Metagenome / Metatranscriptome Family F074073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074073
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	64 residues
Representative Sequence	AKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Number of Associated Samples	100
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.42 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.833 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.44% β-sheet: 12.22% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.74.1.0: automated matches	d2irpa_	2irp	0.58354
c.74.1.1: AraD-like aldolase/epimerase	d1e48p_	1e48	0.5819
c.62.1.1: Integrin A (or I) domain	d1ijba_	1ijb	0.56794
c.74.1.1: AraD-like aldolase/epimerase	d1pvta_	1pvt	0.56699
d.17.4.0: automated matches	d6hnma_	6hnm	0.5667

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF04248	NTP_transf_9	40.83
PF00196	GerE	3.33
PF13560	HTH_31	1.67
PF13193	AMP-binding_C	1.67
PF08281	Sigma70_r4_2	1.67
PF00248	Aldo_ket_red	0.83
PF00072	Response_reg	0.83
PF13374	TPR_10	0.83
PF12697	Abhydrolase_6	0.83
PF02720	DUF222	0.83
PF02657	SufE	0.83
PF02909	TetR_C_1	0.83
PF01717	Meth_synt_2	0.83
PF00723	Glyco_hydro_15	0.83
PF05721	PhyH	0.83
PF00144	Beta-lactamase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	40.83
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.83
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.83
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.83
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.83 %
Unclassified	root	N/A	4.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.33 %
Unclassified	root	N/A	4.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.50 %
Unclassified	root	N/A	4.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.00 %
Unclassified	root	N/A	4.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.83 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.83 %

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	24.17 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	23.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.50 %
Unclassified	root	N/A	4.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	24.17 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	22.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.50 %
Unclassified	root	N/A	4.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Reticulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae	0.83 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	24.17 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	22.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.50 %
Unclassified	root	N/A	4.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Reticulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter	0.83 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomadura macrotermitis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	22.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.50 %
Micromonospora ureilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	16.67 %
Unclassified	root	N/A	4.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.83 %
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig28385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
2189573004\|GZGWRS402JTY5O	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	517	Open in IMG/M
3300003505\|JGIcombinedJ51221_10213968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	782	Open in IMG/M
3300005337\|Ga0070682_101898746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	522	Open in IMG/M
3300005338\|Ga0068868_100780548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	860	Open in IMG/M
3300005341\|Ga0070691_10321100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	852	Open in IMG/M
3300005435\|Ga0070714_102011533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	563	Open in IMG/M
3300005435\|Ga0070714_102173474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	540	Open in IMG/M
3300005435\|Ga0070714_102322601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	521	Open in IMG/M
3300005436\|Ga0070713_100588168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1056	Open in IMG/M
3300005436\|Ga0070713_100981318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	814	Open in IMG/M
3300005436\|Ga0070713_102317769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	520	Open in IMG/M
3300005437\|Ga0070710_10192438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	1283	Open in IMG/M
3300005439\|Ga0070711_100605386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300005439\|Ga0070711_100809691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300005439\|Ga0070711_101010865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	713	Open in IMG/M
3300005454\|Ga0066687_10721316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300005458\|Ga0070681_10321656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300005468\|Ga0070707_101056644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	778	Open in IMG/M
3300005536\|Ga0070697_100566502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	997	Open in IMG/M
3300005552\|Ga0066701_10775447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	572	Open in IMG/M
3300005563\|Ga0068855_102397664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	527	Open in IMG/M
3300005577\|Ga0068857_101845600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	592	Open in IMG/M
3300005615\|Ga0070702_101226981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	606	Open in IMG/M
3300005719\|Ga0068861_101393433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	684	Open in IMG/M
3300005843\|Ga0068860_102626450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300006028\|Ga0070717_10175123	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300006163\|Ga0070715_10627119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	633	Open in IMG/M
3300006173\|Ga0070716_101225622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	604	Open in IMG/M
3300006175\|Ga0070712_100396217	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300006175\|Ga0070712_101454771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300006175\|Ga0070712_101580522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	573	Open in IMG/M
3300006176\|Ga0070765_100661022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	987	Open in IMG/M
3300006755\|Ga0079222_11331842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	657	Open in IMG/M
3300006755\|Ga0079222_12192893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	549	Open in IMG/M
3300006755\|Ga0079222_12362177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	532	Open in IMG/M
3300006804\|Ga0079221_10374408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	871	Open in IMG/M
3300006804\|Ga0079221_10543493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	767	Open in IMG/M
3300006804\|Ga0079221_11578338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	530	Open in IMG/M
3300006804\|Ga0079221_11621331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300006854\|Ga0075425_100512712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1381	Open in IMG/M
3300006954\|Ga0079219_10181124	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300009098\|Ga0105245_11039530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300009143\|Ga0099792_10354069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	887	Open in IMG/M
3300009553\|Ga0105249_10556782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198	Open in IMG/M
3300009683\|Ga0116224_10317721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	741	Open in IMG/M
3300010359\|Ga0126376_11645144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	675	Open in IMG/M
3300010373\|Ga0134128_12430371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300010376\|Ga0126381_101949907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300010376\|Ga0126381_104442891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	542	Open in IMG/M
3300010396\|Ga0134126_12987937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	511	Open in IMG/M
3300010401\|Ga0134121_11088619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	791	Open in IMG/M
3300010876\|Ga0126361_11075133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2145	Open in IMG/M
3300012515\|Ga0157338_1057288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	576	Open in IMG/M
3300012924\|Ga0137413_10321781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	1088	Open in IMG/M
3300012986\|Ga0164304_10066043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2035	Open in IMG/M
3300012989\|Ga0164305_10054878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2354	Open in IMG/M
3300013105\|Ga0157369_11289354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	745	Open in IMG/M
3300013306\|Ga0163162_11261931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	839	Open in IMG/M
3300015374\|Ga0132255_105487909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	537	Open in IMG/M
3300017926\|Ga0187807_1054008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1246	Open in IMG/M
3300017973\|Ga0187780_10184499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	1452	Open in IMG/M
3300018037\|Ga0187883_10464630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300021171\|Ga0210405_10277100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1326	Open in IMG/M
3300021403\|Ga0210397_10218635	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300021404\|Ga0210389_11331874	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300021475\|Ga0210392_11066081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300021478\|Ga0210402_11863827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	527	Open in IMG/M
3300021479\|Ga0210410_11601773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	544	Open in IMG/M
3300021858\|Ga0213852_1225397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300021861\|Ga0213853_11300179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300024254\|Ga0247661_1084718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300024283\|Ga0247670_1006690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2169	Open in IMG/M
3300025898\|Ga0207692_10199593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1175	Open in IMG/M
3300025905\|Ga0207685_10461533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	662	Open in IMG/M
3300025911\|Ga0207654_10019266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3599	Open in IMG/M
3300025911\|Ga0207654_11057576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	591	Open in IMG/M
3300025916\|Ga0207663_10680170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	814	Open in IMG/M
3300025916\|Ga0207663_10925076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	698	Open in IMG/M
3300025916\|Ga0207663_11063163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	650	Open in IMG/M
3300025920\|Ga0207649_11046072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300025928\|Ga0207700_10033719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3666	Open in IMG/M
3300025939\|Ga0207665_10637465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300026078\|Ga0207702_10147836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2134	Open in IMG/M
3300026078\|Ga0207702_10669449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	1021	Open in IMG/M
3300026078\|Ga0207702_12514711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	501	Open in IMG/M
3300026864\|Ga0209621_1008309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	697	Open in IMG/M
3300027174\|Ga0207948_1045557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300027846\|Ga0209180_10064082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2049	Open in IMG/M
3300027903\|Ga0209488_10175547	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300029701\|Ga0222748_1087229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	590	Open in IMG/M
3300029999\|Ga0311339_10831436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300030399\|Ga0311353_11191787	Not Available	629	Open in IMG/M
3300030580\|Ga0311355_10323406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1540	Open in IMG/M
3300030677\|Ga0302317_10368067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300031231\|Ga0170824_113506724	Not Available	633	Open in IMG/M
3300031469\|Ga0170819_16314528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	551	Open in IMG/M
3300031572\|Ga0318515_10710895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	531	Open in IMG/M
3300031640\|Ga0318555_10701090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300031751\|Ga0318494_10298407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300031771\|Ga0318546_10336013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300031780\|Ga0318508_1223215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	541	Open in IMG/M
3300031823\|Ga0307478_11818196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macrotermitis	501	Open in IMG/M
3300031860\|Ga0318495_10293932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300031896\|Ga0318551_10667210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300031912\|Ga0306921_11270103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300031954\|Ga0306926_10262239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2141	Open in IMG/M
3300032052\|Ga0318506_10073148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1427	Open in IMG/M
3300032060\|Ga0318505_10447852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300032068\|Ga0318553_10210350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300032770\|Ga0335085_10398410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1598	Open in IMG/M
3300032892\|Ga0335081_10806121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1121	Open in IMG/M
3300032898\|Ga0335072_11244173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300032954\|Ga0335083_10326967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1336	Open in IMG/M
3300032954\|Ga0335083_10937196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	685	Open in IMG/M
3300032955\|Ga0335076_10184545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1992	Open in IMG/M
3300033134\|Ga0335073_11580413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.00%
Host-Associated	Host-Associated	15.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.67%
Plants	Host-Associated → Plants	15.00%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Freshwater	Environmental → Aquatic → Freshwater	3.33%
Peat	Environmental → Terrestrial → Peat	3.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.33%
Loam	Environmental → Terrestrial → Soil → Loam	27.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.50%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026864	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00113670	2166559006	Grass Soil	MLREQIAIAERYPDLRACLTDNVIFLAGGSRVLPMSTLRRGLTLEQADAVVAQLRNG
FG2_05856470	2189573004	Grass Soil	VPTVAAKQEAMLREQIAIAERHPDLRACLTDNVIFLAGGSRVLPMSTLRRGLTLEQADAAVAQLRNG
JGIcombinedJ51221_102139681	3300003505	Forest Soil	AARQQAMAGRQEAMLRDQIAIAERYPELRACLTDQVIFLAGGSRVLPMSSVTGGITLEQADALVAQLRNG*
Ga0070682_1018987461	3300005337	Corn Rhizosphere	AKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0068868_1007805482	3300005338	Miscanthus Rhizosphere	SAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070691_103211002	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0070714_1020115331	3300005435	Agricultural Soil	EAMARQEGMLREQIAIAERYPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG*
Ga0070714_1021734742	3300005435	Agricultural Soil	MLREQIAIAERYPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG*
Ga0070714_1023226011	3300005435	Agricultural Soil	PAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070713_1005881683	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070713_1009813182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AERYPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG*
Ga0070713_1023177691	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AAKQDAMLREQIAIAERYPDLRACLTDDVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070710_101924382	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070711_1006053862	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070711_1008096911	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QEGMLREQIEIAERYPDLRACMNDNVAFLAGGSRAVPMANLTGGFTMEQADALVAQLRNG
Ga0070711_1010108652	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0066687_107213162	3300005454	Soil	MPVAAKQEAAMREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070681_103216563	3300005458	Corn Rhizosphere	VVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADTVVAQLRNG*
Ga0070707_1010566441	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPAVSAKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070697_1005665021	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AMLREQIAIAERYPDLRACLTDDVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0066701_107754471	3300005552	Soil	AMAAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0068855_1023976641	3300005563	Corn Rhizosphere	AKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0068857_1018456002	3300005577	Corn Rhizosphere	GPAMAARQEAMARQEGVLREQIAIAERYPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG*
Ga0070702_1012269811	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	YEERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADTVVAQLRNG*
Ga0068861_1013934331	3300005719	Switchgrass Rhizosphere	SAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0068860_1026264502	3300005843	Switchgrass Rhizosphere	AMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070717_101751231	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KQDAMLREQIAIAERYPDLRACLTDNVVFLAGGTRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070715_106271192	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0070716_1012256221	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QEGMLREQIAIAERYPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG
Ga0070712_1003962171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0070712_1014547711	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLGQMAAGQEGMLREQIEIAERYPDLRACMNDNVAFLAGGSRAVPMANLTGGFTMEQADALVAQLRNG*
Ga0070712_1015805221	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GMLREQIAIAERYPDLRACLSDQVVFLAGGRRMLPMPRDLSGLTMAQADAIVAQLRAG*
Ga0070765_1006610221	3300006176	Soil	QEAMLREQIAIAERHPDLRACLTDQVIFLANGSRVLPMSSLSRGLTLEQADAMVAQLRNG
Ga0079222_113318422	3300006755	Agricultural Soil	AVSAKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0079222_121928931	3300006755	Agricultural Soil	QEAMARQEGMLREQIAIAERYPDLRACLSDRLVFLAGGRRTLPMPSDLSGITMAHADAIVAQLRNG*
Ga0079222_123621771	3300006755	Agricultural Soil	MLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0079221_103744082	3300006804	Agricultural Soil	REQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0079221_105434932	3300006804	Agricultural Soil	GPAMAARQEAMARQEGMLREQIAIAERYPDLRACLSDGLVFLAGGRRTVPIPRDLSGITMAQADAIVAQLRNG*
Ga0079221_115783381	3300006804	Agricultural Soil	MARQEGMLREQIAIAERHPDLRACLSDKLVFLAGGGRTVPMPSDLTGLTMAQADAIVAQLRNG*
Ga0079221_116213312	3300006804	Agricultural Soil	LREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAELRNG*
Ga0075425_1005127121	3300006854	Populus Rhizosphere	QEAMARQEGMLREQIAIAERYPDLRACLSDKLVFLAGGGRTVPMPSDLTGLTMAQADAIVAQLRNG*
Ga0079219_101811241	3300006954	Agricultural Soil	MAARQEAMARQEGMLREQIAIAERYPDLRACLSDRLVFLAGGRRTLPMPSDLSGITMAHADAIVAQLRNG*
Ga0105245_110395302	3300009098	Miscanthus Rhizosphere	AVDAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0099792_103540692	3300009143	Vadose Zone Soil	AAKQETMLREQIAIAERHPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0105249_105567823	3300009553	Switchgrass Rhizosphere	AKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0116224_103177211	3300009683	Peatlands Soil	AMAAKQEAMLREQIAIAERHPDLRACLTDQVVFLDGGSRVLPMAGLIGRLTLEQSDALVAQLRDG*
Ga0126376_116451442	3300010359	Tropical Forest Soil	EERVVPAVAAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0134128_124303711	3300010373	Terrestrial Soil	KIAIAARYPDLRACLSDQVVFLAGGRQTVPMPRDLMGLTMAQADAIVAQLRNG*
Ga0126381_1019499072	3300010376	Tropical Forest Soil	AAKQEAMLREQIAIAERHPDLRACLTDQVVFLESGSRALPMPNLATVTLDQADALVARLRDG*
Ga0126381_1044428911	3300010376	Tropical Forest Soil	EAMLREQIAIAERYPDLRACLNDHVVFLAGGHRVVPMSTLAKGFTLEQADAVVARLRQS*
Ga0134126_129879372	3300010396	Terrestrial Soil	YPELRACLVDKLVFLAGGRRTVPMPSDLSWITMAHADAIVAQLRNG*
Ga0134121_110886192	3300010401	Terrestrial Soil	REQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0126361_110751334	3300010876	Boreal Forest Soil	MASRQDAMLREQIAIAERHPDLRACLTDKVVFLAGGNRVLPMPSLGGSFTVEQADALVARLRGS*
Ga0157338_10572882	3300012515	Arabidopsis Rhizosphere	VSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0137413_103217812	3300012924	Vadose Zone Soil	VVPAVAAKQEAMLREQIAIAERYPDLRACLTDDVIFLAGGSRVLPMSSLSRGFTLEQADAVVAQLRNG*
Ga0164304_100660434	3300012986	Soil	AVSAKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0164305_100548781	3300012989	Soil	LREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0157369_112893541	3300013105	Corn Rhizosphere	MLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0163162_112619312	3300013306	Switchgrass Rhizosphere	EQIAIAERYPDLRACLTDNVVFLAGGLRVVPMSSLSRGFTLEQADAVVAQLRNG*
Ga0132255_1054879092	3300015374	Arabidopsis Rhizosphere	ACEERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG*
Ga0187807_10540081	3300017926	Freshwater Sediment	PTLAARQETMLREQIAIAEQHPDLRACLTDKVIFLAGGSRVMPMPNLAGITLQQAGALVAQLRAG
Ga0187780_101844993	3300017973	Tropical Peatland	ERVAPAMAARQEAMLREQIAIAERHPDLRACLADQVIFLAGGDRVLPMASVTRGITLEQADALVARLRDG
Ga0187883_104646302	3300018037	Peatland	EQIAIAERYPDLRACLSDQAVFLAGGSRVVSVPMANLTGGFTLAQADAVVAQLRNG
Ga0210405_102771003	3300021171	Soil	VGAKQEAMLREQIAIAERYPDLRACLTDNVIFLAGGSRVLPMSILRRGLTLEQADAAVAQLRNG
Ga0210397_102186351	3300021403	Soil	PAMAVKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0210389_113318741	3300021404	Soil	VVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0210383_100428036	3300021407	Soil	SRKIGRKVQDRLDQAMSTVAAKQQDTLQQQITIAERHPDLRACLNDQVVFLAGGSRVLPMPNLSTVTVDQADALVAQLRNG
Ga0210394_102904583	3300021420	Soil	IAIAERYPDLRACLTDNVIFLAGGSRVLPMSILRRGLTLEQADAAVAQLRNG
Ga0210392_110660811	3300021475	Soil	QDGMLREQIAIAERYPDLRACMNDQVVFLAGGSRTVPVPLSGLADGFTLAQADAIVAQLRSG
Ga0210402_118638272	3300021478	Soil	QALPAMMAKQEAMLREQIAIAERHPDLRACLTDQVIFLAGGSRTMPMKGVMTNLTVEQADAVVAQLRG
Ga0210410_116017731	3300021479	Soil	VPAVGAKQEAMLREQIAIAERYPDLRACLTDNVIFLAGGSRVLPMSILRRGLTLEQADAAVAQLRNG
Ga0213852_12253971	3300021858	Watersheds	MAARQQAMAGSQEAMLREQIAIAERYPELRACLTDQVIFLAGGSRVLPMASVTGGLTVEQSDAVVAQLRDG
Ga0213853_113001791	3300021861	Watersheds	TMANKVMPAMANRGQEMLRTQVAIADRHPDLRACITDKVVFLHGGNRFEPMPNLSGPLSIEDADALVARLRNG
Ga0247661_10847181	3300024254	Soil	ERVVPAVPAKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0247670_10066904	3300024283	Soil	VSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG
Ga0207692_101995931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	REQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0207685_104615331	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRN
Ga0207654_100192661	3300025911	Corn Rhizosphere	KQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRN
Ga0207654_110575761	3300025911	Corn Rhizosphere	MLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0207663_106801702	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IAIAARYPDLRACLSDQVVFLAGGRQTVPMPRDLMGLTMAQADAIVAQLRNG
Ga0207663_109250762	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0207663_110631632	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0207649_110460721	3300025920	Corn Rhizosphere	ERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG
Ga0207700_100337194	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADAVVAQLRNG
Ga0207665_106374651	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0207702_101478363	3300026078	Corn Rhizosphere	DERVGPAMAARQEAMARQEGMLREQIAIAERHPDLRACLSDKLVFLAGGRRTVPMPRDLSGLTMAHADAIVAQLRNG
Ga0207702_106694491	3300026078	Corn Rhizosphere	AIAERHPDLRACLSDRLVFLAGGGRTVPMPSDLTGLTMAQADAIVAQLRNG
Ga0207702_125147112	3300026078	Corn Rhizosphere	EGRVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADTVVAQLRNG
Ga0209621_10083092	3300026864	Forest Soil	AYEERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGRRVVPMSSLTRGFTLEQADTVVAQLRNG
Ga0207948_10455572	3300027174	Forest Soil	MAARQQAMAGRQEAMLRDQIAIAERYPELRACLTDQVIFLAGGSRVLPMSSVTGGITLEQADALVAQLRNG
Ga0209180_100640822	3300027846	Vadose Zone Soil	MQRTYDQPVRATLAAKQEEMLRTQIAIAERHPDLRACLTDQVIFLAGGSRVLPMAGVIGTLTLEQSDALVARLRDA
Ga0209488_101755473	3300027903	Vadose Zone Soil	AAKQETMLREQIAIAERHPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0222748_10872292	3300029701	Soil	QIAIAERHPDLRACLTDQVVFLAGGSRVLPMSGITRGITLEQADAVVAQLRNG
Ga0311339_108314361	3300029999	Palsa	LAARQETMLREQIAIAERHPGLRACLTDQVIFLAGGSRVLPMASVTGGLTVQQSDALVAQLSEG
Ga0311353_111917872	3300030399	Palsa	SERVLPALAVKHEAIMREQIAIAERHPDLRACLTDKVIFLAGGDRVLPMPSLTGGFTVEQSDAVVARLRDG
Ga0311355_103234062	3300030580	Palsa	AVKHEAIMREQIAIAERHPDLRACLTDKVIFLAGGDRVLPMPSLTGGFTVEQSDAVVARLRDG
Ga0302317_103680671	3300030677	Palsa	VKHEAIMREQIAIAERHPDLRACLTDKVIFLAGGHRVLPMPSLTSGFTVEQSDAVVARLRDG
Ga0170824_1135067242	3300031231	Forest Soil	EERVVPAVAAKQDAMLREQIAIAERYPELRACLTDKVIFLAGGSRVLPMTGANLMITLQQADVLVEQLREG
Ga0170819_163145282	3300031469	Forest Soil	VVPAMTARQEAMAGRKEALLREQIAIAERHPDLRACLTDQVIFLAGGSRVLPLSSVTGGITIEQADTLVAQLRGG
Ga0318515_107108951	3300031572	Soil	REQIAIAERYPDLRACLTDNVIFLAGGNRVVPMSSLRRGITLEQADAVVAQLRNG
Ga0318555_107010901	3300031640	Soil	PAMMAKQEAMLREQIAIAERHPDLRACLTDQVIFLAGGSRTIPMKGVMTNLTVEQADAVVAQLRD
Ga0318494_102984071	3300031751	Soil	VQDKLAQQVVPALAAKQEAMLREQIAIAERHPDLRACLTDQVVFLDGGSRALPMPNLATVTLDQADALVARLRDG
Ga0318546_103360132	3300031771	Soil	QEAMLREQIAIAERHPDLRACLTDQVVFLEGGSRALPIPNLATVTLDQADALVASLRDG
Ga0318508_12232151	3300031780	Soil	QQETVLREQIAIAERYPDLRACLTDQVVFLAGGSRVVPMSSLSRGITLEQADAVVAQLRS
Ga0307478_118181962	3300031823	Hardwood Forest Soil	MAAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGSRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0318495_102939321	3300031860	Soil	VVPAMAARQEAVLREQIAIAERHPDLRACLTDQVVFLAGGSRVMPMPNLANVTLEQADVLVARLRDG
Ga0318551_106672101	3300031896	Soil	LPAMMAKQEAMLREQIAIAERHPDLRACLTDQVIFLAGGSRTMPMKGVMTNLTVEQADAVVAQLRG
Ga0306921_112701031	3300031912	Soil	VSEQVLPALAARQEATLRAQIEIAERHPGLRACLTDQVVFLADGSRALPMPSLTGLTVEQADALVARLRDG
Ga0306926_102622391	3300031954	Soil	AARQEATLRAQIEIAERHPGLRACLTDQVVFLADGSRALPMPSLTGLTVEQADALVARLRDG
Ga0318506_100731483	3300032052	Soil	KQETVLREQIAIAERYPDLRACLTDQVVFLAGGSRVVPMSSLSRGITLEQADAVVAQLRS
Ga0318505_104478521	3300032060	Soil	AMLREQIAIAERHPDLRACLTDQVVFLEGGSRALPIPNLATVTLDQADALVASLRDG
Ga0318553_102103501	3300032068	Soil	YEERVVPAMAAKQETVLREQIAIAERYPDLRACLTDQVVFLAGGSRVVPMSSLSRGITLEQADAVVAQLRSG
Ga0335085_103984103	3300032770	Soil	VVPAVAAKQEAMLREQIAIAERYPDLRACLTDNVIFLAGGRRVVPMSSLSRGLTLEQADAVVAQLRNG
Ga0335081_108061211	3300032892	Soil	GMSAAAAKQQDVLRQQIAIAERHPELRACLTDSVVFLAGGSRIQPMPNLSTITVEQSDALVTALRGG
Ga0335072_112441731	3300032898	Soil	EKVVPTIMAKRQEMLQQQIAIAERHPDLRACLTDHVVFLAGGSRVQPMPNLAGPFTVEQSDALVASLRDG
Ga0335083_103269673	3300032954	Soil	IAIAERYPDLRACLTDNVIFLAGGSRVVPMSSLSRGITLEQADAIVAQLRNG
Ga0335083_109371961	3300032954	Soil	VPAVSAKQDAMLREQIAIAERYPELRACLTDNVVFLAGGNRVVPMSSLSRGFTLEQADAVVAQLRNG
Ga0335076_101845453	3300032955	Soil	AKRQEVLQQQIAIAERHPDLRACLTDNVVFLAGGSRVQPMPNLAGPLTVEQSDALVASLRDG
Ga0335073_115804131	3300033134	Soil	ERVVPAVSAKQDAMLREQIAIAERYPDLRACLTDNVVFLAGGNRVVPMSSLRGFTLEQADAVVAQLRNG
Ga0335077_100779311	3300033158	Soil	DQVLPTLAARRDTMLRQQIAIAERHPDLRACLTDKVIFLAGGSRVLPMPNLGGNLTVEQADALVAQLRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074073

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences