Metagenome Family F074295

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074295
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	62 residues
Representative Sequence	MTRLRLILLLLPLVLFQAGCSGSATTPDANNVDANGQPVSSVPWNKPESWETTGQLGGMT
Number of Associated Samples	58
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.72 %
% of genes near scaffold ends (potentially truncated)	24.37 %
% of genes from short scaffolds (< 2000 bps)	79.83 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.992 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.218 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.68% β-sheet: 2.27% Coil/Unstructured: 67.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00588	SpoU_methylase	47.06
PF05991	NYN_YacP	5.88
PF01416	PseudoU_synth_1	4.20
PF03652	RuvX	1.68
PF03016	Exostosin	1.68
PF12850	Metallophos_2	0.84
PF00188	CAP	0.84
PF03462	PCRF	0.84
PF14257	DUF4349	0.84
PF01546	Peptidase_M20	0.84
PF00160	Pro_isomerase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	47.06
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	47.06
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	47.06
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	5.88
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	4.20
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	1.68
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.84
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.84
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	42.86 %
Unclassified	root	N/A	21.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.04 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	42.86 %
Unclassified	root	N/A	21.01 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	14.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.04 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	14.29 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	5.04 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.52 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	13.45 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	4.20 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.52 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	5.88 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	4.20 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.52 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	4.20 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	4.20 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.52 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.01 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	4.20 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	4.20 %
Verrucomicrobia bacterium Tous-C9LFEB	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	2.52 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100950891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300009500\|Ga0116229_10077979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3076	Open in IMG/M
3300009500\|Ga0116229_10080301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3017	Open in IMG/M
3300009500\|Ga0116229_11114016	Not Available	632	Open in IMG/M
3300009500\|Ga0116229_11218635	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009651\|Ga0105859_1144235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	669	Open in IMG/M
3300009697\|Ga0116231_10074887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	2216	Open in IMG/M
3300009697\|Ga0116231_10102290	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300009709\|Ga0116227_10844251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	690	Open in IMG/M
3300009787\|Ga0116226_10139980	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300009787\|Ga0116226_10995290	Not Available	807	Open in IMG/M
3300009787\|Ga0116226_11406986	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300011418\|Ga0153954_1121189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	651	Open in IMG/M
3300012177\|Ga0153943_1078462	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300014168\|Ga0181534_10038125	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300014168\|Ga0181534_10212765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1014	Open in IMG/M
3300014169\|Ga0181531_10488764	Not Available	760	Open in IMG/M
3300014169\|Ga0181531_10524379	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300014169\|Ga0181531_10927404	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300014201\|Ga0181537_10064605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2480	Open in IMG/M
3300014201\|Ga0181537_10366004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	989	Open in IMG/M
3300014201\|Ga0181537_10440780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	893	Open in IMG/M
3300014489\|Ga0182018_10030855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3410	Open in IMG/M
3300014489\|Ga0182018_10175852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1210	Open in IMG/M
3300014491\|Ga0182014_10450452	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300014496\|Ga0182011_10585605	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300014499\|Ga0182012_10074218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2635	Open in IMG/M
3300014499\|Ga0182012_10348093	Not Available	988	Open in IMG/M
3300014499\|Ga0182012_10471281	Not Available	819	Open in IMG/M
3300014499\|Ga0182012_10792980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300014501\|Ga0182024_10001322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	64166	Open in IMG/M
3300014654\|Ga0181525_10341081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	820	Open in IMG/M
3300014654\|Ga0181525_10482639	Not Available	685	Open in IMG/M
3300014654\|Ga0181525_10870759	Not Available	510	Open in IMG/M
3300014657\|Ga0181522_10251070	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1046	Open in IMG/M
3300014838\|Ga0182030_10002963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36168	Open in IMG/M
3300014838\|Ga0182030_10349106	Not Available	1583	Open in IMG/M
3300014838\|Ga0182030_10468586	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300014838\|Ga0182030_11367787	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300015206\|Ga0167644_1008852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	5171	Open in IMG/M
3300021478\|Ga0210402_10140824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2192	Open in IMG/M
3300026319\|Ga0209647_1171599	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300027860\|Ga0209611_10045249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	3688	Open in IMG/M
3300027860\|Ga0209611_10079994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	2307	Open in IMG/M
3300027908\|Ga0209006_10317839	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300028536\|Ga0137415_10762056	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300028552\|Ga0302149_1144100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	619	Open in IMG/M
3300028745\|Ga0302267_10034822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3130	Open in IMG/M
3300028779\|Ga0302266_10077692	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300028779\|Ga0302266_10127511	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300028779\|Ga0302266_10132895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	987	Open in IMG/M
3300028866\|Ga0302278_10244275	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300029882\|Ga0311368_10056280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3558	Open in IMG/M
3300029910\|Ga0311369_10218808	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300029911\|Ga0311361_10098638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4162	Open in IMG/M
3300029911\|Ga0311361_10143241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3167	Open in IMG/M
3300029911\|Ga0311361_10529319	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300029911\|Ga0311361_10950977	Not Available	729	Open in IMG/M
3300029911\|Ga0311361_11451141	Not Available	522	Open in IMG/M
3300029915\|Ga0311358_10023017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8068	Open in IMG/M
3300029915\|Ga0311358_10465474	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300029915\|Ga0311358_10638441	Not Available	795	Open in IMG/M
3300029915\|Ga0311358_10808446	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300029922\|Ga0311363_11025691	Not Available	720	Open in IMG/M
3300029922\|Ga0311363_11338682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	589	Open in IMG/M
3300029922\|Ga0311363_11627903	Not Available	508	Open in IMG/M
3300029951\|Ga0311371_11026875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	977	Open in IMG/M
3300029951\|Ga0311371_11236385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	859	Open in IMG/M
3300029952\|Ga0311346_10437992	Not Available	1247	Open in IMG/M
3300029952\|Ga0311346_10940642	Not Available	706	Open in IMG/M
3300029953\|Ga0311343_11142346	Not Available	599	Open in IMG/M
3300029953\|Ga0311343_11280228	Not Available	554	Open in IMG/M
3300029954\|Ga0311331_10592574	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300029999\|Ga0311339_10875187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	856	Open in IMG/M
3300029999\|Ga0311339_11765178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	539	Open in IMG/M
3300030007\|Ga0311338_11203479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	719	Open in IMG/M
3300030007\|Ga0311338_11948309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300030041\|Ga0302274_10410419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300030503\|Ga0311370_10352964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1873	Open in IMG/M
3300030503\|Ga0311370_12048103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	570	Open in IMG/M
3300030507\|Ga0302192_10273023	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300030507\|Ga0302192_10306673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	661	Open in IMG/M
3300030518\|Ga0302275_10501819	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300030520\|Ga0311372_11179932	Not Available	984	Open in IMG/M
3300030520\|Ga0311372_11353308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	894	Open in IMG/M
3300030520\|Ga0311372_12224446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	630	Open in IMG/M
3300030617\|Ga0311356_10943020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	810	Open in IMG/M
3300030688\|Ga0311345_10926731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	665	Open in IMG/M
3300031234\|Ga0302325_10683602	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300031234\|Ga0302325_10962774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1173	Open in IMG/M
3300031236\|Ga0302324_100109267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	4655	Open in IMG/M
3300031236\|Ga0302324_100436811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1937	Open in IMG/M
3300031236\|Ga0302324_100547522	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300031236\|Ga0302324_100699595	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300031236\|Ga0302324_101861095	Not Available	762	Open in IMG/M
3300031236\|Ga0302324_102128247	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031236\|Ga0302324_102171086	Not Available	690	Open in IMG/M
3300031236\|Ga0302324_102275177	Not Available	670	Open in IMG/M
3300031236\|Ga0302324_102795596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	587	Open in IMG/M
3300031236\|Ga0302324_102823255	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031236\|Ga0302324_103099892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300031259\|Ga0302187_10313960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	766	Open in IMG/M
3300031259\|Ga0302187_10439210	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300031261\|Ga0302140_10486797	Not Available	962	Open in IMG/M
3300031524\|Ga0302320_10222434	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300031524\|Ga0302320_10265687	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300031524\|Ga0302320_11001931	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031524\|Ga0302320_11510795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	660	Open in IMG/M
3300031524\|Ga0302320_12037535	Not Available	537	Open in IMG/M
3300031525\|Ga0302326_10872875	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031525\|Ga0302326_12475760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	652	Open in IMG/M
3300031525\|Ga0302326_12724317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium Tous-C9LFEB	613	Open in IMG/M
3300031525\|Ga0302326_12738317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300031708\|Ga0310686_109575057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	709	Open in IMG/M
3300031788\|Ga0302319_11132081	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300032895\|Ga0335074_10785791	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300033887\|Ga0334790_040682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1816	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.31%
Aquatic	Environmental → Aquatic	10.92%
Plants	Host-Associated → Plants	10.08%
Fungi	Host-Associated → Fungi	1.68%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	59.66%
Soil	Environmental → Terrestrial → Soil	17.65%
Freshwater	Environmental → Aquatic → Freshwater	10.92%
Peat Moss	Host-Associated → Plants → Peat Moss	10.08%
Mycelium	Host-Associated → Fungi → Mycelium	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	59.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.92%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	10.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.20%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.68%
Loam	Environmental → Terrestrial → Soil → Loam	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	59.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.92%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	10.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	26.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.08%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	10.08%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.36%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1009508912	3300004082	Bog Forest Soil	MRVRKLLLLVPVVLIQAGCSNSGTVPAAENVDSNGQPVSAVPWNKPESWETSGQLGGMSGQ*
Ga0116229_100779794	3300009500	Host-Associated	MIRLRLLVLLIPVALLQVGCASSDTSPTAGNVDASGNTVSSVPWNKPESWETGGQLGNAMGQ*
Ga0116229_100803013	3300009500	Host-Associated	MTRLRLLLILLPVTLLQVGCASSADTSPSAGNVDASGNAVSSTPWNKPESWETGGQIGNAMGQ*
Ga0116229_111140162	3300009500	Host-Associated	MDRVRKLFLLSPLALTLAACSGPTTSPPAETVDSNGTPVSAVPWNKPESWETSGQLGGAMQQ*
Ga0116229_112186352	3300009500	Host-Associated	MTRLRLLLILLPVALLQVGCATSADSSPSAGNIDASGNPVSSTPWNKPESWETGGQLGNAMGN*
Ga0105859_11442352	3300009651	Permafrost Soil	RRMTRFRSILLLVPLVLLQAGCSSSATTPAADNVDSNGQPVSAVPWNKPESWETTGQLGGMMQ*
Ga0116231_100748873	3300009697	Host-Associated	MTRLRTFLLLAPLVLTLGGCSGPSTSPAAENVDSNGNAVSAVPWNKPESWETGGQLGGMTQQ*
Ga0116231_101022902	3300009697	Host-Associated	MIRLPKLLLLAPLALLLGACSGPATTPPPNNVDANGNQVSSVPWNKPESWETGGQLSGAMGQQ*
Ga0116227_108442511	3300009709	Host-Associated	LTRYMTRLRLLLILLPVALFQVGCASTDTSPTAGNIDASGNAVSSTPWNKPESWETGGQLGNAMGQ*
Ga0116226_101399804	3300009787	Host-Associated	MTRLRSLLLLAPLALLQAACSGTSNTPPPDNVDANGQSVSAVPWNKPESWETNGQLGAMGQ*
Ga0116226_109952901	3300009787	Host-Associated	MIRLPKLLLFAPLALMLGACSGPATTPPPNNVDANGNQVSSVPWNKPESWETGGQLSGAMGQQ*
Ga0116226_114069862	3300009787	Host-Associated	MTRLRCLLLLLPLAFFQVGCASTDTSPSAGNVDADGNTVSSVPWNKPESWETSGQLGNAMGH*
Ga0153954_11211892	3300011418	Attine Ant Fungus Gardens	MKRFSWLLLLPVVWLQCGCASTDTASNVPAPDNIDSNGQAVSSVPWNKPESWETSGQMGGMMNNH*
Ga0153943_10784622	3300012177	Attine Ant Fungus Gardens	MTRFRLTLLLLPLVLVQVGCSNTNTSPSTGNVDANGQPVSSVPWNKPEQWETTGQLGGLTQ*
Ga0181534_100381254	3300014168	Bog	MLRLRSILLLIPLALLQIGCSSTTSVPTANNVDANGQPVSAVPWNKPESWETGGQLGGMSQ*
Ga0181534_102127652	3300014168	Bog	MRRLRLILLFLPVVLFQAGCSSADTATSSANVDANGQQVSSVPWNKPESWETQGQLGGMQQGQ*
Ga0181531_104887642	3300014169	Bog	MRRLRLILLLLPVVLFQAGCSSADTATSSANVDANGQQVSSVPWNKPESW
Ga0181531_105243792	3300014169	Bog	MICSMTRLRLLLLLLPLVVLQTGCAGNDTSPSAGNIDSSGQPVSSVPWNKPEQWETTGQLGGMTGQ*
Ga0181531_109274042	3300014169	Bog	MTRLRSILLLVSLVLLQAGCSSSATVPAADNVDANGQPVSAVPWNKPESWETSGQLGGMSQ*
Ga0181537_100646054	3300014201	Bog	MRRLRLILLLLPVVLFQAGCSSADTATSSANVDANGQQVSSVPWNKPESWETQGQLGGMQGQ*
Ga0181537_103660042	3300014201	Bog	MIRLRTLLLLAPLALMQVACSGSSTTPPAENVDSNGQPVSAVPWNKPESWETSGQLGNMTQ*
Ga0181537_104407803	3300014201	Bog	MTRLRLLFVLVPVAFFQVACSNADTSPTAGNVDAEGNPVSSVPWNKPEAWETDGQLGGLTGH*
Ga0182018_100308556	3300014489	Palsa	MLRLRSILLLIPLALLGCSSSATTPTSQNLDANGQPVSSVPWNKPESWETTGQLGGMTQ*
Ga0182018_101758521	3300014489	Palsa	MHYLRLFLLFVPMAFIGCSTNDTSPSGGNVDASGQPVSSVPWNKPESWETNGQLGAMTQ*
Ga0182014_104504522	3300014491	Bog	MTRLRSFLLLIPLVLLQAGCSSSATTPAANNIDANGQPVSSVPWNKPESWETTGQLGGMTH*
Ga0182011_105856052	3300014496	Fen	MSHLRLILLLVPLVLLQAGCSGSATTPAANNVDANGQSVSSVPWNKPESWETTGQLGGMSGH*
Ga0182012_100742185	3300014499	Bog	MRRLYLILLLLPVVLFQTGCSSADTSPSTGNIDANGQPVSSVPWNKPESWETEGQMGAAMGQ*
Ga0182012_103480931	3300014499	Bog	MTRLRLLLLLLPVALVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPESWETSGQ
Ga0182012_104712811	3300014499	Bog	LAPTKVSFGVTRSYLLDNLCCMIRLRSILLFLPLGLFLAGCSDSPPPPSAENVDSNGQPVSYVPWNKPESWE
Ga0182012_107929802	3300014499	Bog	MTRLRCLLLLLPIAFIQVGCSSADTSPSAGNVDANGNTVSSVPWNKPESWETEGQLGNAMGN*
Ga0182024_1000132247	3300014501	Permafrost	MTRLRCLLLLLPIALIQVGCSSADTSTSNGNVDAEGNTVSSVPWNKPESWETQGQLGNAMGN*
Ga0181525_103410812	3300014654	Bog	MRRLRLILLLLPVVLFQAGCSSADTATSSANVDANGQQVSSVPWNKPESWETQGQLGGLQGQ*
Ga0181525_104826391	3300014654	Bog	AFAAISPAMTRLRTLLLLIPLALMQVACSGSADTPAANNVDANGNTVSAVPWNKPESWETNGQLGQLGQ*
Ga0181525_108707592	3300014654	Bog	MRRLCLLFLLLPVVMFQTGCSTADNSPSAGNVDANGNQVSSVPWNKPESWETQGQLGGLQQ*
Ga0181522_102510702	3300014657	Bog	MRRLRLILLLLPVVLFQAGCSSADTATSSANVDANGQQVSSVPWNKPESWETQGQLGGMQQGQ*
Ga0182030_1000296333	3300014838	Bog	MTRFRSILLLLPLVLLQAGCSSSATAPAANNVDANGQPVSSVPWNKPESWETTGQLGGMTQ*
Ga0182030_103491062	3300014838	Bog	MSRLRLILLLSPLVILLAGCSSNATVPSSENVDSNGQPVSSVPWNKPESWETTGQLGGMTQ*
Ga0182030_104685863	3300014838	Bog	MIRLRTLLLLAPLALMQVACSGPATTPAAENVDSNGQAVSAVPWNKPESWESNGQLGAMSQ*
Ga0182030_113677871	3300014838	Bog	SAMLCLIRDMSRLRLILLLSPLVLLLAGCSSNATVPSADNVDANGQPVSAVPWNKPESWETTGQLGGMTR*
Ga0167644_10088525	3300015206	Glacier Forefield Soil	MTCLRCLLLLLPVAFFQVGCSSADTSTSSGNVDANGNTVSSVPWNKPESWETQGQLGNAMGN*
Ga0210402_101408242	3300021478	Soil	MTRFRLTLLLLPLILVQVGCSNTDTSPSAGNVDANGQPVSSVPWNKPEQWETTGQLGGMT
Ga0209647_11715992	3300026319	Grasslands Soil	MCSIRSMTRLRLILLLLPLALFQAGCSSNSTATSQNNVDANGQPVSSVPWNKPESWETSGQLGNAMGH
Ga0209611_100452496	3300027860	Host-Associated	MIRLRLLVLLIPVALLQVGCASSDTSPTAGNVDASGNTVSSVPWNKPESWETGGQLGNAMGQ
Ga0209611_100799945	3300027860	Host-Associated	MTRLRLLLILLPVTLLQVGCASSADTSPSAGNVDASGNAVSSTPWNKPESWETGGQIGNAMGQ
Ga0209006_103178393	3300027908	Forest Soil	MTRLRLILLLLPLVLFQAGCSGSATTPDANNVDANGQPVSSVPWNKPESWETTGQLGGMT
Ga0137415_107620562	3300028536	Vadose Zone Soil	MTRLRLILLLLPVVLFQAGCASDSASTSPSAGNIDSNGQPVSSVPWNKPESWETSGQLGNAMGH
Ga0302149_11441002	3300028552	Bog	MLRLRPILLLIALALLQMGCSSTTPTPSADNIDANGQPVSAVPWNKPESWETSGQLGGMS
Ga0302267_100348223	3300028745	Bog	MLRLRTILLLLPLALVQVGCSSNATVPSAENVDSSGQPVSSVPWNKPESWETTGQLGGLSGQ
Ga0302266_100776923	3300028779	Bog	MTRLRSILLLVSLVLFQAGCSGSATVPSADNVDANGQPVSAVPWNKPETWETTGQLGGMT
Ga0302266_101275113	3300028779	Bog	MLRFRTLLLLLPLALFQVGCSSSATTPTTSNVDANGQPVSSVPWNKPESWESTGQLGGMT
Ga0302266_101328953	3300028779	Bog	MIRLRSILLLLPLALIQAGCSSSSTVPAAQNVDSNGQPVSSVPWNKPESWETTGQLGGMT
Ga0302278_102442752	3300028866	Bog	MILIRSILLFCPLVLFLAGCSGTPEAPAAQNVDSNGQPVSAVPWNKPESWETTGQLGGMT
Ga0311368_100562804	3300029882	Palsa	MIRLRTLLLLLPVALFQVGCSSSTSSDDVDANGQQVSSVPWNKPESWETSGQLGGMTQH
Ga0311369_102188082	3300029910	Palsa	MKRMRLILLLLPVVLFQAGCATSNTSPEGGNIDASGQPVSSVPWNKPESWETNGQLGGMTGQ
Ga0311361_100986385	3300029911	Bog	MIRLCLILVLLPVVLLQAGCSSSSSSTPSANDVDANGQPVSSVPWNKPESWETQGQLGGMTQ
Ga0311361_101432412	3300029911	Bog	MLRLRPLLLLLPLALFQVGCSATTPTAQDVDANGQPVSSVPWNKPETWETTGQLGGMTQ
Ga0311361_105293192	3300029911	Bog	MIRLRSILLLLPLALLQVGCSGSGTTPAPDNVDANGQPVSSVPWNKPESWETTGQLGGMA
Ga0311361_109509771	3300029911	Bog	MIRLRTLLLLAPLALMQVACSGPSTTPPPDNVDSNGQSVSAVPWNKPEQWETAGQLG
Ga0311361_114511411	3300029911	Bog	MLRLRPLLLLLPLALFQVGCSGSATTPTSSNVDANGQPVSAVPWNKPETWETTGQLGGLT
Ga0311358_100230174	3300029915	Bog	PLLFVRQSPVMSRLRLILLLSPLVILLVGCSGNATVPTAENVDSNGQPVSAVPWNKPESWETTGQLGGMTQ
Ga0311358_104654743	3300029915	Bog	LAPTKVSFGVTRSYLLDNLCCMIRLRSILLFLPLGLFLAGCSDSPPPPSAENVDSNGQPVSSVPWNKPESWETTGQLGGMTQ
Ga0311358_106384412	3300029915	Bog	MKRVRLILLFVPLVLPLAGCSSNATTPTTSNVDASGQPVSAVPWNKPENWETTGQLGGMT
Ga0311358_108084462	3300029915	Bog	MSRLRLILLLSPLVLLLVGCSGNATVPSSDNVDANGQPVSAVPWNKPESWETTGQLGGMT
Ga0311363_110256912	3300029922	Fen	MSRLRLILFVLLLPVILFQSGCSSTATAPAADNVDANGQPVSSVPWNKPESWETQGQLGGLSQ
Ga0311363_113386822	3300029922	Fen	MMRLRLILLLLPVVVLAGCASTSPAPTANNVDAEGNTVSSVPWNKPESWETSGQLGGVG
Ga0311363_116279032	3300029922	Fen	LAPTKVSFGVTRSYLLDNLCCMIRLRSILLFLPLGLFLAGCSDSPPPPSAENVDSNGQPVSSVPWNKPESWE
Ga0311371_110268752	3300029951	Palsa	VTRAYFLGNLRRMIRLRSLLLLLPLALFQAGCSSSSTTPAAENVDSNGQPVSSVPWNKPESWETSGQLGGMTQ
Ga0311371_112363852	3300029951	Palsa	MCLIRCMTRLRLLLLLLPLAFVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPEQWETGGQLGNAMGQ
Ga0311346_104379922	3300029952	Bog	MSRLRLILLLSPLVILLVGCSGNATVPTAENVDSNGQPVSAVPWNKPESWETTGQLGGMT
Ga0311346_109406421	3300029952	Bog	MKRLRFFLLFLPVILFQTGCSNANPSPTSGNLDSDGNQVSSVPWNKPESWETQGQLGGMAGATGH
Ga0311343_111423461	3300029953	Bog	LAPTKVSFGVTRSYLLDNLCCMIRLRSILLFLPLGLFLAGCSDSPPPPSAENVDSNGQPVSSVPWNKPE
Ga0311343_112802282	3300029953	Bog	MLRLRPLLLLLPLALFQVGCSATTPTAQDVDANGQPVSSVPWNKPETWETTGQ
Ga0311331_105925742	3300029954	Bog	MIHLRLLFLVVPFALLQVGCASSDSSPSAGNVDASGNTVSSVPWNKPESWETGGQLGNAMGN
Ga0311339_108751872	3300029999	Palsa	MISLRTLLLLIPLALMQVACSGNANTPAANNVDANGNTVSSVPWNKPESWETNGQLGQLG
Ga0311339_117651781	3300029999	Palsa	TRRMTRLRSLLLLVPVVLFQVGCSSTATPSANNVDANGQQISSVPWNKPEEWETTGQLGGMTQ
Ga0311338_112034792	3300030007	Palsa	MFRLRSILFLLPLALFQAGCSSSATTPTANNVDANGQPVSAVPWNKPESWETNGQLGGMS
Ga0311338_119483092	3300030007	Palsa	MRSLRILVLLAPTVLFLAGCSSADTSVENGNVDANGQPVSSVPWNKPENWETQGQLGGLG
Ga0302274_104104192	3300030041	Bog	PILLLIALALLQMGCSSTTPTPSADNIDANGQPVSAVPWNKPESWETSGQLGGMSQ
Ga0302281_103483432	3300030044	Fen	MTRLRLLLFLLPVVLFQTGCASSATPPAANNIDADGNQVSSVPWNKPESWESQGQLGAMGGAH
Ga0311370_103529644	3300030503	Palsa	MTRLRLLLLLLPLAFVQVGCSSADSSPSAGNVDANGQTVSSVPWNKPESWETGGQLGNAMGN
Ga0311370_120481031	3300030503	Palsa	LPLVLLQAGCSDSTTTPAANNVDANGQPVSAVPWNKPESWETNGQLGGMSQ
Ga0302192_102730232	3300030507	Bog	MILIRSILLFCPLVLLLTGCSGTPEAPAAQNVDSNGQPVSAVPWNKPESWETTGQLGGMT
Ga0302192_103066732	3300030507	Bog	LPLALVQVGCSSNATVPSAENVDSSGQPVSSVPWNKPESWETTGQLGGLSGQ
Ga0302275_105018191	3300030518	Bog	PLFGVTEPWFSYSLNPMLRFRTLLLLLPLALFQVGCSSSATTPTTSNVDANGQPVSSVPWNKPESWESTGQLGGMTQ
Ga0311372_111799321	3300030520	Palsa	MTRLRLLLLLLPVALVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPEQWET
Ga0311372_113533082	3300030520	Palsa	MTRLRLILLLLPVVLLQTGCAGSNADTSPSAGNVDSSGQPVSSVPWNKPESWETQGQLGALSGH
Ga0311372_122244461	3300030520	Palsa	PLAFVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPEQWETGGQLGNAMGQ
Ga0311356_109430202	3300030617	Palsa	MIRLRLILFLVPLALFQVGCSSSATTPSANNVDANGQPVSAVPWNKPESWETNGQLGGMS
Ga0311345_109267311	3300030688	Bog	MTRLRLLLLLLPVALVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPESWETGGQLGNAMGQ
Ga0302325_106836022	3300031234	Palsa	MTPFRLLLLLIPVALFQVGCSSSDTSPSAGNVDANGNTVSSVPWNKPEGWETGGQLGNALGN
Ga0302325_109627742	3300031234	Palsa	MRSLRFLILLAPTVLFLAGCSSADTSVENGNVDANGQPVSSVPWNKPENWETQGQLGGLG
Ga0302324_1001092677	3300031236	Palsa	MTRLRLILFLLPVVLLQAGCSSTDTSPTGNVDANGQPVSSVPWNKPEEWETTGELGGMTQ
Ga0302324_1004368113	3300031236	Palsa	MRSLRFLVLLAPTVLFLAGCSSADTSVENGNVDANGQPVSSVPWNKPENWETQGQLGGLG
Ga0302324_1005475222	3300031236	Palsa	MRRFSLLLLLLAAVLFQVGCSSADTSPTTGNVDANGNTVSSVPWNKPESWETQGQLGGLGAGQ
Ga0302324_1005616433	3300031236	Palsa	MCLTKGMRRLYLILLLLPVVLFQTGCSSTDTSPSTGNIDANGQPVSSVPWNKPESWETEGQMGAAMGQ
Ga0302324_1006995953	3300031236	Palsa	MSRLRLIFLLVPLALVQVGCSSSATTPAADDIDSNGQPVSSVPWNKPESWETNGQLGGMA
Ga0302324_1018610952	3300031236	Palsa	MKRVCSILLLPLVLVTAGCSSTATTPTTQNVDANGQPVSAVPWNKPESWETQGQLGGMQQ
Ga0302324_1021282472	3300031236	Palsa	MTRLRSILLLLPLVLLQAGCSDSTTTPAANNVDANGQPVSAVPWNKPESWETTGQLGGAMGN
Ga0302324_1021710862	3300031236	Palsa	MTRLRLLLLLLPVTLVQVGCAASDTSPSAGNVDANGNTVSSTPWNKPESWETDGQLGNAMGQ
Ga0302324_1022751771	3300031236	Palsa	MIRLRTLLLLIPLALMQVACSGSADAPPPDNVDANGKTVSAVPWNKPESWETNGQLGQLG
Ga0302324_1027955961	3300031236	Palsa	MIRLRLLLFLLPVVLFQAGCSSASNTAPSANDIDANGQPVSSVPWNKPESWETQGQLGGMTQ
Ga0302324_1028232552	3300031236	Palsa	MTRLRLLLVLVPAAFFQVACSNADTSPSAGNVDAEGNQVSSVPWNKQESWETDGQLGGLTGH
Ga0302324_1030998921	3300031236	Palsa	MTRLRRLLLLLPVALFQVGCASSDTSPSAGNVDAGGNTVSSVPWNKPESWETTG
Ga0302187_103139601	3300031259	Bog	MIRLRSILLLLPLALIQAGCSSSSTVPAAQNVDSNGQPVSSVPWNKPESWETTGQLG
Ga0302187_104392102	3300031259	Bog	LLLLPLALVQVGCSSNATVPSAENVDSSGQPVSSVPWNKPESWETTGQLGGLSGQ
Ga0302140_104867971	3300031261	Bog	MIRLCLILVLLPVVLLQAGCSSSSSSTPSANDVDANGQPVSSVPWNKPESWETQGQLG
Ga0302320_102224345	3300031524	Bog	LRSILFLLPLVLFQVGCSSSATTPSANDVDANGQPVSSVPWNKPESWETTGQLGGMTQ
Ga0302320_102656872	3300031524	Bog	MNLSKGQEIFRRDPLLFFRQSPVMSRLRLILLLSPLVILLVGCSGNATVPTAENVDSNGQPVSAVPWNKPESWETTGQLGGMTQ
Ga0302320_110019312	3300031524	Bog	KAIFKSAILCLISRMIRLRSILLLLPLALFQVGCSGSATTPAANNVDANGQPVSSVPWNKPETWETTGQLGGLTQ
Ga0302320_115107952	3300031524	Bog	MTRLRSILLLVSLVLLQAGCSGSATTPADDNVDANGQPVSSVPWNKPESWETTGQLGGMT
Ga0302320_120375352	3300031524	Bog	MISLRTLLLLVPLALMQVACGTSANTPAANNVDANGNTVSAVPWNKPESWETQGQLGAMG
Ga0302326_108728752	3300031525	Palsa	MTRLRSLFLLVSLVLVQAGCSSEATTPTANNVDANGQPVSAVPWNKPETWETTGQLGGMA
Ga0302326_124757602	3300031525	Palsa	MTRLRLLLVLVPVAFFQVACSNTDTSPSAGNIDSTGQPVSSVPWNKQESWETGGQLG
Ga0302326_127243172	3300031525	Palsa	MRRFSLLLLLLAAVLFQVGCSSADTSPTTGNVDANGNTVSSVPWNKPESWETQGQL
Ga0302326_127383172	3300031525	Palsa	MIRLISRLRLILFLLPAVLLQTGCASTSDTSPSAGNIDSSGQPVSSVPWNKPESWETTGQLGSMAQH
Ga0310686_1095750572	3300031708	Soil	GVTHAGLSDSLRNMKRVRLILLFVPLVLPLAGCSSTATTPTTSNVDASGQPVSAVPWNKPENWETTGQLGGMTQ
Ga0302319_111320812	3300031788	Bog	MIRLRTLLLLAPLALMQVACSGPSTTPPPDNVDSNGQSVSAVPWNKPEQWETAGQLGAMG
Ga0335074_107857912	3300032895	Soil	MIRLRILLFLVPLALLQVACSGSSSTPPAENVDSNGQPVSAVPWNKPESWETSGQLGNMT
Ga0334790_040682_395_583	3300033887	Soil	MTRLRLLLLLLPIALVQVGCSSADSSPSAGNVGADGQTVSSVPWNKPESWETGGQLGNAMGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences