Metagenome / Metatranscriptome Family F074107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074107
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	96 residues
Representative Sequence	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Number of Associated Samples	105
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.33 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.833 % of family members)
Environment Ontology (ENVO)	Unclassified (42.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.60% β-sheet: 0.00% Coil/Unstructured: 43.40%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00884	Sulfatase	8.33
PF13515	FUSC_2	5.00
PF13385	Laminin_G_3	2.50
PF12837	Fer4_6	0.83
PF00490	ALAD	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.50 %
Unclassified	root	N/A	15.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.50 %
Unclassified	root	N/A	15.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	62.50 %
Unclassified	root	N/A	15.00 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.00 %
Unclassified	root	N/A	15.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	12.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Unclassified	root	N/A	15.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	12.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.33 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.83 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Unclassified	root	N/A	15.00 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	12.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.33 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Unclassified	root	N/A	15.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.33 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	4.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Unclassified	root	N/A	15.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.33 %
Streptomyces sp. WAC01280	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	4.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003659\|JGI25404J52841_10040249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300004114\|Ga0062593_100867727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	908	Open in IMG/M
3300004479\|Ga0062595_101647004	Not Available	601	Open in IMG/M
3300005327\|Ga0070658_10053682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3271	Open in IMG/M
3300005328\|Ga0070676_10127390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1606	Open in IMG/M
3300005329\|Ga0070683_100172873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2051	Open in IMG/M
3300005330\|Ga0070690_100319694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1118	Open in IMG/M
3300005335\|Ga0070666_10039470	Not Available	3147	Open in IMG/M
3300005336\|Ga0070680_100041619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3725	Open in IMG/M
3300005337\|Ga0070682_100378690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1063	Open in IMG/M
3300005337\|Ga0070682_100503771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	939	Open in IMG/M
3300005337\|Ga0070682_101932647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300005341\|Ga0070691_10341760	Not Available	829	Open in IMG/M
3300005354\|Ga0070675_100143619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2042	Open in IMG/M
3300005354\|Ga0070675_102010732	Not Available	533	Open in IMG/M
3300005356\|Ga0070674_100783645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300005406\|Ga0070703_10047425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1361	Open in IMG/M
3300005434\|Ga0070709_10208330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300005434\|Ga0070709_10208641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1387	Open in IMG/M
3300005434\|Ga0070709_10432362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	988	Open in IMG/M
3300005435\|Ga0070714_100302085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1492	Open in IMG/M
3300005437\|Ga0070710_10306131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300005438\|Ga0070701_10073327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300005439\|Ga0070711_100173496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1645	Open in IMG/M
3300005439\|Ga0070711_100259469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1366	Open in IMG/M
3300005444\|Ga0070694_101204674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300005459\|Ga0068867_101167895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	706	Open in IMG/M
3300005543\|Ga0070672_100265640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1448	Open in IMG/M
3300005544\|Ga0070686_100029498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3338	Open in IMG/M
3300005546\|Ga0070696_100059523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2669	Open in IMG/M
3300005564\|Ga0070664_100091766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2629	Open in IMG/M
3300005577\|Ga0068857_101289874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300005587\|Ga0066654_10251964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	931	Open in IMG/M
3300005614\|Ga0068856_102185165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300005842\|Ga0068858_102310399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300006163\|Ga0070715_10039484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1966	Open in IMG/M
3300006173\|Ga0070716_100209917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1300	Open in IMG/M
3300006755\|Ga0079222_11118317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300006804\|Ga0079221_10428673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	831	Open in IMG/M
3300006806\|Ga0079220_10231916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091	Open in IMG/M
3300006806\|Ga0079220_11071114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300006854\|Ga0075425_100255670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2015	Open in IMG/M
3300006904\|Ga0075424_102578805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300006914\|Ga0075436_100345400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300009092\|Ga0105250_10579715	Not Available	517	Open in IMG/M
3300009093\|Ga0105240_10203305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2320	Open in IMG/M
3300009098\|Ga0105245_11821586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300009098\|Ga0105245_12019434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300009098\|Ga0105245_12220146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300009101\|Ga0105247_10556003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	844	Open in IMG/M
3300009551\|Ga0105238_10791750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300010152\|Ga0126318_10169129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300010152\|Ga0126318_10895156	Not Available	695	Open in IMG/M
3300010373\|Ga0134128_11889901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	657	Open in IMG/M
3300010375\|Ga0105239_13113823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300012198\|Ga0137364_10906799	Not Available	667	Open in IMG/M
3300012200\|Ga0137382_10470363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300012200\|Ga0137382_11326328	Not Available	507	Open in IMG/M
3300012960\|Ga0164301_10425581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300012960\|Ga0164301_10758913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300012985\|Ga0164308_10012002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4767	Open in IMG/M
3300013105\|Ga0157369_12533173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300013307\|Ga0157372_12448684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300014326\|Ga0157380_12288823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300014497\|Ga0182008_10518963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300014968\|Ga0157379_10486957	Not Available	1142	Open in IMG/M
3300015372\|Ga0132256_103491067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300017792\|Ga0163161_10689812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300017937\|Ga0187809_10349272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300018431\|Ga0066655_11394192	Not Available	508	Open in IMG/M
3300018433\|Ga0066667_11342559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300020069\|Ga0197907_10380137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300020069\|Ga0197907_10693821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300021445\|Ga0182009_10159715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300024254\|Ga0247661_1061079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300024323\|Ga0247666_1026245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1231	Open in IMG/M
3300024325\|Ga0247678_1032784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	817	Open in IMG/M
3300024331\|Ga0247668_1110618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300025885\|Ga0207653_10008147	Not Available	3266	Open in IMG/M
3300025898\|Ga0207692_10095339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1622	Open in IMG/M
3300025901\|Ga0207688_10085814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1803	Open in IMG/M
3300025904\|Ga0207647_10038390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3028	Open in IMG/M
3300025905\|Ga0207685_10254498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300025908\|Ga0207643_10014033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4347	Open in IMG/M
3300025909\|Ga0207705_11242876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300025913\|Ga0207695_10614849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300025916\|Ga0207663_10299453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300025916\|Ga0207663_10635746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	841	Open in IMG/M
3300025918\|Ga0207662_10385920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	947	Open in IMG/M
3300025920\|Ga0207649_10140624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1651	Open in IMG/M
3300025924\|Ga0207694_11603149	Not Available	548	Open in IMG/M
3300025926\|Ga0207659_10318119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300025929\|Ga0207664_11711423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300025933\|Ga0207706_10339464	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300025934\|Ga0207686_10212895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300025935\|Ga0207709_10826599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300025936\|Ga0207670_10250967	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300025937\|Ga0207669_10712083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300025940\|Ga0207691_10331201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1304	Open in IMG/M
3300025960\|Ga0207651_11050070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	729	Open in IMG/M
3300026023\|Ga0207677_11280479	Not Available	673	Open in IMG/M
3300026035\|Ga0207703_12071261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300026041\|Ga0207639_11659533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300026075\|Ga0207708_10167156	Not Available	1740	Open in IMG/M
3300026078\|Ga0207702_10078512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2858	Open in IMG/M
3300026142\|Ga0207698_12444559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300027058\|Ga0209111_1022167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300027765\|Ga0209073_10024533	Not Available	1817	Open in IMG/M
3300027765\|Ga0209073_10294756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300027787\|Ga0209074_10246034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300027817\|Ga0209112_10090348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300031198\|Ga0307500_10023736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1341	Open in IMG/M
3300031716\|Ga0310813_10199749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1639	Open in IMG/M
3300031740\|Ga0307468_100847908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	785	Open in IMG/M
3300031908\|Ga0310900_10670998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300031939\|Ga0308174_11762489	Not Available	532	Open in IMG/M
3300032174\|Ga0307470_11592116	Not Available	546	Open in IMG/M
3300032205\|Ga0307472_100775996	Not Available	872	Open in IMG/M
3300032421\|Ga0310812_10167353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	942	Open in IMG/M
3300032898\|Ga0335072_10147481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2893	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.33%
Host-Associated	Host-Associated	41.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.83%
Plants	Host-Associated → Plants	41.67%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.67%
Freshwater	Environmental → Aquatic → Freshwater	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.33%
Loam	Environmental → Terrestrial → Soil → Loam	26.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25404J52841_100402492	3300003659	Tabebuia Heterophylla Rhizosphere	MSSITSERRPQVPSRDDRMAARLTRLALLGHMLRSRAFYEKVAFAAIVVAALAKLGQENQARNFERLAAWNKRQVQRLERKARVLSAGNHSS*
Ga0062593_1008677271	3300004114	Soil	MSSITSEGRPQVPGRHNRAGMRLTRLALLGHMLRSRSFYERVAFAAIVLVALGKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0062595_1016470042	3300004479	Soil	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKRAIQS*
Ga0070658_100536822	3300005327	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS*
Ga0070676_101273902	3300005328	Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0070683_1001728732	3300005329	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070690_1003196942	3300005330	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPSRDGRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNK
Ga0070666_100394702	3300005335	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0070680_1000416192	3300005336	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPSRDGRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070682_1003786902	3300005337	Corn Rhizosphere	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQEHQARSFARLAAWNKRQVQRLERKAKGAVHS*
Ga0070682_1005037711	3300005337	Corn Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKA
Ga0070682_1019326471	3300005337	Corn Rhizosphere	GTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070691_103417602	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKRAIQS*
Ga0070675_1001436192	3300005354	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070675_1020107321	3300005354	Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQEHQARSFARLAAWNKRQVQRLERKAKGAVHS*
Ga0070674_1007836451	3300005356	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTTLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070703_100474251	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQAKSFARLAAWNKRQVERLERKAKDAITPGS*
Ga0070709_102083302	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070709_102086412	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTRLALLGHMLRSRSFYERVAFAVIVLAAAAKLGQENQAKSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0070709_104323622	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070714_1003020852	3300005435	Agricultural Soil	MSSITSERRPQVPGRDDRAGMRLTRLALLGHMLRSRSFYERVAFAVVVLAAAAKLGQENQAKSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0070710_103061311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070701_100733272	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVTFAAIVLVALAKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070711_1001734962	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS*
Ga0070711_1002594691	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070694_1012046741	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS*
Ga0068867_1011678951	3300005459	Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070672_1002656402	3300005543	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNRRQVQRLERKAKSAITPSGS*
Ga0070686_1000294982	3300005544	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070696_1000595232	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070664_1000917662	3300005564	Corn Rhizosphere	SSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0068857_1012898742	3300005577	Corn Rhizosphere	TSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0066654_102519641	3300005587	Soil	MSSITSKGRPQVPGRDNRAGMRLTRLALLGHMLRSRTFYERMAFAGIVLAAMAKLSQENQARNVARLAAWNKRQVERLERKAKDLAHP*
Ga0068856_1021851651	3300005614	Corn Rhizosphere	SSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0068858_1023103992	3300005842	Switchgrass Rhizosphere	SGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070715_100394842	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSHDAGRRPQVPSRDGRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0070716_1002099172	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0079222_111183172	3300006755	Agricultural Soil	MNSITSGGTPRSGKDLAGSQSAGRRPQVPGRDDRAGMRLTRLALLGHMLRSRSFYERVAFAAIVLVAAAKLGQENQAKSLARLAAWNKRQIERLERKAKDAITPGS*
Ga0079221_104286732	3300006804	Agricultural Soil	MSSITSERRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALTKLGHENQAKTFARLAAWNKRQIERLERKAKDAITPGS*
Ga0079220_102319163	3300006806	Agricultural Soil	MSSITSGEMPRSGQDSRGRDNRAAARLTRLALLGHMLRSRGFYERVAFVAIVLAALAKLGQENQARNFERLAAWNKRQVQRLERKAKRAIQS*
Ga0079220_110711142	3300006806	Agricultural Soil	MSSITSERRPQVPGRDDRAAARLTSLALLGHMLRSRGFYERVVFAAVVLVALAKLGQENRAKSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0075425_1002556702	3300006854	Populus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRHDRATARLTSLALLGHMLRSRSFYERVTFAAIVLVALAKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0075424_1025788051	3300006904	Populus Rhizosphere	MSSITSGRRPQVPGRDDRTAERLTRLALLGHMLRSRGFYERVVFAAIVLAALGKLGQENQARNFARLAAWNKRQIERLERKAKDAITP
Ga0075436_1003454002	3300006914	Populus Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTRLALLGHMLRSRSFYERVAFAVIVLAAAAKLGQENQAKSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0105250_105797152	3300009092	Switchgrass Rhizosphere	MSPTTSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQENQARSFARLAAWNKRQVQRLERKAKSAITPSGS*
Ga0105240_102033052	3300009093	Corn Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0105245_118215861	3300009098	Miscanthus Rhizosphere	MSSITSGGTPRSGQELAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0105245_120194341	3300009098	Miscanthus Rhizosphere	MSPTTSGETPRSEQDPRGRDDRAAARLTSLALLGHMLRSRSFYERVAFAVIVLAALAKLGQENQARSLARLAAWNRRQVQRLERKAKSAITPSGS*
Ga0105245_122201461	3300009098	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0105247_105560031	3300009101	Switchgrass Rhizosphere	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQEHQARSFARLAAWNKRQVQRLERKAKRAIQS*
Ga0105238_107917502	3300009551	Corn Rhizosphere	GRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0126318_101691292	3300010152	Soil	MSSITSGGTPRSGQDPAGSQGAGRRPEVPGREGRAAARLTSLALLVHMLRSRSFYERVAFAAIVVTAAAKLGQENQARNFERLAAWNKRQIERLERKAKDAITPSGS*
Ga0126318_108951561	3300010152	Soil	MSSIISERRPQVPGRDNRAGMRLTRLALLGHMLRSRGFYERVVFAAIVLVALGKLGQENQARNFARLAAWNKRQLQFLERKAKGAAHS*
Ga0134128_118899011	3300010373	Terrestrial Soil	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLLSRSFYERVAFAAIVLAALAKLGQENQARSFARLAAWNKRQIER
Ga0105239_131138232	3300010375	Corn Rhizosphere	PGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0137364_109067991	3300012198	Vadose Zone Soil	MSSITSEGRPQVPRRDDRAGIRLTRLALLGHMLRSRGFYERVAFAGIVLVALAKLGQENQTKNLARLAAWNKRQIQRLERKAKGAVTPSGS*
Ga0137382_104703631	3300012200	Vadose Zone Soil	MSSITSEGRPQVPRRDDRAGMRLTRLALLGHMLRSRGFYERVAFAGIVLVALAKLGQENQTKNLARLAAWNKRQIQRLERKAKGAVTPSGS*
Ga0137382_113263281	3300012200	Vadose Zone Soil	MSSITSGETPRSGQDPRGRDDRAATRLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSFARLAAWNKRQIERLEHKAKDAITPSGS*
Ga0164301_104255811	3300012960	Soil	GRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS*
Ga0164301_107589131	3300012960	Soil	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQVQRLERKAKSAITPSGS*
Ga0164308_100120023	3300012985	Soil	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSLARLAAWNKRQIERLERKAKDAITPSGS*
Ga0157369_125331731	3300013105	Corn Rhizosphere	PRDEGEGSPAMSSITSGGTPRSGQDLAGSQDAGRRPQVPSRDGRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0157372_124486841	3300013307	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDARRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0157380_122888231	3300014326	Switchgrass Rhizosphere	MSPTTSGETPRSEQDPRGRDDRAAARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS*
Ga0182008_105189631	3300014497	Rhizosphere	MSSITSEGRPQVPGRHNRAGMRLTRLALLGHMLRSRSFYERVAFAAIVLVALGKLGQENQAKNLARLAAWNKRQVQRLERKAKGAITPSGS*
Ga0157379_104869571	3300014968	Switchgrass Rhizosphere	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKGAVHS*
Ga0132256_1034910671	3300015372	Arabidopsis Rhizosphere	DAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS*
Ga0163161_106898121	3300017792	Switchgrass Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS
Ga0187809_103492722	3300017937	Freshwater Sediment	SGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAGLGKENQAKNFERLAAWNKRQIERLERKAKDAITPGS
Ga0066655_113941921	3300018431	Grasslands Soil	MSSITSKGRPQVPGRDNRAGMRLTRLALLGHMLRSRTFYERMAFAGIVLAAMAKLSQENQARNVARLAAWNKRQVERLERKAKDLAHP
Ga0066667_113425591	3300018433	Grasslands Soil	MSSIISERRPQVPGRDNRAGMRLTRLALLGHMLRSRTFYERVAFAAIVVTAAAKLGQENQAKSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0197907_103801372	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS
Ga0197907_106938212	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKSAITPSGS
Ga0182009_101597152	3300021445	Soil	MSSITSEGRPQVPGRHNRAGMRLTRLALLGHMLRSRSFYERVAFAAIVLVALGKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPSGS
Ga0247661_10610792	3300024254	Soil	ITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0247666_10262452	3300024323	Soil	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLE
Ga0247678_10327841	3300024325	Soil	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKR
Ga0247668_11106182	3300024331	Soil	PGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0207653_100081471	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS
Ga0207692_100953392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207688_100858142	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQELAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQVQRLERKAKSAITPSGS
Ga0207647_100383902	3300025904	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207685_102544982	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS
Ga0207643_100140332	3300025908	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRAGMRLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0207705_112428761	3300025909	Corn Rhizosphere	DPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS
Ga0207695_106148491	3300025913	Corn Rhizosphere	QVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207663_102994532	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207663_106357463	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTTSGETPRSGQDPRGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0207662_103859201	3300025918	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQVQRLERKAKRAIQS
Ga0207649_101406242	3300025920	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQVQRLERKAKSAITPSGS
Ga0207694_116031492	3300025924	Corn Rhizosphere	MSPTTSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQEHQARSFARLAAWNKRQVQRLERKAKGAVHS
Ga0207659_103181192	3300025926	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALAKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207664_117114231	3300025929	Agricultural Soil	AMSSITSGGTPRSGQDLAGSQDAGRRPQVPSRDGRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207706_103394642	3300025933	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207686_102128951	3300025934	Miscanthus Rhizosphere	MSSITSGGTPRSGQELAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207709_108265992	3300025935	Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSIARLAAWNKRQVQRLERKAKGAVHS
Ga0207670_102509672	3300025936	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0207669_107120831	3300025937	Miscanthus Rhizosphere	AGRRPQVPGRDDRATARLTTLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS
Ga0207691_103312011	3300025940	Miscanthus Rhizosphere	MSSITSGGTPRSGQELAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGQENQARSLARLAAWNKRQV
Ga0207651_110500701	3300025960	Switchgrass Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQ
Ga0207677_112804792	3300026023	Miscanthus Rhizosphere	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKRAISVLRTRR
Ga0207703_120712611	3300026035	Switchgrass Rhizosphere	SGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207639_116595331	3300026041	Corn Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQVQRLERKAKSAITPSGS
Ga0207708_101671562	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERK
Ga0207702_100785122	3300026078	Corn Rhizosphere	TPRSGQDLAGSQDAGRRPQVPGRDDRATARLTSLALLGHMLRSRSFYERVVFAAIVLVALGKLGRENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0207698_124445591	3300026142	Corn Rhizosphere	MSSITSERRPQVPGRDDRAGMRLTSLALLSHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITP
Ga0209111_10221672	3300027058	Forest Soil	MSSITSGGTPRSGQDLAGSQDAGRRPQVPGRDDRATARLTTLALLGHMLRSRSFYERVVFAAIVLAALAKLGQENQAKNFARLAAWNKRQIERLERKAKDAITPGS
Ga0209073_100245331	3300027765	Agricultural Soil	MSSITSGEMPRSGQDSRGRDNRAAARLTRLALLGHMLRSRGFYERVAFVAIVLAALAKLGQENQARNFERLAAWNKRQVQRLERKAKRAIQS
Ga0209073_102947561	3300027765	Agricultural Soil	MSSITSERRPQVPGRDDRAAARLTSLALLGHMLRSRGFYERVVFAAVVLVALAKLGQENRAKSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0209074_102460342	3300027787	Agricultural Soil	MNSITSGGTPRSGKDLAGSQSAGRRPQVPGRDDRAGMRLTRLALLGHMLRSRSFYERVAFAAIVLVAAAKLGQENQAKSLARLAAWNKRQIERLERKAKDAITPGS
Ga0209112_100903481	3300027817	Forest Soil	MSSITSGGTPGSGQDLAGSQDAGRRPQVPGRDDRATARLTTLALLGHMLRSRSFYERVAFAAIVLAALAKLGKENQARSFARLAAWNKRQIERLERKAKDAITPGS
Ga0307500_100237362	3300031198	Soil	SSITSDGTPRSGQDLAGSQDAGRRPQVSGRDDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0310813_101997492	3300031716	Soil	MSSITSGRRPQVPGRDDRAGMRLTRLALLGHMLRSRGFYERVVFAAIVLVALGKLGQENQARNFARLAAWNKRQVQRLERKAKAAVTPSGS
Ga0307468_1008479082	3300031740	Hardwood Forest Soil	MSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKRAIQS
Ga0310900_106709982	3300031908	Soil	DDRATARLTSLALLGHMLRSRSFYERVAFAAIVLAALAKLGRENQARSFARLAAWNKRQIERLERKAKDAITPSGS
Ga0308174_117624891	3300031939	Soil	MSSITSGGTPRSGQDPAGSQGAGRRPQVPGRDDRTAARLTSLALLGHMLRSRSFYERVAFAAIVVVAAAKLGQENQAKNFARLAAWNKRQIERLEHKAKDAITPSGS
Ga0307470_115921161	3300032174	Hardwood Forest Soil	DPRGRDDRTTARLTSLALLGHMLRSRGFYERVAFAVIVLAALAKLGQEHQARSFARLAAWNKRQVQRLERKAKGAVHS
Ga0307472_1007759961	3300032205	Hardwood Forest Soil	GMSSITSGETPRSGQDPRGRDDRTTARLTSLALLGHMLRSRVFYERVAFAAIVLAALAKLGQENRARSFARLAAWNKRQVQRLERKAKRAIQS
Ga0310812_101673531	3300032421	Soil	MSSITSGRRPQVPGRDDRTAERLTRLALLGHMLRSRSFYERVVFAAIVLVALGKLGQENQARNFARLAAWNKRQVQRLERKAKAAV
Ga0335072_101474812	3300032898	Soil	MSSITSGGTPRSGQDPAGSQGAGRRPQVPGRQDRAAARLTSLALLGHILRSRGFYERVVFAGIVVAAAAKLGHENQARSFERLAAWNKRQIERLERKAKDAITSSGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074107

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences