Metagenome / Metatranscriptome Family F074476

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074476
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	71 residues
Representative Sequence	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAII
Number of Associated Samples	79
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	93.28 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (76.471 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.336 % of family members)
Environment Ontology (ENVO)	Unclassified (67.227 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.303 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.61% β-sheet: 0.00% Coil/Unstructured: 32.39%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00072	Response_reg	3.36
PF04392	ABC_sub_bind	3.36
PF13545	HTH_Crp_2	0.84
PF00486	Trans_reg_C	0.84
PF00239	Resolvase	0.84
PF13565	HTH_32	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.36
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.84
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
All Organisms	root	All Organisms	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
cellular organisms	root	All Organisms → cellular organisms	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.56 %
Bradyrhizobium centrosematis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	0.84 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000651\|AP72_2010_repI_A10DRAFT_1002283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2751	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1007037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1594	Open in IMG/M
3300000955\|JGI1027J12803_106268463	Not Available	1491	Open in IMG/M
3300004463\|Ga0063356_106411602	Not Available	504	Open in IMG/M
3300005332\|Ga0066388_102023792	Not Available	1033	Open in IMG/M
3300005332\|Ga0066388_102730352	Not Available	901	Open in IMG/M
3300005467\|Ga0070706_100266524	Not Available	1599	Open in IMG/M
3300005713\|Ga0066905_100310663	Not Available	1242	Open in IMG/M
3300005713\|Ga0066905_101585983	Not Available	598	Open in IMG/M
3300005713\|Ga0066905_101802382	Not Available	564	Open in IMG/M
3300005713\|Ga0066905_101971053	Not Available	541	Open in IMG/M
3300006904\|Ga0075424_100356233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1559	Open in IMG/M
3300006937\|Ga0081243_1383665	Not Available	797	Open in IMG/M
3300009792\|Ga0126374_10742117	Not Available	743	Open in IMG/M
3300010043\|Ga0126380_11529742	Not Available	592	Open in IMG/M
3300010046\|Ga0126384_11062752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300010048\|Ga0126373_13315473	Not Available	501	Open in IMG/M
3300010358\|Ga0126370_10670102	Not Available	907	Open in IMG/M
3300010358\|Ga0126370_11715046	Not Available	605	Open in IMG/M
3300010358\|Ga0126370_12246819	Not Available	539	Open in IMG/M
3300010361\|Ga0126378_11554643	Not Available	751	Open in IMG/M
3300010361\|Ga0126378_11600776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300010361\|Ga0126378_12039814	Not Available	654	Open in IMG/M
3300010362\|Ga0126377_12165849	Not Available	632	Open in IMG/M
3300010366\|Ga0126379_12169078	Not Available	657	Open in IMG/M
3300010376\|Ga0126381_102306045	Not Available	773	Open in IMG/M
3300010376\|Ga0126381_103548171	Not Available	612	Open in IMG/M
3300010863\|Ga0124850_1002312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5560	Open in IMG/M
3300012948\|Ga0126375_11265906	Not Available	618	Open in IMG/M
3300012971\|Ga0126369_11186668	Not Available	853	Open in IMG/M
3300012971\|Ga0126369_11906887	Not Available	683	Open in IMG/M
3300012971\|Ga0126369_12092501	Not Available	654	Open in IMG/M
3300012971\|Ga0126369_12639760	Not Available	587	Open in IMG/M
3300012971\|Ga0126369_13641979	Not Available	505	Open in IMG/M
3300016270\|Ga0182036_10797370	Not Available	769	Open in IMG/M
3300016270\|Ga0182036_10976210	Not Available	697	Open in IMG/M
3300016294\|Ga0182041_11633008	Not Available	596	Open in IMG/M
3300016294\|Ga0182041_11983468	Not Available	542	Open in IMG/M
3300016319\|Ga0182033_11674774	Not Available	576	Open in IMG/M
3300016319\|Ga0182033_11756498	Not Available	562	Open in IMG/M
3300016319\|Ga0182033_11983711	Not Available	530	Open in IMG/M
3300016357\|Ga0182032_10704290	Not Available	848	Open in IMG/M
3300016357\|Ga0182032_11351933	Not Available	616	Open in IMG/M
3300016371\|Ga0182034_10671242	Not Available	879	Open in IMG/M
3300016371\|Ga0182034_10774203	Not Available	820	Open in IMG/M
3300016387\|Ga0182040_10223924	Not Available	1398	Open in IMG/M
3300016387\|Ga0182040_11209316	Not Available	636	Open in IMG/M
3300016422\|Ga0182039_11147727	Not Available	701	Open in IMG/M
3300016422\|Ga0182039_11545633	Not Available	605	Open in IMG/M
3300016445\|Ga0182038_12106745	Not Available	511	Open in IMG/M
3300021168\|Ga0210406_10505607	Not Available	955	Open in IMG/M
3300021439\|Ga0213879_10012933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1862	Open in IMG/M
3300025910\|Ga0207684_10054734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3385	Open in IMG/M
3300027874\|Ga0209465_10055761	Not Available	1898	Open in IMG/M
3300031544\|Ga0318534_10492650	Not Available	700	Open in IMG/M
3300031564\|Ga0318573_10093124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1537	Open in IMG/M
3300031572\|Ga0318515_10140599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1283	Open in IMG/M
3300031573\|Ga0310915_10548502	Not Available	820	Open in IMG/M
3300031573\|Ga0310915_11058678	Not Available	564	Open in IMG/M
3300031682\|Ga0318560_10141654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300031719\|Ga0306917_10618963	Not Available	851	Open in IMG/M
3300031719\|Ga0306917_11354904	Not Available	549	Open in IMG/M
3300031744\|Ga0306918_10126752	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300031748\|Ga0318492_10297534	Not Available	839	Open in IMG/M
3300031765\|Ga0318554_10425049	Not Available	753	Open in IMG/M
3300031765\|Ga0318554_10450665	Not Available	729	Open in IMG/M
3300031765\|Ga0318554_10644823	Not Available	595	Open in IMG/M
3300031768\|Ga0318509_10424708	Not Available	743	Open in IMG/M
3300031770\|Ga0318521_10696926	Not Available	616	Open in IMG/M
3300031777\|Ga0318543_10132884	Not Available	1086	Open in IMG/M
3300031780\|Ga0318508_1028376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300031781\|Ga0318547_10696206	Not Available	631	Open in IMG/M
3300031805\|Ga0318497_10074730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1786	Open in IMG/M
3300031819\|Ga0318568_10143969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300031819\|Ga0318568_10753966	Not Available	604	Open in IMG/M
3300031833\|Ga0310917_10123287	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300031846\|Ga0318512_10702300	Not Available	518	Open in IMG/M
3300031879\|Ga0306919_10315195	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031879\|Ga0306919_11374745	Not Available	533	Open in IMG/M
3300031896\|Ga0318551_10365689	Not Available	817	Open in IMG/M
3300031896\|Ga0318551_10643299	Not Available	613	Open in IMG/M
3300031897\|Ga0318520_10569991	Not Available	702	Open in IMG/M
3300031910\|Ga0306923_11067134	Not Available	872	Open in IMG/M
3300031910\|Ga0306923_11242910	Not Available	793	Open in IMG/M
3300031912\|Ga0306921_10300438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1879	Open in IMG/M
3300031912\|Ga0306921_10617391	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300031912\|Ga0306921_11090954	Not Available	895	Open in IMG/M
3300031912\|Ga0306921_12036284	Not Available	610	Open in IMG/M
3300031945\|Ga0310913_10531825	Not Available	834	Open in IMG/M
3300031946\|Ga0310910_10142368	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300031946\|Ga0310910_11363440	Not Available	546	Open in IMG/M
3300031954\|Ga0306926_10433611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrosematis	1620	Open in IMG/M
3300031959\|Ga0318530_10051550	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300031981\|Ga0318531_10151098	Not Available	1040	Open in IMG/M
3300032001\|Ga0306922_10010538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9034	Open in IMG/M
3300032001\|Ga0306922_12106122	Not Available	546	Open in IMG/M
3300032010\|Ga0318569_10400951	Not Available	639	Open in IMG/M
3300032025\|Ga0318507_10126677	Not Available	1080	Open in IMG/M
3300032041\|Ga0318549_10365188	Not Available	650	Open in IMG/M
3300032042\|Ga0318545_10046776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300032042\|Ga0318545_10059252	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300032043\|Ga0318556_10088221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1557	Open in IMG/M
3300032052\|Ga0318506_10126061	Not Available	1109	Open in IMG/M
3300032059\|Ga0318533_10891387	Not Available	653	Open in IMG/M
3300032063\|Ga0318504_10224932	Not Available	880	Open in IMG/M
3300032064\|Ga0318510_10298105	Not Available	671	Open in IMG/M
3300032065\|Ga0318513_10034581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	2202	Open in IMG/M
3300032065\|Ga0318513_10089346	Not Available	1430	Open in IMG/M
3300032065\|Ga0318513_10691542	Not Available	500	Open in IMG/M
3300032089\|Ga0318525_10654002	Not Available	535	Open in IMG/M
3300032091\|Ga0318577_10108694	Not Available	1302	Open in IMG/M
3300032261\|Ga0306920_100119709	All Organisms → cellular organisms → Bacteria	3911	Open in IMG/M
3300032261\|Ga0306920_102077746	Not Available	793	Open in IMG/M
3300032261\|Ga0306920_103431994	Not Available	588	Open in IMG/M
3300033289\|Ga0310914_11197004	Not Available	661	Open in IMG/M
3300033290\|Ga0318519_10403425	Not Available	814	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	1.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.32%
Plants	Host-Associated → Plants	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006937	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A10DRAFT_10022837	3300000651	Forest Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFDAVPCSY*
AP72_2010_repI_A100DRAFT_10070371	3300000837	Forest Soil	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDA
JGI1027J12803_1062684631	3300000955	Soil	MSKVENLQTTNRASPFPCVSVALVVVAMFVLSWLAAKGVRNNLETVLIFAGLCLPIFIAELRNHHNKWAIIV
Ga0063356_1064116021	3300004463	Arabidopsis Thaliana Rhizosphere	VSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIAFDAVPVI
Ga0066388_1020237923	3300005332	Tropical Forest Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHH
Ga0066388_1027303521	3300005332	Tropical Forest Soil	MSKVENVQTINRAKPLPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIF
Ga0070706_1002665246	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNYLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVIT*
Ga0066905_1003106631	3300005713	Tropical Forest Soil	MSKVETLQTTNRAKPLPCVSVALIVLAMFVSSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAII
Ga0066905_1015859831	3300005713	Tropical Forest Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFA
Ga0066905_1018023821	3300005713	Tropical Forest Soil	MSKVENLQTTDRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGY
Ga0066905_1019710532	3300005713	Tropical Forest Soil	MSKVENLQTINRAKPFPYVSVALAVLAMFILSWLAAKGVRNNLQPVLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGY
Ga0066903_1037294932	3300005764	Tropical Forest Soil	MSKVENLQTTNRANPFPCVSVALVVLATFVLSWLAAKGVRNNLETLLIFAV
Ga0075424_1003562334	3300006904	Populus Rhizosphere	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELR
Ga0081243_13836651	3300006937	Tropical Rainforest Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIA
Ga0126374_107421173	3300009792	Tropical Forest Soil	MSKVETLQTTNRAKPLPCVSVALIVLAMFVSSWLAAKGVRNNLQTLLIFAGLCSPIFIAELR
Ga0126380_115297421	3300010043	Tropical Forest Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVITYAF
Ga0126384_110627521	3300010046	Tropical Forest Soil	MSKVENLQTINRAKPFPYVSVALAVLAMFILSWLAAKGVRNNLQPVLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYA
Ga0126373_133154731	3300010048	Tropical Forest Soil	MSKVENLQTTYRAKPFPCVSVGLAVLATFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAE
Ga0126370_106701021	3300010358	Tropical Forest Soil	MSKVENLQTTNRAKPFPCVSVALAVLAMFVLGWLAAKGVRNNLQLLLIFA
Ga0126370_117150462	3300010358	Tropical Forest Soil	MSKVENLQTINRAKPFPCVSVALAVLAMLVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKW
Ga0126370_122468192	3300010358	Tropical Forest Soil	MSKVENLQTINRAKPFPYVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSP
Ga0126378_115546431	3300010361	Tropical Forest Soil	MSKVETLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFI
Ga0126378_116007762	3300010361	Tropical Forest Soil	MSKVENLQTINRAKPFPYVSVALAVLAMFILSWLAAKGVRNNLQPVLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVI
Ga0126378_120398141	3300010361	Tropical Forest Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHH
Ga0126377_121658492	3300010362	Tropical Forest Soil	MSKVETLQTTNRAKPLPCVSVALIVLAMFVSSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAI
Ga0126379_121690781	3300010366	Tropical Forest Soil	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITY
Ga0126381_1023060451	3300010376	Tropical Forest Soil	MSKVENLQTTNRANPFPCVSVALVVLAMFVLSWLEAKGVRNNLETLLIFAGLCLPIFIAELRNHHNKWTIIVFNAVPVITY
Ga0126381_1035481711	3300010376	Tropical Forest Soil	MSKVENLQTINRAKPFPCVSVALAVLAMLVLSWLAAKGVRNNLQTLLIFAGLCSPIF
Ga0124850_10023127	3300010863	Tropical Forest Soil	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYHSDILSYVARF*
Ga0126375_112659061	3300012948	Tropical Forest Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVITYAFGYLVLRGPVLTG
Ga0126369_111866682	3300012971	Tropical Forest Soil	MSKVENLQTINRAKPFPCVSVALAVLAMLVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWPIIVFNAVPVITYAFGYLVLRGRF*
Ga0126369_119068871	3300012971	Tropical Forest Soil	MSRVENLQTTSRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRN
Ga0126369_120925012	3300012971	Tropical Forest Soil	VSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNH
Ga0126369_126397601	3300012971	Tropical Forest Soil	MSKVENLRTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVITYAFGYLVLR
Ga0126369_136419791	3300012971	Tropical Forest Soil	MSEVENLQTSNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNH
Ga0182036_107973702	3300016270	Soil	MSKVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTPLIFAGLCLPIFIAELRNHQNKWAI
Ga0182036_109762102	3300016270	Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHN
Ga0182041_116330082	3300016294	Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNH
Ga0182041_119834681	3300016294	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNK
Ga0182033_116747741	3300016319	Soil	MSKVENPRTIDRAKPFPCVSVALAVLAMFVLSWLAARGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDA
Ga0182033_117564981	3300016319	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHH
Ga0182033_119837111	3300016319	Soil	MSKVENLQTINRAKHFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCS
Ga0182032_107042901	3300016357	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRN
Ga0182032_113519331	3300016357	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPV
Ga0182034_106712421	3300016371	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAII
Ga0182034_107742033	3300016371	Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIA
Ga0182040_102239241	3300016387	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAI
Ga0182040_112093161	3300016387	Soil	MSKVENLQTTNRAEPFPCVSVVLVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPTFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPVLT
Ga0182039_111477272	3300016422	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAG
Ga0182039_115456331	3300016422	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCLPIFIAELRNHHNKWAIIVFNAVPVITYAFGYLVLRGPVLTGS
Ga0182038_121067451	3300016445	Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNH
Ga0210406_105056071	3300021168	Soil	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLP
Ga0213879_100129336	3300021439	Bulk Soil	MSKFENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIAFDAVPVITYAF
Ga0207684_100547345	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNYLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVIT
Ga0209465_100557611	3300027874	Tropical Forest Soil	MSKVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQLLLIFAGLCLPI
Ga0318534_104926502	3300031544	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYL
Ga0318573_100931241	3300031564	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVF
Ga0318515_101405991	3300031572	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLC
Ga0310915_105485022	3300031573	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAII
Ga0310915_110586781	3300031573	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIAFDAVPVITYAFGYLVLRGPVLTGS
Ga0318560_101416543	3300031682	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHN
Ga0306917_106189631	3300031719	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIA
Ga0306917_113549041	3300031719	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPV
Ga0306918_101267524	3300031744	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSSLAAQGVRNNLQPLLIFAGLCLPIF
Ga0318492_102975341	3300031748	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNK
Ga0318554_104250491	3300031765	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWA
Ga0318554_104506651	3300031765	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYL
Ga0318554_106448232	3300031765	Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVF
Ga0318509_104247082	3300031768	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIF
Ga0318521_106969261	3300031770	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVL
Ga0318543_101328841	3300031777	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFI
Ga0318508_10283761	3300031780	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHH
Ga0318547_106962061	3300031781	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSSLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFD
Ga0318497_100747301	3300031805	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITY
Ga0318568_101439694	3300031819	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVIT
Ga0318568_107539661	3300031819	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPV
Ga0310917_101232874	3300031833	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPI
Ga0318512_107023001	3300031846	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPLFIAELRNHHNK
Ga0306919_103151951	3300031879	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSSLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNK
Ga0306919_113747451	3300031879	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIF
Ga0318551_103656892	3300031896	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPVLT
Ga0318551_106432991	3300031896	Soil	MSKVENLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTPLIFAGLCLPIFIAELRNHQNKWAIIVFDAVPV
Ga0318520_105699912	3300031897	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLC
Ga0306923_110671341	3300031910	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHN
Ga0306923_112429102	3300031910	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHN
Ga0306921_103004381	3300031912	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPVLTGS
Ga0306921_106173913	3300031912	Soil	MSKVENLQTSNRAEPFPCVSVALVVLAMFVLSSLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDA
Ga0306921_110909541	3300031912	Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIF
Ga0306921_120362841	3300031912	Soil	MSKVGNLQTTNRAEAFPCVSVALVVLAMFVLSWLAARGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGP
Ga0310913_105318251	3300031945	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFI
Ga0310910_101423685	3300031946	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAII
Ga0310910_113634401	3300031946	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPLFIAELRNHHNKWAIIVFNAVPVITYAFGYLVLR
Ga0306926_104336111	3300031954	Soil	MSKVGNLQTTNRAEAFPCVSVALVVLAMFVLSWLAARGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVLRGPV
Ga0318530_100515501	3300031959	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIAFDAVPV
Ga0318531_101510981	3300031981	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIAFDAVPVITY
Ga0306922_100105381	3300032001	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHH
Ga0306922_121061222	3300032001	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAII
Ga0318569_104009511	3300032010	Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFNAVPVITYAFGYLVLRG
Ga0318507_101266773	3300032025	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAE
Ga0318549_103651881	3300032041	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDA
Ga0318545_100467761	3300032042	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKRAIIVFDAVPVITYAFGYLVLR
Ga0318545_100592525	3300032042	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLC
Ga0318556_100882213	3300032043	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHNKWAIIVFN
Ga0318556_103312231	3300032043	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLI
Ga0318506_101260612	3300032052	Soil	MSKVENLQTINRAKPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYAFGYLVL
Ga0318533_108913872	3300032059	Soil	MSKVENLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTPLIFAGLCLPIFIAELRNHQNKWAIIVFDAVPVITYAFGY
Ga0318504_102249321	3300032063	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWA
Ga0318510_102981052	3300032064	Soil	MSKVENLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTPLIFAGLCLTNLHRGTAQP
Ga0318513_100345817	3300032065	Soil	MSKVENLQTINRAKHFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGL
Ga0318513_100893461	3300032065	Soil	MSKVENLQTTNRAEPFPCVSVALVVLAMFVLSWLAAQGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAVPVITYA
Ga0318513_106915421	3300032065	Soil	MSKVENLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTPLIFAGLCLTNLHRGTAQPSEQVGDHR
Ga0318514_105576201	3300032066	Soil	MSKVENLQTTNRAKPFPCVSVALVVLAMFVLSWLAAKGVRNNLQTPLIFAG
Ga0318525_106540021	3300032089	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGL
Ga0318577_101086941	3300032091	Soil	MSKVENLQTINRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHPNKWAIIVFNAVPVITYAFGYLVLRGPVLTGS
Ga0306920_1001197098	3300032261	Soil	MSRVENLQTTNRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRN
Ga0306920_1020777461	3300032261	Soil	MSKVENLQTISRAKPFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIFIAELRNHHN
Ga0306920_1034319941	3300032261	Soil	MSKVENLQTINRAKHFPCVSVALAVLAMFVLSWLAAKGVRNNLQTLLIFAGLCSPIF
Ga0310914_111970041	3300033289	Soil	MSKVENLQTTNRAKPFPSVSIALAVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIA
Ga0318519_104034251	3300033290	Soil	MSKVENLQATNRAEPFPCVSVALVVLAMFVLSWLAAKGVRNNLQPLLIFAGLCLPIFIAELRNHHNKWAIIVFDAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074476

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences