMGSPVVMALAEVGLVPFWYVVEDASATVTF*
Ga0137393_1128859823300011271Vadose Zone SoilMTCVAVMVVPLVVPSTRTGSPVVMALAEVELVPFWYVVEDASLTVTF*
Ga0120153_107237313300011991PermafrostVMVVPLTVPSTRTLSPFLMALAEIELVPFRYVVEDAFLTVTF*
Ga0120114_101394113300011998PermafrostVMVVPLVVPRTRTSSPVVMALAEVELVPFWYVVEDASSTVTF*
Ga0120163_104936113300012003PermafrostMTCVAVIVVPLVVPSARTLWPFLTALAEIELVPVRYFVEDVLLTVTF*
Ga0120152_101388453300012011PermafrostMTWLAVMVVPLTVPTARTLSPLLIALAEVELVPLRYVVDEALLTVTF*
Ga0154000_112088223300012083Attine Ant Fungus GardensMVVELVVPSTRTGSPVVMALAEAGLVPFWYVVEDASLMVTF*
Ga0153943_111601223300012177Attine Ant Fungus GardensMVVELVVPSTRTGSPVVIALAEAGLVPFWYVVEDASLTVTF*
Ga0137382_1131049513300012200Vadose Zone SoilAVMVVPLVVPSTRTGSPVVTALAEAALVPFSYVVADASSTVTF*
Ga0137380_1130599713300012206Vadose Zone SoilMVVPLVVPSTSTSWPVVMALAEVELVPFWYVVEDASSTVTF*
Ga0137376_1160524313300012208Vadose Zone SoilMTCVAVMVVPFVVPSTRTLWPFLMAAAETDCVPFRYFVEDVLLTVTF*
Ga0137379_1027522933300012209Vadose Zone SoilCTTTCVAVMVVALVVPSTRTLSPVVMALAEVEPVPFRYVVEEASLTVTF*
Ga0137379_1114688523300012209Vadose Zone SoilMTCVAVMVVPLVVPSTRTHSPVVMALAEVELVPFWYVVEDASSTVTF*
Ga0137377_1020686413300012211Vadose Zone SoilVVPLTVPSTRTVPPFLTALAAAELVPFRYVVEDALLTVTF*
Ga0137386_1044906323300012351Vadose Zone SoilMVVALVFPSTSTLSPVVMALAEVEPVPFRYVVEEASLTVTF*
Ga0137385_1015068613300012359Vadose Zone SoilQPPVGCTMTCVAVMVVPLTVPSTRTHSPVVMALAEVELVPFWYIVEDASSTVTF*
Ga0137385_1138419123300012359Vadose Zone SoilMTCVAVMVVLLVVPSTRTLSPAVTALAEAGLVAFWYVVEDASLTVTF*
Ga0137375_1048507623300012360Vadose Zone SoilMTCVAVMVVPLVVPSTRTLSPVVMALAEVELVPFWYVVADAPSTATF*
Ga0137360_1178203413300012361Vadose Zone SoilTMTWLAVMVVPLVVPSTRTPWPFLMALGELELVPFWYLVEDASSTVTF*
Ga0137361_1040043643300012362Vadose Zone SoilVLTVPSTRTLSPFVMALAEVELVPFWYIVEDASSTVTF*
Ga0137390_1090561613300012363Vadose Zone SoilTCVAAMVVPLVVLTVPSTRTLSPFVMALAEVDLVPFWYVVEDASLTVTF*
Ga0137390_1130325913300012363Vadose Zone SoilLVVPSTRTLSPVVIAFADIDFPPFWYVVEDASSTVTF*
Ga0137397_1032587523300012685Vadose Zone SoilMTCVAVMVVPLVSPSTRTPWPFLMTLAETELVPFRYVVEDASLTVTF*
Ga0137359_1099203013300012923Vadose Zone SoilMTCVAVIVVELVVPSTRTVSPVVIALANAELVPCWYVVEDASLTVTF*
Ga0137419_1087479923300012925Vadose Zone SoilMTWLAVMVVPLTVPSTRTLLPLVTALAEVEPVPFRYVVEDALLTVIF*
Ga0137419_1123572413300012925Vadose Zone SoilMTWLAVMVVPLVVPSTRTLTPFLIPLAELELVPFWYFVEDALLTVTF*
Ga0137416_1188249813300012927Vadose Zone SoilPLVVPSTRTSSPVLMKLADVELVPLMYLVEDASSTVTF*
Ga0137410_1103596713300012944Vadose Zone SoilPSTRTVSPVVIALADAELVPCWYVVEDASLTVTF*
Ga0164301_1067449923300012960SoilMTWLAVMLGPLTVPSTRTLSLLLMALAEVELVPLRYVVEDALLTVTF*
Ga0164309_1120413923300012984SoilMTWLAVIVVPLVVPSTSTLTPFVTALAEVELVPFRYVVEDALSTDTS*
Ga0157374_1296680913300013296Miscanthus RhizosphereMVIPLVVPSTRTGSPVVTALAEAALVPFSYVVADASLTVTC*
Ga0157372_1255391713300013307Corn RhizosphereVAVMVVPLVVPSTRTGSPVVTALAEAALVPFSYVVAVASWTVTF*
Ga0120147_103841723300013758PermafrostMTCVAVMVVPLVVPSTRTTTPVVMALAEVELVPFWYVVEDASSTVTF*
Ga0120111_112623623300013764PermafrostTCVAVMVVPLVVPSTRTLSPVVMALAEVELVPFWYVVEDASSTVTF*
Ga0120155_103672823300013768PermafrostMTWLAVMVVLLVMPSTRTVAPLVTAVAVAEPVPFSYTVVDAVLTVTF*
Ga0120123_101212713300013770PermafrostAVMVVPLVTPSTRTFTPVVMALAEMEVAPFWYVVEDVSLMVTF*
Ga0120158_10003743113300013772PermafrostMTWLAVMVVPLTVPSTRTLSPFLMALAEIELVPFRYVVEGAFLTVTF*
Ga0120158_1001995983300013772PermafrostMTCVAVMVVPLVVPSTRTPSPVVMALADVELVPFWYVVEDASLTVTF*
Ga0120158_1031304133300013772PermafrostVMPSTRTDAPFVTAVAEVELVPFSYVVEDASLTVTF*
Ga0120125_107993913300014056PermafrostVAVMVVPLVVPSTRTSWPVVIALAEIELVPFWNVVEDVSSTVTF*
Ga0120125_114267613300014056PermafrostLVVPRTRTVSPVVTALAEVELVPFWYVVEDTSFTVTF*
Ga0182018_1001528023300014489PalsaMTWLAVMVVPLVIPSTRTLSPFVMELDERELVAFRYVVEDTFLTVTF*
Ga0182015_1021083523300014495PalsaMTWLAVIVVPLVIPSTRAVSPFLIALAEIELLPFQYVVKDASLTGTF*
Ga0182024_10008286163300014501PermafrostVIPSTRTVSPFLIALAEIELVPFQYVVEDASLTATF*
Ga0182024_1001595013300014501PermafrostMTWLVVIVVPLVIPSTRTVSPFLIALAEIELVPFQYVVEDASLTATF*
Ga0182024_1037715613300014501PermafrostMTCVAVIVVLSVIPSTRTGSPLVTALAEAELVPFSYAVEDVSLTVA
Ga0120171_107453113300014827PermafrostMTWLAVMVVPLTVPTTRTLSPFLMALAEVELVPLRYVVDEALLTVTF*
Ga0137414_121916163300015051Vadose Zone SoilMVVPLVVPSTSTLTLFLTAAAELELVPLSYFVADAFFTVTF*
Ga0137409_1146720923300015245Vadose Zone SoilPSPVGSTVTCVAVMVVPLVVPSTRTLSPVVTALAEVELVPFWYVVADASSTVTF*
Ga0134072_1032215513300015357Grasslands SoilMVVPLTVPSTRTVPPFLTALAAAELVPFRYVVEDALLTVTF*
Ga0184621_1021247013300018054Groundwater SedimentMTWPAVMVGPLTIPSTRTLSPFLMALAEVELVPLRYVVEGAVLTVTF
Ga0190269_1100278713300018465SoilVPLVVPSTRTLSPFVMALDEVELVPFWYVVEDTSSTVTF
Ga0066662_1098910913300018468Grasslands SoilLPVGCTMTCVAAMVVPLVVLTVPSTRTLSPFVMALAEVEVVPFWYTVEDASSTVTF
Ga0066662_1210948223300018468Grasslands SoilVVLTVPRTRTLSPFVMALAEIEIVPFWYVVEDASSTVTF
Ga0066669_1057397233300018482Grasslands SoilLVVLTVPSTRTLSPFVMALAEVELVPFWYTVEDASSTVTF
Ga0182025_122731833300019786PermafrostMTCVAVIVVLSVIPSTRTGSPLVTALAEAELVPFSYAVEDVSLTVAF
Ga0208586_112922113300025588Arctic Peat SoilVPSVVPSTRTGSPAVTALDEVEVVPFWYAVEDASSIVTF
Ga0209154_126230923300026317SoilADPPPVNCTMTCVAAMVVPLVVPSARTSSPVVMAFAEVELVPFMYVVDDASLTVTF
Ga0209376_109031133300026540SoilMTYVAVIVVPLVVPSARTSSPVVMAFAEVELVPFMYVVDDASLTVTF
Ga0209805_105417343300026542SoilMTCVAVMVVPLVVPSTRTSWPAVIALAAIELVPFLNVVEDASMTLTF
Ga0209474_1001501673300026550SoilMTCAAAMVVPLVIPSTRTSSPVAMALAEVELVPFWYVVEDASLTVTF
Ga0209003_108977013300027576Forest SoilDPLLAGCTMTCVAVMVVPLVVPSTRTGSPVVTALAEAALVPLWYVVADASWTVTF
Ga0209220_101119533300027587Forest SoilVAVMVVPLVVPSTRTPVPVVIALAEVELAPFRYVVEDASLTVTF
Ga0209117_10000013103300027645Forest SoilMTCVAVIVVPLVIPSTRTSSPVAMALAEVEIVPFWYVVEATSLTATF
Ga0209772_1006820023300027768Bog Forest SoilMTCVAVIVVLSSVPSTRTVLPLVTALFDAALLPFSYLVDDVSL
Ga0209488_1105875613300027903Vadose Zone SoilATVVELTVPSTRTGSPGVMALAEAGVVSFWYVVEDASSTVTFYPLMSTL
Ga0209526_1008600033300028047Forest SoilLAVMVVPLVVPSTRTLTPVLMTLAELELVPFWYFVEDAFLMVTF
Ga0307291_108651813300028707SoilTMTCVAVMVVPLVVPSTRTGSPGVTALAEVGLDPSWYLVEDDWSTVTS
Ga0307308_1050776113300028884SoilGCTMTCVAVMVVPLVVPSTRTASPGVMALAEAGLDPFWYVVEDASSTVTC
Ga0302184_1013757823300030490PalsaMVVLLVVPSTRTGSPLVTALTEAGLVPFSYVVADASSMVTF
Ga0302326_1169176423300031525PalsaVVPRTRTFLPVVMALAEVELVPFSYVVEDVSSIVTF
Ga0310686_10994491913300031708SoilMTCAAVIVVPSVVPSTRTGSPAVTAMDEVEVVPFWYAVEDASSIVTF
Ga0311301_1033230123300032160Peatlands SoilMTCVAVMVVPLVVPRTRTLSPGVMALVEVELVPLWYFVDDASSTVTV
Ga0335085_1093929613300032770SoilMVVLLTVPSTRTGSFVVIALAEAGLVPFWYVVEDASSTVTF
Ga0335079_1031348523300032783SoilMVVPLVVPRTRTGVPVVMALAEAGLFPFWYVVEDASSTVTF
Ga0335079_1077937933300032783SoilLTVPSTRTGSFVVIALAEAGLVPFWYAVEDASSTVTF
Ga0335080_1219099323300032828SoilPAVMVVPLVVPRTRTGVPVVMALAEAGLFPFWYVVEDASSTVTF
Ga0370515_0025028_2586_27113300034163Untreated Peat SoilMVVELVVPRTRTGSPVVMALAEAGLVPFWYVVEDASLTVTF
Ga0370514_062309_461_5863300034199Untreated Peat SoilMTCVAVMAVPLVVPSTRTDLPVVMALAEAGLVPFWYVVEDA
Ga0372943_0085082_409_5523300034268SoilMTRVAVMVVPLVVPSTRTVLPVVTALAEVERGPFWYVVEAALSTVTF
Ga0372943_0823908_22_1653300034268SoilMTWLAVMVVPFVVPSTRTLAPFVMALAELELDPFWYFVDDALLTVTF
Ga0372943_1005421_188_3133300034268SoilMVVPLVVPSTRTCLPFVMALAEVELVPFRYFVEDASLTVTF
Ga0372946_0066604_963_11093300034384SoilMMTFVAVMVVPLVVPTTRTLSPFVMALAELELVPFWYVVEDASLTVTF


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