NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074484

Metagenome / Metatranscriptome Family F074484

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074484
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 89 residues
Representative Sequence MSTVEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGAAGTRPAFKFHITCHDAWQLECGLDELEAR
Number of Associated Samples 94
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.11 %
% of genes near scaffold ends (potentially truncated) 24.37 %
% of genes from short scaffolds (< 2000 bps) 77.31 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (60.504 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(15.966 % of family members)
Environment Ontology (ENVO) Unclassified
(58.824 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.025 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.00%    β-sheet: 8.62%    Coil/Unstructured: 66.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF03706LPG_synthase_TM 17.65
PF07715Plug 9.24
PF00230MIP 6.72
PF01895PhoU 6.72
PF05685Uma2 6.72
PF04794YdjC 1.68
PF07883Cupin_2 1.68
PF01370Epimerase 0.84
PF01663Phosphodiest 0.84
PF02353CMAS 0.84
PF08241Methyltransf_11 0.84
PF02690Na_Pi_cotrans 0.84
PF02310B12-binding 0.84
PF00990GGDEF 0.84
PF01757Acyl_transf_3 0.84
PF02776TPP_enzyme_N 0.84
PF05199GMC_oxred_C 0.84
PF13305TetR_C_33 0.84
PF13578Methyltransf_24 0.84
PF05035DGOK 0.84
PF08479POTRA_2 0.84
PF10609ParA 0.84
PF04055Radical_SAM 0.84
PF13609Porin_4 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 17.65
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 6.72
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 6.72
COG3394Chitooligosaccharide deacetylase ChbG, YdjC/CelG familyCarbohydrate transport and metabolism [G] 1.68
COG1283Na+/phosphate symporterInorganic ion transport and metabolism [P] 0.84
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.84
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.84
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 0.84
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.84
COG37342-keto-3-deoxy-galactonokinaseCarbohydrate transport and metabolism [G] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms60.50 %
UnclassifiedrootN/A39.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100072080All Organisms → cellular organisms → Bacteria3189Open in IMG/M
3300003316|rootH1_10045345All Organisms → cellular organisms → Bacteria → Proteobacteria2721Open in IMG/M
3300003320|rootH2_10011282All Organisms → cellular organisms → Bacteria → Proteobacteria3505Open in IMG/M
3300005238|Ga0073692_1022483All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300005260|Ga0074072_1000049All Organisms → cellular organisms → Bacteria → Proteobacteria67902Open in IMG/M
3300005327|Ga0070658_11106072All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005329|Ga0070683_100252790Not Available1676Open in IMG/M
3300005331|Ga0070670_100106108All Organisms → cellular organisms → Bacteria → Proteobacteria2420Open in IMG/M
3300005332|Ga0066388_100656579All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300005335|Ga0070666_10043344All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3013Open in IMG/M
3300005335|Ga0070666_10497196Not Available884Open in IMG/M
3300005434|Ga0070709_10782125Not Available748Open in IMG/M
3300005437|Ga0070710_11367784Not Available528Open in IMG/M
3300005455|Ga0070663_101097626All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300005455|Ga0070663_101211867Not Available664Open in IMG/M
3300005471|Ga0070698_101187124Not Available712Open in IMG/M
3300005529|Ga0070741_10247665All Organisms → cellular organisms → Bacteria → Proteobacteria1699Open in IMG/M
3300005535|Ga0070684_100526339Not Available1096Open in IMG/M
3300005539|Ga0068853_102153773Not Available541Open in IMG/M
3300005542|Ga0070732_10860481Not Available553Open in IMG/M
3300005544|Ga0070686_100421882All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter1019Open in IMG/M
3300005548|Ga0070665_100007209All Organisms → cellular organisms → Bacteria → Proteobacteria11299Open in IMG/M
3300005548|Ga0070665_100202969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae1983Open in IMG/M
3300005616|Ga0068852_102482745Not Available538Open in IMG/M
3300005618|Ga0068864_101445202Not Available690Open in IMG/M
3300005719|Ga0068861_101692193Not Available625Open in IMG/M
3300005842|Ga0068858_100023927All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5691Open in IMG/M
3300005844|Ga0068862_100038495All Organisms → cellular organisms → Bacteria → Proteobacteria4056Open in IMG/M
3300006893|Ga0073928_10305944All Organisms → cellular organisms → Bacteria → Proteobacteria1192Open in IMG/M
3300009093|Ga0105240_10029529All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7142Open in IMG/M
3300009093|Ga0105240_10344012All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300009143|Ga0099792_10102130All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300009174|Ga0105241_10146339All Organisms → cellular organisms → Bacteria → Proteobacteria1928Open in IMG/M
3300009174|Ga0105241_12533745Not Available514Open in IMG/M
3300009177|Ga0105248_10348877All Organisms → cellular organisms → Bacteria1666Open in IMG/M
3300009545|Ga0105237_10382572All Organisms → cellular organisms → Bacteria → Proteobacteria1412Open in IMG/M
3300009545|Ga0105237_10683324All Organisms → cellular organisms → Bacteria → Proteobacteria1033Open in IMG/M
3300009551|Ga0105238_10611838All Organisms → cellular organisms → Bacteria → Proteobacteria1098Open in IMG/M
3300009551|Ga0105238_12200080Not Available586Open in IMG/M
3300010375|Ga0105239_11996727All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300010877|Ga0126356_10188210Not Available507Open in IMG/M
3300012357|Ga0137384_11243038Not Available590Open in IMG/M
3300012359|Ga0137385_10088602All Organisms → cellular organisms → Bacteria → Proteobacteria2746Open in IMG/M
3300012922|Ga0137394_10847142Not Available765Open in IMG/M
3300012924|Ga0137413_10716299Not Available761Open in IMG/M
3300012927|Ga0137416_10134220All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300012929|Ga0137404_10442966Not Available1151Open in IMG/M
3300012930|Ga0137407_10151035All Organisms → cellular organisms → Bacteria → Proteobacteria2052Open in IMG/M
3300012930|Ga0137407_10844726All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter865Open in IMG/M
3300012944|Ga0137410_10359293All Organisms → cellular organisms → Bacteria → Proteobacteria1166Open in IMG/M
3300013105|Ga0157369_10413117Not Available1399Open in IMG/M
3300013306|Ga0163162_11018347All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300014325|Ga0163163_10865771Not Available967Open in IMG/M
3300014968|Ga0157379_10315624All Organisms → cellular organisms → Bacteria → Proteobacteria1426Open in IMG/M
3300014968|Ga0157379_11052623Not Available778Open in IMG/M
3300014969|Ga0157376_12280948Not Available580Open in IMG/M
3300015242|Ga0137412_10038240All Organisms → cellular organisms → Bacteria3919Open in IMG/M
3300015264|Ga0137403_10061789All Organisms → cellular organisms → Bacteria → Proteobacteria3826Open in IMG/M
3300015264|Ga0137403_10082576All Organisms → cellular organisms → Bacteria → Proteobacteria3245Open in IMG/M
3300018482|Ga0066669_12263396Not Available517Open in IMG/M
3300019270|Ga0181512_1047859Not Available579Open in IMG/M
3300019789|Ga0137408_1475013All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300020140|Ga0179590_1201848Not Available545Open in IMG/M
3300021168|Ga0210406_10150076All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1957Open in IMG/M
3300021168|Ga0210406_10762120All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria740Open in IMG/M
3300021170|Ga0210400_11010147Not Available676Open in IMG/M
3300021388|Ga0213875_10606299Not Available529Open in IMG/M
3300021477|Ga0210398_10933990Not Available694Open in IMG/M
3300022726|Ga0242654_10107724All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → Candidatus Gallionella acididurans884Open in IMG/M
3300022894|Ga0247778_1225470Not Available529Open in IMG/M
3300022910|Ga0247768_1008586All Organisms → cellular organisms → Bacteria → Proteobacteria3451Open in IMG/M
3300024288|Ga0179589_10427119Not Available609Open in IMG/M
3300025321|Ga0207656_10516497All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300025900|Ga0207710_10071373Not Available1593Open in IMG/M
3300025906|Ga0207699_11074731Not Available596Open in IMG/M
3300025911|Ga0207654_10904894All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria640Open in IMG/M
3300025913|Ga0207695_10063815Not Available3795Open in IMG/M
3300025913|Ga0207695_11762988Not Available500Open in IMG/M
3300025914|Ga0207671_10015413All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5983Open in IMG/M
3300025914|Ga0207671_10300412All Organisms → cellular organisms → Bacteria → Proteobacteria1268Open in IMG/M
3300025914|Ga0207671_10378832All Organisms → cellular organisms → Bacteria → Proteobacteria1124Open in IMG/M
3300025914|Ga0207671_10506503All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300025914|Ga0207671_11099597Not Available624Open in IMG/M
3300025924|Ga0207694_11697341All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria532Open in IMG/M
3300025925|Ga0207650_10346675All Organisms → cellular organisms → Bacteria → Proteobacteria1221Open in IMG/M
3300025933|Ga0207706_10726342Not Available847Open in IMG/M
3300025936|Ga0207670_11617524Not Available551Open in IMG/M
3300025949|Ga0207667_10582150All Organisms → cellular organisms → Bacteria → Proteobacteria1130Open in IMG/M
3300025981|Ga0207640_12111536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia511Open in IMG/M
3300026095|Ga0207676_11279006All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300027727|Ga0209328_10080709Not Available994Open in IMG/M
3300027903|Ga0209488_10104711All Organisms → cellular organisms → Bacteria2123Open in IMG/M
3300028379|Ga0268266_10030468All Organisms → cellular organisms → Bacteria → Proteobacteria4584Open in IMG/M
3300028380|Ga0268265_10015370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5238Open in IMG/M
3300028536|Ga0137415_10000168All Organisms → cellular organisms → Bacteria → Proteobacteria55772Open in IMG/M
3300028536|Ga0137415_10757842All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter782Open in IMG/M
3300030521|Ga0307511_10001702All Organisms → cellular organisms → Bacteria → Proteobacteria23150Open in IMG/M
3300030521|Ga0307511_10014028All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales7803Open in IMG/M
3300031057|Ga0170834_111579392Not Available791Open in IMG/M
3300031231|Ga0170824_100352982All Organisms → cellular organisms → Bacteria → Proteobacteria793Open in IMG/M
3300031231|Ga0170824_109238339All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300031231|Ga0170824_116437302Not Available817Open in IMG/M
3300031231|Ga0170824_125317190Not Available585Open in IMG/M
3300031469|Ga0170819_17704562All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300031474|Ga0170818_113447496All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300031507|Ga0307509_10000677All Organisms → cellular organisms → Bacteria → Proteobacteria58093Open in IMG/M
3300031616|Ga0307508_10264590Not Available1314Open in IMG/M
3300031616|Ga0307508_10476528Not Available842Open in IMG/M
3300031720|Ga0307469_10846689All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter843Open in IMG/M
3300031726|Ga0302321_100233502All Organisms → cellular organisms → Bacteria → Proteobacteria1939Open in IMG/M
3300031726|Ga0302321_101032137All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300031962|Ga0307479_11401574All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300031996|Ga0308176_12782136Not Available520Open in IMG/M
3300032828|Ga0335080_12404639All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300032955|Ga0335076_10485206All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300032955|Ga0335076_11410012Not Available583Open in IMG/M
3300033180|Ga0307510_10000007All Organisms → cellular organisms → Bacteria → Proteobacteria558582Open in IMG/M
3300033180|Ga0307510_10027094All Organisms → cellular organisms → Bacteria → Proteobacteria6575Open in IMG/M
3300034384|Ga0372946_0142715Not Available1141Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere15.13%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil5.88%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza5.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.04%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.52%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.68%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.68%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.68%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.84%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.84%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003316Sugarcane root Sample L1Host-AssociatedOpen in IMG/M
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300005238Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005260Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022894Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5EnvironmentalOpen in IMG/M
3300022910Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10007208033300002245Forest SoilMGPDPIWPKGESERFMQSELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEEGSRHDDYRHAGAGTAFRFHITCYAVWQLECADDETAIGPENAD*
rootH1_1004534523300003316Sugarcane Root And Bulk SoilMSSSEQQLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPESDAGARPAFKFHITCHDAWQLECGLDEPFVPRAPAEGQGGQSEQNFARPLRE*
rootH2_1001128223300003320Sugarcane Root And Bulk SoilMSSSEQQLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPESDAGARPAFKFHITCHDAWQLECGLDEPFCPTGAR*
Ga0073692_102248313300005238SoilMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADCGTPGSFKFHITCHDAWQLECGLDELGAR*
Ga0074072_1000049463300005260SoilMSSSDQHLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEGDAGSRPAFKFHITCHYAWQLECGLDELDAR*
Ga0070658_1110607223300005327Corn RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGSFRFHITCHDAWQLECALDELDAR*
Ga0070683_10025279043300005329Corn RhizosphereMPRGLYLQRTARESLANGRLPRVHSQCIWGGYGRGDLCSLCGEPIHATEVEFEVPEPEDGPGTGLKFHITCYAAWQLECGDEGPGPAGGT*
Ga0070670_10010610823300005331Switchgrass RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECG*
Ga0066388_10065657913300005332Tropical Forest SoilMPRELYLKRTARESLASGRLPRMHSQCIWGGYGRGDRCSLCGEPIRTTEVEFEVPESEDSRGAGFRFHITCHAVWQLECADEGPAAG*
Ga0070666_1004334433300005335Switchgrass RhizosphereMITELYLQQTARERLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESEEDGLHPGHRHPAPGALKFHITCHAVWQLECADDETAAMPENTD*
Ga0070666_1049719613300005335Switchgrass RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLEC
Ga0070709_1078212513300005434Corn, Switchgrass And Miscanthus RhizosphereMPRELYLQRTARESLASGRLPRIHSQCIWGGYGRGDRCSLCGEPIRSSEVEFEVPEREDGTGMPSLKFHITCHAVWQLECTDGGATAGP*
Ga0070710_1136778413300005437Corn, Switchgrass And Miscanthus RhizosphereMPREQYLQRTARESLASGRLPRIHSQCIWGGYGRGDRCSLCGEPIRSTEVEFEVPEREDGTGMPSLKFHITCHAVWQLECTDGGATAGP*
Ga0070663_10109762623300005455Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGTG*
Ga0070663_10121186713300005455Corn RhizosphereSGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELDAR*
Ga0070698_10118712413300005471Corn, Switchgrass And Miscanthus RhizosphereMQSELYLQRTARERLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEDGGRHADHWQAAPATALKFHITCHAVWQLECGDAATATGPENTD*
Ga0070741_1024766523300005529Surface SoilMPREVYLQRTARECLESGRLPRIQSHCIWGGYGKGDTCSLCGEPIRSTEVEFEVPEPEDGTSRGLKFHITCHAVWQLECADEAGGAAI*
Ga0070684_10052633923300005535Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECGLES*
Ga0068853_10215377313300005539Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELDAR*
Ga0070732_1086048113300005542Surface SoilQYLQRTARESLASGRLPRMHSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPEEGAGSSFKFHITCHAVWQLECAGEGASAAGA*
Ga0070686_10042188213300005544Switchgrass RhizosphereELYLQQTARERLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESEEDGLHPGHRHPAPGALKFHITCHAVWQLECADDETAAMPENTD*
Ga0070665_100007209103300005548Switchgrass RhizosphereMSMEQRLQQAARVCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVPEGTWGMHSAFKFHITCHDAWQLECAFDDGRRADDDRAR*
Ga0070665_10020296913300005548Switchgrass RhizosphereMSTMEQRLQRAARDCLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECG*
Ga0068852_10248274513300005616Corn RhizosphereACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELDAR*
Ga0068864_10144520213300005618Switchgrass RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGCFKFHITCHDAWQLECALDELDAR*
Ga0068861_10169219323300005719Switchgrass RhizosphereASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESEEDGLHPGHRHPAPGALKFHITCHAVWQLECADDETAAMPENTD*
Ga0068858_10002392733300005842Switchgrass RhizosphereMSTMEQRLQRAARDCLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPGFKFHITCHDAWQLECGLDEERV*
Ga0068862_10003849513300005844Switchgrass RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGCFRFHITCHDAWQLECALDELDAR*
Ga0073928_1030594423300006893Iron-Sulfur Acid SpringMPTEIYLQRTARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAAAGATAFKFHITCHDAWQLECALDEPAQEPV*
Ga0105240_1002952923300009093Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELGAR*
Ga0105240_1034401223300009093Corn RhizosphereMPRELYLHRTAREHLANGRLPRIQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPDDSPGSCLKFHIACHAIWQSECA*
Ga0099792_1010213023300009143Vadose Zone SoilMITELYLQRTARECLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESAEDGLHAPHRHPAPAAAGALKFHITCHAVWQLECADDETATTPENTD*
Ga0105241_1014633923300009174Corn RhizosphereMSTTEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRQAFKFHITCHDAWQLECGLDELDAR*
Ga0105241_1253374523300009174Corn RhizosphereRACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGAAGTRPAFKFHITCHDAWQLECGLES*
Ga0105248_1034887723300009177Switchgrass RhizosphereMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGTG*
Ga0105237_1038257223300009545Corn RhizosphereMSTMEQRLQRAARSCLASGRLPRVQSQCIWGGYGRGDVCALCGDPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGL*
Ga0105237_1068332423300009545Corn RhizosphereMSTEQRLQHAARAGLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVTEAGGGGTRPAFKFHITCHEAWQLECGMG*
Ga0105238_1061183823300009551Corn RhizosphereMSTEQRLQHAARAGLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVIEAGGGGTRPAFKFHITCHEAWQLECGMG*
Ga0105238_1220008023300009551Corn RhizosphereGMPRELYLQRTARESLASGRLPRIHSQCIWGGYGRGDRCSLCGEPIRSTEVEFEVPEREDGTGMPSLKFHITCHAVWQLECTDGGATAGP*
Ga0105239_1199672723300010375Corn RhizosphereRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGTG*
Ga0126356_1018821013300010877Boreal Forest SoilTRGSISEIDRSGTMPTELCLQRTARDCLASGRLPRVHSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAAGMAFKFHITCHAAWQIECALDEPLSAR*
Ga0137384_1124303813300012357Vadose Zone SoilMHSQSIWGGYGRGDTCSLCGEPIRSTEVEFEVPEPEEGWRSAIPRHATPGVGFRFHITCHAIWQLECADDEKAAGTAA*
Ga0137385_1008860213300012359Vadose Zone SoilMPRELYLQRTARECLENGWLPRMHSQCIWGGYGRGDTCSLCGEPIRSTEVEFEVPEPEEGWRSATPRHATPGVGFRFHITCHAIWQLECADDEKAAGTAA*
Ga0137394_1084714223300012922Vadose Zone SoilMITELYLQRTARECLASGRLPRMHSQHIWGGYGRGDVCSLCGEPIRSTEVEFEVPESAEDRLHAAHRHPAPAAPGALKFHITCHAIWQLECADDETATTPENTD*
Ga0137413_1071629923300012924Vadose Zone SoilMPRELYLQRAARECLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEARDRPTDHWHRAPGAALKFHITCHAIWQLEC
Ga0137416_1013422023300012927Vadose Zone SoilMPRELYLQRAARECLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEAADGDGHPDHHHSAPGTALKFHITCHAVWQLECADDETAAVPENSD*
Ga0137404_1044296623300012929Vadose Zone SoilMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEAAALHADHWQTTLGTALKFHITCHAVWQLECADEQTAVGAENSD*
Ga0137407_1015103523300012930Vadose Zone SoilMPRELYLQRTARECLENGRLPRMQSQCIWGGYGRGDICSLCAEPIRSTEVEFEVPEPADGWPQAAARHVATRNAEPGTAFKFHITCHAVWQLECAQDDKASGTPI*
Ga0137407_1084472623300012930Vadose Zone SoilRELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEAAGLHADPWQTAPGTALIFHITCHAVWQLECADERTAAGAENSD*
Ga0137410_1035929323300012944Vadose Zone SoilMSTPELRLQRAARACLANGRLPRVHSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAAGMAFRFHITCHAAWQLECGLDAR*
Ga0157369_1041311723300013105Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGAAGTRPSFKFHITCHDAWQLECGLDELDAR*
Ga0163162_1101834723300013306Switchgrass RhizosphereMPRELYLQRTARERLASGRLPRMQSQCIWGGYGRGDVCSLCGEPIRTTEVEFEVPEPEEAHGAALKLHSGLKFHITCHAIWQMECTDEGASAGQ*
Ga0163163_1086577113300014325Switchgrass RhizosphereQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECGLES*
Ga0157379_1031562413300014968Switchgrass RhizosphereRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELDAR*
Ga0157379_1105262313300014968Switchgrass RhizosphereMPRELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPDAAELRADHWQTAPGTALKFHITCHAVWQLECADEQTAVRAENSD*
Ga0157376_1228094813300014969Miscanthus RhizosphereMPTPEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGSFRFHITCHDAWQLECALDELDAR*
Ga0137412_1003824013300015242Vadose Zone SoilMSTPELRLQRAARACLANGRLPRVHSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAAGMAFRFHITCHAAWQLECGLDELGA*
Ga0137403_1006178923300015264Vadose Zone SoilMPRELYLQRTARECLENGRLPRMQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPADGWPQAATRHVATRNAEPGTAFKFHITCHAVWQLECAQDDKASGTPI*
Ga0137403_1008257623300015264Vadose Zone SoilMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEAAALHADHWQTALGTALKFHITCHAVWQLECADEQTAVGAENSD*
Ga0066669_1226339623300018482Grasslands SoilMSTPEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPETDSGTRPAFKFHITCHDVWQLECGLDELDAH
Ga0181512_104785923300019270PeatlandMSISEQHLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGLDELDAR
Ga0137408_147501313300019789Vadose Zone SoilMPRELYLQRTARECLENGRLPRMQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPADGWPQAATRHVATRNAEPGTAFKFHITCHAVWQLECVQDDKASGTPI
Ga0179590_120184813300020140Vadose Zone SoilMSIRAIEESLMSTPEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPETDSGTQPAFKFHITCHDVWQLECALDELDAH
Ga0210406_1015007613300021168SoilMPTEIYLQRTARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAAAGGMAFKFHITCHDAWQLECALDEPAQAPG
Ga0210406_1076212023300021168SoilMPKEIYLQRTARDCLATGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDATGGGVAFKFHITCHDAWQLECALDEPDRLPVKGTGQ
Ga0210400_1101014713300021170SoilMLSEFHLQRTARERLASGRLPRRHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEDAGQHDGYSHAAPAAALKFHITCHAVWQLECAGDDAAPRPRQNAGHGG
Ga0213875_1060629923300021388Plant RootsMSTTEQRLQRAARAGLDSGRLPRVQSQCIWGGYGRGDVCALCGEPIRSHEVEFEVPEDDSGARPAFKFHITCHDAWQLECGLDELNAR
Ga0210398_1093399023300021477SoilMPTEFYLQRTARDCLASGRLPRVHSQCIWGGYGRGDVCSLCAQPIRSNEVEFEVPEDAAAGGLAFRFHITCHAAWQLECALDESSDTR
Ga0242654_1010772423300022726SoilMPTEIYLQRTARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAAAGGMAFKFHITCHDAWQLECALDESVQAPG
Ga0247778_122547013300022894Plant LitterMSTEKHLQRAARACLATGRLPRVQSNCIWGGYGRGDVCSLCGEPIRSNEVEFEVGEAGKSLVFKFHITCHDAWQVECGLDELDAR
Ga0247768_100858623300022910Plant LitterMSTEKHLQRAARACLASGRLPRVQSNCIWGGYGRGDVCSLCGEPIRSNEVEFEVGEAGKSLVFKFHITCHDAWQMECGLDELDAR
Ga0179589_1042711913300024288Vadose Zone SoilMSTPEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPETDSGTRPAFKFHITCHDVWQLECALDELDAH
Ga0207656_1051649723300025321Corn RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGSFRFHITCHDAWQLECALDELDAR
Ga0207710_1007137323300025900Switchgrass RhizosphereMSTMEQRLQRAARDCLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPGFKFHITCHDAWQLECGLDEERV
Ga0207699_1107473113300025906Corn, Switchgrass And Miscanthus RhizosphereMPRELYLQRTARESLASGRLPRIHSQCIWGGYGRGDRCSLCGEPIRSSEVEFEVPEREDGTGMPSLKFHITCHAVWQLECTDGGATAGP
Ga0207654_1090489413300025911Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGAAGTRPSFKFHITCHDAWQLECGLDELDAR
Ga0207695_1006381513300025913Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELDAR
Ga0207695_1176298813300025913Corn RhizosphereMPRELYLHRTAREHLANGRLPRIQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPDDSPGSCLKFHIACHAIWQSECA
Ga0207671_1001541353300025914Corn RhizosphereMSTVEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGAAGTRPAFKFHITCHDAWQLECGLDELEAR
Ga0207671_1030041223300025914Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECGLES
Ga0207671_1037883223300025914Corn RhizosphereMSTEQRLQHAARAGLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVTEAGGGGTRPAFKFHITCHEAWQLECGMG
Ga0207671_1050650323300025914Corn RhizosphereMSTMEQRLQRAARSCLASGRLPRVQSQCIWGGYGRGDVCALCGDPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGL
Ga0207671_1109959713300025914Corn RhizosphereMPRELYLHRTAREHLANGRLPRIQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPDDSPGSCLKFHIACHAIWQSE
Ga0207694_1169734113300025924Corn RhizosphereAARAGLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVIEAGGGGTRPAFKFHITCHEAWQLECGMG
Ga0207650_1034667523300025925Switchgrass RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECG
Ga0207706_1072634223300025933Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGTRPAFKFHITCHDAWQLECGTG
Ga0207670_1161752413300025936Switchgrass RhizosphereQPMGHTPDLADRRRRRSMITELYLQQTARERLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESEEDGLHPGHRHPAPGALKFHITCHAVWQLECADDETAAMPENTD
Ga0207667_1058215023300025949Corn RhizosphereMSTMEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGASGTRPAFKFHITCHDAWQLECETGELGAR
Ga0207640_1211153623300025981Corn RhizosphereTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGSFRFHITCHDAWQLECALDELDAR
Ga0207676_1127900623300026095Switchgrass RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGCFKFHITCHDAWQLECALDELDAR
Ga0209328_1008070913300027727Forest SoilMGPDPIWPKGESERFMQSELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEEGSRHDDYRHAGAGTAFRFHITCYAVWQLECADDETAIGPENAD
Ga0209488_1010471123300027903Vadose Zone SoilMITELYLQRTARECLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPESAEDGLHAPHRHPAPAAAGALKFHITCHAVWQLECADDETATTPENTD
Ga0268266_1003046843300028379Switchgrass RhizosphereMSMEQRLQQAARVCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVPEGTWGMHSAFKFHITCHDAWQLECAFDDGRRADDDRAR
Ga0268265_1001537013300028380Switchgrass RhizosphereMSTTEQRLLRAARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEADSGTLGCFRFHITCHDAWQLECALDELDAR
Ga0137415_10000168333300028536Vadose Zone SoilMSTPELRLQRAARACLANGRLPRVHSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAAGMAFRFHITCHAAWQLECGLDELDA
Ga0137415_1075784213300028536Vadose Zone SoilDPTWPKGESEPFMPRELYLQRAARECLASGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEARDRPTDHWHRAPGAALKFHITCHAIWQLECTDGETATGPEDTD
Ga0307511_10001702103300030521EctomycorrhizaMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPEAAALHPDHWQTALGTALKFHITCHAVWQLECADEQTAVGAENSD
Ga0307511_1001402853300030521EctomycorrhizaMPTELCLQRTARDCLASGRLPRVHSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAAGMAFKFHITCHAAWQIECAFDEPLSAR
Ga0170834_11157939223300031057Forest SoilMPTEIYLQRTARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEAAAAGGMAFKFHITCHDAWQLECALDEPAQAPG
Ga0170824_10035298213300031231Forest SoilMSTTEQHLQRTARACLASGRLPRVHSQCIWGGYGRGEVCSLCGEPIRSNEVEFEVPEDAASPGTAFKFHITCHAAWQVECGLDEPQ
Ga0170824_10923833913300031231Forest SoilIHLQRTARDCLASGRLPRVQTQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAGSMTFKFHITCHDVWQLECALDEPAQVR
Ga0170824_11643730213300031231Forest SoilMHTETHLQRAARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAAAGGVAFKFHITCHDAWQLECALDEPLQVG
Ga0170824_12531719023300031231Forest SoilMPKEIYLQRTARDCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDTTGAGVAFKFHITCHDAWQLECALDEPAQAPG
Ga0170819_1770456223300031469Forest SoilPNEIHLQRTARDCLASGRLPRVQTQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAGSMTFKFHITCHDVWQLECALDEPAQVR
Ga0170818_11344749613300031474Forest SoilMPNEIHLQRTARDCLASGRLPRVQTQCIWGGYGRGDVCSLCGEPIRSNEVEFEVPEDAVAGSMTFKFHITCHDVWQLECALDEPAQVR
Ga0307509_10000677393300031507EctomycorrhizaMPRQLQLHRTARECLATGKLPRMHSQCIWGGYGHGDVCSLCGEPIRSSEVEFEVPEPEDGTGAGFRFHITCHAVWQLECAGLNPSG
Ga0307508_1026459023300031616EctomycorrhizaMPRELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPDAADLHADHWQTAPGTALKFHITCHAVWQLECADEQTAVGAENSD
Ga0307508_1047652813300031616EctomycorrhizaKDASDPFMPRELYLQRTARESLENGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPELEDNGQRDGHGHAASAAAALKFHITCHAVWQLECADDETPAGPENTD
Ga0307469_1084668923300031720Hardwood Forest SoilARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIRSTEVEFEVPEPDGAELRAAHWQTALGTALKFHITCHAVWQLECADEQTAVGAENSD
Ga0302321_10023350213300031726FenMSTEQHLQRTARACLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSNEVEFEVGAAGTRPVFKFHITCHDAWQLECGLDESDAR
Ga0302321_10103213723300031726FenRESLANGRLPRMNSQCIWGGYGKGDVCSLCGEPIRSSEVEFEVPEPEHGPGSAFRFHITCHAVWQLECADEGAHLR
Ga0307479_1140157423300031962Hardwood Forest SoilMPRELYLQRTARESLESGRLPRMHSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEPEEGAGSSFKFHITCHAVWQLECAGEGASAAGA
Ga0308176_1278213613300031996SoilMPTTEQRLQRAARACLASGRLPRVQSQCIWGGYGRGDVCALCGEPIRSNEVEFEVPEGDAGARQAFKFHITCHDAWQLECGEPAS
Ga0335080_1240463923300032828SoilLYLQRTARESLANGRLPRMQSHCIWGGYGRGETCSLCGKPIRSTEVEFEVPEAEDGTLHGFKFHITCHAVWQMECMNAQTGPNS
Ga0335076_1048520623300032955SoilMPEELSLRRAARESLANGRLPRMHSQCIWGGYGRGDTCALCGKPIRSTEVEFEVPEPEDGPGTAFKFHITCHAIWQLECGVEGAGAES
Ga0335076_1141001213300032955SoilPRCGGWWSEQVMPRELYLQRTARECLESGRLPRIQSQCIWGGYGRGDICSLCGEPIRSTEVEFEVPEAEDGAGGAFKFHITCHAVWQLECGPEATR
Ga0307510_100000074203300033180EctomycorrhizaMSTPEQRLQRAARACLASGRLPRVQSQCIWGGYGRGEVCSLCGEPIRSNEVEFEVPETDSGTRPAFKFHITCHDVWQLECGLDELDAH
Ga0307510_1002709423300033180EctomycorrhizaMSTEQRLQHAARVCLASGRLPRVQSQCIWGGYGRGDVCSLCGEPIRSHEVEFEVPEATTGGTRPAFKFHITCHDAWQLECGMG
Ga0372946_0142715_582_8903300034384SoilMPRELYLQRTARECLESGRLPRMHSQCIWGGYGRGDVCSLCGEPIGSTEVEFEVPEPEDGSRHDDYRHAAAGTAFRFHITCHAVWQLECADDETAIERENTD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.