NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074172

Metagenome / Metatranscriptome Family F074172

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074172
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 72 residues
Representative Sequence LEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRVLTDKAFAA
Number of Associated Samples 107
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 90.83 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(21.667 % of family members)
Environment Ontology (ENVO) Unclassified
(28.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.35%    β-sheet: 13.27%    Coil/Unstructured: 69.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.87.2.1: CO dehydrogenase flavoprotein C-terminal domain-liked1t3qc11t3q0.80212
d.87.2.1: CO dehydrogenase flavoprotein C-terminal domain-liked1n62c11n620.74158
d.87.2.1: CO dehydrogenase flavoprotein C-terminal domain-liked1rm6b11rm60.72914
d.87.2.0: automated matchesd2w3sa42w3s0.72606
d.87.2.0: automated matchesd3nvvb23nvv0.66744


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF01799Fer2_2 70.83
PF02738MoCoBD_1 9.17
PF01315Ald_Xan_dh_C 8.33
PF00111Fer2 5.83
PF05378Hydant_A_N 0.83
PF02538Hydantoinase_B 0.83
PF01048PNP_UDP_1 0.83
PF01425Amidase 0.83
PF00941FAD_binding_5 0.83
PF01042Ribonuc_L-PSP 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG0145N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunitAmino acid transport and metabolism [E] 1.67
COG0146N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunitAmino acid transport and metabolism [E] 1.67
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.83
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.83
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.83
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.83
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090004|P1_DRAFT_NODE_15560_len_731_cov_13_326949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300000878|AL9A1W_1111619All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300001334|A2165W6_1494098All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300001409|JGI20185J14861_1000658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4744Open in IMG/M
3300001526|A105W1_1124690All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300001536|A1565W1_10827731All Organisms → cellular organisms → Bacteria → Terrabacteria group621Open in IMG/M
3300001538|A10PFW1_10015494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales879Open in IMG/M
3300001661|JGI12053J15887_10217992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales961Open in IMG/M
3300001664|P5cmW16_1053512All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300002562|JGI25382J37095_10225684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300002914|JGI25617J43924_10190932All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300004479|Ga0062595_101074475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia700Open in IMG/M
3300004479|Ga0062595_101306851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia653Open in IMG/M
3300005177|Ga0066690_10981669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia533Open in IMG/M
3300005363|Ga0008090_14514362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1136Open in IMG/M
3300005435|Ga0070714_101504942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia657Open in IMG/M
3300005436|Ga0070713_101617152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia629Open in IMG/M
3300005446|Ga0066686_10036960All Organisms → cellular organisms → Bacteria2901Open in IMG/M
3300005450|Ga0066682_10128620All Organisms → cellular organisms → Bacteria1604Open in IMG/M
3300005454|Ga0066687_10413130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia783Open in IMG/M
3300005468|Ga0070707_101028035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia789Open in IMG/M
3300005471|Ga0070698_101942662All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005518|Ga0070699_100125018All Organisms → cellular organisms → Bacteria2264Open in IMG/M
3300005518|Ga0070699_101073921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia738Open in IMG/M
3300005518|Ga0070699_101283380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia672Open in IMG/M
3300005536|Ga0070697_100657760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia923Open in IMG/M
3300005536|Ga0070697_100849879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria808Open in IMG/M
3300005540|Ga0066697_10742999All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005542|Ga0070732_10421737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia806Open in IMG/M
3300005545|Ga0070695_100745160All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300005546|Ga0070696_100488355All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300005555|Ga0066692_10776658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300005558|Ga0066698_10127523All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300005559|Ga0066700_10569786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300005568|Ga0066703_10130087All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300005574|Ga0066694_10011616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3754Open in IMG/M
3300005614|Ga0068856_102173428All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300005938|Ga0066795_10035725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1455Open in IMG/M
3300005980|Ga0066798_10201168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium541Open in IMG/M
3300006032|Ga0066696_10111713All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300006050|Ga0075028_100650461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia630Open in IMG/M
3300006794|Ga0066658_10412042All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300006800|Ga0066660_11551120All Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
3300006854|Ga0075425_101846514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura678Open in IMG/M
3300006854|Ga0075425_103175791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia500Open in IMG/M
3300006903|Ga0075426_10932332All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300006903|Ga0075426_11569963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia500Open in IMG/M
3300007076|Ga0075435_100345346All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300007258|Ga0099793_10661399All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300009088|Ga0099830_11068323All Organisms → cellular organisms → Bacteria → Terrabacteria group669Open in IMG/M
3300009088|Ga0099830_11546164All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300009090|Ga0099827_11789030All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009137|Ga0066709_101302823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1065Open in IMG/M
3300009137|Ga0066709_104192815All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300010047|Ga0126382_10705874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria847Open in IMG/M
3300010321|Ga0134067_10218731All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300010358|Ga0126370_12050175All Organisms → cellular organisms → Bacteria → Terrabacteria group560Open in IMG/M
3300010361|Ga0126378_11508439All Organisms → cellular organisms → Bacteria → Terrabacteria group762Open in IMG/M
3300010400|Ga0134122_12668637All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300011270|Ga0137391_11072928All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300011271|Ga0137393_10517598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1023Open in IMG/M
3300012096|Ga0137389_10434874All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300012189|Ga0137388_10763144All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300012208|Ga0137376_10217628All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300012208|Ga0137376_10649766All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300012209|Ga0137379_10253699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1671Open in IMG/M
3300012209|Ga0137379_10319544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1463Open in IMG/M
3300012211|Ga0137377_10922729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria805Open in IMG/M
3300012359|Ga0137385_10355778All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300012360|Ga0137375_10030023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6178Open in IMG/M
3300012363|Ga0137390_10535854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1142Open in IMG/M
3300012363|Ga0137390_10567224All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300012923|Ga0137359_10758284All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300012927|Ga0137416_10184784All Organisms → cellular organisms → Bacteria1661Open in IMG/M
3300012927|Ga0137416_10572031All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300012944|Ga0137410_10399608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1107Open in IMG/M
3300012948|Ga0126375_11196437All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300013763|Ga0120179_1003768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4484Open in IMG/M
3300013768|Ga0120155_1002449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7424Open in IMG/M
3300013770|Ga0120123_1124206All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300014150|Ga0134081_10371279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium530Open in IMG/M
3300014827|Ga0120171_1071225All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300018431|Ga0066655_10829787All Organisms → cellular organisms → Bacteria → Terrabacteria group629Open in IMG/M
3300020581|Ga0210399_10183454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1738Open in IMG/M
3300021420|Ga0210394_10138956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2107Open in IMG/M
3300021432|Ga0210384_10687656All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300021479|Ga0210410_11302038All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300024249|Ga0247676_1042357All Organisms → cellular organisms → Bacteria → Terrabacteria group738Open in IMG/M
3300025910|Ga0207684_11127441All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300025929|Ga0207664_11676532All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026317|Ga0209154_1016290All Organisms → cellular organisms → Bacteria → Terrabacteria group3527Open in IMG/M
3300026319|Ga0209647_1245125All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300026322|Ga0209687_1282793All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026324|Ga0209470_1053610All Organisms → cellular organisms → Bacteria1934Open in IMG/M
3300026326|Ga0209801_1331511All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300026327|Ga0209266_1044574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2230Open in IMG/M
3300026330|Ga0209473_1317053All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300026332|Ga0209803_1207643All Organisms → cellular organisms → Bacteria → Terrabacteria group710Open in IMG/M
3300026342|Ga0209057_1085618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1319Open in IMG/M
3300026342|Ga0209057_1247458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300026529|Ga0209806_1340854All Organisms → cellular organisms → Bacteria → Terrabacteria group503Open in IMG/M
3300026536|Ga0209058_1019365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4509Open in IMG/M
3300026542|Ga0209805_1156210All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300026550|Ga0209474_10118639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1757Open in IMG/M
3300027388|Ga0208995_1085912All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300027480|Ga0208993_1059582All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300027645|Ga0209117_1171518All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300027655|Ga0209388_1134568All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300027667|Ga0209009_1146346All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300027674|Ga0209118_1198530All Organisms → cellular organisms → Bacteria → Terrabacteria group541Open in IMG/M
3300027857|Ga0209166_10634798All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300027875|Ga0209283_10738176All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300027903|Ga0209488_10960723All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300031670|Ga0307374_10590815All Organisms → cellular organisms → Bacteria → Terrabacteria group566Open in IMG/M
3300031753|Ga0307477_10484511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria842Open in IMG/M
3300031820|Ga0307473_10185295All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300031896|Ga0318551_10290817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium918Open in IMG/M
3300032174|Ga0307470_11509526All Organisms → cellular organisms → Bacteria → Terrabacteria group559Open in IMG/M
3300032205|Ga0307472_100311147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1272Open in IMG/M
3300032261|Ga0306920_101893179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria839Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.67%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.17%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost8.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.67%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.67%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.83%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090004Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
3300000878Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001334Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001409Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012EnvironmentalOpen in IMG/M
3300001526Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-5cm-1A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300005980Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
P1_DRAFT_009044802088090004SoilSRRHGDFALAGVVRAGQRLALFGVAPTPVLADPVDPMRGLRPSGDLEATTEFRLHLVRVLIEKAMAA
AL9A1W_111161913300000878PermafrostPHGLREESRRHGDYAMAGAVRAGERLTLFGVAPTPVVADPKNPTGGLQPSGDIEASPEFRKHLVEVLTQDLFAA*
A2165W6_149409833300001334PermafrostIAEEVRRHGDFALAGAVRAGDRLVLFGVATRPVLADPADPTRGLQPSADPECSPAFRLHLVEALVERVMGA*
JGI20185J14861_100065813300001409Arctic Peat SoilDFALAGAVRALGRLALFGVAPTPVLADAANPGRGLQPSGDLEATPEFRLHLVRVLTERVFAA*
A105W1_112469013300001526PermafrostRHGDYAMAGAVRAGERLTLFGVAPTPVVADPKNPTGGLQPSGDIEASPEFRKHLVEVLTQDLFAA*
A1565W1_1082773123300001536PermafrostAEEVRRQGDFAMAGAVRAGDRLALFGVATRPLLADAADPTRGLQPSDDPECSPEFRLHLVNQLVDRVMKG*
A10PFW1_1001549433300001538PermafrostAWFPTSERRVAIAEEVRRHGDFAMAGAVRAGDRLVLFGVATRPVLADPADPTRGLEPSNDPECSPAFRLHLVKAMVERVMSG*
JGI12053J15887_1021799233300001661Forest SoilVEESRRHGDFAMAGVARAGRRLALFGVAPTPVLADAEDPTRDLHPSGDLESSPEFKLHLVRVLVGRAA*
P5cmW16_105351213300001664PermafrostLREESRRHGDYAMAGAVRAGERLTLFGVAPTPVVADPKNPTGGLQPSGDIEASPEFRKHLVEVLTQDLFAA*
JGI25382J37095_1022568423300002562Grasslands SoilEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTSGLNPSGDLEATPEFRLHLVQVVTDRLFAA*
JGI25617J43924_1019093213300002914Grasslands SoilAWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVVTERLFAA*
Ga0062595_10107447513300004479SoilELLVEAWFPASAEPFAIVEETRRHGDFALAGVVRAGERLALFGVAPTPVLADPRDPAHGLQPSGDLEASSGFRLHLVQVLTGRAFAT*
Ga0062595_10130685123300004479SoilPFAVIEESRRHGDFALAGVVRAADRLALFGVAPTPVLADPREPAKGLRPSGDLEASAEFRLHLVRVLAGKAFAA*
Ga0066690_1098166923300005177SoilVEAWFPSSSKPYSVIEESRRHGDFALAGVVRASDRLALFGVAPTPVLADPRDPARGLEPSRDLEASPDFRLHLIRVLTEQAFAA*
Ga0008090_1451436233300005363Tropical Rainforest SoilDFALAGVVRAGERLALFGVAPTPVLADPADPSRGLEPSADLEATREFRLHLVRVLTDKAFAA*
Ga0070714_10150494213300005435Agricultural SoilPFAVIEESRRHGDFALAGVVRAADRLALFGVAPTPVLADPRDPAGGLQPSGDLEASAEFRLHLVRVLAGKAFAA*
Ga0070713_10161715213300005436Corn, Switchgrass And Miscanthus RhizospherePVAIAEEARRHGDFAMAGAVRSGDRLVLFGVATRPVLADPADPTRGLEPSADPECSPAFRLHLVEAMVERVMSA*
Ga0066686_1003696013300005446SoilLAPDEVLVEAWFPSSSKPYSVIEESRRHGDFALAGVVRASDRLALFGVAPTPVLADPRDPARGLEPSRDLEASPDFRLHLIRVLTEQAFAA*
Ga0066682_1012862013300005450SoilLEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRVLTDKAFAA*
Ga0066687_1041313023300005454SoilHAILEESRRHGDFALAGVVRAGERLTLFGVAPTPVMADRADPTRGLQPSGDLEATPEFRLHLVRVLADKAFAA*
Ga0070707_10102803523300005468Corn, Switchgrass And Miscanthus RhizosphereWFPASTGKYGIAEESRRHGDFALAGGVRYGDRLALFGVAPKPVLADPKDPARGLQPSGDLEATPEFRLHLVQVVTDRLFAA*
Ga0070698_10194266213300005471Corn, Switchgrass And Miscanthus RhizosphereEESRRHGDFALAGAVRAGDRLALFGVAPTPVLADPKNPTRGLQPSADLEATPEFRLHLVRVLTDRLFAA*
Ga0070699_10012501833300005518Corn, Switchgrass And Miscanthus RhizosphereAIVEESRRHGDFALAGAVRASDSLALFGVAPTPVLADPKDPTKGLLPSGDLEATREFRIHLVKVLTEKAFAA*
Ga0070699_10107392123300005518Corn, Switchgrass And Miscanthus RhizosphereFALAGGVRYGDRLALFGVAPKPVLADPKDPARGLRPSGDLEATPEFRLHLVQVVTDRLFN
Ga0070699_10128338023300005518Corn, Switchgrass And Miscanthus RhizosphereEESRRHGDFALAGVVRAGDRLALFGVAPSPVLADAKDPAQGLQPSGDLEATPEFRLHLVRVLSEKAFAA*
Ga0070697_10065776013300005536Corn, Switchgrass And Miscanthus RhizosphereRRHGDFALAGAVRAASRLALFGVAPTAVLADPKDPTKGLRPSGDLEATSEFRLHLIQVLTERAFAA*
Ga0070697_10084987913300005536Corn, Switchgrass And Miscanthus RhizosphereDELLVEAWFPASTGKYGIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKDPARGLQPSGDLEATPEFRLHLVQVVTDRLFN*
Ga0066697_1074299923300005540SoilRRHGDFALAGAVRHEDRLALFGVAPTPVLADPRDPTRGLEPSPDLEASREFRLHLVRVLTEKAFAA*
Ga0070732_1042173713300005542Surface SoilILEESRRHGDFALAGIVRAGENLALFGVAPTPVLADPRDPTRGLQPSGDLEASPEFRLHLVRALTEKAFAA*
Ga0070695_10074516013300005545Corn, Switchgrass And Miscanthus RhizosphereIVEETRRHGDFALAGVVRAGERLALFGVAPTPVLADPRDPAHGLQPSGDLEASSGFRLHLVQVLTGRAFAT*
Ga0070696_10048835533300005546Corn, Switchgrass And Miscanthus RhizosphereRHGDFALAGAVRASDSLALFGVAPTPVLADPKDPTKGLLPSGDLEATREFRIHLVKVLTEKAFAA*
Ga0066692_1077665823300005555SoilSRRHGDFALAGVVRAGDTLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA*
Ga0066698_1012752313300005558SoilESRRHGDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA*
Ga0066700_1056978613300005559SoilDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA*
Ga0066703_1013008713300005568SoilLEESRRHGDFALAGVVRAGPKLALFGVAPTPVLADPRDPARELQPSGDLEATPEFRMHLVRVLTERAFAA*
Ga0066694_1001161653300005574SoilFAILEESRRHGDFALAGVVRAGDTLALFGVAPTPVLADAKDPSRGLQPSSDLEATPEFRLHLVRALTLKAFAA*
Ga0068856_10217342823300005614Corn RhizosphereDELLVEAWFPASPRPSTILEESRRHGDFALAGVVRAGDRLALFGVAPTPVMADPRDPARGLDPSGDLEATGEFRRHLVRALTERAMAA*
Ga0066795_1003572533300005938SoilIIEESRRHGDFALAGVVRAADRLALFGVAPTPVLADPRDPARGLLPSGDLEASPEFRLHLVRALTEKAFAA*
Ga0066798_1020116813300005980SoilPNELMVEAWFPTISEPFAIIEESRRHGDFALAGVVRAADRLALFGVAPTPVLADPRDPARGLLPSGDLEASPEFRLHLVRALTEKAFAA*
Ga0066696_1011171313300006032SoilESRRHGDFALAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPDFRLHLVRVLTDRAFAA*
Ga0075028_10065046123300006050WatershedsAPWAIVEESRRHGDFAMAGAVRAGEKLALFGVAATPVLADPSDPARGLAPSGDLEATPAFKLHLVQVLTRRLFAA*
Ga0066658_1041204233300006794SoilRRHGDFALAGVVRASDRLALFGVAPTPVLADPRDPARGLEPSRDLEASPDFRLHLIRVLTEQAFAA*
Ga0066660_1155112023300006800SoilGPVAIAEEVRRHGDFALAGAARAGDRVALFGVATRPVLADPDDPTRGLNPSSDPECSPDFRLHLVREMVARVMAS*
Ga0075425_10184651423300006854Populus RhizosphereILEESRRHGDFALAGVVRAGEKLALFGVAGTPVLADPRDPTRGLEPSADLEATREFRLHLVRALTEQAMAA*
Ga0075425_10317579123300006854Populus RhizosphereRRHGDFALAGVVRAGDSMALFGVAPTPVRADPQNPTAGLQPSADLEATAEFRLHLVRVLTDRAFAA*
Ga0075426_1093233213300006903Populus RhizosphereFPKSPAPFAIIEESRRHGDFALAGVVRAGDRLVLFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVQVLTEKAFAA*
Ga0075426_1156996323300006903Populus RhizosphereGRFAVLEESRRHGDFALAGVVRAGEKLALFGVAPTPVLADPGDPTRGLRPSGDLEATPEFRLHLVRALTEKAFAA*
Ga0075435_10034534613300007076Populus RhizosphereSRRHGDFALAGVVRAADRLALFGVAPTPVLADPGDPARGLEPSGDLEATPDFRRHLVRVLAEKAFAA*
Ga0099793_1066139913300007258Vadose Zone SoilAWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVLTDRLFAA*
Ga0099830_1106832313300009088Vadose Zone SoilLAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRALTDRAFAA*
Ga0099830_1154616413300009088Vadose Zone SoilSPKQSAIAEESRRHGDFALAGAVRAGDRLALFGVAPTPVLADPKNPTQGLQPSGDLEATPEFRLHLVQVLTDRLFAA*
Ga0099827_1178903023300009090Vadose Zone SoilVEAWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVLTDRLFAA*
Ga0066709_10130282313300009137Grasslands SoilAILEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRVLTDKAFAA*
Ga0066709_10419281523300009137Grasslands SoilWFPSSSKPYSVIEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADRLDPTRGLEPSGDLEASADFRLHLIRALTAQAFAA*
Ga0126382_1070587433300010047Tropical Forest SoilAMAGVARYRDRVALFGVAGTPVVADPDDPTRGLQPSGDLEASPEFKLHLVRVLVARAYGRAG*
Ga0134067_1021873113300010321Grasslands SoilESRRHGDFALAGVVRAGDALALFGVASRPVLADRRDPTHGLQPSGDLEATPDFRMHLVRVLTEKAFAA*
Ga0126370_1205017523300010358Tropical Forest SoilRRHGDFALAGVVRSEDSLALFGVAPTPVLADPSDPTRGLQPSGDLEASSEFRIHLVEVLVDRAFAA*
Ga0126378_1150843923300010361Tropical Forest SoilAGVVRSGDRLALFGVAPTPVLADPTDPARGLQPSGDLEASPEFRLHLVRVLVARAYGRSG
Ga0134122_1266863723300010400Terrestrial SoilFALAGAVRAGDRLALFGVAPTPVLADRSQPTRGLQPSGDLEATAEFRLHLVGALTEKVFAS*
Ga0137391_1107292823300011270Vadose Zone SoilRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVLTDRLFAA*
Ga0137393_1051759823300011271Vadose Zone SoilLAGAVRAGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVLTDRIFAA*
Ga0137389_1043487433300012096Vadose Zone SoilDELLVEAWFRASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLQPSGDLEATPEFRLHLVQVLTDRLFAA*
Ga0137388_1076314413300012189Vadose Zone SoilDLALAGVVRAGDRLALFGGAEIPELANAIERGRGLLHSGEVEATAVFRLHLVRVLTDKAFAA*
Ga0137376_1021762833300012208Vadose Zone SoilVEAWFPALREPFAILEESRRHGDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA*
Ga0137376_1064976613300012208Vadose Zone SoilSKPYAVIEETRRHGDFALAGVVRAGDQLALFGVAPTPVLADRHDPTRGLEPSGDLEASPDFRLHLIRALTAQAFAA*
Ga0137379_1025369913300012209Vadose Zone SoilPKPFAILEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRVLTDRAFAA*
Ga0137379_1031954433300012209Vadose Zone SoilPKPFAILEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADSKDPSRGLQPSGDLEATPEFRLHLVRVLTERAFAA*
Ga0137377_1092272933300012211Vadose Zone SoilDFALAGVVRAGDRLALFGVAPTPVLADRLDPTRGLEPSGDLEASADFRLHLVRALAAQAFAA*
Ga0137385_1035577813300012359Vadose Zone SoilHGDFALAGVVRAGERLALYGVAPTPVLADPQDPARGLEPSGDLEASSDFRIHLVRVLAEKALA*
Ga0137375_1003002313300012360Vadose Zone SoilFALAGAVRAGDRLALFGVAPTPVLAERRDPTQGLEPSADLEATPDFRLHLVRVLTERAFAA*
Ga0137390_1053585433300012363Vadose Zone SoilEESRRHGDFALAGVVRATDRMSLFGVAPTPVLADPRDPAKGLLPSGDLEATPEFRLHLIRVLTAKAFAA*
Ga0137390_1056722413300012363Vadose Zone SoilEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTKGLQPSGDLEATAEFRLHLVQVVTDRLFAA*
Ga0137359_1075828413300012923Vadose Zone SoilIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTSGLNPSGDLEATPEFRLHLVQVGTDRLFAA*
Ga0137416_1018478433300012927Vadose Zone SoilLLVESWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLEPSGDLEATPEFRLHLVQVVTDRLFAA*
Ga0137416_1057203133300012927Vadose Zone SoilEAWFPASPAPYAIVEESRRHGDFALAGAVRAGDRLALFGVAPTPVLADPHDPTKGLRPSGDLEASPEFRVHLVKVLTERAFAP*
Ga0137410_1039960813300012944Vadose Zone SoilRRHGDFALAGVVRAGDRLALFGVAPTPVLADPKDPTRGLQPSGDLEATPEFRLHLVKVLTGRAFAA*
Ga0126375_1119643713300012948Tropical Forest SoilEAWFPAHDKAEVGVLEESRRHGDFAMAGVARYRDRVALFGVAGTPVVADPDDPTRGLQPSGDLEASPEFKLHLVRVLVARAYGRAG*
Ga0120179_100376813300013763PermafrostGAGPVAIAEEARRHGDFALAGAVRAGGRLALFGVAMRPVLADPADPTRGLQPSADAECSPEFRLHLVREMVARVMSA*
Ga0120155_100244913300013768PermafrostAGPVAIAEEARRHGDFALAGAVRAGGRLALFGVAMRPVLADPADPTRGLQPSADAECSPEFRLHLVREMVARVMSA*
Ga0120123_112420623300013770PermafrostGDYAMAGAVRAGERLTLFGVAPTPVVADPKNPTGGLQPSGDIEASPEFRKHLVEVLTQDLFAA*
Ga0134081_1037127923300014150Grasslands SoilAWFPKSPKPFAIFEESRRHGDFALAGVVRAGDTLALFGVAPTPVLADAKDPSRGLQPSSDLEATPEFRLHLVRALTLKAFAA*
Ga0120171_107122533300014827PermafrostHGDFALAGAVRAGDRLALFGVAPTPVLADPKNPTQGLQPSGDVEASPEFRLHLVQVLTDRVFAA*
Ga0066655_1082978723300018431Grasslands SoilESRRHGDFALAGVVRAVDRLALFGVAPTPVLADPLDPGRGLQPSGDLEATPDFRIHLVRVLSEKAFAA
Ga0210399_1018345433300020581SoilESRRHGDFALAGVVRAADRLALFGVAPTPVLADSRDPVRGLQPSGDLEATPQFRLHLVRVLTEKAFAA
Ga0210394_1013895613300021420SoilLAGVVRAAHRLALFGVAPTPVLADSRDPVRGLQPSGDLEATPEFRLHLVRVLTEKAFAA
Ga0210384_1068765633300021432SoilSGGVFAIIEESRRHGDFALAGVVRARDRLALFGVAPTPVLADPRDPTRGLHPSGDLEASPEFRLHLVRTLTEKAFAA
Ga0210410_1130203813300021479SoilGDFALGGVVRATDRLALFGVAPTPVLADPSDPTKGLQPSGDLEATSEFRLHLVRVLTEKVFAA
Ga0247676_104235713300024249SoilIEESRRHGDFALAGVVRAADRLALFGVAPTPVLADPREPAKGLRPSGDLEASAEFRLHLVRVLAGKAFAA
Ga0207684_1112744123300025910Corn, Switchgrass And Miscanthus RhizosphereDELLIEAWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTRGLEPSGDLEATPEFRLHLVQVLCDRLFAA
Ga0207664_1167653223300025929Agricultural SoilHGDFALAGAVRAGDRLALFGVAPTPVLADPRDPAKGLRPSGDLEASPEFRLHLVRVLTERAFAA
Ga0209154_101629053300026317SoilLEESRRHGDFALAGVVRAAEKLALFGVAPTPVLADPRDPARNLEPSGDIEATPEFRIHLVKVLTERAFAA
Ga0209647_124512523300026319Grasslands SoilRHGDFALAGVVRAGDRLALFGVAPTPVLADPSDPARGLQPSGDLEASPEFRLHLVRVLTERALAA
Ga0209687_128279313300026322SoilHAILEESRRHGDFALAGVVRAGERLTLFGVAPTPVMADRADPARGLQPSGDLEATPEFRLHLVRVLADKAFAA
Ga0209470_105361033300026324SoilRRHGDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA
Ga0209801_133151113300026326SoilWFPAVSGEHAILEESRRHGDFALAGVVRAGDRLALFGVAGTPVIADRGDPTRGLQPSGDLEATAEFRLHLVRVLTEQAFAA
Ga0209266_104457433300026327SoilRHGDFALAGVVRASDRLALFGVAPTPVLADPRDPARGLEPSRDLEASPDFRLHLIRVLTEQAFAA
Ga0209473_131705313300026330SoilLEESRRHGDFALAGVVRAGDRLALFGVAGTPVMAERGDPTRGLQPSGDLEATAEFRLHLVRVLTEQAFAA
Ga0209803_120764313300026332SoilSRRHGDFALAGVVRAAEKLALFGVAPTPVLADPRDPTRNLEFSGDIEATPEFRIHLVKVLTERAFAA
Ga0209057_108561813300026342SoilAWFPKSPKPFAILEESRRHGDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA
Ga0209057_124745823300026342SoilFETTLAPDEVLVEAWFPSSSKPYSVIEESRRHGDFALAGVVRANDRLALFGVAPTPVLADPRDPARGLEPSRDLEASPDFRLHLIRVLTEQAFAA
Ga0209806_134085413300026529SoilARRHGDFALAGAARAGDRVALFGVATKPLLADPADPTRGLSPSSDPECSPDFRLHLVREMVARVMAS
Ga0209058_101936573300026536SoilGDFALAGVVRAGDKLALFGVAPTPVLADARDPARGLQPSGDLEATPEFRLHLVRALTLKAFAA
Ga0209805_115621033300026542SoilFPATRGPVAIAEEARRHGDFALAGAARAGDRVALFGVATKPLLADPADPTRGLSPSSDPECSPDFRLHLVREMVARVMAS
Ga0209474_1011863913300026550SoilDFAMAGAVRAGDRLVVFGVATRPLLADPADPTRGLSPSAEPECSPEFRLHLLAAVVERVMGA
Ga0208995_108591213300027388Forest SoilFSGSFAVIEESRRHGDFALAGVVRAGDRLTLFGVGPTPVLADPNDPTRGLSPSGDLEASPEFRLHLIKVLTERAFAA
Ga0208993_105958223300027480Forest SoilALAGAVRAGTRLALFGVAPTPVLADPLDPARGLRPSGDLEATPEFRLHLVRVLTERVLAA
Ga0209117_117151813300027645Forest SoilGDFALAGAVRAGDRLALFGVAMTPVLADPKDPTRGLQPSGDLEASPAFRLHLVRVLTERVFAA
Ga0209388_113456813300027655Vadose Zone SoilYSGSFAVVEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADPNDPTRGLQPSGDLEATPEFRLHLVKVLTERAFAA
Ga0209009_114634623300027667Forest SoilVRAWFPAFTGPFAVIEETRRHGDFALAGVVRAGDRLALFGAAPTPVLADPEDPTNGLRPSGDLEATPEFRLHLIKVLTERAFAA
Ga0209118_119853023300027674Forest SoilGDFALAGVVRGSDRLALFGVAPTPVLADPRDPVKGLQPSGDLEATSEFRLHLVRVLTEKAFAA
Ga0209166_1063479823300027857Surface SoilEESRRHGDFALAGVVRAGDRLALFGVAPTPVLADPADPARGLQPSGDLEASAEFRLHLVRVLSDRAFAA
Ga0209283_1073817623300027875Vadose Zone SoilAPDELVVEAWFPASTGKYAIAEESRRHGDFALAGGVRYGDRLALFGVAPTPVLADPKNPTTGLQPSGDLEATPEFRLHLVQVVTDRLFAA
Ga0209488_1096072313300027903Vadose Zone SoilESRRHGDFALAGAVRAGTRLALFGVAPTPVLADPADPTRDLRPSGDLEATPEFRLHLVRVLTERVVAA
Ga0307374_1059081523300031670SoilEEVRRNGDFAMAGAVRAGDRLAVFGVATRPWLADPADPTRGLSPSAEPECSPEFRLHLLQALVERVMTA
Ga0307477_1048451133300031753Hardwood Forest SoilHGKYAIAEESRRHGDFALAGAVRYGDRLALFGVAPTPVMADPHDPTRGLQPSGDLEATPEFRLHLVQALTDRVFAA
Ga0307473_1018529533300031820Hardwood Forest SoilIAPDELLVEAWFPRSPKPFAILEESRRHGDFALAGVVRSSDRLALFGVAPTPVLADAKDPARGLQPSGDLEATPEFRLHLVRALTEKAFVA
Ga0318551_1029081733300031896SoilFALAGVVRCGDSLALFGVAPTAVLVDPANPTEGLQPSGDLEATPQFRLHLVRVLTEKVMA
Ga0307470_1150952613300032174Hardwood Forest SoilALAGVVRAGDRLALFGVAPTAVLADAKDPARGLQPSGDLEATPEFRLHLVRALTEKAFAA
Ga0307472_10031114713300032205Hardwood Forest SoilRRHGDFALAGVVRAGDRLALFGVAPTAVLADAKDPARGLQPSGDLEATPEFRLHLVRALTEKAFAA
Ga0306920_10189317933300032261SoilFALAGVVRSADALALFGVAPTPVLADPGDPARGLTPTSDLEATSEFKLHLVRVLAERAFA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.