NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074129

Metagenome / Metatranscriptome Family F074129

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074129
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 59 residues
Representative Sequence IPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVRW
Number of Associated Samples 99
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.52 %
% of genes near scaffold ends (potentially truncated) 95.83 %
% of genes from short scaffolds (< 2000 bps) 91.67 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.167 % of family members)
Environment Ontology (ENVO) Unclassified
(26.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.833 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 36.36%    Coil/Unstructured: 63.64%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF13186SPASM 62.50
PF03070TENA_THI-4 2.50
PF12697Abhydrolase_6 1.67
PF05016ParE_toxin 1.67
PF09723Zn-ribbon_8 1.67
PF08241Methyltransf_11 0.83
PF13505OMP_b-brl 0.83
PF05402PqqD 0.83
PF03965Penicillinase_R 0.83
PF01799Fer2_2 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.83
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.50 %
UnclassifiedrootN/A2.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001471|JGI12712J15308_10159392All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300001593|JGI12635J15846_10777266All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300004091|Ga0062387_100953760All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300004092|Ga0062389_100372772All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300004092|Ga0062389_102116400All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300004092|Ga0062389_103960902All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005468|Ga0070707_101688832All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005602|Ga0070762_10815802All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005712|Ga0070764_10869336All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005921|Ga0070766_10185994All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300009090|Ga0099827_10047137All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3223Open in IMG/M
3300009521|Ga0116222_1241078All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300009521|Ga0116222_1346952All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300009523|Ga0116221_1551580All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300009636|Ga0116112_1223269All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300009641|Ga0116120_1188143All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009700|Ga0116217_10970355All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009759|Ga0116101_1013201All Organisms → cellular organisms → Bacteria1540Open in IMG/M
3300009759|Ga0116101_1046960All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300009824|Ga0116219_10153883All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300010341|Ga0074045_10637177All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300010379|Ga0136449_100894099All Organisms → cellular organisms → Bacteria1449Open in IMG/M
3300010876|Ga0126361_10502189All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300011079|Ga0138569_1193669All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300011120|Ga0150983_11258088All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300011120|Ga0150983_13059639All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300012917|Ga0137395_11300448All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300014165|Ga0181523_10140839All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300014165|Ga0181523_10234546All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1052Open in IMG/M
3300014201|Ga0181537_10019977All Organisms → cellular organisms → Bacteria4739Open in IMG/M
3300014201|Ga0181537_10817254All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300014489|Ga0182018_10740545All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300014501|Ga0182024_12161868All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300017933|Ga0187801_10055594All Organisms → cellular organisms → Bacteria → Acidobacteria1446Open in IMG/M
3300017975|Ga0187782_10909873All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300017975|Ga0187782_11573634Not Available519Open in IMG/M
3300018013|Ga0187873_1315696All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300018018|Ga0187886_1316333All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300018018|Ga0187886_1386680All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300018023|Ga0187889_10247361All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300018023|Ga0187889_10428398All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300018044|Ga0187890_10353243All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300018062|Ga0187784_11518129All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300018085|Ga0187772_11040174All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300019158|Ga0184580_100133All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300019192|Ga0184603_106183All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300019786|Ga0182025_1203344All Organisms → cellular organisms → Bacteria → Acidobacteria2324Open in IMG/M
3300020581|Ga0210399_10395415All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300020582|Ga0210395_10078328All Organisms → cellular organisms → Bacteria2435Open in IMG/M
3300020583|Ga0210401_11270560All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300021170|Ga0210400_10759971All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300021181|Ga0210388_11500625All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300021401|Ga0210393_10462095All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1036Open in IMG/M
3300021402|Ga0210385_11222867All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300021406|Ga0210386_10952865All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300021477|Ga0210398_10186208All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1691Open in IMG/M
3300021477|Ga0210398_10193304All Organisms → cellular organisms → Bacteria → Acidobacteria1658Open in IMG/M
3300021478|Ga0210402_10669821All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300022531|Ga0242660_1119936All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300022532|Ga0242655_10290536All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300022721|Ga0242666_1185445All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300022732|Ga0224569_107705All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300025434|Ga0208690_1058720All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300025434|Ga0208690_1078655All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025612|Ga0208691_1108798All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300025922|Ga0207646_11276450All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300026551|Ga0209648_10196212All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300026557|Ga0179587_11157031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300027109|Ga0208603_1034697All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300027559|Ga0209222_1068710All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300027562|Ga0209735_1097142All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300027565|Ga0209219_1160689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales537Open in IMG/M
3300027568|Ga0208042_1162092All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300027629|Ga0209422_1072748All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300027667|Ga0209009_1107228All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300027692|Ga0209530_1003370All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5671Open in IMG/M
3300027701|Ga0209447_10153207All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300027767|Ga0209655_10046626All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300027803|Ga0209910_10026641All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300027824|Ga0209040_10082182All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300027824|Ga0209040_10136550All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300027884|Ga0209275_10598047All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300027889|Ga0209380_10000477All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae28258Open in IMG/M
3300027889|Ga0209380_10166195All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300027895|Ga0209624_10869765All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300027905|Ga0209415_10792784All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300028776|Ga0302303_10298889All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300028789|Ga0302232_10365775All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300028789|Ga0302232_10620312All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300028863|Ga0302218_10120184All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300029883|Ga0311327_10366600All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300029922|Ga0311363_10093642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4183Open in IMG/M
3300029943|Ga0311340_10016212All Organisms → cellular organisms → Bacteria9409Open in IMG/M
3300029944|Ga0311352_11193708All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300029944|Ga0311352_11480153All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300029945|Ga0311330_10242282All Organisms → cellular organisms → Bacteria1603Open in IMG/M
3300029986|Ga0302188_10300763All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300030013|Ga0302178_10081131All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300030045|Ga0302282_1339379All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300030057|Ga0302176_10359302All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300030706|Ga0310039_10358362All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300030737|Ga0302310_10215488All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1115Open in IMG/M
3300030738|Ga0265462_12565215All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300030848|Ga0075388_10644322All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300030878|Ga0265770_1012244All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300031236|Ga0302324_101161911All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300031525|Ga0302326_12448745All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300031708|Ga0310686_102276264All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300031708|Ga0310686_108334519All Organisms → cellular organisms → Bacteria → Proteobacteria4321Open in IMG/M
3300031708|Ga0310686_113288559All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300031715|Ga0307476_10562586All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300031754|Ga0307475_10374059All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300031754|Ga0307475_10400297All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1103Open in IMG/M
3300032515|Ga0348332_10809533All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300032515|Ga0348332_12962251All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300032515|Ga0348332_14240417All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300032898|Ga0335072_11357107All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300033888|Ga0334792_177063Not Available523Open in IMG/M
3300034163|Ga0370515_0453176All Organisms → cellular organisms → Bacteria541Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.17%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa10.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.33%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil6.67%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.00%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.33%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.50%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.50%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.50%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.67%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.67%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.83%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.83%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.83%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.83%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.83%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.83%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009641Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011079Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300019158Soil microbial communities from Bohemian Forest, Czech Republic ? CSI1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019192Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022732Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1Host-AssociatedOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027109Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)EnvironmentalOpen in IMG/M
3300027559Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027803Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3SEnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030045Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030848Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030878Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12712J15308_1015939223300001471Forest SoilPNVSIPLSGNFVHSSQNQFGYNFGAGXTRKVPSGXELYAEFRLMHGSANGTTTDVRPITIGVRW*
JGI12635J15846_1077726623300001593Forest SoilIPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVRW
Ga0062387_10095376023300004091Bog Forest SoilFTHSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFMHGGANNITTDFRPITIGVRWGK*
Ga0062389_10037277223300004092Bog Forest SoilACANVSIPLSGSFTHSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFMHGGANNITTDFRPITIGVRWGK*
Ga0062389_10211640013300004092Bog Forest SoilSSSLNEFGYNFGGGVARKMPSGVEIYGEYRFLHGSHNGITTDVRPITIGLRW*
Ga0062389_10396090213300004092Bog Forest SoilRFWEWWGACQNFSVPLNGSFTNSSLNQFGYNIGAGVTRKMPSGVEIYAEYRLMHGSGDHTTTDMRPITIGVRW*
Ga0070707_10168883213300005468Corn, Switchgrass And Miscanthus RhizosphereGFWTWWGACSNVSIPLSGSFVNSSVNQFGYNFGGGVTRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW*
Ga0070762_1081580223300005602SoilSSLNEFGFDAGGGVTRKMPSGVEVYLEYRLMHGSHNGITTDFRPITIGLRW*
Ga0070764_1086933613300005712SoilPLNGSFATSSLNEFGYNVGAGVARKMPSGVEIYAEYRLMHGTHNNIQTDFRPITVGVRW*
Ga0070766_1018599423300005921SoilTSIPLSGSFVNSSLNQFGYNFGGGVTRKMPSGAEIYIEYRLMHGTSNGITTDFRPITIGFRW*
Ga0099827_1004713713300009090Vadose Zone SoilVDTSQNQFGYNFGAGITRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW*
Ga0116222_124107813300009521Peatlands SoilNQFGYNVGAGVTRKMPSGVEIYGEVRIMHGTHNGITTDYRPITIGFRW*
Ga0116222_134695223300009521Peatlands SoilACSNSNISVPLSGNFVNSSQNQFGYNLGGGITRKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW*
Ga0116221_155158023300009523Peatlands SoilSQNQFGYNLGGGITRKMPSGVEIYADFRLMHGSHNGITTDMRPITIGFRW*
Ga0116112_122326923300009636PeatlandVSGDFLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW*
Ga0116120_118814323300009641PeatlandGFYEWWGACPSVSIPLSGSFVNSSQNQFGYNVGGGITRKMPSGVEIYAEYRLTHGSANGTTTDVRPITIGVRW*
Ga0116217_1097035513300009700Peatlands SoilSGSFVNSSLNQFGYNVGAGVTRKMPSGVEIYGEVRIMHGTHNGITTDYRPITIGFRW*
Ga0116101_101320113300009759PeatlandNSSQNHFGYNFGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW*
Ga0116101_104696023300009759PeatlandSSQNEFGYNFGGGITRKMPSGVEVYAEYRFVHGSGNNTTTDFRPITIGVRW*
Ga0116219_1015388323300009824Peatlands SoilLSIPLSGSFVNSSQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW*
Ga0074045_1063717713300010341Bog Forest SoilPLSGSFVNSSLNEFGYNVGAGVARKMPSGVEIYGEFRLVHGSHNGITTDYRPITIGFRW*
Ga0136449_10089409913300010379Peatlands SoilISVPLSGNFVNSSQNQFGYNLGGGIARKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW*
Ga0126361_1050218923300010876Boreal Forest SoilSLNQFGYNVGVGVTRKLPSGVEFYGEGRIMHGTHNGITTDYRPITIGFRW*
Ga0138569_119366923300011079Peatlands SoilEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW*
Ga0150983_1125808813300011120Forest SoilQNAFGYNFGGGVTRKMPSGVELYVEYRFTHGSHNGITTDVRPITLGFRW*
Ga0150983_1305963913300011120Forest SoilFSIPLSGNFVNSSLNQFGYNFGAGVTAKTPSGVEFYGEVRLMHGTHNGITTDYRPITIGFRW*
Ga0137395_1130044823300012917Vadose Zone SoilQNQFGYNFGAGVTRKMPSGVEIYAEFRFTHGSHNGITTDVRPITIGLRW*
Ga0181523_1014083913300014165BogALSLPLSGSFTSTAQNEFGYYVGAGVTRKMPSGVEVYAEYRLIHGSANGTTTDMRPITIGVRW*
Ga0181523_1023454623300014165BogSSQNHFGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITVGVRW*
Ga0181537_1001997713300014201BogSSVNEFGYNFGAGVTRKMPSGVELYVEYRLTHGSRNGITTDVRPITLGFRW*
Ga0181537_1081725423300014201BogWGACQNSNYNIPLNGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPVTIGFRW*
Ga0182018_1074054523300014489PalsaWGACQNSNFSLPLSNSFVNSSLNEFGYNVGGGVTCKMPSGVEIYGEVRIMHGSHNGITTDYRPITIGFRW*
Ga0182024_1216186813300014501PermafrostDFVNTNQNEFGYNAGGGVARKMPSGVEIYAEYRLMHGNHNSIQTDVRPITIGVRW*
Ga0187801_1005559433300017933Freshwater SedimentNPFWTWWGACPNVSIPLSGNFLNSSLNEFGYNLGAGVTRKMPSGVELYAEFRLTHGSHNNITTDVRPITIGLRW
Ga0187782_1090987313300017975Tropical PeatlandWWTGCPSVSIPLSGNFIHESQNALGINAGVGITRKMPSGVELYGEFRLMHGSANGTTTDVRPITLGVRW
Ga0187782_1157363413300017975Tropical PeatlandACLTTNASIPLNNSFTTSSLNEFGYNVGAGITRKMPSGVEIYAEYRLMHGSRTGITTDFRPITIGFRW
Ga0187873_131569623300018013PeatlandSPFWAWWGACTGGVSIPVSGDFLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW
Ga0187886_131633323300018018PeatlandGSFVNSSQNQFGYNVGGGITRKMPSGVEIYAEYRLTHGSANGTTTDVRPITIGVRW
Ga0187886_138668023300018018PeatlandFVNSSQNHFGYNFGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0187889_1024736123300018023PeatlandACKNFSIPLSGNFTSTSQDQFGYNFGGGVARKMPSGVEIYAEYRFMHGSGNGVTTDFRPITIGVRW
Ga0187889_1042839813300018023PeatlandLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARLTHGKNGNITTDVRPITIGVRW
Ga0187890_1035324313300018044PeatlandGDFVNSSQNHFGYNVGGGITRKMPSGVEIYAEYRLTHGSGNSTTTDVRPITIGVRW
Ga0187784_1151812923300018062Tropical PeatlandYNFGGGVTRKTPSGVEVYAEFRFMHGSGNNVTTDFRPITIGFRW
Ga0187772_1104017413300018085Tropical PeatlandWWQGTCFNGSLPLNGHFVNTSQNQFGYNVGAGVARKMPSGVEIYAEFRLMHGSNNGTTTDVRPITVGVRW
Ga0184580_10013313300019158SoilGDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0184603_10618323300019192SoilWGACRGVSIPVSGDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0182025_120334433300019786PermafrostLSGSFVTANQNEFGYNVGGGVTRKVPSGAEIYLEYRLTHGSANGTTTDTRPITLGVRW
Ga0210399_1039541523300020581SoilFWNWWGACQNYNFGLAISGSFVNSSLNEFGIDGGGGVTRKMPSGVEIYAEWRIMHGSHNGITTDFRPITIGFRW
Ga0210395_1007832813300020582SoilQFGYNFGGGVTRKMPSGVEIYIEYRLMHGTSNGITTDFRPITIGFRW
Ga0210401_1127056023300020583SoilPLNGSFTSSSMNQFGYNIGAGVTRKMPSGVEIYAEYRLMHGSGDHTTTDIRPITIGVRW
Ga0210400_1075997123300021170SoilNSSLPLSGRFTDSSQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0210388_1150062513300021181SoilSRFWEWWGACQNFSVPLNGSFTSSSLNQFGYNIGAGVTRKMPSGVEIYAEYRFMHGSGDHTTTDIRPITIGVRW
Ga0210393_1046209513300021401SoilSIPLSGSFVHSSQNQFGYNFGGGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVR
Ga0210385_1122286723300021402SoilINNNFVNSSQNEFGYNFGGGITRKMPSGVEIYAEYRFVHGSGNNTTTDFRPITIGVRW
Ga0210386_1095286523300021406SoilVNIPLNGSFVHSSQNQFGYNLGAGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0210383_1067307213300021407SoilGVTRKMPSGAEIYIEYRLMHGTSNGITTDFRPITIGFRW
Ga0210398_1018620833300021477SoilLSGDFVNSSQNHFGYNFGGGITRKMPSGVEIYGEYRLTHGSGDGTTTDVRPITIGVRW
Ga0210398_1019330433300021477SoilNVSIPLSGSFVHSSQNQFGYNFGGGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0210402_1066982113300021478SoilSLSPNGSFVNSSLNEFGYNVGAGVAHKMPSGVEIYGEVRIMHGSHNGITTDYRPVTIGFR
Ga0242660_111993623300022531SoilGYNFGAGVARKFPSGVELYAEYRFMHGSHNGITTDMRPITIGLRW
Ga0242655_1029053623300022532SoilCSNGSIALNGSFVNSTQNAFGYNFGGGVTRKMPSGVEIYVEYRLTHGSHNGVTTDVRPITLGFRW
Ga0242666_118544513300022721SoilPNVSLPLSGDFVNSSQNHFGYNFGGGITRKMPSGVEIYAEWRIMHGSHNGITTDFRPITIGFRW
Ga0224569_10770523300022732RhizosphereYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0208690_105872013300025434PeatlandCANIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0208690_107865523300025434PeatlandPNVSLPLSGDFVNSSQNHVGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0208691_110879823300025612PeatlandGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0207646_1127645013300025922Corn, Switchgrass And Miscanthus RhizosphereNGFWTWWGACSNVSIPLSGSFVNSSVNQFGYNFGGGVTRKMPSGVEIYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0209648_1019621213300026551Grasslands SoilWWGTCFNSSLPLSGKFVNASQNQFGYNFGAGITRKMPSGVEIYAEFRFTHGSHNGITTDVRPITIGLRW
Ga0179587_1115703123300026557Vadose Zone SoilAFWTWWGTCFNSSLPLSGKFVDASQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0208603_103469713300027109Forest SoilTSNFSIPLSGNFVDSSLNQFGYNVGAGVTRKMPSGVEIYGEFRLMHGSHNGITTDYRPITIGFRW
Ga0209222_106871013300027559Forest SoilQNEVGYNFGGGITRKTPSGVEIYAEFRLMHGRANNTTTDVRPITIGVRW
Ga0209735_109714213300027562Forest SoilNVSIPLNGSFVHSSQNQFGYNFGAGVTRKVPSGAEIYAEFRFMHGSANGTTTDVRPITIGVRW
Ga0209219_116068913300027565Forest SoilVDSSQNQFGYNFGGGVTRKMPSGVELYAEYRFTHGSHNGITTDVRPITIGVRW
Ga0208042_116209223300027568Peatlands SoilISVPLSGNFVNSSQNQFGYNLGGGIARKMPSGVEIYAEFRLMHGSHNGITTDMRPITIGFRW
Ga0209422_107274823300027629Forest SoilSIPLSGDFVNSSQNEFGYNFGAGVTRKMPSGVEIYAEYRFTHGSRNGITTDVRPITIGVR
Ga0209009_110722823300027667Forest SoilNFNIPLSGSFVNSSLNQFGYNLGGGVTRKMPSGVEIYGEVRLIHGTHNGITTDYRPITIGFRW
Ga0209530_100337013300027692Forest SoilFFVWWGVCPSVSIPLSGTFTDSSQNQVGYDIGAGITHKMPSGAEIYAEYRLTHGSGYNSTTDVRPITIGVRW
Ga0209447_1015320723300027701Bog Forest SoilGDFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLIHGSANHTTTDLRPITIGVRW
Ga0209655_1004662623300027767Bog Forest SoilGSFVNSSLNQFGIDGGGGITRKMPSGVEVYAEWRIMHGSHNGITTDFRPITIGLRW
Ga0209910_1002664113300027803Thawing PermafrostMCIRDSSSIPLSGDFVHSSVNEFGYNFGGGVTRKTPSGVELYVEYRLTHGSRNGITTDVHPITLGFRW
Ga0209040_1008218213300027824Bog Forest SoilNQFGYTFGGGVARKMPSGAEIYLEFRLMHGSHNGITTDVRPITIGFRW
Ga0209040_1013655013300027824Bog Forest SoilTSTSQNQFGYNVGAGVTRKMPSGVEIYAEYRLMHGSGNGVTTDFRPITIGVRW
Ga0209275_1059804723300027884SoilNSSLNEFGFDAGGGVTRKMPSGVEVYLEYRLMHGSHNGITTDFRPITIGLRW
Ga0209380_1000047713300027889SoilAFIPLSGNFVDSSLNQWGYDFAGGVARKMPSGVEIYAEYRLMHGTASNITTDFRPITIGLRW
Ga0209380_1016619513300027889SoilCSNGSIPLNGSFVNSSQNAFGYNFGGGVTRKTPSGVEIYLEYRFTHGSHNGITTDVRPITLGFRW
Ga0209624_1086976513300027895Forest SoilQNQFGYNFGGGVTRKVPSGVELYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0209415_1079278423300027905Peatlands SoilVSLPLSGDFVNSSQNHVGYNVGGGITRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITIGVRW
Ga0302303_1029888913300028776PalsaVDSNQNSFGYNFGAGITRTLPSGVELYLEARLMHGKNSNVTTDVRPITIGVRW
Ga0302232_1036577523300028789PalsaDSSQNEFGYNFGGGITRKMPSGVEIYAEYRFTHGSHSGITTDIRPITIGVRW
Ga0302232_1062031223300028789PalsaNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0302218_1012018413300028863PalsaGYNVGAGVSRKMPSGVEIYGEFRLLHGSHNGITTDYRPITIGFRW
Ga0311327_1036660013300029883BogVNEFGYNFGGGVTRKTPSGVELYVEYRLTHGSRNGITTDVHPITLGFRW
Ga0311363_1009364273300029922FenLHSNQSAFGYNFGAGVTRKMPSGVEIYAEARITHGKNGNITTDVRPITIGVRW
Ga0311340_10016212133300029943PalsaPVSGNFVDSNQNSFGYNFGAGITRTLPSGVELYLEARLMHGKNSNVTTDVRPITIGVRW
Ga0311352_1119370823300029944PalsaNSNFSIPLSGNFNSTVNEFGYNVGAGVSRKMPSGVEIYGEFRLLHGSHNGITTDYRPITIGFRW
Ga0311352_1148015323300029944PalsaFGYNVGAGITRKVPSGAEIYVEYRVTHGTSNSIHTDFRPITIGVRW
Ga0311330_1024228213300029945BogDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0302188_1030076313300029986BogTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0302178_1008113113300030013PalsaPLSGDFTNSTVNEFGYNIGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPITIGFRW
Ga0302282_133937923300030045FenNQSAFGYNFGAGVTRKMPSGVEIYAEARITHGKNGNITTDVRPITIGVRW
Ga0302176_1035930223300030057PalsaEWWGSCPSVSIPLNGSFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0310039_1035836213300030706Peatlands SoilLSIPLSGSFVNSSQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW
Ga0302310_1021548823300030737PalsaSFVNSNQNEFGYNIGAGVARKMPSGVEIYAEYRLMHGSGNNITTDVRPITIGVRW
Ga0265462_1256521513300030738SoilFAYDFGGGVTRKFPSGAEMYLEGRIMHGSHNNISTDFRPITLGFRW
Ga0075388_1064432213300030848SoilDSSQNHFGYNVGAGVTRKMPSGVEIYAEYRLTHGSGNGTTTDVRPITLGVRW
Ga0265770_101224423300030878SoilVNSSLNQFGYDLGGGVAHKMPSGVEIYAEYRLMHGSHNGITTDFHPITMGFRW
Ga0302324_10116191113300031236PalsaSSFWNWWGACQNSNYNIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEFRLMHGSRNNIQTDYRPITIGFRW
Ga0302326_1244874513300031525PalsaSNFNIPLSGDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITIGFRW
Ga0310686_10227626413300031708SoilDFTNSTVNEFGYNVGAGVTRKMPSGVEIYAEIRLMHGSRNNITTDYRPITVGFRW
Ga0310686_10833451973300031708SoilAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0310686_11328855923300031708SoilFWTWWGACSSLAIPLNGSFVSSNQNEFGYNVGAGVARKMPSGVEIYAEYRLTHGSANGTTTDFRPITVGVRW
Ga0307476_1056258613300031715Hardwood Forest SoilPLNGSFVHSSQNQFGYNLGAGVTRKVPSGVEIYAEFRLMHGSANGTTTDVRPITIGVRW
Ga0307475_1037405913300031754Hardwood Forest SoilGYNIGAGVTRKTPSGVEIYLEYRLMHGTINGITTDFRPITIGFRW
Ga0307475_1040029723300031754Hardwood Forest SoilGACSNSSIPLSGSFVHSSVNSFGYNFGGGVTRKMPSGVELYAEYRLTHGSHNGITTDVRPITLGVRW
Ga0348332_1080953313300032515Plant LitterIPVSGDFVNSTVNAYGYNLGAGVTRKMPSGVEIYAEFRLMHGKNSNVTTDVRPITIGVRW
Ga0348332_1296225123300032515Plant LitterFWTWWGACSSLAIPLNGSFVSSSQNQFGYNVGAGVARKMPSGVEIYAEYRLMHGSGNNTTTDIRPITIGVRW
Ga0348332_1424041723300032515Plant LitterFIHAHQNELGYNAGAGVARKMPSGVEIYAEFRLMHGTHNNIQTDVRPITIGVRW
Ga0335072_1135710713300032898SoilFYKWWTGCPSVSIPLSGNFTHSSQNDFGEFVGAGITRKMPSGVELYVEYRLIHGSANETTTDVRPITLGVRW
Ga0334792_177063_54_2033300033888SoilVNQYGYNFGAGVARKMPSGVEIYAEYRFMHGSGDYTTTDFRPIQIGFRW
Ga0370515_0453176_2_1723300034163Untreated Peat SoilSSFVNSSLNEFGYNVGAGVARKMPSGVEIYGEVRIMHGSHNGITTDYRPITIGFRW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.