Metagenome / Metatranscriptome Family F074334

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074334
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	94 residues
Representative Sequence	LAEEGSAFQGIVAELIAEDAEGAWGVAEASGDVGGGLVIDEEGTEGFVLALQGELGGKEEVLVGRCGYLIRSAGLHIQMMLQKHEAVNLF
Number of Associated Samples	101
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.55 %
% of genes near scaffold ends (potentially truncated)	74.79 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.092 % of family members)
Environment Ontology (ENVO)	Unclassified (37.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.454 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.24% β-sheet: 0.00% Coil/Unstructured: 45.76%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00106	adh_short	0.84
PF01548	DEDD_Tnp_IS110	0.84
PF00873	ACR_tran	0.84
PF00196	GerE	0.84
PF13701	DDE_Tnp_1_4	0.84
PF13304	AAA_21	0.84
PF00376	MerR	0.84
PF00078	RVT_1	0.84
PF02281	Dimer_Tnp_Tn5	0.84
PF02637	GatB_Yqey	0.84
PF02129	Peptidase_S15	0.84
PF13744	HTH_37	0.84
PF04616	Glyco_hydro_43	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0064	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	Translation, ribosomal structure and biogenesis [J]	0.84
COG1610	Uncharacterized conserved protein YqeY, may have tRNA amino acid amidase activity	General function prediction only [R]	0.84
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.24 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	66.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.97 %
Unclassified	root	N/A	2.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	64.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.97 %
Unclassified	root	N/A	2.52 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	64.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.97 %
Unclassified	root	N/A	2.52 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	64.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.97 %
Unclassified	root	N/A	2.52 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	64.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.97 %
Unclassified	root	N/A	2.52 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	0.84 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	64.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.97 %
Unclassified	root	N/A	2.52 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	0.84 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10061305	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300000567\|JGI12270J11330_10281031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	524	Open in IMG/M
3300004781\|Ga0062379_10194763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	536	Open in IMG/M
3300005166\|Ga0066674_10298702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	757	Open in IMG/M
3300005172\|Ga0066683_10711718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	594	Open in IMG/M
3300005174\|Ga0066680_10056637	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300005536\|Ga0070697_101606849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005553\|Ga0066695_10723740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005557\|Ga0066704_10785606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	593	Open in IMG/M
3300006046\|Ga0066652_101624900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006052\|Ga0075029_100549845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	767	Open in IMG/M
3300006059\|Ga0075017_100918647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	680	Open in IMG/M
3300006086\|Ga0075019_10725958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	629	Open in IMG/M
3300006162\|Ga0075030_100111367	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300006162\|Ga0075030_101560008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	517	Open in IMG/M
3300009029\|Ga0066793_10608192	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300009029\|Ga0066793_10642333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	604	Open in IMG/M
3300009038\|Ga0099829_10056375	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300009038\|Ga0099829_10657645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300009038\|Ga0099829_11205497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	627	Open in IMG/M
3300009088\|Ga0099830_11384768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	585	Open in IMG/M
3300009089\|Ga0099828_10552566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1037	Open in IMG/M
3300009111\|Ga0115026_11645401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009137\|Ga0066709_100332508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	2079	Open in IMG/M
3300009143\|Ga0099792_11112263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	533	Open in IMG/M
3300009166\|Ga0105100_10881736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	557	Open in IMG/M
3300009518\|Ga0116128_1217448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	534	Open in IMG/M
3300009521\|Ga0116222_1043849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1955	Open in IMG/M
3300009521\|Ga0116222_1076994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1439	Open in IMG/M
3300009523\|Ga0116221_1434195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	573	Open in IMG/M
3300009524\|Ga0116225_1468156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	560	Open in IMG/M
3300009525\|Ga0116220_10335934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	669	Open in IMG/M
3300009636\|Ga0116112_1224444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	520	Open in IMG/M
3300009683\|Ga0116224_10114232	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300009683\|Ga0116224_10256900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	833	Open in IMG/M
3300009700\|Ga0116217_10431785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	833	Open in IMG/M
3300009792\|Ga0126374_10790254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	724	Open in IMG/M
3300010333\|Ga0134080_10594539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	537	Open in IMG/M
3300010379\|Ga0136449_102335563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	774	Open in IMG/M
3300010379\|Ga0136449_103665267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	581	Open in IMG/M
3300011269\|Ga0137392_10410582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1124	Open in IMG/M
3300011269\|Ga0137392_11333757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	577	Open in IMG/M
3300011269\|Ga0137392_11495176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	534	Open in IMG/M
3300011269\|Ga0137392_11634588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	502	Open in IMG/M
3300011270\|Ga0137391_10715901	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300011271\|Ga0137393_10545249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	995	Open in IMG/M
3300012096\|Ga0137389_10093116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2379	Open in IMG/M
3300012096\|Ga0137389_11679030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012164\|Ga0137352_1019256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1274	Open in IMG/M
3300012189\|Ga0137388_11101047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	731	Open in IMG/M
3300012189\|Ga0137388_11261801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	677	Open in IMG/M
3300012198\|Ga0137364_10095692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2082	Open in IMG/M
3300012205\|Ga0137362_10970823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	724	Open in IMG/M
3300012207\|Ga0137381_10301907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300012207\|Ga0137381_11650201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012208\|Ga0137376_11757122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	511	Open in IMG/M
3300012211\|Ga0137377_11558953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	585	Open in IMG/M
3300012232\|Ga0137435_1271921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	513	Open in IMG/M
3300012350\|Ga0137372_10938758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012351\|Ga0137386_10322451	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300012351\|Ga0137386_10681267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	739	Open in IMG/M
3300012356\|Ga0137371_10518537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	919	Open in IMG/M
3300012357\|Ga0137384_10946457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	693	Open in IMG/M
3300012357\|Ga0137384_11228331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012359\|Ga0137385_10934460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	717	Open in IMG/M
3300012359\|Ga0137385_11246683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	606	Open in IMG/M
3300012361\|Ga0137360_11524426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	573	Open in IMG/M
3300012923\|Ga0137359_11588347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	542	Open in IMG/M
3300012925\|Ga0137419_11496664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	572	Open in IMG/M
3300012929\|Ga0137404_11246801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	684	Open in IMG/M
3300012929\|Ga0137404_11527902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	618	Open in IMG/M
3300012930\|Ga0137407_11735707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300014154\|Ga0134075_10581899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	507	Open in IMG/M
3300014159\|Ga0181530_10567298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	558	Open in IMG/M
3300014162\|Ga0181538_10545345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	608	Open in IMG/M
3300014270\|Ga0075325_1220654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300014321\|Ga0075353_1151771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014496\|Ga0182011_10099355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2030	Open in IMG/M
3300014498\|Ga0182019_10220405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1235	Open in IMG/M
3300014638\|Ga0181536_10346114	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300014839\|Ga0182027_10698629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1075	Open in IMG/M
3300014873\|Ga0180066_1003639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2306	Open in IMG/M
3300015264\|Ga0137403_11546525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	515	Open in IMG/M
3300017933\|Ga0187801_10144371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300017948\|Ga0187847_10744582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300017955\|Ga0187817_11049322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300017996\|Ga0187891_1083263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1245	Open in IMG/M
3300018000\|Ga0184604_10262181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	606	Open in IMG/M
3300018005\|Ga0187878_1315335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	557	Open in IMG/M
3300018021\|Ga0187882_1216689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	750	Open in IMG/M
3300018043\|Ga0187887_10929656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300018046\|Ga0187851_10572792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300018433\|Ga0066667_11437046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300018468\|Ga0066662_13006597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	501	Open in IMG/M
3300018482\|Ga0066669_10736043	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300020062\|Ga0193724_1087041	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300021081\|Ga0210379_10195923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	869	Open in IMG/M
3300021170\|Ga0210400_10003527	All Organisms → cellular organisms → Bacteria	13869	Open in IMG/M
3300021329\|Ga0210362_1524744	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300026333\|Ga0209158_1288223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	564	Open in IMG/M
3300026359\|Ga0257163_1071543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	559	Open in IMG/M
3300027570\|Ga0208043_1066226	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300027625\|Ga0208044_1137515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	686	Open in IMG/M
3300027696\|Ga0208696_1095742	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300027854\|Ga0209517_10496056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	666	Open in IMG/M
3300027911\|Ga0209698_11244510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	547	Open in IMG/M
3300028784\|Ga0307282_10475466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	607	Open in IMG/M
3300030706\|Ga0310039_10027866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2649	Open in IMG/M
3300031708\|Ga0310686_107887217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031902\|Ga0302322_102135434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	689	Open in IMG/M
3300032174\|Ga0307470_11184884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	619	Open in IMG/M
3300032770\|Ga0335085_10909830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	958	Open in IMG/M
3300033480\|Ga0316620_11589759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	647	Open in IMG/M
3300033755\|Ga0371489_0130328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1404	Open in IMG/M
3300033982\|Ga0371487_0071159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1926	Open in IMG/M
3300034088\|Ga0373912_0193262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.95%
Aquatic	Environmental → Aquatic	25.21%
Bioremediation	Engineered → Bioremediation	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Freshwater	Environmental → Aquatic → Freshwater	15.13%
Sediment	Environmental → Aquatic → Sediment	9.24%
Peat	Environmental → Terrestrial → Peat	2.52%
Marine	Environmental → Aquatic → Marine	0.84%
Metal	Engineered → Bioremediation → Metal	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.56%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.84%
Loam	Environmental → Terrestrial → Soil → Loam	0.84%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.84%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.09%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.84%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.84%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.84%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.84%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034088	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100613053	3300000567	Peatlands Soil	MEESASIWKNWTASEIPFSELIAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGRKEEVLVSRYRYLIRSAGLHIQMMLPKHGAVNLF*
JGI12270J11330_102810311	3300000567	Peatlands Soil	RGLRAPLRQAEEGSAFLGIVAELIAEDAEEAGGVAEAASDVGRGLLIDEEGAEGFVLALQGGLRGKKEVLVARCGYLIGSAGLHNQIVLQKHEAVNMF*
Ga0062379_101947631	3300004781	Wetland Sediment	AGGRGLRTALWQAEEGSAFLGIVAELIAEDAEEAGGVAEAASDVGGGLLIDEVGTEGFVLALQRKQRGKEEVLVARCSYLIRSAGFHI*
Ga0066674_102987022	3300005166	Soil	RSALWLAEEGRAFQGIVAELMAEDAEGAAGVTETTGDFSRRLVIDEEGTERFVLALQGELGGKEEILVARCRYLIRSAGLHISMVL*
Ga0066683_107117181	3300005172	Soil	LRATLRLAEEGGAFLRIVAEQITQDAEGAGGIAEAAGDVGGRRLLDEVSAQGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMF*
Ga0066680_100566373	3300005174	Soil	LRVVAELITQDAEGAGGIAEAAGDVAGGLLIDEIGAEGFVLALQGELGGKEEVVVVGCRYLIRSAGLHNSMMLSNHVAVNMFLE*
Ga0070697_1016068491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EERGAFLRVVAELITEDAKGARGIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGQEEVLVARCRYLIRSAGLHTSIVLPKHVPVNMFG*
Ga0066695_107237401	3300005553	Soil	IMAELMAEDSEGTGGVAETTGDVAGGLLLNEVSTEGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMF*
Ga0066704_107856061	3300005557	Soil	TDAVAGGRRLRSALWLAEEGRAFQGIVAELMAEDAEGAGGVTETTGDFSRRLVIDEEGTERFVLALQGELGGKEEILVARCRYLIRSAGLHISMVLQKQEAVNMF*
Ga0074479_103148701	3300005829	Sediment (Intertidal)	GGVTETTGDVAGGLVLDEEGTEGLVLALRRKLRGEEEGLVTRCRYLIWSAGFHIQMML*
Ga0066652_1016249001	3300006046	Soil	AELMAEDAKSPAGVAEPARDLVRGQLVHEVGTQGFVLALQGELRGEEEVLVARCRYLIRSAGLHISMVLPKHGTVNMF*
Ga0075029_1005498452	3300006052	Watersheds	HVIDREIAFAHGNRQITDAIAGRRRLRSTVRLAEKGGAFLRVVAELMAEDAEGTRGIAEAAGDVGGGFLVEEESTEGFILALHGELRGQEEVPATRCRYLIGSAGLHISIVLPKHGIVNMFRWKRGG*
Ga0075017_1009186471	3300006059	Watersheds	RRLRSALRLAEEGGAFLRVVAELITQDAEGARGIAEAAGDVGGGFLVEEESTEGFILALHGELRGQEEVPATRCRYLIGSAGLHISIVLPKHGIVNMFRWKRGGSAQKASSQGRRCI*
Ga0075019_107259581	3300006086	Watersheds	RAALWQAEEGSAFLRVVSELITQDAEGAGGIAEAAGDIAGRLLIDKVSAKGFILALQGELRRKEEFLVPRCRYLIRSAGLHTWMMLHKHY*
Ga0075030_1001113673	3300006162	Watersheds	RVVAELMAEDAEGARRVTKATGDVGRGLLFDEVSTEGFVLALHGELRGEEEVLVGRCRYLICSAGLHILIVLPKHRVVNMFGEGKGR*
Ga0075030_1015600081	3300006162	Watersheds	SAFLRVVAELIAEDAEGARRVAETTGNVGRGLLIYEESTDGFVLALQRELRGKEEVLVSRCRYLIRSAGLHIEMMLQKHEAVNLFCEQGRR*
Ga0066793_106081922	3300009029	Prmafrost Soil	AGGRRLRSALRLAEEGGAFLRVVAELITQDAEGTRRVAEAAGDVAGGLLLDEVSAEGFVLALQGELRGKEEVLVARCRYLIRSAGFHILIVLPKHGTVNMFGEERGC*
Ga0066793_106423331	3300009029	Prmafrost Soil	RLAEEGGAFLRVVAELIAEDAEEAGGVTKAAGDVAGGFLLDEVSTEGFVLALQGELGGEEEVVVARCHYLIRSAGLHISMMLQKHYRVNMFGQVRRQLSTKTPADKAQTAYSVGTRAQNGISRA*
Ga0099829_100563752	3300009038	Vadose Zone Soil	LWLAEEGSAFLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGEWGGEEEVVVAKCRYLIRSAGLHIWIMLQKHY*
Ga0099829_106576451	3300009038	Vadose Zone Soil	EGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGELGGEEEVVVAKCGYLIRSAGLHIWIMLQKHY*
Ga0099829_112054971	3300009038	Vadose Zone Soil	EGSAFLGVVAELMAEDAEGAGGVTEATGDVGRGLLIDEEGAEGFVLALQRELGGKEEVVVPRGRYLIRSAGLHI*
Ga0099830_113847682	3300009088	Vadose Zone Soil	ITQDAEGAGGIAEAAGDVAGGLLIDEIGAEGFVLALQGELGGKEEVVVVGCRYLIRSAGLHNSMMLSNHVAVNMFLE*
Ga0099828_105525662	3300009089	Vadose Zone Soil	LWLAEEGSAFLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGELGGEEEVVVAKCGYLIRSAGLHIWIMLQKHY*
Ga0115026_116454011	3300009111	Wetland	IAGGRRLRSALRLAEEGGAFLRVVPELIAEDAEGTRRIAEAAGDVGGGFLLDEVSTKGFILALQGELRGQEEVLIARRRYLIRSAGLHIWIVLPKHGVVNMFGEERGR*
Ga0066709_1003325082	3300009137	Grasslands Soil	LWLAEEGRAFQGIVAELMAEDAEGAGGVTETTGDFSRRLVIDEEGTERFVLALQGELGGKEEILVARCRYLIRSAGLHISMVLQKQEAVNMF*
Ga0099792_111122631	3300009143	Vadose Zone Soil	TDAVAGGSGLRSALRMAEEGSTFLGVVAKLMAEDAEGARGVTETTGDVGRRFLIDEEGAEGFVLALHRELGGKEEVLVRRSSYLMYSTGLHNEIVP*
Ga0105100_108817361	3300009166	Freshwater Sediment	GRRLWSAVRLAEEGGAFMRIVAELIAEDAEGAGGIAEAAGDIDGGLLLDKVSTEGFVLALHGELRRQEEVLVARCRYLVRSAGLHI*
Ga0116128_12174481	3300009518	Peatland	RVVAELITQDAEGAGGIAEAAGDVGGGLVLDEVSTEGFILALHGELRGEEEVLVAGCRYLIRCARLHISMVLPKHGVVNMFREKRGR*
Ga0116222_10438492	3300009521	Peatlands Soil	LAEEGSAFQGIVAELIAEDAEGAWGVAEASGDVGGGLVIDEEGTEGFVLALQGELGGKEEVLVGRCGYLIRSAGLHIQMMLQKHEAVNLF*
Ga0116222_10769941	3300009521	Peatlands Soil	GSALLRVVTELMAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF*
Ga0116221_14341952	3300009523	Peatlands Soil	MAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF*
Ga0116225_14681562	3300009524	Peatlands Soil	AEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF*
Ga0116220_103359341	3300009525	Peatlands Soil	LWLAEEGSALLRVVTELIAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGRKEEVLVSRYRYLIRSAGLHIQMMLPKHGAVNLF*
Ga0116112_12244441	3300009636	Peatland	VVAELIAEDAEEAGRVTEAAGDVGGGFLIDEVGAEGFVLALQRELGGKEEGLVAESGYLISSAGLHISIVLPKHGVVNMFREKRGG*
Ga0116224_101142322	3300009683	Peatlands Soil	MEESASIWKNWTASEIPFSELIAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQKHEAVNLF*
Ga0116224_102569001	3300009683	Peatlands Soil	FAHGHRQITDTVAGGRGLRAALWQAEEGSALLRVVAELIAEDAEGARRVAETTGDFGRGLLIYEEGTEGFVLALQGELGRKEEVLVSRYRYLIRSAGLHIQMMLPKHGAVNLF*
Ga0116217_104317851	3300009700	Peatlands Soil	AFLRVVAELMAQDAEGTGGVTETAGDVGGRLLLDQVGTEGLVLALHRELRREEEVLIARCRYLIRSAGLHIVTVLQKHEIVNMF*
Ga0126374_107902541	3300009792	Tropical Forest Soil	EGGAFLRVVAELITQDAEGDGGIAEAAGDEGGRLFLDEVSTQGFVLTLHGELRRQEEVLVGWRRYLIDSAGLHIWMVLPKHTRVNMFGEEGIHLSRKHR*
Ga0116219_106890982	3300009824	Peatlands Soil	AGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF*
Ga0134080_105945391	3300010333	Grasslands Soil	SALIRVVSELMAEDAEEAWGVAEAAGDVCRGLLIDEVSTESFVLALQGELRGEEEVLVARRGYLIGSAGLHIPIVL*
Ga0136449_1023355632	3300010379	Peatlands Soil	EEGSTLLGIVAELIAENAESARRIAETAGDLGRGLLIDEAGTEGFVLALQGELRGEEEVLVGRRRYLIRSAGLHK*
Ga0136449_1036652672	3300010379	Peatlands Soil	MTQDAEGAWGVAEASGDVGGGRVIDEEGTEGFLLALQGELGGREEVLVGRCGYLIRSAGLHIQMMLQKHEAVNLF*
Ga0137392_104105822	3300011269	Vadose Zone Soil	LWLAEEGSTFLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGEWGGEEEVVVAKCRYLIRSAGLHIWIMLQKHY*
Ga0137392_113337571	3300011269	Vadose Zone Soil	RVVAELITQDAEGAGGIAEAAGDVAGGLLIDEIGAEGFVLALQGELGGKEEVVVVGCRYLIRSAGLHNSMMLSKHVSGNIF*
Ga0137392_114951761	3300011269	Vadose Zone Soil	FAHGNSQITDAVAGGRGLRPALRLSEERGAFLRVVAELETEDAKGARRIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGEEEVLVAKCRYLIRSAGLHTSIVLPKHVAVNMFG*
Ga0137392_116345881	3300011269	Vadose Zone Soil	ATGDVGRGLLIDEEGAEGFVLALQRELRGKEEVLVSRCGYLICSAGLHIKMMLQKHEAVNMFGEEGRR*
Ga0137391_107159012	3300011270	Vadose Zone Soil	ITQDAEGAGGIAEAAGDVGGRLLLDEVSAQGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMFKERKTLLSTKQ*
Ga0137393_105452491	3300011271	Vadose Zone Soil	LWLAEEGSTFLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEIGAEGFVLALQGELGGKEEVVVVGCRYLIRSAGLHNSMMLSNHVAVNMFLE*
Ga0137389_100931162	3300012096	Vadose Zone Soil	LWLAEEGSTFLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGELGGEEEVVVAKCGYLIRSAGLHIWIMLQKHY*
Ga0137389_116790301	3300012096	Vadose Zone Soil	EGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGEWGGEEEVVVAKCRYLIRSAGLHIWIMLQKHY*
Ga0137352_10192562	3300012164	Soil	LAEEGSAFLRVVAELLAEDAEGAGGVAEPAGDVAGGLLIDEEGTEGFVLALQRELRGKEEVLVARCRYLIRSAGLYIQMVLQNITQSRCFGEQRGG*
Ga0137388_111010472	3300012189	Vadose Zone Soil	VAELIAEDAEEAGGVTEAAGDVAGGFLIDEVGAESFVLALQRELGGKEEVLVVRCGYLICSAGVHILIMLQKHS*
Ga0137388_112618012	3300012189	Vadose Zone Soil	FLGVVAELMAEDAEGARGVTEAAGYVAGGLLIDEVSTEGFVLALQGEWGGEEEVVVAKCRYLIRSAGLHIWIMLQKHY*
Ga0137364_100956922	3300012198	Vadose Zone Soil	MAELMAEDSEGTGGVAETTGDVAGGLLLNEVSTEGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMF*
Ga0137362_109708231	3300012205	Vadose Zone Soil	HGNSQITDAVASGRRLRPALRLSEERGAFLRVVAELITEDAKGARGIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGQEEVLAARCRYLIRSAGLHTSIVLQKHVPVNMFG*
Ga0137381_103019071	3300012207	Vadose Zone Soil	AFLRVVAELETEDAKGARRIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGEEEVLVAKCRYLIRSAGLHTSIVLPKHVAVNMFG*
Ga0137381_116502011	3300012207	Vadose Zone Soil	GIVAELMAEDAEGARGVAEAAGDVAGRLFIEEVSAEGFVLALQGELRGKEEVLVARCRYLIRGAGLHIQMMLPKHDVVNMFREGKEAAKHKT*
Ga0137376_117571221	3300012208	Vadose Zone Soil	LTGFAHGNSQITDAVAGGRGLRPALRLSEERGAFLRVVAELKTEDAKGARGIAEAAGDVCRGLLIDEVSTESFVLALQGELRGEEEVLVARRGYLIGSAGLHIPIVL*
Ga0137377_115589531	3300012211	Vadose Zone Soil	RLSEERGAILRVVAELITEDAKGARGIAEAAGDIGGGLLLDEVSTQGFVLALHGELRGEEEVLVAKCRYLIRSAGLHTSIVLPKHVAVNMFGIEINLSSTKHQ*
Ga0137435_12719211	3300012232	Soil	SALRLAEEGSAFLRVVAELIAEDAEGAGGIAEAAGNLGGGLLLDEVSTEGFVLPLHGELRGEEEVLVARCRYLICSAGLHTSIVLPKHRTVNMFVEEGSC*
Ga0137372_109387582	3300012350	Vadose Zone Soil	MWQAEEGSAFLGIVTELVAEDAEGAWRVAEAASDVAGGLVIDEEGTEGLVLALQGELRGKEEVLIGRRRYLIRSAGLHKPIMLPKHEPVNLFWTARQ
Ga0137386_103224512	3300012351	Vadose Zone Soil	LTGFAHGNSQITDAVTGGRGLRPALRLSEERGAFLRVVAELETEDAKGARRIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGEEEVLVAKCRYLIRSAGLHTSIVLPKHVAVNMFG*
Ga0137386_106812672	3300012351	Vadose Zone Soil	AGGRGLRATLRLAEEGGAFLRIVAEQITQDAEGAGEIAEAAGDVGGRLLLDEVSAQGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMFKEKKTLLSTKQ*
Ga0137371_105185371	3300012356	Vadose Zone Soil	RRRLGAALWLAEEGSAFQGSVAELIAEDAEEAGGVPEAVGDVGGRLLLDEVSAQGFVLALHGELRGQEEVLVARCRYLIRSAGLHISMVLPKHGTVNMF*
Ga0137384_109464571	3300012357	Vadose Zone Soil	VAELIAEDAEEAGGIAEAASDVAGGLLIDEEGAEGFVLALQRELRGKEEVLVAGRSYLIRSAGLHISIVLPKHGIVNMVLESKDALSTKSQ*
Ga0137384_112283311	3300012357	Vadose Zone Soil	VAELITQDAEGAWGIAEAASDVARGFLIDEVGTEGFVLALQGKLGRQEEALIARSRYLIRSAGLHISIVLQEHYPVNMFWSVKAAAC*
Ga0137385_109344601	3300012359	Vadose Zone Soil	DAEGASRIAEAAGDVGGGLLLDEVGTQGFVLALQGELRGKEEVLVARCRYLIRGAGLHIQMMLPKHDVVNMFREGKEAAKHKT*
Ga0137385_112466832	3300012359	Vadose Zone Soil	GGRGLRPALRLSEERGAFLRVVAELITEDAKGARGIAEAAGDIGGGLLIDEVSTQGFVLALHGELRGEEEVLVARCRYLIRSAGLHTSIVLPKHVRVNMFG*
Ga0137360_115244261	3300012361	Vadose Zone Soil	SALWLAEEGSAFLRIVAELITQDAEGAWGIAEAASDVARGFLIDEVGTEGFVLALQGKLGRQEEALIARSRYLIRSAGLHISIVLQKHYPVNMFGA*
Ga0137359_115883471	3300012923	Vadose Zone Soil	GIVAELMAEDAEGARGVTETTGDLRRGLLIDEQGAEGLVLALHRELGRKEEVLVAWRRYLIGSAGRHT*
Ga0137419_114966641	3300012925	Vadose Zone Soil	KITDAVAGGSGLRCALWLAEEGSAFLRIVAKLMAQDAEGARGVTETTGDFSRRLVIDEEGTERFVLALQGELGGKEEILVARCRYLIRSAGLHISMVLQKQEAVNMF*
Ga0137404_112468012	3300012929	Vadose Zone Soil	WQAEEGSAFLRIVAELITEDAEGARRVAETTGDFGGRLFVDEVSTEGLVLALQGELRGQEEVLVGRCRYLIRSAGLHNQMVLQEHNAVNMF*
Ga0137404_115279021	3300012929	Vadose Zone Soil	QSTDPIAGGRGLRPALRLAEEGGAFLRVVAELITQNAEGAGRIAEAAGDVGGRLVLDEVSTQGFVLALHGELRRQEEVLVAWRRYVIDSAGLHIWIVLSKHGRVNMFE*
Ga0137407_117357071	3300012930	Vadose Zone Soil	TGGRGLVAAMRLAEERSAFFRVMAELIAEDAEEARRVAEAAGDFGRGLVIDEVSTEGFVLALQRKLRSQEEVLVAGCGYLIGSAGLHIRIVLPKHARVNMFGKKRNH*
Ga0134075_105818992	3300014154	Grasslands Soil	LRTALWLAEEGSALLRVVAKLIAEDAEEAGGVTEAAGDVAGRFLIDEVGTESFVLAQRELGGKEEVLVARCSYLIRSAGLHI*
Ga0181530_105672982	3300014159	Bog	RLAEEGGAFLRVVAELVTQDTEGAGRIAEAAGNVGGGLVLDEVSTEGLILALHGELRGEEEVLVARCGYLICSAGLHISIVLPKHGAVNYV*
Ga0181538_105453452	3300014162	Bog	VGIVAELIAEDAEGARRVAETTGDLGRGLLVDEEGTDGFVLALQGELGGKEEILVGGCRYLIGSAGLHNQMVLQEHEIVNMFGRGTGAGKHEMQVSKA*
Ga0181535_107411271	3300014199	Bog	LIAEDAEEAGRVTEAAGDVGGGFLIDEVGTEGLVLALQRELRGKEEGLVAECGYLIHGAGVHISIVLPKHGVVNMFGDKRGR*
Ga0075325_12206541	3300014270	Natural And Restored Wetlands	AFLGIVAELMAEDAEEAGGVAEAASDVGRGLLIDEVSTESFVLALHGELRGEEEVLVARCRYLIRSAGLHISMVLQKHWSVNMFGER*
Ga0075353_11517712	3300014321	Natural And Restored Wetlands	LRLAEEGGAFLRVVAELIAQDAEGAGGIAEAVGDVGGGLLLDEVSTEGFVLALQGELRGQEEVLVARRRYLIRSAGLNISIMLPKHGTVNMFGERRGCS
Ga0182011_100993552	3300014496	Fen	LRLAEEGGAFLRIVAELITQDAESARRVTEATGDIGRGLLLDEVSTEGFVLALHRELRGEEEVLVSRCRYLIRSAGLHISIVLPKHGTVNMFGKERGG*
Ga0182019_102204051	3300014498	Fen	ALGRRLRSALRQTEEGCAFLRVVAELMAEDAEGAGGIAEAAGDFGGGFFLDEVSAEGFVLALHGELRGEEEVLVARCRYLIHSAGLHISIVLPKHSAVNMFREKTGS*
Ga0181536_103461142	3300014638	Bog	FLRIVAELIAENAEGARGVAQTAGDLGGGLLIDEAGTEGFVLALQGELRGEKEVLVARYSYLISSAEVHIPIVLQKHCPVNMFWRRLRPPDIKYA*
Ga0182027_106986291	3300014839	Fen	HGNRQITDPIAGGGGLRSALRLAEEGGAFLRIVAELITQDAESARRVTEATGDIGRGLLLDEVSTEGFVLALHRELRGEEEVLVSRCRYLIRSAGLHISIVLPKHGTVNMFGKERGG*
Ga0180066_10036394	3300014873	Soil	LAEEGSAFLRVVAELLAEDAEGAGGVAEPAGDVAGGLLIDEEGTEGFVLALQRELRGKEEVLVARCRYLIRSAGLHIQMVLQKHHTVKMFWRAKRRLSTKCSQDAFGRI*
Ga0137403_115465251	3300015264	Vadose Zone Soil	NRQSPDPIAGGRGLRPALRLAEEGGAFLRVVAELITQNAEGAGRIAEAAGDVGGRLVLDEVSTQGFVLALHGELRRQEEVLVAWRRYVIDSAGLHIWIVLSKHGRVNMFE*
Ga0187801_101443711	3300017933	Freshwater Sediment	TLGLAEEGSALFGVVAELVAEDAKEALGVAEAASDIGRRLLIDEVSTEGFVLALQGELRGEEVVLVARCSYLIRSAGLHIQIVLQKHFSVNMFRE
Ga0187847_107445821	3300017948	Peatland	VAELITQDPEGAGGIAEAAGDIGGGLVLDEVSTEGFILALHGELGGQEEVLVGWCRYLIGSAGLHISIVLPKHGLVNMFGEGRGCYVETSRR
Ga0187817_110493221	3300017955	Freshwater Sediment	VVTELIAENAEGAGGIAEAAGDIGGGFLLDEVSTEGFILALHGELRGEEEILVTRCGYLFGSAGLYISIVLSKHGVVNMFGEERGG
Ga0187891_10832631	3300017996	Peatland	IADAIAGGRGLRPALRLAEEGGAFLRVVAELITQDAEGAGGIAEAAGDVGGGLVLDEVSTEGFILALHGELRGEEEVLVAGCRYLIRCARLHISMVLPKHGVVNMFREKRGR
Ga0184604_102621811	3300018000	Groundwater Sediment	MRTALWQAEEGSAFLGIVAELIAEDAEGAGGVAKTTGDIGRGLLIDEEGTESLVLALQGELRRKEEVLVAWCCYLIGSAGLHV
Ga0187878_13153351	3300018005	Peatland	LRATLWQAEEGSAFLRVVAELIAEDAEEAGRVTEAAGDVGGGFLIDEVGAEGFVLALQRELGGKEEGLVAESGYLISSAGLHISIVLPKHGVVNMFREKRGG
Ga0187882_12166892	3300018021	Peatland	GNRQITDAIAGRRRLRSTLRLAEEGGAFLRVVAELVTQDAEGAGGVAEAAGDVGGGLVLDEVSTEGFILALHGELRGEEEVLVAGCRYLIRCARLHISMVLPKHGVVNMFREKRGR
Ga0187887_109296561	3300018043	Peatland	LRVVAELVTQDAEGAGGIAEAAGDIGGGLVLDEVSTEGFILALHGELGGQEEVLVGWCRYLIGSAGLHISIVLPKHGLVNMFGEGRGCYVETSRR
Ga0187851_105727921	3300018046	Peatland	YPLFVVYSKRKKAATLAEAAGDVGGGLVLDEVSTEGFILALHRELRGEEEVLVPRCRYLIGSAGLHISIVLPKHGLVNMFGEGRGCYVETSRR
Ga0066667_114370461	3300018433	Grasslands Soil	QITDAVAGGRGLRPALRLAEEGGAFLRVVAELITEDAEGASGIAEAAGDVGGGLLLDEVGTQGFVLALHGELRGEEEVLVARCCYLIGSAGLHIPIVLQKHSAVNMFGDQRRR
Ga0066662_130065971	3300018468	Grasslands Soil	SQITDAVAGGRGLRTTLWQAEEGSAFLGIVTELITKDAEGAGRIAEAAGDVAGGLLINEVGAEGFVLALQGELGGKEEVVVVGCRYLICSAGLHIQMVL
Ga0066669_107360432	3300018482	Grasslands Soil	MAELMAEDSEGTGGVAETTGDVAGGLLLNEVSTEGFVLALHGELRGQEEVLVARRRYLIRSAGLHISMMLPKHRTVNMFSEEKRLPSKKISNQGMNGV
Ga0193724_10870411	3300020062	Soil	LRAAMWQAEEGSAFLRIVAKLIAKDAEEAGGVTEAASDVAGGLLIDEEGAEGFVLALQGELRGKEEVLIARCGYLICSAGLHIEIVLQKHEAVNMFGGQGRR
Ga0210379_101959231	3300021081	Groundwater Sediment	VAELLAEDAEGAGGVAEPAGDVAGGLLIDEEGTEGFVLALQRELRGKEEVLVARCRYPIRSAGLYIQMVLQKHHTVKMFWRAKRRLSTKCSQDAFGRI
Ga0210400_100035278	3300021170	Soil	MWQAEKGSAFLRIVAELMAEDAEGARGVAETAGHVAGRFFIDEVSAEGFVLALQGEQRGKEEVPVARCRYLIRGAGRHIQIMLPKHDVVNMFREDKEAAKHET
Ga0210362_15247442	3300021329	Estuarine	FGSGAELMTEDAEGAWGVTEAAGDVGGGFVIDEEGTEGFVLSLEGELRGEEEVLVARCRYLIRSAGVHN
Ga0209158_12882231	3300026333	Soil	QITDAVAGGRRLRSALWLAEEGRAFQGIVAELMAEDAEGAAGVTETTGDFSRRLVIDEEGTERFVLALQGELGGKEEILVARCRYLIRSAGLHISMVLQKQEAVNMF
Ga0257163_10715431	3300026359	Soil	HGYRQMPNTVAGGRGLRTALWLAEEGSAFLGIVAELIAEDAEGAGGVAEAAGHVAGWLLIDEEGAEGFVLALQRELRGKEETLVGR
Ga0208043_10662263	3300027570	Peatlands Soil	MEESASIWKNWTASEIPFSELIAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGRKEEVLVSRYRYLIRSAGLHIQMMLPKHGAVNLF
Ga0208044_11375152	3300027625	Peatlands Soil	LRVVTELMAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF
Ga0208696_10957422	3300027696	Peatlands Soil	MEESASIWKNWTASEIPFSELIAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQKHEAVNLF
Ga0209517_104960561	3300027854	Peatlands Soil	VTELMAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF
Ga0209698_112445101	3300027911	Watersheds	AEEGSAFLRVVAELIAEDAEGARRVAETTGNVGRGLLIYEESTDGFVLALQRELRGKEEVLVSRCRYLIRSAGLHIEMMLQKHEAVNLFCEQGRR
Ga0307282_104754661	3300028784	Soil	LWAAMWLAEEGSAFQGVVAELIAEDAEEAGGLPGAAGDVGGRLLIDEVRTEGFVLALQGELRGKEEVLIARCGYLICSAGLHIEIVLQKHE
Ga0310039_100278663	3300030706	Peatlands Soil	MAEDAEGAGGVAEAASDVGGWLVIDEEGTEGFVLALQGELGGKEEVLVGRCRYLIRSAGLHIQMMLQEHGAVNLF
Ga0310686_1078872172	3300031708	Soil	AEEGSAFLGIVAELMAEDAEGARGVAETAGHVAGRLFIDEVSAEGFVLALQGELRGKEEVPVARCRYLICGAGRHIQMMLPKHDVVNMFRDYKEAAKHET
Ga0302322_1021354341	3300031902	Fen	LRTAMRQAEEGSAFLGIVAELIAEDAEGAWRVAETASDVAGGLVIDEEGAEGLVLALQGELRGKEEVLVGRRRYLIRSAGLHKQMMLPKHEPVNLFWTTREAGSITSKQQRHTM
Ga0307470_111848841	3300032174	Hardwood Forest Soil	RTAMWQAEKGSAFLRIVAELMAEDAEGARGVAETAGHVAGRFFIDEVSAEGFVLALQGEQRGKEEVPVARCRYLIRGAGRHIQIMLPKHDVVNMFREDKEAAKHET
Ga0335085_109098301	3300032770	Soil	STLRLAEEGGAFLRVVAELVTQDAEGTGGVAEAAGDVGRGLVLDEVSAEGFILALHGELRGQEEVLVGWRRYLIRSAGFHISIVLPKHGVVNMFREGRGS
Ga0316620_115897591	3300033480	Soil	NRKIAFAHGNRQITDAIAGGRRLRSAMRLAEEGGAFLRVVAELMTQDAEGAGGIAEAAGDVGGGLILEEVRTEGLILTLHGELRGQEEVPVGGGGYLIRSAGLHISIVLPKHRVVNMFREKGGD
Ga0371489_0130328_1043_1402	3300033755	Peat Soil	VAGGSQFALDVIDREIPFSHSNGQIPDAIAGGRRLRSALRLVEEGGAFLRVVAELITQDAEGAGGIAEAAGDIGGGLVLEEVSTEGFILALHGELRGEEEVLVGGCRYLIRRAGLHVSMV
Ga0371487_0071159_90_482	3300033982	Peat Soil	VAGGSQFALDVIDREIPFSHSNGQIPDAIAGGRRLRSALRLVEEGGAFLRVVAELITQDAEGAGGIAEAAGDIGGGLVLEEVSTEGFILALHGELRGEEEVLVGGCRYLIRRAGLHVSMVLPKHSVVNMF
Ga0373912_0193262_62_319	3300034088	Sediment Slurry	LAEEGGAFLRVVAELITQNAEGAGGVAEAAGDVAGGLLIDEVGTESFVLALQGELGGEEEVVVASCRYLIRSAGLHICIMLQKHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences