Metagenome / Metatranscriptome Family F074166

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	64 residues
Representative Sequence	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRDA
Number of Associated Samples	71
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.17 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (41.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (56.667 % of family members)
Environment Ontology (ENVO)	Unclassified (56.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.84% β-sheet: 0.00% Coil/Unstructured: 45.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01381	HTH_3	5.83
PF13560	HTH_31	5.00
PF00476	DNA_pol_A	4.17
PF00271	Helicase_C	1.67
PF03592	Terminase_2	1.67
PF12728	HTH_17	1.67
PF10979	DUF2786	1.67
PF01612	DNA_pol_A_exo1	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	4.17
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Viruses	superkingdom	All Organisms → Viruses	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	23.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	23.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.17 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	23.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	23.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	23.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.83 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	23.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.83 %
Nitratireductor aquibiodomus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor aquibiodomus	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	23.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Xanthomarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina	0.83 %
Nitratireductor aquibiodomus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor aquibiodomus	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	23.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.50 %
Xanthomarina gelatinilytica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	0.83 %
Nitratireductor aquibiodomus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor aquibiodomus	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001419\|JGI11705J14877_10170958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300005512\|Ga0074648_1016158	All Organisms → Viruses → Predicted Viral	4453	Open in IMG/M
3300006025\|Ga0075474_10019473	All Organisms → Viruses → Predicted Viral	2478	Open in IMG/M
3300006025\|Ga0075474_10211229	Not Available	592	Open in IMG/M
3300006027\|Ga0075462_10076915	Not Available	1048	Open in IMG/M
3300006637\|Ga0075461_10243078	Not Available	529	Open in IMG/M
3300006752\|Ga0098048_1008622	All Organisms → Viruses → Predicted Viral	3714	Open in IMG/M
3300006802\|Ga0070749_10108109	All Organisms → Viruses → Predicted Viral	1640	Open in IMG/M
3300006802\|Ga0070749_10305369	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	891	Open in IMG/M
3300006802\|Ga0070749_10438394	Not Available	717	Open in IMG/M
3300006802\|Ga0070749_10644064	Not Available	569	Open in IMG/M
3300006810\|Ga0070754_10282047	Not Available	750	Open in IMG/M
3300006810\|Ga0070754_10399177	Not Available	602	Open in IMG/M
3300006916\|Ga0070750_10142823	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300006916\|Ga0070750_10341050	Not Available	634	Open in IMG/M
3300006919\|Ga0070746_10294804	Not Available	746	Open in IMG/M
3300006919\|Ga0070746_10392392	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	623	Open in IMG/M
3300006925\|Ga0098050_1165310	Not Available	555	Open in IMG/M
3300007344\|Ga0070745_1324263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300007539\|Ga0099849_1190765	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	775	Open in IMG/M
3300007542\|Ga0099846_1029309	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300008012\|Ga0075480_10419169	Not Available	656	Open in IMG/M
3300010296\|Ga0129348_1161239	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	773	Open in IMG/M
3300010300\|Ga0129351_1245408	Not Available	686	Open in IMG/M
3300010300\|Ga0129351_1360455	Not Available	545	Open in IMG/M
3300016771\|Ga0182082_1111616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor aquibiodomus	918	Open in IMG/M
3300017818\|Ga0181565_10009827	All Organisms → cellular organisms → Bacteria	7225	Open in IMG/M
3300017818\|Ga0181565_10192704	Not Available	1405	Open in IMG/M
3300017818\|Ga0181565_10600791	Not Available	706	Open in IMG/M
3300017950\|Ga0181607_10150362	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica	1414	Open in IMG/M
3300017951\|Ga0181577_10007121	Not Available	8492	Open in IMG/M
3300017951\|Ga0181577_10238756	All Organisms → Viruses → Predicted Viral	1200	Open in IMG/M
3300017951\|Ga0181577_10583625	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	691	Open in IMG/M
3300017951\|Ga0181577_10770522	Not Available	581	Open in IMG/M
3300017951\|Ga0181577_10818643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300017951\|Ga0181577_10842552	Not Available	550	Open in IMG/M
3300017952\|Ga0181583_10009972	All Organisms → cellular organisms → Bacteria	6930	Open in IMG/M
3300017956\|Ga0181580_10076151	All Organisms → Viruses → Predicted Viral	2493	Open in IMG/M
3300017956\|Ga0181580_10924330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300017957\|Ga0181571_10678000	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300017957\|Ga0181571_10929028	Not Available	511	Open in IMG/M
3300017958\|Ga0181582_10057470	All Organisms → cellular organisms → Bacteria → Proteobacteria	2924	Open in IMG/M
3300017964\|Ga0181589_10204383	All Organisms → Viruses → Predicted Viral	1373	Open in IMG/M
3300017964\|Ga0181589_10242793	Not Available	1235	Open in IMG/M
3300017964\|Ga0181589_10510822	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	775	Open in IMG/M
3300017964\|Ga0181589_10819123	Not Available	576	Open in IMG/M
3300017967\|Ga0181590_10254058	All Organisms → Viruses → Predicted Viral	1297	Open in IMG/M
3300017967\|Ga0181590_10679627	Not Available	696	Open in IMG/M
3300017967\|Ga0181590_10683707	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	693	Open in IMG/M
3300017967\|Ga0181590_10849959	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	604	Open in IMG/M
3300017967\|Ga0181590_10850336	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	604	Open in IMG/M
3300017968\|Ga0181587_10957507	Not Available	527	Open in IMG/M
3300017969\|Ga0181585_10120182	Not Available	1951	Open in IMG/M
3300017969\|Ga0181585_10210724	All Organisms → Viruses → Predicted Viral	1388	Open in IMG/M
3300017986\|Ga0181569_10079783	Not Available	2338	Open in IMG/M
3300017986\|Ga0181569_10312418	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1087	Open in IMG/M
3300018036\|Ga0181600_10087505	All Organisms → Viruses → Predicted Viral	1869	Open in IMG/M
3300018049\|Ga0181572_10713001	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	603	Open in IMG/M
3300018416\|Ga0181553_10188815	All Organisms → Viruses → Predicted Viral	1199	Open in IMG/M
3300018416\|Ga0181553_10480591	Not Available	666	Open in IMG/M
3300018416\|Ga0181553_10575263	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	596	Open in IMG/M
3300018417\|Ga0181558_10673290	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	528	Open in IMG/M
3300018418\|Ga0181567_10506066	Not Available	789	Open in IMG/M
3300018418\|Ga0181567_10594639	Not Available	715	Open in IMG/M
3300018420\|Ga0181563_10596363	Not Available	614	Open in IMG/M
3300018420\|Ga0181563_10755022	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	535	Open in IMG/M
3300018421\|Ga0181592_10138532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1865	Open in IMG/M
3300018421\|Ga0181592_10396174	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	976	Open in IMG/M
3300018421\|Ga0181592_10662698	Not Available	701	Open in IMG/M
3300018421\|Ga0181592_10782110	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	630	Open in IMG/M
3300018424\|Ga0181591_10147166	Not Available	1889	Open in IMG/M
3300018424\|Ga0181591_10639161	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	756	Open in IMG/M
3300019708\|Ga0194016_1048818	Not Available	535	Open in IMG/M
3300020054\|Ga0181594_10336220	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	671	Open in IMG/M
3300020189\|Ga0181578_10108222	All Organisms → Viruses → Predicted Viral	1547	Open in IMG/M
3300020189\|Ga0181578_10313224	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	718	Open in IMG/M
3300020189\|Ga0181578_10337040	Not Available	681	Open in IMG/M
3300020810\|Ga0181598_1272720	Not Available	613	Open in IMG/M
3300021335\|Ga0213867_1074933	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300021368\|Ga0213860_10053312	Not Available	1731	Open in IMG/M
3300021368\|Ga0213860_10290123	Not Available	715	Open in IMG/M
3300021379\|Ga0213864_10474632	Not Available	628	Open in IMG/M
3300022050\|Ga0196883_1012009	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300022050\|Ga0196883_1044681	Not Available	537	Open in IMG/M
3300022069\|Ga0212026_1034558	Not Available	748	Open in IMG/M
3300022069\|Ga0212026_1048537	Not Available	639	Open in IMG/M
3300022149\|Ga0196907_106758	Not Available	605	Open in IMG/M
3300022159\|Ga0196893_1029358	Not Available	516	Open in IMG/M
3300022914\|Ga0255767_1317729	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	565	Open in IMG/M
3300022934\|Ga0255781_10069767	All Organisms → Viruses → Predicted Viral	2006	Open in IMG/M
3300022934\|Ga0255781_10072496	All Organisms → Viruses → Predicted Viral	1957	Open in IMG/M
3300022935\|Ga0255780_10036156	All Organisms → Viruses → Predicted Viral	3385	Open in IMG/M
3300022937\|Ga0255770_10403134	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	594	Open in IMG/M
3300023087\|Ga0255774_10131315	All Organisms → Viruses → Predicted Viral	1387	Open in IMG/M
3300023087\|Ga0255774_10386316	Not Available	636	Open in IMG/M
3300023116\|Ga0255751_10489156	Not Available	584	Open in IMG/M
3300023172\|Ga0255766_10196556	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300023172\|Ga0255766_10578822	Not Available	501	Open in IMG/M
3300023176\|Ga0255772_10193257	Not Available	1163	Open in IMG/M
3300023176\|Ga0255772_10356695	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	752	Open in IMG/M
3300023176\|Ga0255772_10504487	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	581	Open in IMG/M
3300023180\|Ga0255768_10037337	All Organisms → Viruses → Predicted Viral	3756	Open in IMG/M
3300023180\|Ga0255768_10310634	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	879	Open in IMG/M
3300023180\|Ga0255768_10476912	Not Available	638	Open in IMG/M
3300025070\|Ga0208667_1005106	All Organisms → Viruses → Predicted Viral	3591	Open in IMG/M
3300025610\|Ga0208149_1004673	All Organisms → Viruses → Predicted Viral	4530	Open in IMG/M
3300025610\|Ga0208149_1083850	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	782	Open in IMG/M
3300025674\|Ga0208162_1051669	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1378	Open in IMG/M
3300025759\|Ga0208899_1107894	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300025759\|Ga0208899_1238477	Not Available	549	Open in IMG/M
3300025769\|Ga0208767_1059111	All Organisms → Viruses → Predicted Viral	1733	Open in IMG/M
3300025818\|Ga0208542_1171153	Not Available	578	Open in IMG/M
3300025828\|Ga0208547_1082479	All Organisms → Viruses → Predicted Viral	1024	Open in IMG/M
3300025889\|Ga0208644_1085224	All Organisms → Viruses → Predicted Viral	1603	Open in IMG/M
3300027917\|Ga0209536_100807487	All Organisms → Viruses → Predicted Viral	1162	Open in IMG/M
3300029345\|Ga0135210_1034859	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300034374\|Ga0348335_045641	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300034374\|Ga0348335_086300	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1038	Open in IMG/M
3300034375\|Ga0348336_194845	Not Available	547	Open in IMG/M
3300034418\|Ga0348337_031405	All Organisms → Viruses → Predicted Viral	2435	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.50%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	56.67%
Coastal	Environmental → Aquatic → Marine → Coastal	36.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.33%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Harbor	Environmental → Aquatic → Marine → Harbor	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	56.67%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	36.67%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.83%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.83%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	56.67%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	30.83%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.33%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.50%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.83%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.83%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.83%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019708	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MG	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022149	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (v3)	Environmental	Open in IMG/M
3300022159	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)	Environmental	Open in IMG/M
3300022914	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029345	Marine harbor viral communities from the Indian Ocean - SCH1	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11705J14877_101709582	3300001419	Saline Water And Sediment	MREDLKQHVTNLLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLKELRDE*
Ga0074648_101615813	3300005512	Saline Water And Sediment	MREDLKQHVTNLLSNYLEDLRYWIECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLRELKDA*
Ga0075474_100194738	3300006025	Aqueous	MREGLKQEATALLENYLEDLRYWVAYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDG*
Ga0075474_102112292	3300006025	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA*
Ga0075462_100769152	3300006027	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELKNA*
Ga0075461_102430783	3300006637	Aqueous	MREGLKQEATALLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRD
Ga0098048_10086224	3300006752	Marine	MREGLKQEAISLLSNYLADIEYWCEVHDADGINYVTSGTPAFGSMEDANAYRVMVKAVYKEFKNA*
Ga0070749_101081095	3300006802	Aqueous	NMREGLKQEATALLENYLEDLRYWVAYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDG*
Ga0070749_103053693	3300006802	Aqueous	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKELRDV*
Ga0070749_104383942	3300006802	Aqueous	MMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHAMVKSVLKEFKNA*
Ga0070749_106440643	3300006802	Aqueous	LRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA*
Ga0070754_102820474	3300006810	Aqueous	LSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRLMVKVVLKEMKDAV*
Ga0070754_103991772	3300006810	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELKDE*
Ga0070750_101428233	3300006916	Aqueous	MMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKAYHVMVKSVLKELQDA*
Ga0070750_103410503	3300006916	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTACTPPFETLEEANAYRLMVKAVLKEMKDAV*
Ga0070746_102948041	3300006919	Aqueous	QGAIVLLSKYLGDIDYWCEVHDADGINSVTACTPPFETLEEANAYRLMVKAVLKEMKDAV
Ga0070746_103923922	3300006919	Aqueous	MREGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDV*
Ga0098050_11653101	3300006925	Marine	TRRKKVREGLKQEAISLLSNYLADIEYWCEVHDADGINYVTSGTPAFGSMEDANAYRVMVKAVYKEFKNA*
Ga0070745_13242631	3300007344	Aqueous	MREGLKQKATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLKEMKDA*
Ga0099849_11907654	3300007539	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKEMKDA*
Ga0099846_10293091	3300007542	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVL
Ga0075480_104191692	3300008012	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRLMVKSVLKELRDV*
Ga0129348_11612391	3300010296	Freshwater To Marine Saline Gradient	KKMREELKKEAVALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKEMKDA*
Ga0129351_12454084	3300010300	Freshwater To Marine Saline Gradient	IVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA*
Ga0129351_13604552	3300010300	Freshwater To Marine Saline Gradient	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHAMVKSVLKEMKDA*
Ga0182082_11116162	3300016771	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLKEMKDA
Ga0181565_1000982717	3300017818	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANEYRVMVKAVLKEFKDA
Ga0181565_101927042	3300017818	Salt Marsh	MRKDLKQHVTNLLSNYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0181565_106007911	3300017818	Salt Marsh	AIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHETVKSVLKELKNA
Ga0181607_101503625	3300017950	Salt Marsh	MMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELKNA
Ga0181577_100071215	3300017951	Salt Marsh	MREDLKQHVTNLLSNYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0181577_102387563	3300017951	Salt Marsh	MREGLKQDIEGLLENYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMCDG
Ga0181577_105836252	3300017951	Salt Marsh	MREGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPFFETIEDAKEYHVMVKSVLKEFKDA
Ga0181577_107705223	3300017951	Salt Marsh	MNSGKNGKRMKKMSKGLKQEVIALLSNYLEDLRYWVECYEVDGINSTTAGTPSFDTLDDANAYRTMVKAVLKEFKNG
Ga0181577_108186432	3300017951	Salt Marsh	MREGLKRQAIVLLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLKEMKDA
Ga0181577_108425522	3300017951	Salt Marsh	MREELKKEAIALLENYLEDLRYWCGNYEVDGVNFVTSGTPSFETIEDAKAYHVMVKSVLKEFKNA
Ga0181583_1000997218	3300017952	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKEMRDG
Ga0181580_1007615110	3300017956	Salt Marsh	MMRKDLKQHVTNLLSNYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0181580_109243302	3300017956	Salt Marsh	MREGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHLMVKSVLKEFKNA
Ga0181571_106780004	3300017957	Salt Marsh	RVMFIGRKKMREGLKQEATALLSNYLGDIDYWCEVHDADGINYVTAGTPSFDTWEDANAYRVMVKAVLKELRDV
Ga0181571_109290281	3300017957	Salt Marsh	RSWTMREELKKEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHETVKSVLKELKNA
Ga0181582_100574702	3300017958	Salt Marsh	MREGLKRQAIVLLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDA
Ga0181589_102043835	3300017964	Salt Marsh	MREGLKQDIEGLLENYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0181589_102427932	3300017964	Salt Marsh	MREELKKEAIALLENYLEDLRYWCGNYEVDGVNFVTSGTPSFETIEDAKAYHVMVKSVLKELKNA
Ga0181589_105108221	3300017964	Salt Marsh	GLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANEYRVMVKAVLKELRDV
Ga0181589_108191233	3300017964	Salt Marsh	MREDLKQHVRNLLSNYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0181590_102540582	3300017967	Salt Marsh	MREELKKEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELKNA
Ga0181590_106796273	3300017967	Salt Marsh	MMREELKKEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHLMVKSVLKEFKNA
Ga0181590_106837071	3300017967	Salt Marsh	MREGLKQDIEGLLENYLEDLRYWVGYYEVDGINSTTAGTPFFETIEDAKAYHVMVKAVLKEMRDG
Ga0181590_108499591	3300017967	Salt Marsh	EGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDA
Ga0181590_108503362	3300017967	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDV
Ga0181587_109575071	3300017968	Salt Marsh	RKKMREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRDA
Ga0181585_101201824	3300017969	Salt Marsh	MMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHETVKSVLKELKNA
Ga0181585_102107245	3300017969	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANEYRVMVKAVLKELRDG
Ga0181569_100797835	3300017986	Salt Marsh	MREDLKQHVTNLLSNYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHVMVKAVLKEFKDA
Ga0181569_103124181	3300017986	Salt Marsh	MREGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPPFETIEDANEYRVMVKAVLKEFKDA
Ga0181600_100875053	3300018036	Salt Marsh	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELKNA
Ga0181572_107130012	3300018049	Salt Marsh	MREGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHETVKSVLKEFKKVMQNEKSNAKGEK
Ga0181553_101888152	3300018416	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0181553_104805913	3300018416	Salt Marsh	LKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRD
Ga0181553_105752633	3300018416	Salt Marsh	MMREELKKEAIALLENYLEDLRYWVAYYEVDGINSTTAGTPSFETIEDAKAYHVMVKAVLKEMRDG
Ga0181558_106732902	3300018417	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRDA
Ga0181567_105060663	3300018418	Salt Marsh	MRKELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKAYHVMVKAVLKEMCDG
Ga0181567_105946391	3300018418	Salt Marsh	KKMREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLKELCDA
Ga0181563_105963633	3300018420	Salt Marsh	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKAYHVMVKSVLKDFSDA
Ga0181563_107550221	3300018420	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANAYRVMVKAVLK
Ga0181592_101385322	3300018421	Salt Marsh	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHETVKSVLKELKNA
Ga0181592_103961743	3300018421	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDA
Ga0181592_106626983	3300018421	Salt Marsh	MREGLKQDIEGLLENYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKELRDAVKSGCIS
Ga0181592_107821101	3300018421	Salt Marsh	WTMMREELKKEAIALLENYLEDLRYWCGNYEVDGVNFVTSGTPSFETIEDAKAYHVMVKSVLKEFKNA
Ga0181591_101471661	3300018424	Salt Marsh	IALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHAMVKSVLKEFKNA
Ga0181591_106391612	3300018424	Salt Marsh	MMREELKKEAIALLENYLEDLRYWCGNYEVDGVNFVTSGTPSFETIEDAKAYHVMVKSVLKEFKNA
Ga0194016_10488181	3300019708	Sediment	LKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHAMVKSVLKEFKN
Ga0181594_103362201	3300020054	Salt Marsh	RKKMREGLKQEATALLSNYLGDIDYWCEVHDADGINYVTAGTPSFDTWEDANAYRVMVKAVLKELRDV
Ga0181578_101082225	3300020189	Salt Marsh	MMREELKKEAIALLENYLEDLRYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0181578_103132243	3300020189	Salt Marsh	KQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDV
Ga0181578_103370401	3300020189	Salt Marsh	MNMREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0181598_12727203	3300020810	Salt Marsh	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELK
Ga0213867_10749334	3300021335	Seawater	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEDANEYRVMVKAVLKEMKD
Ga0213860_100533123	3300021368	Seawater	MSKELKQEVKALLESYLDDFRYWLDANMEVDSINSITSGIPSFETIEDAKEYHETVKSVLKELEDA
Ga0213860_102901233	3300021368	Seawater	MRKELKQEVKDLLESYLDDFRYWLDANMEVDSINSITSGTPSFETIEDAKEYHEMVKSVLKEFKNA
Ga0213864_104746323	3300021379	Seawater	MREDLKQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRLMVKSVLKELRDV
Ga0196883_10120093	3300022050	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0196883_10446812	3300022050	Aqueous	MREDLRQGAIVLLSKYLGDLDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKELRDV
Ga0212026_10345584	3300022069	Aqueous	MREDLRQGAIVLLSKYLGDLDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0212026_10485373	3300022069	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDG
Ga0196907_1067581	3300022149	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTACTPPFETLEEANAYRLMVKAV
Ga0196893_10293581	3300022159	Aqueous	GTLMLLRCGPRRRKMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELKDE
Ga0255767_13177292	3300022914	Salt Marsh	MREELKKEAIDLLENYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0255781_100697671	3300022934	Salt Marsh	QEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRDG
Ga0255781_100724967	3300022934	Salt Marsh	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANEYRVMVKAVLKEMKDA
Ga0255780_1003615610	3300022935	Salt Marsh	MRKDLKQHVTNLLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANEYRVMVKAVLKEFKDA
Ga0255770_104031342	3300022937	Salt Marsh	QEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANAYRVMVKAVLKELRDV
Ga0255774_101313151	3300023087	Salt Marsh	EGLKQEAIDLLENYLEDLRYWVGYYEVDGINSTTAGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0255774_103863162	3300023087	Salt Marsh	MRKDLKQHVTNLLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKEMCDG
Ga0255751_104891563	3300023116	Salt Marsh	KQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDA
Ga0255766_101965561	3300023172	Salt Marsh	MMRKDLKQHVTNLLSNYLEDLQYWCGNYEVDGVNFVTSGTPFFETIEDAKEYHMMVKTVLKELRDD
Ga0255766_105788222	3300023172	Salt Marsh	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHLMVKSVLKEFKNA
Ga0255772_101932574	3300023176	Salt Marsh	MRKDLKQHVTNLLSNYLEDLRYWVECYEVDGINSTTAGTPPFETIEDANEYRVMVKAVLK
Ga0255772_103566953	3300023176	Salt Marsh	MREGLKQEAIALLSNYLGDIDYWCEVHDADGINYVTAGTPSFDTWEDANAYRVMVKAVLKELRDV
Ga0255772_105044873	3300023176	Salt Marsh	ALLSNYLEDLRYWVECYEVDGINSTTAGTPPFDTLEDANAYRVMVKAVLKELRDA
Ga0255768_100373378	3300023180	Salt Marsh	MREGLKQEATALLSNYLGDIDYWCEVHDADGINYVTAGTPSFDTWEDANAYRVMVKAVLKELRDV
Ga0255768_103106342	3300023180	Salt Marsh	MREGLKQDIEGLLENYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKELRDG
Ga0255768_104769122	3300023180	Salt Marsh	MMREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHLMVKSVLKEFKNA
Ga0208667_10051065	3300025070	Marine	MREGLKQEAISLLSNYLADIEYWCEVHDADGINYVTSGTPAFGSMEDANAYRVMVKAVYKEFKNA
Ga0208149_10046735	3300025610	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELKDE
Ga0208149_10838503	3300025610	Aqueous	MREGLKQEATALLENYLEDLRYWVAYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDG
Ga0208162_10516696	3300025674	Aqueous	MREELKKEAIALLENYLEDLRYWVGYYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKEMKDA
Ga0208899_11078944	3300025759	Aqueous	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPPFETLEEANAYRVMVKAVLKELRDV
Ga0208899_12384771	3300025759	Aqueous	RSMNMREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0208767_10591111	3300025769	Aqueous	MREGLKQEATALLENYLEDLRYWVAYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDV
Ga0208542_11711531	3300025818	Aqueous	SKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0208547_10824791	3300025828	Aqueous	MREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKELRDG
Ga0208644_10852241	3300025889	Aqueous	VTLMLLRCGQRSMNMREGLKQEATALLENYLEDLRYWVAYYEVDGINSTTAGTPEFETIEDAKAYHVMVKAVLKELRDG
Ga0209536_1008074873	3300027917	Marine Sediment	MREGLKQEATALLSNYLEDLRYWVECYEVDGINSTTAGTPSFETIEDAKEYHVMVKSVLKELKNA
Ga0135210_10348593	3300029345	Marine Harbor	RKKMREGLKQHVTTLLSNYLEDLRYWCEVHEADGINSVTAGTPPFDTLEDANAYRVMVKAVLKEFKDA
Ga0348335_045641_1518_1721	3300034374	Aqueous	MNMREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMKDA
Ga0348335_086300_3_197	3300034374	Aqueous	MNMREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKEMK
Ga0348336_194845_2_166	3300034375	Aqueous	MREDLRQGAIVLLSKYLGDLDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMV
Ga0348337_031405_422_625	3300034418	Aqueous	MNMREDLRQGAIVLLSKYLGDIDYWCEVHDADGINSVTAGTPPFETLEEANAYRVMVKAVLKELRDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences