Metagenome / Metatranscriptome Family F074477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074477
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	84 residues
Representative Sequence	LMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA
Number of Associated Samples	89
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.70 %
% of genes near scaffold ends (potentially truncated)	33.61 %
% of genes from short scaffolds (< 2000 bps)	73.95 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.076 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.210 % of family members)
Environment Ontology (ENVO)	Unclassified (33.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.80% β-sheet: 36.89% Coil/Unstructured: 56.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
b.41.1.1: Photosynthetic reaction centre, H-chain, cytoplasmic domain	d3t6eh2	3t6e	0.79913
b.41.1.2: MTH1895	d1pm3a1	1pm3	0.65083
b.41.1.4: RimM C-terminal domain-like	d2f1la1	2f1l	0.61741
f.12.1.1: Head and neck region of the ectodomain of NDV fusion glycoprotein	d1g5ga1	1g5g	0.57003
d.3.1.1: Papain-like	d2e01a1	2e01	0.56255

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13560	HTH_31	18.49
PF02325	YGGT	17.65
PF10604	Polyketide_cyc2	7.56
PF00118	Cpn60_TCP1	4.20
PF00166	Cpn10	3.36
PF13439	Glyco_transf_4	1.68
PF00496	SBP_bac_5	0.84
PF00665	rve	0.84
PF04120	Iron_permease	0.84
PF00534	Glycos_transf_1	0.84
PF01717	Meth_synt_2	0.84
PF09335	SNARE_assoc	0.84
PF07517	SecA_DEAD	0.84
PF02518	HATPase_c	0.84
PF00528	BPD_transp_1	0.84
PF07885	Ion_trans_2	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	17.65
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	4.20
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	3.36
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.84
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.84
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.84
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.84
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.84
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.84
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.11 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	70.59 %
Unclassified	root	N/A	10.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	68.07 %
Unclassified	root	N/A	10.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.68 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.07 %
Unclassified	root	N/A	10.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.84 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.07 %
Unclassified	root	N/A	10.92 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.07 %
Unclassified	root	N/A	10.92 %
Agrococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	68.07 %
Unclassified	root	N/A	10.92 %
Agrococcus lahaulensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus → Agrococcus lahaulensis	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01D3TN0	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
2170459015\|G14TP7Y02FIJ4B	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
2170459020\|G1P06HT02GQPL7	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300000956\|JGI10216J12902_101037083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300000956\|JGI10216J12902_101726656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300004156\|Ga0062589_100444556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1071	Open in IMG/M
3300004480\|Ga0062592_101372563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300005171\|Ga0066677_10350486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	845	Open in IMG/M
3300005176\|Ga0066679_10084430	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300005177\|Ga0066690_10569095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300005177\|Ga0066690_10783388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300005178\|Ga0066688_10165957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1389	Open in IMG/M
3300005178\|Ga0066688_10873913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300005180\|Ga0066685_10882327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300005181\|Ga0066678_10637532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300005329\|Ga0070683_101294961	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005436\|Ga0070713_101292492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300005436\|Ga0070713_101662763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus → Agrococcus lahaulensis	620	Open in IMG/M
3300005445\|Ga0070708_100040173	All Organisms → cellular organisms → Bacteria	4096	Open in IMG/M
3300005446\|Ga0066686_10445812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	884	Open in IMG/M
3300005451\|Ga0066681_10443977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300005467\|Ga0070706_100120217	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300005467\|Ga0070706_100200921	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300005468\|Ga0070707_100953290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	823	Open in IMG/M
3300005468\|Ga0070707_101365478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300005468\|Ga0070707_101529352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300005471\|Ga0070698_100700930	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005471\|Ga0070698_100777339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	901	Open in IMG/M
3300005471\|Ga0070698_101285696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	681	Open in IMG/M
3300005533\|Ga0070734_10421063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300005534\|Ga0070735_10293076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	981	Open in IMG/M
3300005534\|Ga0070735_10428896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	790	Open in IMG/M
3300005534\|Ga0070735_10588628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300005537\|Ga0070730_10273886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1110	Open in IMG/M
3300005537\|Ga0070730_10465127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	814	Open in IMG/M
3300005542\|Ga0070732_10010470	All Organisms → cellular organisms → Bacteria	5093	Open in IMG/M
3300005542\|Ga0070732_10116632	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005552\|Ga0066701_10081560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1855	Open in IMG/M
3300005556\|Ga0066707_10070270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2086	Open in IMG/M
3300005557\|Ga0066704_10300769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1084	Open in IMG/M
3300005557\|Ga0066704_10561424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	741	Open in IMG/M
3300005559\|Ga0066700_10058057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2404	Open in IMG/M
3300005561\|Ga0066699_11044285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300005576\|Ga0066708_10827271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300006903\|Ga0075426_10503590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	900	Open in IMG/M
3300006954\|Ga0079219_11258573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300007076\|Ga0075435_101250278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300009012\|Ga0066710_100635873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1622	Open in IMG/M
3300009012\|Ga0066710_101645554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	981	Open in IMG/M
3300009012\|Ga0066710_101850241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300009137\|Ga0066709_100744329	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300009147\|Ga0114129_11410450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	859	Open in IMG/M
3300009156\|Ga0111538_11292421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	921	Open in IMG/M
3300010038\|Ga0126315_10338967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	934	Open in IMG/M
3300010038\|Ga0126315_10876463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300010373\|Ga0134128_10593368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1233	Open in IMG/M
3300010403\|Ga0134123_11118599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	812	Open in IMG/M
3300012201\|Ga0137365_10257601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1296	Open in IMG/M
3300012201\|Ga0137365_10929102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300012204\|Ga0137374_10005377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15220	Open in IMG/M
3300012206\|Ga0137380_10471430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1108	Open in IMG/M
3300012206\|Ga0137380_10561969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1000	Open in IMG/M
3300012208\|Ga0137376_11284499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300012209\|Ga0137379_10109487	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300012209\|Ga0137379_11667772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300012210\|Ga0137378_10608910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1002	Open in IMG/M
3300012285\|Ga0137370_10406530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300012350\|Ga0137372_10117743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2206	Open in IMG/M
3300012350\|Ga0137372_10535990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300012351\|Ga0137386_10591611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300012353\|Ga0137367_10000392	All Organisms → cellular organisms → Bacteria	31737	Open in IMG/M
3300012353\|Ga0137367_10939011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300012354\|Ga0137366_10832194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300012357\|Ga0137384_10308004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1316	Open in IMG/M
3300012360\|Ga0137375_10004172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17193	Open in IMG/M
3300012363\|Ga0137390_11642664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300012371\|Ga0134022_1070516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300012372\|Ga0134037_1023353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300012376\|Ga0134032_1224601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300012532\|Ga0137373_11102031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300014745\|Ga0157377_10519395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300015371\|Ga0132258_11121662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1988	Open in IMG/M
3300015371\|Ga0132258_13513816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1073	Open in IMG/M
3300018468\|Ga0066662_11818136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300025910\|Ga0207684_10061509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3189	Open in IMG/M
3300025910\|Ga0207684_10108527	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300025922\|Ga0207646_10104173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2544	Open in IMG/M
3300025928\|Ga0207700_10622079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	962	Open in IMG/M
3300025930\|Ga0207701_10029269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5205	Open in IMG/M
3300025930\|Ga0207701_10813730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300026318\|Ga0209471_1331319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300026326\|Ga0209801_1278264	Not Available	608	Open in IMG/M
3300026331\|Ga0209267_1041641	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300026332\|Ga0209803_1055414	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300026528\|Ga0209378_1265974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300026529\|Ga0209806_1056866	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300027748\|Ga0209689_1126470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1277	Open in IMG/M
3300027842\|Ga0209580_10002961	All Organisms → cellular organisms → Bacteria	7296	Open in IMG/M
3300027842\|Ga0209580_10164160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1095	Open in IMG/M
3300027857\|Ga0209166_10396525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300027857\|Ga0209166_10397824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	715	Open in IMG/M
3300027986\|Ga0209168_10234784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	910	Open in IMG/M
3300028536\|Ga0137415_10439940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1109	Open in IMG/M
3300030990\|Ga0308178_1002170	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300031099\|Ga0308181_1010399	Not Available	1331	Open in IMG/M
3300031520\|Ga0272428_1000940	All Organisms → cellular organisms → Bacteria	65507	Open in IMG/M
3300031520\|Ga0272428_1067006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2586	Open in IMG/M
3300033181\|Ga0272431_10001181	All Organisms → cellular organisms → Bacteria	51489	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.76%
Host-Associated	Host-Associated	7.56%
Engineered	Engineered	1.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.76%
Plants	Host-Associated → Plants	7.56%
Solid Waste	Engineered → Solid Waste	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.36%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	2.52%
Grass	Engineered → Solid Waste → Grass	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	2.52%
Composting	Engineered → Solid Waste → Grass → Composting	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	2.52%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_4928780	2032320005	Soil	TATHDEQLIGAEITFGTTLIGHVEGLVRDPLSLRVRGLITSYGSNRRRVTVPMEWVTKRFLSRVELGVGARALDDLGDRVRA
4PV_04287340	2170459015	Switchgrass, Maize And Mischanthus Litter	MGAEMMFGKVPLGQVEGLVRDPITQRVRHLVTRYGKVGRRVAVPLEWVVNRSPSRLVLGVGARSLDDLAECPPFQRL
2NP_01226700	2170459020	Switchgrass, Maize And Mischanthus Litter	MFTSKAATDAQLMGAELTFGATLIGHVEGLSRDPLSQRVRRLITSYGLNRRRVGVPMEWVVKRSAERLVLAVGARSLDDLQDWAAA
JGI10216J12902_1010370831	3300000956	Soil	MGVEISFGSNLIGHVEGLVRDPLSRRVRKLITTYGTPARRVAVPMEWVAKRSASRLVLGVGTHSLDDLADRTRS*
JGI10216J12902_1017266561	3300000956	Soil	LLGAEISFGGTVLGHVEGLVRDPISHRVRRLITSYGAAGRRVGVPMEWVVKRSASRVELGVGARSLDNLGDRWPS*
JGI25382J43887_105222461	3300002908	Grasslands Soil	LLQTPTELVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA*
Ga0062589_1004445562	3300004156	Soil	MFTSTAAHDEQLLGAEISSGSTVLGHVEGLVRDPISHRVRRLITSYGATGRRVGVPIEWVVKRSASRVELGVGARSLDSLGDRWPS*
Ga0062590_1020697921	3300004157	Soil	GSTVLGHVEGLVRDPISHRVRRLITSYGATRRRVGVPVEWVVKRSASRVELGVGARSLDSLGDRWPS*
Ga0062592_1013725632	3300004480	Soil	MFTSTAAHDEQLLGAEISSGSTVLGHVEGLVRDPISHRVRRLITSYGATGRRVGVPVEWVVKRSASRVELGVGARSLDSLGDRWPS*
Ga0066677_103504862	3300005171	Soil	MGAEITFGATLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA*
Ga0066679_100844301	3300005176	Soil	MFSSAATNDELLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA*
Ga0066690_105690951	3300005177	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSGSRLALAVGARSLNDLCDLAPA*
Ga0066690_107833881	3300005177	Soil	MFSSVATNDEQLVGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLSDLAPASPAAAHQA*
Ga0066688_101659574	3300005178	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA*
Ga0066688_108739131	3300005178	Soil	MFSSVATNDEQLVGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGV
Ga0066685_108823272	3300005180	Soil	DELLMGAEITFGTTLIGHVEGLLRDPISQRVRRLITSYGLKRRRVGVPMEWVVKRSTSRLVLGVGARSLDDLCDLAPA*
Ga0066678_106375321	3300005181	Soil	MFSSVATNDEQLVGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA*
Ga0070683_1012949613	3300005329	Corn Rhizosphere	MVTSTELQDDELLGADITIGSTLVGQVEGLARDPISQRVRRLITTYGQTGRRVGVPMEWVASRSTDRLVLGVGLRSLDDLRDWTAA*
Ga0070713_1012924922	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFTSKTADDAQLMNAELTFGSTLLGHVEGLIRDPISQRVRRLVTSYGRTGRRVGVPMEWVVSRSPSRLVLAVGVRSLDDLQDWAPA
Ga0070713_1016627631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TKDGQLMGLEIRFGSTLIGQVEGLARDPISQRVRRLITSYGPGRRRVGVPMEWVVKRSAERLVLGVGVRSLDDLADWTRA*
Ga0070708_1000401733	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFASTAMIDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVEVPMEWVINRSPSRLVLGVGARSLDDLPARNESR*
Ga0066686_104458121	3300005446	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSTSRLVLGVGARSLDDL
Ga0066681_104439772	3300005451	Soil	MGAEITFGTTLIGHVEGLLRDPISQRVRRLITSYGLKRRRVGVPMEWVVKRSTSRLVLGVGARSLDDLCDLAPA*
Ga0070706_1001202173	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVEVPMEWVINRSPSRLVLGVGARSLDDLPARNESR*
Ga0070706_1002009213	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTNDTQLMGAEMTFDKNLIGHVEGLVRDPISQRVRRLITSYGMSGRRVAVPMEWVVNRASSRLVLGVGARSLDDLNDWVRG*
Ga0070707_1009532901	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSVVANDTQLMGAEITFGKALIGHVEGLVRDPISHRVWRLITSYGLTPRRVAVPMEWVVNRSPSRLVLGVG
Ga0070707_1013654782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTNDTQLMGAEMTFDKNLIGYVEGLVRDPISQRVRRLITSYGMSGRRVAVPMEWVVNRASSRLVLGVGARSLDDLNDWVRG*
Ga0070707_1015293521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSASTATNDTQLMGSEITFGTTLIGHVEGLVRDPISQRVRRLITSYGMAGRRVAVPMEWVVSRAPSRLVIGVGARSLNDLADWAWA*
Ga0070698_1007009302	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MFASTAMSDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVEVPMEWVINRSPSRLVLGVGARSLDDLPARNESR*
Ga0070698_1007773391	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AASPASRAIRHGSDSAMTTNDTQLMGAEMTFDKNLIGHVEGLVRDPISRRVRRLITSYGMSGRRVAVPMEWVVNRASSRLVLGVGARSLDDLNDWVRG*
Ga0070698_1012856962	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSVVANDTQLMGAEITFGKALIGHVEGLVRDPISHRVWRLITSYGLTPRRVAVPMEWVVNRSPSRLVLGVGTRSLDCLHDWARA*
Ga0070734_104210631	3300005533	Surface Soil	MSADDRQLMGAEITFDKTLLGHVEGLGRDPISHRVWRLITSYGESRRRVGVPMEWVINRSPTRLTLAVGARSLDDLSDWTAS*
Ga0070735_102930762	3300005534	Surface Soil	MFNSTVANDAHLVGAEMTFGKTLIGHVEGLVRDPISQRVRRLITSYGPTGRRVGVPMEWVVSRSPTRLVLAVGTRSMDDLSEWTPA*
Ga0070735_104288961	3300005534	Surface Soil	VGELTPMFRSTPTNDEQLMGAQIVFGDTLIGHVEGLGRDPLSHRVWRLITSYGSGRRVGVPMEWVIKRSPSRVVIGVGERSLNDLVDWLGPEMPSQT*
Ga0070735_105886281	3300005534	Surface Soil	MLKSAAAHDDQLVGAEITFGTTLIGHVEGLVRDPISRRVRGLITSYGLKRRRVAVPMEWVTKRSDSGVVLAVSARSLDDLSDRSPP*
Ga0070730_102738862	3300005537	Surface Soil	MFTSKAADDAQLMGAELTFGSTLIGHVEGLAYDPISHRVRRLITSYGSNKRRVGVPMEWVVKRSAERLVLAVGARSLDDLQDWTSA*
Ga0070730_104651272	3300005537	Surface Soil	LQTHTEVVATPSRTSVADSQLMGAEISFGSTLIGHVEALAYDPISHRVRRLITSYGPNRRRVEVPMEWVIKRSADRLVLAVGARSLDDLQDWAPA*
Ga0070732_100104706	3300005542	Surface Soil	MFTSTLTNDSQLMGAEISFGSTLIGHVEGLIRDPISLRVRRLVTSYGLHGRRVGIPMEWVVKRSAERLALGVGVRSLDDLQEWASA*
Ga0070732_101166323	3300005542	Surface Soil	LRTHPDVDGTPANDGQLMGAEIIFGKTLIGHVEGLARDPVSQRVWRLITSYGASGRRVGVPMDWVVNRSPTRLTLAVGARSLDDLSDWTYP*
Ga0066701_100815603	3300005552	Soil	MFSSVATNDEQLVGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA*
Ga0066661_100647011	3300005554	Soil	GRLLQTPTELVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA*
Ga0066707_100702702	3300005556	Soil	MFSSAATNDELLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLSDLAPASPAAAHQA*
Ga0066704_103007691	3300005557	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDD
Ga0066704_105614241	3300005557	Soil	MFSSAATNDELLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDD
Ga0066700_100580573	3300005559	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA*
Ga0066699_110442851	3300005561	Soil	MGAEITFGTTVIGHVERLLRDRVSQRVRRVITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDL
Ga0066705_104310261	3300005569	Soil	LQILTEVVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSTSRLVLGVGARSLDDLHDLAPA*
Ga0066708_108272711	3300005576	Soil	AEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSGSRLELGVGARSLNDLCDLAPA*
Ga0075426_105035902	3300006903	Populus Rhizosphere	MFTSKAADDAQLIGAELTFGATLIGHVEGLIRDPISQRVRRLITSYGLNRRRVGVPMEWVVNRSPSRLTLAAGVRSLDDLQDWAPA*
Ga0079219_112585731	3300006954	Agricultural Soil	MVTSTATRDGQLTGAEITFGSTLIGKVEGLVRDPISQRVRRLITSYGVSRRRVGVPMEWVVKRSAERLVLGVG
Ga0075435_1012502782	3300007076	Populus Rhizosphere	MFRSTATNDTQLMGAEITFGTTLIGHVEGLVRDPLSHRVRQLITSYGLARRRVGVPMEWVAKRSASRLVLGVGVRSLDDLHDWARA*
Ga0066710_1006358731	3300009012	Grasslands Soil	VSAMFTSTVTNDKQLMGAEITFGTTLIGHVEGLVRDPLSHRVRRLVTSYGLSGRRVGVPMEWVVKRSPSRLVLGVGTRSLDGLADLALA
Ga0066710_1016455543	3300009012	Grasslands Soil	MFTTTAMNDTQLVGAEMMFGKALLGHVEGLVRDPITQRVQRLVTRYGKVGRRVAVPLEWIVNRSPSRLVLGVGARSL
Ga0066710_1018502412	3300009012	Grasslands Soil	MGAEISFGTTLIGHVEGLVRDPLSHRVRKLITTYGRPARRVAVPMEWVASRSISRLVLGVGTRSLDDLADRVQA
Ga0066709_1007443292	3300009137	Grasslands Soil	MHTLTAVHDEQLMGAEISFGTTLIGHVEGLVRDPLSHRVRKLITTYGLPARRVAVPMEWVASRSISRLVLGVGTRSLDDLADRVLA*
Ga0114129_114104502	3300009147	Populus Rhizosphere	MGAEITFGTTLLGHVEGLVHDPISHRVRRVVTSYGSTRRRVGVPMEWVVKRSPSRLELAVGARSLDNLADRTAT*
Ga0111538_112924211	3300009156	Populus Rhizosphere	MFTSTAAHDDQLLGAEISSGSTVLGHVEGLVRDPISHRVRRLITSYGATGRRVGVPMEWVVKRSASRVELGVGDRSLDSLGDRWPS*
Ga0126315_103389672	3300010038	Serpentine Soil	MGAEITFGTTLLGHVEGLVRDPISQRVRRLITTYGLTQRRVGVPIEWVIKRSASRLALGVGARSLDDLGDLAH*
Ga0126315_108764631	3300010038	Serpentine Soil	MGAEITFGTTLIGRVEGLVRDPLSKRVRKLITTYGTPVARRVAVPLEWVAKRSASLVLGVGTRSLDDLADRVLA*
Ga0126315_111060091	3300010038	Serpentine Soil	AQKGRLLHISTEVLATPARSAATNDQVLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLPPASPAAAH*
Ga0134128_105933681	3300010373	Terrestrial Soil	MATSTATKDGQLMGAEIRFGSTLIGHVQGLSRDPISQRVRRLITSYGPGGRRVGVPMEWVVKRSAERLVLGVGVRSLDDLADWTPA*
Ga0134123_111185991	3300010403	Terrestrial Soil	LVTHTDEQLMGAELTFGSTRIGHVEGLVLDPISQRVRRLITSYGLAGRRVAVPIEWVVKRSAARLVLGVGTRSLDDLSERLPA*
Ga0137365_102576014	3300012201	Vadose Zone Soil	MGAEIRFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSSSRLVLGVGARSLDDLCDLAPA*
Ga0137365_109291021	3300012201	Vadose Zone Soil	ATFTSAPTNDELLMGAEIRFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVRRSASRLVLGVGARSLDDLCDLAPA*
Ga0137374_100053776	3300012204	Vadose Zone Soil	MFTSTAAHDEQLMGAEITFGTTLIGHVEGLVRDPLSQRVRRLITSYGLTERRVAVPMEWVAKRSASRLVLGVGARSLDDLADRTRS*
Ga0137380_104714304	3300012206	Vadose Zone Soil	SDNAMTTNDTQLMGAEMTFDKTLIGHVEGLVCDPISQRVRRLITSYGMTGRRVAVPMEWVVHRAPSRLVLGVGARSLDDLNDWVRV*
Ga0137380_105619691	3300012206	Vadose Zone Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSSSRLVLGVGARSLDDLCDLAPA*
Ga0137376_112844991	3300012208	Vadose Zone Soil	DAGGLAMFTTTAMNDTQLMGAEMMFGRALLGHVEGLVRDPITQRVRRLVTRYGKVGRRVAVPLEWVVNRSPSRLVLGVGARSLDDLAELQPLN*
Ga0137379_101094875	3300012209	Vadose Zone Soil	MIAHDTQLLGAEITFDKTLLGHIEGLVRDPISQRVRRLVTSYGLTGRRVAVPMEWVVNRSPTRLALGVGARSLDDLADWTRA*
Ga0137379_116677722	3300012209	Vadose Zone Soil	FGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVRRSASRLVLGVGARSLDDLCDLAPA*
Ga0137378_106089102	3300012210	Vadose Zone Soil	MFTTTAMNDTQLMGAEMMFGKALLGQVEGLVRDPITQRVRRLVTRYGKVGRRVAVPLEWVVNRSPSRLFLGVGARSLDDLAELQPLN*
Ga0137370_104065302	3300012285	Vadose Zone Soil	GAEITVGATLIGHVKGLLHDPVSQRVRRLITSYGPMRRRVGVPMEWVVKRSGSRLVLGVGARSLDDLCDLAPA*
Ga0137372_101177433	3300012350	Vadose Zone Soil	MGAEIMFGTTLIGHVEGLVHDPISQRVRRLITSYGSTRRRVGVPIEWVIKRSASRLELAVGARSLDNLADRTST*
Ga0137372_105359902	3300012350	Vadose Zone Soil	MNDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVAVPMEWVINRSPSRLVLGVGARSLDDLPARNESR*
Ga0137386_105916111	3300012351	Vadose Zone Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVRMEWVVKRSASRLVLGVGA
Ga0137367_1000039215	3300012353	Vadose Zone Soil	MGAEITFGTTLIGHVEGLVRDPLSQRVRRLITSYGLTERRVAVPMEWVAKRSASRLVLGVGARSLDDLADRTRS*
Ga0137367_109390111	3300012353	Vadose Zone Soil	MQTSTATRDAQLMGADITFESTPIGHVEGLVRDPLTQRVRRLITSYGPTGRRVAIPMEWIVARSGSRVELGV
Ga0137366_108321942	3300012354	Vadose Zone Soil	MFTTTAMNDTQLMGAEMMFGRALLGHVEGLVRDPITQRVRRLVTRYGKVGRRVAVPLEWVVNRSPSRLVLGVGARSLDDLAELQPLN*
Ga0137384_103080042	3300012357	Vadose Zone Soil	MFTSTAMNDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVAVPMEWVINRSPSRLVLGVGARSLDDLPARNESR*
Ga0137375_1000417220	3300012360	Vadose Zone Soil	MFTSTAAHDEQLMGAEITFGTTLIGHVEGLVRDPLSQRVRRLITSYGLTERRVAVPMEWVAKRSASRVVLGVGARSLDDLADRTRS*
Ga0137390_116426641	3300012363	Vadose Zone Soil	MFTSATTPDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMGRRVGVPMEWVVKRSTSRLVLGVGARSLDDLADLAPA*
Ga0134022_10705161	3300012371	Grasslands Soil	MGAEITFGTTLIGHVEGLLRDPISQRVRRLITSYGLKRRRVGVPMEWVVKRSTSRLVLGVGARSLDDLCDLTPA*
Ga0134037_10233531	3300012372	Grasslands Soil	MFRSTPANDAQLMGAEITYGKTLIGHVEGLIRDPISQRVRRLTTSYGPTGRRVGVPMEWVVNRFPTRVVLAVGPRSLDDLSEWSRA*
Ga0134032_12246011	3300012376	Grasslands Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSGSRLELGVGARSLNDLCDLAPA*
Ga0137373_111020311	3300012532	Vadose Zone Soil	KGGPGRSAMFTSAATNDEVLMGAEITFGTALIGYVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA*
Ga0164302_118685941	3300012961	Soil	LWRWLTLAQKGRLLQTHTELVGTQGSPVTASAAAEAHDSRLMGAEITVGTALIGHVEGLVRDPISQRVRGLITSYGLKRRRVAVPMEWVTKRSDSRAVLGVG
Ga0157377_105193952	3300014745	Miscanthus Rhizosphere	MFTSTAAHDDQLLGAEISSGSTVLGHVEGLVRDPISHRVRRLITSYGATGRRVGVPMEWVVKRSASRVELGVGARSLDSLGDRWPS*
Ga0132258_111216622	3300015371	Arabidopsis Rhizosphere	MATSAVGDEQLIGTEIAFGPTLLGHVEGLAFDPVSHRVRRLITSYGKPRRRVGVPFEWVARRSDSRLILAVGERSLDDLEDWARP*
Ga0132258_122561833	3300015371	Arabidopsis Rhizosphere	LQTHTEVVGTQGSPVTASAATTAHDNRLIGAKITIGTALIGHVEGLVRDPVSQRVRGLITSYGLKRRRVAVPMEWVTKRSDSGVVLGVGARSLDDLADRSWP*
Ga0132258_135138161	3300015371	Arabidopsis Rhizosphere	THTDEQLMGAEVTYGATLIGHVEGLVRDPISQRVRRLITSYGRADRRVAVPIEWVVKRSPARVVLGVGPRSLNDLSERLPA*
Ga0132257_1009931341	3300015373	Arabidopsis Rhizosphere	LQTHTEVVGTQGSPVTASAATAAHDNRLIGAKITIGTALIGHVEGLVRDPVSQRVRGLITSYGLKRRRVAVPMEWVTKRSDSGVVLGVGARSLDDLADRSWP*
Ga0066662_118181362	3300018468	Grasslands Soil	IGAEITFDKTLIGHVEGLARDPISQRVRRLITSYGRTGRRVGVPIEWVVNRNPTRLVLAVGARSLDDLSEWTAP
Ga0207684_100615096	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTNDTQLMGAEMTFDKNLIGHVEGLVRDPISQRVRRLITSYGMSGRRVAVPMEWVVNRASSRLVLGVGARSLNDLADWAWA
Ga0207684_101085273	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFASTAMSDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVEVPMEWVINRSPSRLVLGVGARSLDDLPARNESR
Ga0207646_101041733	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTQLMGAEMTFGKTLIGHIEGLVRDPISHRVRRLITSYGLAGRRVEVPMEWVINRSPSRLVLGVGARSLDDLPARNESR
Ga0207700_106220791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFTSKTADDAQLMNAELTFGSTLLGHVEGLIRDPISQRVRRLVTSYGRTGRRVGVPMEWVVSRSPSRLVLAVGVRSLDDLQDWAAA
Ga0207701_100292696	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MFTSTAAHDDQLLGAEISSGSTVLGHVEGLVRDPISHRVRRLITSYGAAGRRVGVPMEWVVKRSASRVELGVGARSLDSLGDRWPS
Ga0207701_108137303	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DTDEQLMGAEVTFGATLIGHVEGLVLDPISQRVRRLVTSYGRAQRRVAVPIEWIVKRSATRVVLGVGTRSLNDLSDRLPA
Ga0209055_12847121	3300026309	Soil	GRLLQTPTELVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA
Ga0209471_13313191	3300026318	Soil	MFSSAATNDELLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLSDLAPASPAAAHQA
Ga0209801_12782641	3300026326	Soil	LMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA
Ga0209802_10404354	3300026328	Soil	LQTPTELVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA
Ga0209267_10416411	3300026331	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAP
Ga0209803_10554143	3300026332	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA
Ga0209378_12659742	3300026528	Soil	HVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLSDLAPASPAAAHQA
Ga0209806_10568663	3300026529	Soil	MFSSVATNDEQLVGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPASPAAAHQA
Ga0209160_11359211	3300026532	Soil	LQTPTELVATPVTSSSAMFTSRATTDEQLMGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSASRLVLGVGARSLDDLCDLAPA
Ga0209689_11264702	3300027748	Soil	MGAEITFGTTLIGHVEGLLRDPVSQRVRRLITSYGLMRRRVGVPMEWVVKRSTSRLVLGVGARSLDDLCDLAPA
Ga0209580_100029616	3300027842	Surface Soil	MFTSTLTNDSQLMGAEISFGSTLIGHVEGLIRDPISLRVRRLVTSYGLHGRRVGIPMEWVVKRSAERLALGVGVRSLDDLQEWASA
Ga0209580_101641602	3300027842	Surface Soil	MGAEIIFGKTLIGHVEGLARDPVSQRVWRLITSYGASGRRVGVPMDWVVNRSPTRLTLAVGARSLDDLSDWTYP
Ga0209166_103965251	3300027857	Surface Soil	LQTHTEVVATPSRTSVADSQLMGAEISFGSTLIGHVEALAYDPISHRVRRLITSYGPNRRRVEVPMEWVIKRSADRLVLAVGARSLDDLQDWAPA
Ga0209166_103978241	3300027857	Surface Soil	AELTFGSTLIGHVEGLAYDPISHRVRRLITSYGSNKRRVGVPMEWVVKRSAERLVLAVGARSLDDLQDWTSA
Ga0209168_102347842	3300027986	Surface Soil	MFNSTVANDAHLVGAEMTFGKTLIGHVEGLVRDPISQRVRRLITSYGPTGRRVGVPMEWVVSRSPTRLVLAVGTRSMDDLSEWTPA
Ga0137415_104399401	3300028536	Vadose Zone Soil	NTGRVSAMFKSTVPTNDKQLMGAEITFGTTLLGHVEGLVRDPLSHRVRRLVTSYGLTGRRVGVPMEWVVKRSASRLVLGVGTRSLDDLADLALA
Ga0308178_10021704	3300030990	Soil	MPASTATPDSQLMGADITFGSTLIGHVEGLVRDPLTQRVRRLVTSYGLTGRRVAIPMEWIVKRSGSHVVLGVGVRSLDDLDERAHGSTTTAERAPEKGSRG
Ga0308181_10103991	3300031099	Soil	ADITFGSTLIGHVEGLVRDPLTQRVRRLVTSYGLTGRRVAIPMEWIVKRSGSHVVLGVGVRSLDDLDERAHGSTTTAERAPEKGSRG
Ga0272428_100094026	3300031520	Rock	MATSTAANDEPLMGAEITFGSTLIGHVEGLVRDPLSHRVWRVVTSYGPTSRQVAVPIEWVVKRSPARLVLGVGTRSLDDLGDRTRS
Ga0272428_10670064	3300031520	Rock	MTKDEQLMGAEITFGTTLIGHVEGLVRDPLSHRVWRLITSYGPAGRQVAVPMEWVIKRSASRLALGVGTRSLDDLGERTRS
Ga0272431_100011815	3300033181	Rock	MATSTAAKDQQLMGAEITFGSTLIGHVEGLVRDPLSHRVWRVVTSYGPTSRQVAVPMEWVVKRSPARLVLGVGTRSLDDLGDRTRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074477

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences