Metagenome Family F074253

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074253
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	46 residues
Representative Sequence	VRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Number of Associated Samples	65
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.24 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.504 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (80.672 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 71.11% β-sheet: 0.00% Coil/Unstructured: 28.89%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13404	HTH_AsnC-type	8.40
PF01037	AsnC_trans_reg	6.72
PF04228	Zn_peptidase	5.04
PF03330	DPBB_1	3.36
PF09917	DUF2147	2.52
PF10011	DUF2254	2.52
PF13505	OMP_b-brl	2.52
PF04226	Transgly_assoc	1.68
PF01914	MarC	1.68
PF07885	Ion_trans_2	0.84
PF00536	SAM_1	0.84
PF00920	ILVD_EDD	0.84
PF02518	HATPase_c	0.84
PF11742	DUF3302	0.84
PF02113	Peptidase_S13	0.84
PF06305	LapA_dom	0.84
PF09361	Phasin_2	0.84
PF00211	Guanylate_cyc	0.84
PF11339	DUF3141	0.84
PF07992	Pyr_redox_2	0.84
PF13412	HTH_24	0.84
PF13561	adh_short_C2	0.84
PF02211	NHase_beta	0.84
PF01541	GIY-YIG	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2321	Predicted metalloprotease	General function prediction only [R]	5.04
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.68
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	1.68
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.68
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.84
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.50 %
Unclassified	root	N/A	39.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.49 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.68 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.92 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.84 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.72 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	2.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	2.52 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	2.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.84 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.84 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.50 %
Rhizobium favelukesii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium favelukesii	2.52 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	2.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.84 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.84 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10082270	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300004633\|Ga0066395_11016822	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300005764\|Ga0066903_107797883	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300005764\|Ga0066903_108049061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300010048\|Ga0126373_10317463	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300010048\|Ga0126373_10396650	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300010048\|Ga0126373_11449426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300010360\|Ga0126372_12828829	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_101130005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1132	Open in IMG/M
3300010376\|Ga0126381_104153357	Not Available	562	Open in IMG/M
3300010376\|Ga0126381_105152440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	500	Open in IMG/M
3300012957\|Ga0164303_11412285	Not Available	521	Open in IMG/M
3300012971\|Ga0126369_12460524	Not Available	606	Open in IMG/M
3300016270\|Ga0182036_10904571	Not Available	724	Open in IMG/M
3300016270\|Ga0182036_10970083	Not Available	699	Open in IMG/M
3300016270\|Ga0182036_11533304	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300016294\|Ga0182041_10709059	Not Available	893	Open in IMG/M
3300016294\|Ga0182041_10976704	Not Available	765	Open in IMG/M
3300016319\|Ga0182033_10076353	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300016319\|Ga0182033_10533242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1012	Open in IMG/M
3300016319\|Ga0182033_11456533	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300016319\|Ga0182033_11633712	Not Available	583	Open in IMG/M
3300016319\|Ga0182033_12016700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	526	Open in IMG/M
3300016357\|Ga0182032_10677935	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300016357\|Ga0182032_11179464	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300016357\|Ga0182032_11934758	Not Available	517	Open in IMG/M
3300016371\|Ga0182034_11823594	Not Available	536	Open in IMG/M
3300016371\|Ga0182034_11996187	Not Available	513	Open in IMG/M
3300016422\|Ga0182039_11012740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300016422\|Ga0182039_11144471	Not Available	702	Open in IMG/M
3300016422\|Ga0182039_11755361	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300016445\|Ga0182038_10079673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium favelukesii	2308	Open in IMG/M
3300016445\|Ga0182038_11043034	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300017966\|Ga0187776_10361975	Not Available	960	Open in IMG/M
3300017974\|Ga0187777_11132326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	570	Open in IMG/M
3300018058\|Ga0187766_11395145	Not Available	514	Open in IMG/M
3300018088\|Ga0187771_11089020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	678	Open in IMG/M
3300021560\|Ga0126371_10259567	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300026833\|Ga0207728_107643	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300027039\|Ga0207855_1001967	All Organisms → cellular organisms → Bacteria	3356	Open in IMG/M
3300027874\|Ga0209465_10447927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	646	Open in IMG/M
3300031545\|Ga0318541_10308393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300031546\|Ga0318538_10666245	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031546\|Ga0318538_10731330	Not Available	537	Open in IMG/M
3300031546\|Ga0318538_10779919	Not Available	519	Open in IMG/M
3300031668\|Ga0318542_10018755	Not Available	2802	Open in IMG/M
3300031668\|Ga0318542_10098339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1409	Open in IMG/M
3300031680\|Ga0318574_10173268	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300031680\|Ga0318574_10418317	Not Available	783	Open in IMG/M
3300031681\|Ga0318572_10075473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1864	Open in IMG/M
3300031681\|Ga0318572_10641124	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031713\|Ga0318496_10211407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300031719\|Ga0306917_10476795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300031724\|Ga0318500_10495325	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031744\|Ga0306918_10244908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1366	Open in IMG/M
3300031744\|Ga0306918_10264860	Not Available	1315	Open in IMG/M
3300031763\|Ga0318537_10274691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	624	Open in IMG/M
3300031777\|Ga0318543_10052046	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300031781\|Ga0318547_10767517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium favelukesii	600	Open in IMG/M
3300031793\|Ga0318548_10356410	Not Available	718	Open in IMG/M
3300031793\|Ga0318548_10377881	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031793\|Ga0318548_10654159	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031795\|Ga0318557_10357474	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031797\|Ga0318550_10577908	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031797\|Ga0318550_10653402	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031805\|Ga0318497_10117581	Not Available	1437	Open in IMG/M
3300031805\|Ga0318497_10883829	Not Available	502	Open in IMG/M
3300031819\|Ga0318568_10021149	All Organisms → cellular organisms → Bacteria	3526	Open in IMG/M
3300031833\|Ga0310917_10141688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1580	Open in IMG/M
3300031833\|Ga0310917_10434933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	892	Open in IMG/M
3300031833\|Ga0310917_11160678	Not Available	514	Open in IMG/M
3300031835\|Ga0318517_10277883	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031845\|Ga0318511_10122117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1122	Open in IMG/M
3300031879\|Ga0306919_10074217	Not Available	2326	Open in IMG/M
3300031879\|Ga0306919_10311333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1197	Open in IMG/M
3300031890\|Ga0306925_10071090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3662	Open in IMG/M
3300031890\|Ga0306925_10413711	Not Available	1444	Open in IMG/M
3300031890\|Ga0306925_11225778	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031890\|Ga0306925_11667892	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031890\|Ga0306925_11949173	Not Available	556	Open in IMG/M
3300031896\|Ga0318551_10578931	Not Available	647	Open in IMG/M
3300031896\|Ga0318551_10905650	Not Available	515	Open in IMG/M
3300031910\|Ga0306923_10649296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1180	Open in IMG/M
3300031910\|Ga0306923_11872882	Not Available	613	Open in IMG/M
3300031912\|Ga0306921_10952598	Not Available	971	Open in IMG/M
3300031912\|Ga0306921_11178366	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300031912\|Ga0306921_11477390	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031912\|Ga0306921_12175589	Not Available	585	Open in IMG/M
3300031912\|Ga0306921_12252087	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031941\|Ga0310912_10627344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium favelukesii	835	Open in IMG/M
3300031942\|Ga0310916_11658386	Not Available	518	Open in IMG/M
3300031946\|Ga0310910_10035802	All Organisms → cellular organisms → Bacteria → Proteobacteria	3413	Open in IMG/M
3300031946\|Ga0310910_10196891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1562	Open in IMG/M
3300031946\|Ga0310910_10484855	Not Available	981	Open in IMG/M
3300031946\|Ga0310910_11357966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	548	Open in IMG/M
3300031946\|Ga0310910_11512610	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031954\|Ga0306926_10293432	Not Available	2013	Open in IMG/M
3300032001\|Ga0306922_10169450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2339	Open in IMG/M
3300032001\|Ga0306922_10210416	Not Available	2087	Open in IMG/M
3300032001\|Ga0306922_10685185	Not Available	1080	Open in IMG/M
3300032001\|Ga0306922_10887473	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300032010\|Ga0318569_10258121	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032039\|Ga0318559_10527769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	551	Open in IMG/M
3300032041\|Ga0318549_10395399	Not Available	623	Open in IMG/M
3300032052\|Ga0318506_10506332	Not Available	535	Open in IMG/M
3300032054\|Ga0318570_10269053	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300032055\|Ga0318575_10717710	Not Available	505	Open in IMG/M
3300032066\|Ga0318514_10409105	Not Available	720	Open in IMG/M
3300032094\|Ga0318540_10375367	Not Available	687	Open in IMG/M
3300032261\|Ga0306920_100057597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5662	Open in IMG/M
3300032261\|Ga0306920_100539445	Not Available	1729	Open in IMG/M
3300032261\|Ga0306920_101592583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	929	Open in IMG/M
3300032261\|Ga0306920_102127119	Not Available	782	Open in IMG/M
3300032261\|Ga0306920_103266079	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300032805\|Ga0335078_10154126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3247	Open in IMG/M
3300032955\|Ga0335076_11690013	Not Available	522	Open in IMG/M
3300033289\|Ga0310914_10168689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1942	Open in IMG/M
3300033289\|Ga0310914_11375940	Not Available	608	Open in IMG/M
3300033289\|Ga0310914_11644385	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.04%
Loam	Environmental → Terrestrial → Soil → Loam	5.04%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100822701	3300000597	Forest Soil	DWLAMLAAHIVARWFSPLLLLLGVVLGVIQVALGLQLMLGGIEGLIAQGVFTAPGN*
Ga0066395_110168221	3300004633	Tropical Forest Soil	LLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFTAPGK*
Ga0066903_1077978832	3300005764	Tropical Forest Soil	LAMLVAHTIVRWFSPLLLLLGVILGVNQVALGLQLMLGGMQGLIAQGVFTAPGK*
Ga0066903_1080490611	3300005764	Tropical Forest Soil	RWFNPLLLLLGVILGVSQVALGLHLMLVGMEDLIAQGVFTAPGK*
Ga0126373_103174634	3300010048	Tropical Forest Soil	MLVAHLVVRWFNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK*
Ga0126373_103966504	3300010048	Tropical Forest Soil	LDWLAMLVAHIVVRWFNPLLLLLGVILGVSQVALGLHLMLVGMEDLIAQGVFTAPGK*
Ga0126373_114494262	3300010048	Tropical Forest Soil	LDWLAMLVAHIVVRWFNPLLLLLGVILGVSQVALGLHLMLGGMADLIVQGVFTAPGK*
Ga0126372_128288291	3300010360	Tropical Forest Soil	AHIVVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK*
Ga0126381_1011300053	3300010376	Tropical Forest Soil	LLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFAAPGN*
Ga0126381_1041533571	3300010376	Tropical Forest Soil	MSCIVVRWFSPPLLLLGVILGVNQVALGLQLMLGGMSGLIAQGVFT
Ga0126381_1051524401	3300010376	Tropical Forest Soil	MLAAHVIVRWLGPLLLLLGVVLGVTQVALGLQLMIGGLSGLIAQGAFTASGN*
Ga0164303_114122851	3300012957	Soil	HIVRWFGPLLLLLGVVLGVNQVALGLQLMLGGISGLIEQGAFAAPLR*
Ga0126369_124605242	3300012971	Tropical Forest Soil	DWLAMLVAHTIVRWFSPLLLLLGVILGVNQVALGLQLMLGGMQGLIAQGVFTAPGN*
Ga0182036_109045711	3300016270	Soil	LLLLLGVILGVSQVALGLQLTLGGMEGLIAQGVFTAPGK
Ga0182036_109700831	3300016270	Soil	LGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK
Ga0182036_115333041	3300016270	Soil	WLAMLVAHTIVRWFNPLLLLLGVILGVSQVALGLQLMLGGVEGLIAQGVFTAPGK
Ga0182041_107090593	3300016294	Soil	AMLVAHTIVRWFNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0182041_109767042	3300016294	Soil	VAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0182033_100763534	3300016319	Soil	DWLAMLVAHLVVRWFNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK
Ga0182033_105332422	3300016319	Soil	RWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0182033_114565332	3300016319	Soil	AMLVAHIVVRWFSPLLLLLGVILGVNQVALGLQLMLGGMEGLVAQGVFTTPGK
Ga0182033_116337121	3300016319	Soil	LLLLLGVILGFNQVALVLQLMLGGMEGLIAQGVFTAPRN
Ga0182033_120167001	3300016319	Soil	MLVAHIVVRWFSPLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTASGN
Ga0182032_106779351	3300016357	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGIEGLIAQGVSIIAFDL
Ga0182032_111794641	3300016357	Soil	LAMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPRN
Ga0182032_119347581	3300016357	Soil	HTIVRWFNPLLLLLGVILGVSQVALGLQPMLGGMEGLIAQGVFTVPGK
Ga0182034_118235942	3300016371	Soil	AMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVLTAPGK
Ga0182034_119961872	3300016371	Soil	MLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0182039_110127403	3300016422	Soil	AMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0182039_111444712	3300016422	Soil	LLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK
Ga0182039_117553611	3300016422	Soil	LAMLVAHTIVRWFNPLLLLLGVILGVSQVALGLQLMLGGVEGLIAQGVFTAPGK
Ga0182038_100796731	3300016445	Soil	IVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0182038_110430341	3300016445	Soil	LAMLVAHTIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0187776_103619751	3300017966	Tropical Peatland	FGPLLLLLGVVLGVTQVALGVQLRLGGMSGLIAQGVFTAPGN
Ga0187777_111323261	3300017974	Tropical Peatland	VRWFSPLLLLLGVVLGVTQVALGLQLMLGGMSGLIGQGVFTNSGN
Ga0187766_113951452	3300018058	Tropical Peatland	LAAHIIVPWFGPLLLLFGVLLGVDQVALGLQLMIGSSSGLIAQGAFMTPSN
Ga0187771_110890201	3300018088	Tropical Peatland	LLLLLGVVLGVNQVALGLQLMIGGISGLIAQGAFMTPSN
Ga0126371_102595673	3300021560	Tropical Forest Soil	WFSPLLLLLGVVLGVTQVALGLQLMLGGLSGLIAQGVFTAPAN
Ga0207728_1076431	3300026833	Tropical Forest Soil	LLLLLGVVLGVTQVALGLQLMLGGLSGLIAQGVFTAPGK
Ga0207855_10019671	3300027039	Tropical Forest Soil	DWLAMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0209465_104479271	3300027874	Tropical Forest Soil	VRWFSPLLLLLGVILGVNQVALGLQLMLGGMEGLVAQGVFTAPGK
Ga0318541_103083932	3300031545	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGIEGLIAQG
Ga0318538_106662451	3300031546	Soil	AHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0318538_107313302	3300031546	Soil	LLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318538_107799191	3300031546	Soil	LLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0318542_100187551	3300031668	Soil	LLGVILGVSQVALGLQLTLGGVEGLIAQGVFTAAGK
Ga0318542_100983392	3300031668	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGIEGLIAQGVSIIAFDLAPRHR
Ga0318574_101732683	3300031680	Soil	HLIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318574_104183173	3300031680	Soil	LLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0318572_100754731	3300031681	Soil	IIVRWFNPLLLLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0318572_106411241	3300031681	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGME
Ga0318496_102114073	3300031713	Soil	LAMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGLEGLIAQGVFTAPGK
Ga0306917_104767952	3300031719	Soil	MLFGVILGVTQVALGLQLILAGISGLIAQGDSPGN
Ga0318500_104953252	3300031724	Soil	FNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0306918_102449083	3300031744	Soil	FNPLLLLLGVILGVSQVALGLQLMLGGTEGLIAQGVFTAPGK
Ga0306918_102648601	3300031744	Soil	LGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPRN
Ga0318537_102746911	3300031763	Soil	LAAHVIVRWLGPLLLLLGVVLGVTQVALGLQLMIGGISGLIAQGAFANSGN
Ga0318543_100520463	3300031777	Soil	LLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318547_107675171	3300031781	Soil	DWLAMLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0318548_103564101	3300031793	Soil	PLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0318548_103778813	3300031793	Soil	MLVAQTIVRWFNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318548_106541591	3300031793	Soil	VVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPRN
Ga0318557_103574741	3300031795	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGIEGLIA
Ga0318550_105779082	3300031797	Soil	PLLLLVGVVLGVTQVALGLQLMLGGMSGLIAQGVFTASGN
Ga0318550_106534021	3300031797	Soil	LLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318497_101175811	3300031805	Soil	LLLGVILGVSQVALGLHLMLVGMGDLIAQGVFTAPGK
Ga0318497_108838292	3300031805	Soil	AHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318568_100211495	3300031819	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0310917_101416883	3300031833	Soil	DWLAMLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0310917_104349331	3300031833	Soil	MLVAHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0310917_111606781	3300031833	Soil	VAHTIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTVPGK
Ga0318517_102778833	3300031835	Soil	LLRLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318511_101221172	3300031845	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLI
Ga0306919_100742171	3300031879	Soil	LLGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK
Ga0306919_103113332	3300031879	Soil	AHIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0306925_100710901	3300031890	Soil	LLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTASGN
Ga0306925_104137113	3300031890	Soil	LMLFGVILGVTQVALGLQLILAGISGLIAQGDFTAPGN
Ga0306925_112257782	3300031890	Soil	LLLDWLAMLAPHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0306925_116678922	3300031890	Soil	RWFNPLLLLLGVILGVSQVALGLHLIMLVGMEDLIAQGVFTAPGK
Ga0306925_119491731	3300031890	Soil	MLVAHTIVRWFNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318551_105789311	3300031896	Soil	IVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318551_109056501	3300031896	Soil	IVVRWFSPLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306923_106492961	3300031910	Soil	SPLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306923_118728821	3300031910	Soil	AHLIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0306921_109525981	3300031912	Soil	FNPLLLLLGVILGVNQVALGLQLMLGGMEGLIAQGVFAAPGK
Ga0306921_111783662	3300031912	Soil	LLLLVGVVLGVTQVALGLQLMLGGMSGLIAQGVFTASGN
Ga0306921_114773901	3300031912	Soil	MLFGVILGVTQVALGLQLILAGISGLIAQGDFTAPGN
Ga0306921_121755892	3300031912	Soil	PLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTASGN
Ga0306921_122520872	3300031912	Soil	PLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0310912_106273443	3300031941	Soil	VRWFSPLLLLGVVLGVIQEVLGLQLMLGGIEGLIAQGVFTAPGN
Ga0310916_116583861	3300031942	Soil	IVLRWFSPLLLLLGVILGVIQVALGLQLMLGGMEGLITQGVFTAPGN
Ga0310910_100358021	3300031946	Soil	HIVVRWFSPLLLLLGVVLGVNQVALGIQLMLGGISGLIARGVFTVPGN
Ga0310910_101968913	3300031946	Soil	HIIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGN
Ga0310910_104848552	3300031946	Soil	MLVAHIVVRWFNPLLLLLGVILGVSQVALGLQLMLGGTEGLIAQGVFTAPGK
Ga0310910_113579661	3300031946	Soil	LGVILGVNQVALGIQLMLGGISGLTAQGVFTAPGN
Ga0310910_115126101	3300031946	Soil	VRWLGPLLLLLGVVLGVNQVALGLQLMIGGISGLIAQGAFMIPSN
Ga0306926_102934325	3300031954	Soil	FSPLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306922_101694505	3300032001	Soil	MLVAHTIVRWFNPLLLLLGVILGVSQVALGLQLMLGGVEGLIAQGVFTAPGK
Ga0306922_102104161	3300032001	Soil	AHIVGRWFSPLLLLLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306922_106851851	3300032001	Soil	WLGPLLMLFGVILGVTQVALGLQLILAGLSGLIAQGDFAAPGN
Ga0306922_108874734	3300032001	Soil	AMLAAHVIVRWLGPLLLLLGVVLGVNQVALGLQLMIGGISGLIAQGAFMIPSN
Ga0318569_102581212	3300032010	Soil	FILFLDWIAMLVAHIVVRWFNPLLLLLGVILGVSQVALGLQLTLGGVEGLIAQGVFTAAG
Ga0318559_105277692	3300032039	Soil	LLLLGVVLGVTQVALGLQLMIGGISGLIAQGAFANSGN
Ga0318549_103953991	3300032041	Soil	LVAHLIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318506_105063322	3300032052	Soil	VRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318570_102690531	3300032054	Soil	MLAAHIVVRWFSPLLLLLGVVLGVIQVALGLQLMLGGMEGLIAQG
Ga0318575_107177102	3300032055	Soil	GPLLLLLGVVLGVTQVALGLQLMIGGISGLIAQGAFANSGN
Ga0318514_104091051	3300032066	Soil	GFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0318540_103753672	3300032094	Soil	LGVILGVSQVALGLQLMLGGMEGLIAQGVFTASGK
Ga0306920_10005759710	3300032261	Soil	VRWLGPLLMLLGVILGVTQVALGLQLILAGISGLIAQGDFTAPGN
Ga0306920_1005394452	3300032261	Soil	IGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306920_1015925831	3300032261	Soil	LLGVVLGVTQVALGLQLMLGGMSGLIAQGVFTAPGN
Ga0306920_1021271193	3300032261	Soil	MLVAHLIVRWFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0306920_1032660791	3300032261	Soil	DWLAMLGAHIVVRWFSPLLLLIGVVLGVNQVALGIQLMLGGISGLIAQGVFTARGN
Ga0335078_101541265	3300032805	Soil	LAMLGAHVIVRWLGPLLMLFGVVLGVTQVALGLQFALGGLSGLIEQGAFAVSR
Ga0335076_116900131	3300032955	Soil	IVRWLGPLLLLLGVVLGVNQVALGLQLMIGGISGLIAQGAFMTPSN
Ga0310914_101686894	3300033289	Soil	WFNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0310914_113759402	3300033289	Soil	FNPLLLLLGVILGVSQVALGLQLMLGGMEGLIAQGVFTAPGK
Ga0310914_116443852	3300033289	Soil	LLLGVILGVNQVALGLQLMLGGMEGLIAQGVFTAPGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074253

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences