Metagenome / Metatranscriptome Family F074095

Basic Information
Family ID	F074095
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	48 residues
Representative Sequence	DGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS
Number of Associated Samples	109
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.83 %
% of genes near scaffold ends (potentially truncated)	86.67 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (98.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (31.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.88% β-sheet: 0.00% Coil/Unstructured: 67.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF09084	NMT1	35.00
PF13379	NMT1_2	5.00
PF00903	Glyoxalase	5.00
PF04365	BrnT_toxin	4.17
PF10282	Lactonase	3.33
PF05960	DUF885	2.50
PF04909	Amidohydro_2	1.67
PF01878	EVE	0.83
PF13676	TIR_2	0.83
PF00753	Lactamase_B	0.83
PF13964	Kelch_6	0.83
PF13358	DDE_3	0.83
PF08402	TOBE_2	0.83
PF03713	DUF305	0.83
PF13384	HTH_23	0.83
PF05199	GMC_oxred_C	0.83
PF09459	EB_dh	0.83
PF01546	Peptidase_M20	0.83
PF13482	RNase_H_2	0.83
PF01979	Amidohydro_1	0.83
PF14907	NTP_transf_5	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	35.00
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	35.00
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	4.17
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	2.50
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.83
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.83
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.83
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.33 %
Unclassified	root	N/A	1.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.17 %
Unclassified	root	N/A	1.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	35.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.67 %
Unclassified	root	N/A	1.67 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	35.00 %
Unclassified	root	N/A	1.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.33 %
Unclassified	root	N/A	1.67 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.33 %
Unclassified	root	N/A	1.67 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.33 %
Unclassified	root	N/A	1.67 %
unclassified Acidovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.33 %
Unclassified	root	N/A	1.67 %
Acidovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp.	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_87233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	988	Open in IMG/M
3300000789\|JGI1027J11758_11987151	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300000955\|JGI1027J12803_106446730	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300000956\|JGI10216J12902_111856878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → unclassified Acidovorax → Acidovorax sp.	2472	Open in IMG/M
3300002124\|C687J26631_10208767	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300002485\|C687J35088_10265681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	501	Open in IMG/M
3300004013\|Ga0055465_10009452	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300004114\|Ga0062593_103305176	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300004281\|Ga0066397_10015386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1061	Open in IMG/M
3300004463\|Ga0063356_102114249	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300004463\|Ga0063356_104331151	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300004480\|Ga0062592_101402107	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300004808\|Ga0062381_10026444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1521	Open in IMG/M
3300005329\|Ga0070683_101823647	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005330\|Ga0070690_101658032	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005333\|Ga0070677_10061465	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300005340\|Ga0070689_101872996	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005355\|Ga0070671_101511496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300005434\|Ga0070709_10301231	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005438\|Ga0070701_11150875	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005440\|Ga0070705_100883092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	718	Open in IMG/M
3300005457\|Ga0070662_101940028	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005458\|Ga0070681_10014728	All Organisms → cellular organisms → Bacteria	7775	Open in IMG/M
3300005530\|Ga0070679_102024416	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005545\|Ga0070695_100951726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	696	Open in IMG/M
3300005558\|Ga0066698_10073479	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300005829\|Ga0074479_10832445	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005841\|Ga0068863_102666508	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005887\|Ga0075292_1002984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2041	Open in IMG/M
3300005895\|Ga0075277_1081970	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006049\|Ga0075417_10628780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	548	Open in IMG/M
3300006049\|Ga0075417_10667004	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006163\|Ga0070715_10236044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	948	Open in IMG/M
3300006173\|Ga0070716_100220414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1274	Open in IMG/M
3300006173\|Ga0070716_101078993	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006237\|Ga0097621_102295537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300006853\|Ga0075420_100675593	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300006853\|Ga0075420_101275553	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006871\|Ga0075434_100642326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1080	Open in IMG/M
3300006876\|Ga0079217_10079732	Not Available	1413	Open in IMG/M
3300006880\|Ga0075429_100519727	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006880\|Ga0075429_100958746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	748	Open in IMG/M
3300006969\|Ga0075419_10400796	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300007004\|Ga0079218_10733034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	935	Open in IMG/M
3300007076\|Ga0075435_101360363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	622	Open in IMG/M
3300009137\|Ga0066709_100049722	All Organisms → cellular organisms → Bacteria → Proteobacteria	4718	Open in IMG/M
3300009157\|Ga0105092_10029572	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300009157\|Ga0105092_10663569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300009162\|Ga0075423_10693879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1074	Open in IMG/M
3300009162\|Ga0075423_11380304	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300009176\|Ga0105242_10641590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1031	Open in IMG/M
3300010040\|Ga0126308_10698997	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010047\|Ga0126382_12493749	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010358\|Ga0126370_10037831	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300010360\|Ga0126372_10704639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	986	Open in IMG/M
3300010362\|Ga0126377_12427671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	600	Open in IMG/M
3300010371\|Ga0134125_12774662	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010375\|Ga0105239_11979381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	676	Open in IMG/M
3300010391\|Ga0136847_10581636	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010398\|Ga0126383_13581032	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010399\|Ga0134127_10169122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2005	Open in IMG/M
3300010399\|Ga0134127_12767654	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300011412\|Ga0137424_1092049	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300011431\|Ga0137438_1140572	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012171\|Ga0137342_1110253	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012350\|Ga0137372_10154169	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300012360\|Ga0137375_10156482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2218	Open in IMG/M
3300012510\|Ga0157316_1002150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1314	Open in IMG/M
3300012582\|Ga0137358_10823213	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012929\|Ga0137404_11069358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	739	Open in IMG/M
3300012930\|Ga0137407_10059974	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300012948\|Ga0126375_10013003	All Organisms → cellular organisms → Bacteria	3612	Open in IMG/M
3300012951\|Ga0164300_10709443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300012958\|Ga0164299_11010293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300012964\|Ga0153916_11139325	Not Available	859	Open in IMG/M
3300012964\|Ga0153916_12398876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300013306\|Ga0163162_10560744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1270	Open in IMG/M
3300014270\|Ga0075325_1004805	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300014311\|Ga0075322_1089332	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300014314\|Ga0075316_1082107	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300014885\|Ga0180063_1163041	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300016371\|Ga0182034_10412289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1111	Open in IMG/M
3300017659\|Ga0134083_10032695	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300018063\|Ga0184637_10035334	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300018075\|Ga0184632_10076255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1462	Open in IMG/M
3300018422\|Ga0190265_10266874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1767	Open in IMG/M
3300018422\|Ga0190265_12626485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300018429\|Ga0190272_11188015	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300018431\|Ga0066655_11389433	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300019356\|Ga0173481_10494589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	621	Open in IMG/M
3300019377\|Ga0190264_10981760	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300020061\|Ga0193716_1078586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1465	Open in IMG/M
3300021063\|Ga0206227_1090753	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300021859\|Ga0210334_10023504	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300024056\|Ga0124853_1305086	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300024056\|Ga0124853_1364764	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300025311\|Ga0209343_10195211	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300025324\|Ga0209640_10961464	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300025903\|Ga0207680_10552427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	822	Open in IMG/M
3300025905\|Ga0207685_10348978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	745	Open in IMG/M
3300025930\|Ga0207701_10135113	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300025931\|Ga0207644_11370392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300025961\|Ga0207712_10213957	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300025988\|Ga0208141_1013446	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300026020\|Ga0208531_1002978	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300026051\|Ga0208911_1003575	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300026088\|Ga0207641_12487069	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026142\|Ga0207698_10958804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	865	Open in IMG/M
3300027682\|Ga0209971_1017897	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300027880\|Ga0209481_10457662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	657	Open in IMG/M
3300028145\|Ga0247663_1021099	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300031716\|Ga0310813_11618043	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300031912\|Ga0306921_11156398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	864	Open in IMG/M
3300031942\|Ga0310916_10448361	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1099	Open in IMG/M
3300032205\|Ga0307472_101543942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	650	Open in IMG/M
3300032782\|Ga0335082_10023708	All Organisms → cellular organisms → Bacteria	6577	Open in IMG/M
3300033004\|Ga0335084_10560564	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300033289\|Ga0310914_11673355	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300033486\|Ga0316624_10091820	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300033513\|Ga0316628_100086953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3444	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.83%
Host-Associated	Host-Associated	24.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.83%
Plants	Host-Associated → Plants	24.17%
Aquatic	Environmental → Aquatic	15.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Freshwater	Environmental → Aquatic → Freshwater	7.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Sediment	Environmental → Aquatic → Sediment	5.83%
Marine	Environmental → Aquatic → Marine	1.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.33%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.83%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002485	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01282330	2199352025	Soil	PTLEGTKLILENFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY
JGI1027J11758_119871511	3300000789	Soil	NFGKEYPDAPRRDPKEFVDGSMIDRLKQERFAEGLKQ*
JGI1027J12803_1064467301	3300000955	Soil	DYPAPTLEGIKLILENFGKEYPDAPRRDPKEFVDGSMIDRLKQERFAEGLKQ*
JGI10216J12902_1118568783	3300000956	Soil	FVASLMPDYIAPTFDGIKLILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKF*
C687J26631_102087671	3300002124	Soil	GKEYPDAPRRDAKEFVDGSLSERLKQERFVENLKY*
C687J35088_102656811	3300002485	Soil	TLDGLKVILENFGKEYPDAPRRDPKEFVDGSISERLKQERFVESLKY*
Ga0055465_100094521	3300004013	Natural And Restored Wetlands	ILENFGKEYPDAPKRDPREFVDGSIIERLKQEKFVENLKF*
Ga0062593_1033051762	3300004114	Soil	DFVASLMPDYMAPTYDGIKVILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKF
Ga0066397_100153861	3300004281	Tropical Forest Soil	DFVSSLIPDYPAPTLDGIRLILENFGKEYPDAPRRDPKEFVDGSIIERLKQERFAEGLKQ
Ga0063356_1021142492	3300004463	Arabidopsis Thaliana Rhizosphere	PDYIAPTFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKY*
Ga0063356_1043311511	3300004463	Arabidopsis Thaliana Rhizosphere	PDYIAPTFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKF*
Ga0062592_1014021072	3300004480	Soil	TFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKY*
Ga0062381_100264441	3300004808	Wetland Sediment	PDYIAPTFDGIKLILENFGKEYPDAPKRDPKDFADGSIIERLKQEKFAEGLRF*
Ga0070683_1018236472	3300005329	Corn Rhizosphere	SLMPDYIAPTLDGIKVILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS*
Ga0070690_1016580321	3300005330	Switchgrass Rhizosphere	LMPDYIAPTLEGTKLILENFGKEYPDAPKRDPKEFVDGSIIDRLKNERFVEGLKY*
Ga0070677_100614653	3300005333	Miscanthus Rhizosphere	APTLDGIKLILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS*
Ga0070689_1018729962	3300005340	Switchgrass Rhizosphere	DGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS*
Ga0070671_1015114962	3300005355	Switchgrass Rhizosphere	PTLEGIKVILDNFGKEYPDAPRRDPKEFVDGTIIERLKQERFAENLK*
Ga0070709_103012311	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LENFGKEYPDALRRDPKEFVDGSFIDRLKQERFVETLKQ*
Ga0070701_111508752	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	YIAPTFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKS*
Ga0070705_1008830922	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KLILENFGKEYPDAPRRDPKEFIDGSIIERLKNERFVEGLKS*
Ga0070662_1019400282	3300005457	Corn Rhizosphere	GTKLILENFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY*
Ga0070681_100147288	3300005458	Corn Rhizosphere	FVASLMPDYIAPTLDGIKVILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS*
Ga0070679_1020244162	3300005530	Corn Rhizosphere	MPDYIAPTLDGIKLILENFGKEYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKY*
Ga0070695_1009517262	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AALMPDYIAPTLDGIKLILENFGKEYPDAPRRDPKEFVDGSITDRLKNERFVEGLKY*
Ga0066698_100734793	3300005558	Soil	MPDYIAPTIEGTKLILENFGKQYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKS*
Ga0074479_108324451	3300005829	Sediment (Intertidal)	DGIKLILENFGKEYPDAPRRDPKEFVDGSLIERLKQEKFVESLKF*
Ga0068863_1026665082	3300005841	Switchgrass Rhizosphere	DGIKVILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS*
Ga0075292_10029843	3300005887	Rice Paddy Soil	FVSSLMPDYISPTLDGIKVILENFGKEYPDAPKRDPREFVDGSIIERLKQEKFVENLKF*
Ga0075277_10819702	3300005895	Rice Paddy Soil	KVILENFGKEYPDAPRRDPKEFVDGSLIDRLKQEKFVEGLRF*
Ga0075417_106287801	3300006049	Populus Rhizosphere	PDYIVPTLDGIKLILENFGKEYPDAARRDPKEFIDGSLIERLRQEKFVEGLKS*
Ga0075417_106670041	3300006049	Populus Rhizosphere	RLILENFGKEYPDAPRRDPKEFVDGSIIERLKQERFAEGLKQ*
Ga0070715_102360441	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LDGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS*
Ga0070716_1002204142	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DYPAPTLDGIRLILENFGKEYPDAPRRDPKEFVDGSIIERLKQERFAEGLKQ*
Ga0070716_1010789931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DFVASLMPDYIAPTLDGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS
Ga0097621_1022955371	3300006237	Miscanthus Rhizosphere	TLEGIKVILDNFGKEYPDAPRRDPKEFVDGTIIERLKQERFAENLK*
Ga0075420_1006755933	3300006853	Populus Rhizosphere	SLMPDYITPTFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKF*
Ga0075420_1012755531	3300006853	Populus Rhizosphere	TFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKF*
Ga0075434_1006423261	3300006871	Populus Rhizosphere	EGTKLILENFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY*
Ga0079217_100797323	3300006876	Agricultural Soil	ENFGKEYPDAPKRDPKEFADSSIMDRLKQEKFVENLKF*
Ga0075429_1005197273	3300006880	Populus Rhizosphere	SLMPDYIAPTLDGIKLILENFGKEYPDAPKREPKEFVDGSLMERLKQEKFVEGLKY*
Ga0075429_1009587461	3300006880	Populus Rhizosphere	ENFGKEYPEAPRRDPKEFIDGSPIERLKQEKFVEGLKY*
Ga0075419_104007961	3300006969	Populus Rhizosphere	IAPTLDGIKLILENFGKEYPDAPKREPKEFVDGSLMERLKQEKFVEGLKY*
Ga0079218_107330341	3300007004	Agricultural Soil	ENFGKEYPDAPKRDPKEFADSSIMDRLKQEKFVENLRF*
Ga0075435_1013603631	3300007076	Populus Rhizosphere	DGIKVILENFGKEYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKY*
Ga0066709_1000497223	3300009137	Grasslands Soil	MPDYIAPTIEGTRLILENFGKEYPDATRRDPKEFVDGSLIERLKQEKFAEGLKY*
Ga0105092_100295724	3300009157	Freshwater Sediment	IRLILENFGKEYPDAPRRDPKEFVDGSIIDRLKQERFVESLKF*
Ga0105092_106635692	3300009157	Freshwater Sediment	GKEYPDAPRRDPKEFVDGSIIERLKQERFAEGLKQ*
Ga0075423_106938792	3300009162	Populus Rhizosphere	VASLMPDYIAPTLDGIKLILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS*
Ga0075423_113803041	3300009162	Populus Rhizosphere	PTFDGIKLILENFGKEYPDAAKRDPKEFADGSLIERLKQEKFAEGLKF*
Ga0105242_106415901	3300009176	Miscanthus Rhizosphere	LENFGKEYPDAPKRDPKEFVDSSIMERLKSERFVEGLKY*
Ga0126308_106989971	3300010040	Serpentine Soil	ENFGKEYPDAPRRDPKEFVDSSIIDRLKQERFAESLKF*
Ga0126382_124937492	3300010047	Tropical Forest Soil	RLILENFGKEYPGAPRRDPKEFVDGSIIERLKQERFVEGLKQ*
Ga0126370_100378311	3300010358	Tropical Forest Soil	ILENFGKEYPDAPRRDPKEFVDGSIIERLKQERFAQGLKQ*
Ga0126372_107046391	3300010360	Tropical Forest Soil	LENFGKEYPDAPRRDPKEFVDGSFIDRLEQERFAEGLKQ*
Ga0126377_124276712	3300010362	Tropical Forest Soil	LENFGKEYPDAPRRDPKEFVDGSIIDRLKQERFVGGLKQ*
Ga0134125_127746622	3300010371	Terrestrial Soil	VASLMPDYIAPTLDGIKLILENFGKEYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKY*
Ga0105239_119793811	3300010375	Corn Rhizosphere	NFGKEYPDAPKRDPKEFVDSAIMDRLKNERFVEGLKY*
Ga0136847_105816361	3300010391	Freshwater Sediment	LILENFGKEYPDAPRRDPKEFADGSIIERLKEEKFVEGLKF*
Ga0126383_135810321	3300010398	Tropical Forest Soil	TLEGIKLILENFGREYPDAPRRDPKEFVDGSFIDRLKQERFAEGLKQ*
Ga0134127_101691221	3300010399	Terrestrial Soil	VLTNPKPRRDPKEFVDSSIMDWLKQEKFVEGLKF*
Ga0134127_127676542	3300010399	Terrestrial Soil	PDYISPTLDGIKLILENFGKEYPDAPRRDPKEFADGSIMDRLKQEKFVESLKF*
Ga0137424_10920492	3300011412	Soil	YMAPTLEGLKVILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKF*
Ga0137438_11405722	3300011431	Soil	DGLKVILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLRF*
Ga0137342_11102531	3300012171	Soil	PDYPAPTLDGIRLILENFGKEYPDAPRRDPKEFVDGSIIDRLKQERFAEGLKQ*
Ga0137372_101541693	3300012350	Vadose Zone Soil	MPDYIAPTIEGTNLILENFGKEYPDAPRHDPKEFVDGSIIDRLKNERFVEGLKS*
Ga0137375_101564825	3300012360	Vadose Zone Soil	MPDYIAPTLEGIKLILENFGKEYPDAPKRDPKEFVDGSLIERLKQEKFVEGLKY*
Ga0157316_10021501	3300012510	Arabidopsis Rhizosphere	NFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY*
Ga0137358_108232131	3300012582	Vadose Zone Soil	SLMPDYIAPTLDGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKQEKFVEGLRF*
Ga0137404_110693582	3300012929	Vadose Zone Soil	PDYITPTLEGTKLILENFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY*
Ga0137407_100599744	3300012930	Vadose Zone Soil	MPDYIAPTIEGTKLILENFGKEYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKS*
Ga0126375_100130031	3300012948	Tropical Forest Soil	APTLDGIRLILENFGKEYPDAPRRDPKEFVDGSIIERLKQERFAQGLKQ*
Ga0164300_107094432	3300012951	Soil	LMPDYIAPTLEGIKVILDNFGKEYPDAPRRDPKEFVDGTIIERLKQERFAENLK*
Ga0164299_110102932	3300012958	Soil	ALMPDYIAPTLEGIKVILDNFGKEYPDAPRRDPKEFVDGTIIERLKQERFAENLK*
Ga0153916_111393252	3300012964	Freshwater Wetlands	LILEKFGKYPDASRRVPKEFIDSSFIDRLKQERFAEGLKQ*
Ga0153916_123988761	3300012964	Freshwater Wetlands	DGLKLILENFGKEYPDAPRRDPKEFIDGSISERLKQERFVESLKY*
Ga0163162_105607442	3300013306	Switchgrass Rhizosphere	PDYIAPTLEGTKLILENFGKEYPDAPKRDPKEFVDGSIIDRLKNERFVEGLKY*
Ga0075325_10048054	3300014270	Natural And Restored Wetlands	MPDYPAPNLDGIKVILENFGKEYPDALRRDPKEFVDGSIIERLKQEKFAEGLKF*
Ga0075322_10893321	3300014311	Natural And Restored Wetlands	APNLDGIKVILENFGKEYPEAPKRDPKEFVDGSLIDRLKQEKFVEGLKF*
Ga0075316_10821072	3300014314	Natural And Restored Wetlands	SPTLDGIKVILENFGKEYPDAPKRDPREFVDGSIIERLKQEKFVENLKF*
Ga0180063_11630411	3300014885	Soil	LDGIKLILENFGKEYPDAPRRDPKEFVDGSLIERLKQERFVESLKY*
Ga0182034_104122892	3300016371	Soil	DGIRLILDNFGKEYPDAPRRDPREFVDGSIIERLKQERFAEGLKQ
Ga0134083_100326951	3300017659	Grasslands Soil	MPDYIAPTIEGTKLILENFGKEYPDAPRRDAKEFVDGSIIDRLKNERFVEGLKS
Ga0184637_100353342	3300018063	Groundwater Sediment	LESLNRDSIRLILENFGKEYPDASRRDPKEFADGSFIERLKQERFVESLKQ
Ga0184632_100762551	3300018075	Groundwater Sediment	FDFVSSLMPDYIAPTIEGTRLILENFGKEYPDAPKRDPKEFVDGSIIDRLKNERFVEGLK
Ga0190265_102668743	3300018422	Soil	LIKKYPDARRRDPKEFADSSIMDRLKQEKFVEGLKF
Ga0190265_126264852	3300018422	Soil	GKEYPDAPRRDPKEFVDTSIMDRLKQEKFAEGLKF
Ga0190272_111880151	3300018429	Soil	MPDYISPTLDGIKLILENFSKEYPDAPRRDPKEFVDSSIMDRLKQEKFVEGLKF
Ga0066655_113894331	3300018431	Grasslands Soil	KLSMEKFGKEYPDAPRRDPKEFVDGSIIDRLKNERFVEGLKS
Ga0173481_104945892	3300019356	Soil	LDGVKLILENFGKEYPDAAKRDPKEFVDSSIIERLKNERFVEGLKS
Ga0190264_109817602	3300019377	Soil	LMPDYISPTLDGIKLILENFGKEYPDAPKRDPKEFADGSIMDRLKQEKFVEGLKF
Ga0193716_10785861	3300020061	Soil	SLMPDYITRTIEGTKLILENFGKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY
Ga0206227_10907531	3300021063	Deep Subsurface Sediment	YIAPTLDGLKLILENFGKEYPDAPRRDPKEFADGSIIERLKQEKFAESLRF
Ga0210334_100235042	3300021859	Estuarine	ATKLILENCGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKY
Ga0124853_13050865	3300024056	Freshwater Wetlands	MAPTYDGLKIILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKF
Ga0124853_13647643	3300024056	Freshwater Wetlands	MPDYMAPTFDGIKVILENFGKEYPDAPKRDPKEFADGSIIERLKQEKFAEGLKF
Ga0209343_101952112	3300025311	Groundwater	DGIKLILENFGKEYPDAPRRDPKEFIDGSISERLKQERFVESLKY
Ga0209640_109614642	3300025324	Soil	DFVSALMPDYIAPTLDGIKVILENFGKEYPDAPRRDPKEFADGSIIERLKQEKFAEGLKF
Ga0207680_105524271	3300025903	Switchgrass Rhizosphere	TLDGIKVILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS
Ga0207685_103489781	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LDGIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS
Ga0207701_101351131	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DYIAPTFDGIKLILENFGKEYPDAAKRDPKEFADGSIIERLKQEKFAEGLKS
Ga0207644_113703921	3300025931	Switchgrass Rhizosphere	PTLEGIKVILDNFGKEYPDAPRRDPKEFVDGTIIERLKQERFAENLK
Ga0207712_102139573	3300025961	Switchgrass Rhizosphere	GKEYPDAPKRDPKEFVDSSIMDRLKNERFVEGLKY
Ga0208141_10134462	3300025988	Rice Paddy Soil	LENFGKEYPDAPRRDPKEFVDGSLIDRLKQEKFVEGLRF
Ga0208531_10029781	3300026020	Rice Paddy Soil	GIKVILENFGKEYPDAPKRDPREFVDGSIIERLKQEKFVENLKF
Ga0208911_10035752	3300026051	Natural And Restored Wetlands	MPDYPAPNLDGIKVILENFGKEYPDALRRDPKEFVDGSIIERLKQEKFAEGLKF
Ga0207641_124870691	3300026088	Switchgrass Rhizosphere	DGIKVILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS
Ga0207698_109588042	3300026142	Corn Rhizosphere	YIAPTLDGIKLILENFGKEYPDAPKRDPKEFVDSSIIERLKNERFVEGLKS
Ga0209971_10178971	3300027682	Arabidopsis Thaliana Rhizosphere	GKEYPDAPKRDPREFVDGSIIERLKQEKFVENLKF
Ga0209481_104576621	3300027880	Populus Rhizosphere	KLILENFGKEYPDAPKREPKEFVDGSLMERLKQEKFVEGLKY
Ga0247663_10210991	3300028145	Soil	ALMPDYMAPTLDGLKVILENFGKEYPDAPKRDPKEFADSSIIERLKQEKFVEGLKF
Ga0310813_116180431	3300031716	Soil	GIKLILENFGKEYPDAPRRDPKEFVDGSIIERLKNERFVEGLKS
Ga0306921_111563981	3300031912	Soil	FVALLMPDYIAPTLDGIKLILENFGKEYPDAPKRDPKEFVDGSIIERLKSERFVEGLKS
Ga0310916_104483611	3300031942	Soil	SLIPDYIAPTLDGIKLILENFGKEYPDAPKRDPNEFVDGSIIERLKSERFVEGLKS
Ga0307472_1015439422	3300032205	Hardwood Forest Soil	FGKEYPDAPKRDPKEFVDGSIMDRLKNERFVEGLKY
Ga0335082_100237081	3300032782	Soil	FGKEYPDAPRRDPKEFVDSSFIDRLKQERFVEGLR
Ga0335084_105605642	3300033004	Soil	GIKLILENFGKEYPDAPRRDPKEFVDSSFIDRLKQERFVEGLKQ
Ga0310914_116733551	3300033289	Soil	NFGKEYPDAPKRDPNEFVDGSIIERLKSERFVEGLKS
Ga0316624_100918201	3300033486	Soil	GIKVILENVGKEYPDAPRRDPKEFVDGSLIDRLKQEKFVEGLKF
Ga0316628_1000869532	3300033513	Soil	MLENFGKEYQDAPHCDPKEFIDGSYIERLKSERLVENLKF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074095

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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