Metagenome Family F074423

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074423
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	45 residues
Representative Sequence	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYT
Number of Associated Samples	18
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.93 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.798 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (81.513 % of family members)
Environment Ontology (ENVO)	Unclassified (81.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (81.513 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 0.00% Coil/Unstructured: 70.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13451	zf-trcl	0.84
PF02042	RWP-RK	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
All Organisms	root	All Organisms	4.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
cellular organisms	root	All Organisms → cellular organisms	2.52 %
Viruses	superkingdom	All Organisms → Viruses	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.68 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.84 %
Pyrenomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.68 %
Geminigeraceae	family	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	0.84 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007516\|Ga0105050_10857158	Not Available	515	Open in IMG/M
3300007519\|Ga0105055_10058757	Not Available	4113	Open in IMG/M
3300007519\|Ga0105055_10291995	Not Available	1514	Open in IMG/M
3300007519\|Ga0105055_10385633	Not Available	1237	Open in IMG/M
3300007519\|Ga0105055_10583770	Not Available	905	Open in IMG/M
3300007519\|Ga0105055_10655177	Not Available	829	Open in IMG/M
3300007519\|Ga0105055_10737844	Not Available	758	Open in IMG/M
3300007519\|Ga0105055_10912050	Not Available	647	Open in IMG/M
3300007519\|Ga0105055_10980873	Not Available	614	Open in IMG/M
3300007519\|Ga0105055_11036475	Not Available	590	Open in IMG/M
3300007519\|Ga0105055_11092550	Not Available	568	Open in IMG/M
3300007520\|Ga0105054_10038474	Not Available	5184	Open in IMG/M
3300007520\|Ga0105054_10077827	Not Available	3451	Open in IMG/M
3300007520\|Ga0105054_10186747	Not Available	2015	Open in IMG/M
3300007520\|Ga0105054_10341888	Not Available	1320	Open in IMG/M
3300007520\|Ga0105054_10383683	Not Available	1211	Open in IMG/M
3300007520\|Ga0105054_10408809	Not Available	1154	Open in IMG/M
3300007520\|Ga0105054_10834093	Not Available	665	Open in IMG/M
3300007520\|Ga0105054_10892228	Not Available	632	Open in IMG/M
3300007520\|Ga0105054_10911497	Not Available	622	Open in IMG/M
3300007522\|Ga0105053_10040703	Not Available	4943	Open in IMG/M
3300007522\|Ga0105053_10041240	Not Available	4908	Open in IMG/M
3300007522\|Ga0105053_10086398	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3225	Open in IMG/M
3300007522\|Ga0105053_10206293	Not Available	1887	Open in IMG/M
3300007522\|Ga0105053_10289000	Not Available	1495	Open in IMG/M
3300007522\|Ga0105053_10717847	Not Available	750	Open in IMG/M
3300007522\|Ga0105053_10729223	Not Available	741	Open in IMG/M
3300007522\|Ga0105053_10915464	Not Available	625	Open in IMG/M
3300007522\|Ga0105053_11076089	Not Available	554	Open in IMG/M
3300007523\|Ga0105052_10376940	Not Available	932	Open in IMG/M
3300007523\|Ga0105052_10419844	Not Available	874	Open in IMG/M
3300007523\|Ga0105052_10554692	Not Available	740	Open in IMG/M
3300007523\|Ga0105052_10876708	Not Available	562	Open in IMG/M
3300007523\|Ga0105052_11001339	Not Available	519	Open in IMG/M
3300007523\|Ga0105052_11042330	Not Available	507	Open in IMG/M
3300007722\|Ga0105051_10257593	Not Available	1323	Open in IMG/M
3300007722\|Ga0105051_10834779	Not Available	666	Open in IMG/M
3300007722\|Ga0105051_10893917	Not Available	640	Open in IMG/M
3300007722\|Ga0105051_10922785	Not Available	628	Open in IMG/M
3300007722\|Ga0105051_11182364	Not Available	543	Open in IMG/M
3300007722\|Ga0105051_11280571	Not Available	518	Open in IMG/M
3300011188\|Ga0136587_1070373	Not Available	863	Open in IMG/M
3300011188\|Ga0136587_1091029	Not Available	761	Open in IMG/M
3300011188\|Ga0136587_1155893	Not Available	589	Open in IMG/M
3300012037\|Ga0136559_1055173	Not Available	1030	Open in IMG/M
3300012037\|Ga0136559_1098287	Not Available	782	Open in IMG/M
3300012037\|Ga0136559_1101963	Not Available	768	Open in IMG/M
3300012037\|Ga0136559_1160997	Not Available	617	Open in IMG/M
3300012037\|Ga0136559_1196227	Not Available	563	Open in IMG/M
3300012037\|Ga0136559_1227063	Not Available	525	Open in IMG/M
3300012037\|Ga0136559_1249351	Not Available	502	Open in IMG/M
3300012269\|Ga0136560_1082434	Not Available	588	Open in IMG/M
3300012272\|Ga0136586_1053334	Not Available	922	Open in IMG/M
3300012272\|Ga0136586_1099074	Not Available	691	Open in IMG/M
3300012272\|Ga0136586_1127401	Not Available	616	Open in IMG/M
3300012272\|Ga0136586_1141879	Not Available	587	Open in IMG/M
3300012272\|Ga0136586_1157117	Not Available	561	Open in IMG/M
3300012272\|Ga0136586_1202766	Not Available	500	Open in IMG/M
3300027832\|Ga0209491_10034841	Not Available	5174	Open in IMG/M
3300027832\|Ga0209491_10097426	Not Available	2798	Open in IMG/M
3300027832\|Ga0209491_10123245	Not Available	2402	Open in IMG/M
3300027832\|Ga0209491_10191068	Not Available	1772	Open in IMG/M
3300027832\|Ga0209491_10268047	Not Available	1366	Open in IMG/M
3300027832\|Ga0209491_10269090	Not Available	1361	Open in IMG/M
3300027832\|Ga0209491_10373455	Not Available	1035	Open in IMG/M
3300027832\|Ga0209491_10450848	Not Available	877	Open in IMG/M
3300027832\|Ga0209491_10456397	Not Available	868	Open in IMG/M
3300027832\|Ga0209491_10458443	Not Available	864	Open in IMG/M
3300027832\|Ga0209491_10458776	Not Available	864	Open in IMG/M
3300027832\|Ga0209491_10482556	Not Available	824	Open in IMG/M
3300027832\|Ga0209491_10514871	Not Available	775	Open in IMG/M
3300027832\|Ga0209491_10706930	Not Available	572	Open in IMG/M
3300027848\|Ga0209390_10067624	Not Available	3487	Open in IMG/M
3300027848\|Ga0209390_10258020	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300027848\|Ga0209390_10371046	Not Available	1056	Open in IMG/M
3300027848\|Ga0209390_10505166	Not Available	803	Open in IMG/M
3300027848\|Ga0209390_10613115	Not Available	669	Open in IMG/M
3300027976\|Ga0209702_10128708	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1144	Open in IMG/M
3300027983\|Ga0209284_10086896	Not Available	1671	Open in IMG/M
3300027983\|Ga0209284_10273052	Not Available	862	Open in IMG/M
3300027983\|Ga0209284_10278637	Not Available	852	Open in IMG/M
3300027983\|Ga0209284_10288553	Not Available	833	Open in IMG/M
3300027983\|Ga0209284_10377473	Not Available	703	Open in IMG/M
3300027983\|Ga0209284_10558521	Not Available	541	Open in IMG/M
3300028369\|Ga0306896_1033423	Not Available	784	Open in IMG/M
3300028369\|Ga0306896_1063896	Not Available	572	Open in IMG/M
3300028373\|Ga0306897_1028612	Not Available	945	Open in IMG/M
3300028373\|Ga0306897_1031697	Not Available	898	Open in IMG/M
3300028373\|Ga0306897_1050438	Not Available	713	Open in IMG/M
3300032435\|Ga0335398_10035558	Not Available	5141	Open in IMG/M
3300032435\|Ga0335398_10089726	Not Available	3048	Open in IMG/M
3300032435\|Ga0335398_10103323	Not Available	2802	Open in IMG/M
3300032435\|Ga0335398_10188803	Not Available	1901	Open in IMG/M
3300032435\|Ga0335398_10209690	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	1768	Open in IMG/M
3300032435\|Ga0335398_10249048	Not Available	1562	Open in IMG/M
3300032435\|Ga0335398_10346375	All Organisms → Viruses → Predicted Viral	1212	Open in IMG/M
3300032435\|Ga0335398_10374440	Not Available	1138	Open in IMG/M
3300032435\|Ga0335398_10383165	Not Available	1117	Open in IMG/M
3300032435\|Ga0335398_10395235	Not Available	1089	Open in IMG/M
3300032435\|Ga0335398_10408048	Not Available	1061	Open in IMG/M
3300032435\|Ga0335398_10417610	Not Available	1041	Open in IMG/M
3300032435\|Ga0335398_10436375	Not Available	1003	Open in IMG/M
3300032435\|Ga0335398_10561034	Not Available	801	Open in IMG/M
3300032435\|Ga0335398_10597613	Not Available	755	Open in IMG/M
3300032435\|Ga0335398_10712653	Not Available	642	Open in IMG/M
3300032435\|Ga0335398_10775405	Not Available	594	Open in IMG/M
3300032435\|Ga0335398_10790755	Not Available	583	Open in IMG/M
3300032435\|Ga0335398_10819980	Not Available	564	Open in IMG/M
3300032462\|Ga0335396_10109724	Not Available	1818	Open in IMG/M
3300032462\|Ga0335396_10128833	Not Available	1667	Open in IMG/M
3300032462\|Ga0335396_10134558	Not Available	1629	Open in IMG/M
3300032462\|Ga0335396_10179967	Not Available	1392	Open in IMG/M
3300032462\|Ga0335396_10279279	Not Available	1091	Open in IMG/M
3300032462\|Ga0335396_10310554	Not Available	1027	Open in IMG/M
3300032462\|Ga0335396_10315362	Not Available	1018	Open in IMG/M
3300032462\|Ga0335396_10505334	Not Available	766	Open in IMG/M
3300032462\|Ga0335396_10686035	Not Available	629	Open in IMG/M
3300032462\|Ga0335396_10942565	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.51%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	18.49%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	81.51%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	18.49%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	81.51%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	18.49%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	81.51%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	18.49%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012269	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #497	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028369	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562 (v2)	Environmental	Open in IMG/M
3300028373	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105050_108571582	3300007516	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0105055_100587571	3300007519	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVC
Ga0105055_102919951	3300007519	Freshwater	MYFLHLYGLHLYCALVDLGSSGPPGVRPTPGLTSSTQVVCVCVRAYTSTH
Ga0105055_103856331	3300007519	Freshwater	MHFVHLYGLHVYCALLDLGSSGSPGVRPTPGLTSSTQVVCVCVRAYTSTHTPTTL
Ga0105055_105837701	3300007519	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQ
Ga0105055_106551772	3300007519	Freshwater	MYGQMYFVHLYGLHVNHDLVDLSSFGSQGVRPTPGLTSSTQVVCVFVRAYTSTNTH
Ga0105055_107378441	3300007519	Freshwater	MYFVHLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQ
Ga0105055_109120502	3300007519	Freshwater	MYCVHLYGLHVYCALVDLDSSDSPGVRPTPGLTSSTQ
Ga0105055_109808731	3300007519	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVV
Ga0105055_110364751	3300007519	Freshwater	MYCVHLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQV
Ga0105055_110925502	3300007519	Freshwater	MYFVHLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQVVCVRVRA
Ga0105054_100384741	3300007520	Freshwater	MYFVHLYGLHVYCALVDLGSSGFPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0105054_100778276	3300007520	Freshwater	MYFVHLYGLHAYCALVDLGSSGFPGVRPTPGLTSSTQVVCVCVRAYTSTHTP
Ga0105054_101867473	3300007520	Freshwater	MYCVHLYGLHVYCALVDLNSSDSPGVRPTPGLTSSTQVVCVCVRAYTSTHPP
Ga0105054_103418881	3300007520	Freshwater	MYCVLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAY
Ga0105054_103836832	3300007520	Freshwater	MYSVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVR
Ga0105054_104088091	3300007520	Freshwater	MYRVHLYGLHVYYVLVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYTSTHTPTT
Ga0105054_108340931	3300007520	Freshwater	MYCVHLYGLHLYCALVDLDSSGPPDVRPTPGLTSSTQV
Ga0105054_108922282	3300007520	Freshwater	MYFVHLYGLHVYCALFDLESSGSPGVRPTPGLTSSTQVVCVCVRAYTSTHTPTTLTP
Ga0105054_109114971	3300007520	Freshwater	MMYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYTSTHT
Ga0105053_100407031	3300007522	Freshwater	MNCVNMYGLYVHCTLVNLDSFGSLGVRPTPGLTSSTQVVFVCVR
Ga0105053_100412409	3300007522	Freshwater	MYCVHICGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVCVYVRAYT
Ga0105053_100863981	3300007522	Freshwater	MYCVYLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQVVCVCVRA
Ga0105053_102062931	3300007522	Freshwater	MDCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVC
Ga0105053_102890003	3300007522	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTLGLTSSTQVVCVCVRA
Ga0105053_107178472	3300007522	Freshwater	MYCVHPYGLHVSCALVDLGSSGSPGVRPTPGLTSSTQVVCVCVRAY
Ga0105053_107292231	3300007522	Freshwater	MYCVHLYGLHVHCALVDVDSSGSPGVRPTPGLTSSTQVVCVYVRAYTS
Ga0105053_109154641	3300007522	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSNTQVV
Ga0105053_110760891	3300007522	Freshwater	MNCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVCVY
Ga0105052_103769402	3300007523	Freshwater	MYCVHLYGLYVYCALVNLDSSGLPGVSPTPGLTSSTQVVCVCVR
Ga0105052_104198442	3300007523	Freshwater	MYFVHLYGLHVCRSLVDLCSSGSPGVRPTPGLTSSTQVVCVCVRAYTRT
Ga0105052_105546922	3300007523	Freshwater	MYCVLLYGLHVYCTLVDLDSSGPPGVRPTPGLTSSTQVVCVCVRA
Ga0105052_108767081	3300007523	Freshwater	MYFVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVC
Ga0105052_110013391	3300007523	Freshwater	MYCVHLYGLLVYCALVDLDSSGPPGVRPTHGLTSSTQVVCVCVRAYTSTH
Ga0105052_110423301	3300007523	Freshwater	MYRQMYCVHLHGLHVYCALVDLDSSGSPRVRPTPGLTSSTQVVCVYVRAYTSTHT
Ga0105051_102575932	3300007722	Freshwater	MYRQMYCVHLYGLHVYCALFDLDSSGPPGVRPTPGLTSSTQVVCVCVRAYTST
Ga0105051_108347792	3300007722	Freshwater	MYCLHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVCVCVR
Ga0105051_108939171	3300007722	Freshwater	MYYVHLYGLHLYCALVDLDSSGPPGVRPTPGLTSSTQVVCVCVRAYTSTHT
Ga0105051_109227852	3300007722	Freshwater	MYCVHLYGLHVYCALVDLVSSGPPGVRPTPGLTSSTQVVCVCVRAYTSKHTPTT
Ga0105051_111823641	3300007722	Freshwater	MYSVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSAQV
Ga0105051_112805711	3300007722	Freshwater	MYRQMYCVHPYGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVC
Ga0136587_10703731	3300011188	Saline Lake	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYT
Ga0136587_10910291	3300011188	Saline Lake	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVC
Ga0136587_11558931	3300011188	Saline Lake	MYFVQIHGLHAYCALVDLDSSGSSGVRPTPRLTLITQVVCV
Ga0136559_10551732	3300012037	Saline Lake	MYRVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCV
Ga0136559_10982871	3300012037	Saline Lake	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQ
Ga0136559_11019632	3300012037	Saline Lake	MYCVHIYGLHVYCALVDLDSSGSPGVHPTPGLTSSTQVVCVCVRAYT
Ga0136559_11609972	3300012037	Saline Lake	MYGQMYCVHLDGLNVYCALVDLDSSGSPGVHPTAGLTSSTQVVCVCVRAYTSTHTPT
Ga0136559_11962271	3300012037	Saline Lake	MYFVHLYGLHVYCALVDLGSSDSPGVRPTPGLTSSTQVVCVCVRAYTST
Ga0136559_12270633	3300012037	Saline Lake	VHAHVYCALVDPDSSGPPGVRPTPGLTSSTQVVCVCVRAYTSTHTLTTLTPA
Ga0136559_12493511	3300012037	Saline Lake	MYLVNLYGLHVYCALFDLGSSGSPGVRPTPGLTSSTQVVCVCVRAYTST
Ga0136560_10824341	3300012269	Saline Lake	MYCVHPYGLHVLCAFVNLGSSGSPGVCPTPGPTSSTHVVYVCVSAYTSTHTLT
Ga0136586_10533341	3300012272	Saline Lake	MYCVHLYGLHVYCALVDLDSSDSPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0136586_10990742	3300012272	Saline Lake	MYFVHIYSLHVYRDLVDLDSSGPSGVRPTPGLTSSTKVVCVCVRASTH
Ga0136586_11274011	3300012272	Saline Lake	MYCLHLYGLHVYCVLVDLDSSGSPGVRPRPGLTSSTQVVCVCVRAYTSTHTH
Ga0136586_11418791	3300012272	Saline Lake	YRQMYCVHLYGLHVYCALVDLDSSDSPGVRPTPGLTSSTQVVCVCVVLFY*
Ga0136586_11571171	3300012272	Saline Lake	MYCVHLYGLRVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0136586_12027661	3300012272	Saline Lake	MYSVHLYGLHVYCALVDLGSSGPPGVRPTPGLTLSTQVVYVCVRVYTSTHTPTT
Ga0209491_100348418	3300027832	Freshwater	MYFVHLYGLHVYCALVDLGSSGFPGVRPTPGLTSSTQVVC
Ga0209491_100974261	3300027832	Freshwater	MYCVHLHGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVCVYVRAYTS
Ga0209491_101232451	3300027832	Freshwater	MYCVDLYGLHVYCALVNLDSSSSPGVRPTPGLTSSTRVVCVYVRAYT
Ga0209491_101910683	3300027832	Freshwater	MYSVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSIQVVCVCVRAY
Ga0209491_102680473	3300027832	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQV
Ga0209491_102690901	3300027832	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVHPTPGLTSSTQVVCVCVRTYT
Ga0209491_103734551	3300027832	Freshwater	MYCVHLYGLHVSCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAY
Ga0209491_104508481	3300027832	Freshwater	MYCVHLYGLHVYCALVDLNSSGPPGVRPTPGLTSS
Ga0209491_104563971	3300027832	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVHPTPGLTSSTQVVCVCVRV
Ga0209491_104584431	3300027832	Freshwater	MYCVNLYGLHVYCALVDLDSSDSPGVRPTPGLTSSTQVVCVCVR
Ga0209491_104587762	3300027832	Freshwater	MYCVHLYGLHVYCTLVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYTSTHTPTTL
Ga0209491_104825561	3300027832	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSST
Ga0209491_105148711	3300027832	Freshwater	MYYVHLYGLHVYCALVDLGSSGSPGVRPTPGLTLSTQVVCVCVRAYTSTHTPT
Ga0209491_107069301	3300027832	Freshwater	MYCVHLYGLHVYCTLVDLGSSGSPGVRPTPALTSSTQVVCVCLRA
Ga0209390_100676246	3300027848	Freshwater	MYCVHICGLHVYCALVDLDSSGSPGVRPTPGLTSSTRVVCVYVRAYTS
Ga0209390_102580201	3300027848	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSS
Ga0209390_103710461	3300027848	Freshwater	MYFVHLYGLHVYCALFDLESSGSPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0209390_105051661	3300027848	Freshwater	MYCVHQYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVC
Ga0209390_106131151	3300027848	Freshwater	MYCLHLYGLHVYCALVDLDSSGSLGVRPTPGPTSSTQVVYV
Ga0209702_101287082	3300027976	Freshwater	MYFVHLYGLHVYCALVNLDSSGSPGVRPTPGLTSSTPVVCVCVRAYTST
Ga0209284_100868961	3300027983	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSGNQVVCVCV
Ga0209284_102730521	3300027983	Freshwater	MYCVHLYSLHVYCALVDPDSSGSPGVRPTPGLTSSTQVVCVCTRAYA
Ga0209284_102786371	3300027983	Freshwater	MYYVHLYGLHVYCALVDVDSSGPPGVRPTPGLTSSTQVVCVCVRAYTSTH
Ga0209284_102885531	3300027983	Freshwater	MYRQMYCVHLYGLHVYYALVDLDSSGSPGVRPSPGLTSSTQEVCVCTRVYKH
Ga0209284_103774731	3300027983	Freshwater	MYCVHLYGLHVHCALVDLDSSGPLGVRPTPGLTSGTQVV
Ga0209284_105585211	3300027983	Freshwater	MYRQMYCVHIHGLHVYCALVDLDFPSSPGVRPTPGLTSSTRQLCLCACA
Ga0306896_10334233	3300028369	Saline Lake	MYGVHVYCALVNLDSSGCPGVSPTPGLTPGTQVVCVCIRAYTCTYPPT
Ga0306896_10638962	3300028369	Saline Lake	MYFVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRVY
Ga0306897_10286121	3300028373	Saline Lake	MYCVHIYGLHVYCALVDLDSSGSPGVHPTPGLTSS
Ga0306897_10316971	3300028373	Saline Lake	MYRQMYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVR
Ga0306897_10504381	3300028373	Saline Lake	MYFVHLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQVV
Ga0335398_100355581	3300032435	Freshwater	MYFVNLYGLHIYCALVDLGSSGFPGVRPTPGLTSSTQVVCVCVRAYTSTHT
Ga0335398_100897261	3300032435	Freshwater	MYCVHIYGLHVYCALVDLGSSGSPGVRPTPRLTSSTQVIYV
Ga0335398_101033231	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVHPTPGLTSSSQVFYVCVR
Ga0335398_101888031	3300032435	Freshwater	MNDLHVYCALVNLDSSGSPGVRHTPGLTSSTRVVCVCLRSYTSTPTHH
Ga0335398_102096901	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDSSGGSPGVRPTPGLTSSTQ
Ga0335398_102490481	3300032435	Freshwater	MYFVHIYGLHVYCALVDLDSSGSPGVRPTPGLTSSTQ
Ga0335398_103463753	3300032435	Freshwater	MYFVHLYGLHVYCSLVDLGCSSSPGVRPTLGLTSSTHVVCVCVRAYTSTHTPT
Ga0335398_103744401	3300032435	Freshwater	MYFVHLYGPHVYCALVDLDSSGSPGVRPTPGLTSRTQVVCVCV
Ga0335398_103831651	3300032435	Freshwater	MYRVHLYGLHVYYVLVDLDSSGSPGVRPTPGLTSSTQVVCVC
Ga0335398_103952352	3300032435	Freshwater	MYFVHLYGLHVYCALFDLESSGSPGVRPTPGLTSSTQVVCV
Ga0335398_104080482	3300032435	Freshwater	MYCVHLYGLHVYCALVDLYSSGSPGVRPTPGLTSSNQVVCVCVRAY
Ga0335398_104176103	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDYSGSPGVRPTPGLTSSTQVVCVCV
Ga0335398_104363751	3300032435	Freshwater	MYCVHLYGLHVYFALVDLGSSGSPGVRPTPGLTSSTQVVCLCVRAYT
Ga0335398_105610341	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVCVCVPLPIPPQIE
Ga0335398_105976131	3300032435	Freshwater	MYFVHLYGLHVYCALVDLGSSGSPGVRPTPGLTSSTQVVC
Ga0335398_107126533	3300032435	Freshwater	MHCVHPYDLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCVCVRAYTSTH
Ga0335398_107754051	3300032435	Freshwater	MYCVHLYSLHVYCALVDLDSSGSPGVRPTPGLTSSTQVVCV
Ga0335398_107907551	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDSSGSPGVRPTPGLTSNTQ
Ga0335398_108199801	3300032435	Freshwater	MYCVHLYGLHVYCALVDLDSFGPPGVRPTPGLTSSTQV
Ga0335396_101097243	3300032462	Freshwater	MYCVHLYGLHVYYALVDLDSSGPPGVRPTPGLTSS
Ga0335396_101288331	3300032462	Freshwater	MYCVHLYGLQVYCALVDLDSSGSPGVRPTPGLTTSTQVV
Ga0335396_101345582	3300032462	Freshwater	MYFVHLYGLHVYCALVDLDSSGPPGVRPTPGLTSSTQVVCVCVR
Ga0335396_101799671	3300032462	Freshwater	MHCVHLYGLLVYCALVDLDSSGPPGVRPTHGLTSSTQVVCVCVRAYT
Ga0335396_102792792	3300032462	Freshwater	MYCVHLYGLHLYCALVDLDFSGPPGVRPTPGLTSSTQVVCVCVRAYTS
Ga0335396_103105542	3300032462	Freshwater	IYRQMYRVDLYGLHVYCALVDLDSSGSPGVRPTPGLT
Ga0335396_103153621	3300032462	Freshwater	MYCVHLYGLHVYYALVDLDSSGPPGVRPTPGLTSNTQVVCVCVRAYTNT
Ga0335396_103801281	3300032462	Freshwater	MYFVHLYGLYLYCALVDLDSSGSPGVCSTPGLTSGTHVVCVCTRVYKHTPTHHPNTRKNREIYK
Ga0335396_105053341	3300032462	Freshwater	MYCVHLYGLHVYCALVNLDSSGFPGVRPKPGLTSSTQVVCVY
Ga0335396_106860351	3300032462	Freshwater	MYCVYGLHVYCALVDLDSCGPPGVRPTPGLTSSTQLVCVCVR
Ga0335396_109425651	3300032462	Freshwater	MYCVHLYGLHLYCALVDLDSSGPPDVRPTPGLTSSTQVVCVCVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074423

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences