Metagenome / Metatranscriptome Family F074069

Basic Information
Family ID	F074069
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	55 residues
Representative Sequence	MNPAAEGTVYPDVAFVVDPARVAAFRDVFGQTEGVPPTFVTAAEF
Number of Associated Samples	109
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.15 %
% of genes near scaffold ends (potentially truncated)	96.67 %
% of genes from short scaffolds (< 2000 bps)	94.17 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (25.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.167 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.77% β-sheet: 0.00% Coil/Unstructured: 71.23%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00072	Response_reg	60.00
PF00196	GerE	25.00
PF00471	Ribosomal_L33	3.33
PF00440	TetR_N	3.33
PF03143	GTP_EFTU_D3	1.67
PF16859	TetR_C_11	1.67
PF13551	HTH_29	0.83
PF01551	Peptidase_M23	0.83
PF13452	MaoC_dehydrat_N	0.83
PF14492	EFG_III	0.83
PF03144	GTP_EFTU_D2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	3.33

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.17 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.33 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01A66LF	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig64351	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig805596	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300000956\|JGI10216J12902_100581053	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300001538\|A10PFW1_11504963	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004081\|Ga0063454_100690909	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300004153\|Ga0063455_100203949	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300004463\|Ga0063356_105288452	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300004479\|Ga0062595_101344239	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300004480\|Ga0062592_100606461	Not Available	932	Open in IMG/M
3300005187\|Ga0066675_10292075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1177	Open in IMG/M
3300005341\|Ga0070691_10449267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300005341\|Ga0070691_10562593	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005345\|Ga0070692_10594849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300005366\|Ga0070659_100632065	All Organisms → cellular organisms → Bacteria → Terrabacteria group	922	Open in IMG/M
3300005441\|Ga0070700_100760151	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005446\|Ga0066686_10898095	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005450\|Ga0066682_10610948	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005546\|Ga0070696_100542811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300005553\|Ga0066695_10235695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1153	Open in IMG/M
3300005568\|Ga0066703_10054581	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300005576\|Ga0066708_10969778	All Organisms → cellular organisms → Bacteria → Terrabacteria group	529	Open in IMG/M
3300005615\|Ga0070702_100322925	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005617\|Ga0068859_101288437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300005719\|Ga0068861_102389496	Not Available	531	Open in IMG/M
3300005843\|Ga0068860_102139741	All Organisms → cellular organisms → Bacteria → Terrabacteria group	581	Open in IMG/M
3300005985\|Ga0081539_10169151	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300006034\|Ga0066656_10927821	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300006041\|Ga0075023_100576871	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006163\|Ga0070715_10697046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	606	Open in IMG/M
3300006175\|Ga0070712_100278068	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300006572\|Ga0074051_11512968	All Organisms → cellular organisms → Bacteria → Terrabacteria group	536	Open in IMG/M
3300006574\|Ga0074056_11725680	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006575\|Ga0074053_11282483	All Organisms → cellular organisms → Bacteria → Terrabacteria group	510	Open in IMG/M
3300006871\|Ga0075434_100573160	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300006904\|Ga0075424_102126509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	591	Open in IMG/M
3300006914\|Ga0075436_100040622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3209	Open in IMG/M
3300009012\|Ga0066710_101393146	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300009012\|Ga0066710_102269210	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300009012\|Ga0066710_102639146	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009131\|Ga0115027_10286981	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300009789\|Ga0126307_11300920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300010039\|Ga0126309_10534220	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010044\|Ga0126310_10755147	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010325\|Ga0134064_10276670	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300010329\|Ga0134111_10096872	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300010358\|Ga0126370_11246054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300010373\|Ga0134128_12635094	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300010397\|Ga0134124_10422906	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300010400\|Ga0134122_10455158	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012206\|Ga0137380_10237662	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300012209\|Ga0137379_11450146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300012349\|Ga0137387_10571209	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300012357\|Ga0137384_11432365	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300012896\|Ga0157303_10188387	All Organisms → cellular organisms → Bacteria → Terrabacteria group	586	Open in IMG/M
3300012903\|Ga0157289_10367751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300012907\|Ga0157283_10017152	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012912\|Ga0157306_10010506	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300012958\|Ga0164299_11687491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300012961\|Ga0164302_11568780	All Organisms → cellular organisms → Bacteria → Terrabacteria group	546	Open in IMG/M
3300012972\|Ga0134077_10122900	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300012984\|Ga0164309_10216737	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012984\|Ga0164309_11554511	Not Available	566	Open in IMG/M
3300012987\|Ga0164307_10720960	All Organisms → cellular organisms → Bacteria → Terrabacteria group	784	Open in IMG/M
3300012988\|Ga0164306_10083498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2039	Open in IMG/M
3300013306\|Ga0163162_11184319	All Organisms → cellular organisms → Bacteria → Terrabacteria group	867	Open in IMG/M
3300013306\|Ga0163162_13306471	Not Available	516	Open in IMG/M
3300014320\|Ga0075342_1223375	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300015077\|Ga0173483_10060705	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300015359\|Ga0134085_10475441	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300015372\|Ga0132256_102643435	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300015373\|Ga0132257_102355769	All Organisms → cellular organisms → Bacteria → Terrabacteria group	690	Open in IMG/M
3300017654\|Ga0134069_1050592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300017974\|Ga0187777_11465546	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300018027\|Ga0184605_10080391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1420	Open in IMG/M
3300018027\|Ga0184605_10498089	Not Available	531	Open in IMG/M
3300018029\|Ga0187787_10200429	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300018433\|Ga0066667_11159851	All Organisms → cellular organisms → Bacteria → Terrabacteria group	670	Open in IMG/M
3300019279\|Ga0184642_1303757	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300019356\|Ga0173481_10109776	Not Available	1076	Open in IMG/M
3300019356\|Ga0173481_10384322	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300019377\|Ga0190264_10788849	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300019377\|Ga0190264_10919000	All Organisms → cellular organisms → Bacteria → Terrabacteria group	686	Open in IMG/M
3300019878\|Ga0193715_1033915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300021344\|Ga0193719_10460044	All Organisms → cellular organisms → Bacteria → Terrabacteria group	516	Open in IMG/M
3300021445\|Ga0182009_10332794	All Organisms → cellular organisms → Bacteria → Terrabacteria group	772	Open in IMG/M
3300023077\|Ga0247802_1025827	All Organisms → cellular organisms → Bacteria → Terrabacteria group	848	Open in IMG/M
3300025915\|Ga0207693_10137456	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300025927\|Ga0207687_11058476	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300025927\|Ga0207687_11254511	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300025927\|Ga0207687_11346485	All Organisms → cellular organisms → Bacteria → Terrabacteria group	614	Open in IMG/M
3300025933\|Ga0207706_10401653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1188	Open in IMG/M
3300025945\|Ga0207679_11408299	Not Available	640	Open in IMG/M
3300025981\|Ga0207640_10289836	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300026075\|Ga0207708_10816214	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300026540\|Ga0209376_1137129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300026547\|Ga0209156_10028496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3209	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10421024	All Organisms → cellular organisms → Bacteria → Terrabacteria group	618	Open in IMG/M
3300028381\|Ga0268264_11098408	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300028705\|Ga0307276_10165573	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300028718\|Ga0307307_10306976	All Organisms → cellular organisms → Bacteria → Terrabacteria group	511	Open in IMG/M
3300028755\|Ga0307316_10053204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1362	Open in IMG/M
3300028790\|Ga0307283_10168725	All Organisms → cellular organisms → Bacteria → Terrabacteria group	613	Open in IMG/M
3300028878\|Ga0307278_10136404	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300030006\|Ga0299907_10911513	Not Available	653	Open in IMG/M
3300030336\|Ga0247826_10262011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300031366\|Ga0307506_10086165	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300031366\|Ga0307506_10214668	Not Available	714	Open in IMG/M
3300031740\|Ga0307468_100664407	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031834\|Ga0315290_10396505	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031873\|Ga0315297_10911025	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031997\|Ga0315278_10472522	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300032002\|Ga0307416_102212133	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300032018\|Ga0315272_10666937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300032180\|Ga0307471_102773860	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300032205\|Ga0307472_101316745	All Organisms → cellular organisms → Bacteria → Terrabacteria group	696	Open in IMG/M
3300033550\|Ga0247829_10243710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1443	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.50%
Host-Associated	Host-Associated	17.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Plants	Host-Associated → Plants	17.50%
Aquatic	Environmental → Aquatic	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Freshwater	Environmental → Aquatic → Freshwater	5.83%
Sediment	Environmental → Aquatic → Sediment	2.50%
Marine	Environmental → Aquatic → Marine	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.17%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Lake	Environmental → Aquatic → Freshwater → Lake	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.67%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_00358190	2067725003	Soil	MNPAAEGTVYPDVAFVVDPARVAAFRDVFGQIEGVPPTFVTAAEFTVFPQVLGDPR
Perma_A_C_01245600	2124908032	Soil	MNPAAEGTTYPDVAFTVDPARVAAFRQLFGMTEGVPPTFVTSAEFMVFPRITGDPN
KansclcFeb2_09023420	2124908045	Soil	MNAAAEGSTYPPVVVTVDPERVAAFRALFGIARGVPPTFATAAEFAALPQV
JGI10216J12902_1005810531	3300000956	Soil	MDPAAEGTVYPPVGFVVDPERVAAFRALFGIEDGVPPTFATAAEFVALPPVLGDPRL
A10PFW1_115049632	3300001538	Permafrost	VRGVNPAAQGKVYPPVAFVVDPARVAAFAGLFGQAGG
Ga0055468_103057681	3300003993	Natural And Restored Wetlands	VPAVNPEAEGAVYPDVDFVVESGRVAAFRAVFGQSEGVPPTFLTSAEFSVLPPIIGDPALDLDFTRVLHGGQEYEL
Ga0063454_1006909091	3300004081	Soil	MNPAAEGTVYADVPFTVDPARVAAFRRVLGVAEGVPPTFVTSAEFT
Ga0063455_1002039492	3300004153	Soil	VNPAAEGTVYPDIEFMVDPARVAAFREVVGATDGVPPTFVTAAEFTVFPH
Ga0063356_1052884522	3300004463	Arabidopsis Thaliana Rhizosphere	MNPAAEGTVYPDVAFTVDPGRVAAFREVFGQSEGVPPTFVTAAEFMVFPQVMGDPNLGLDFTRVVHGSQEYV
Ga0062595_1013442391	3300004479	Soil	MNPSAEGTVYPDVSFVVDPGRVAAFRAVFGLETGVPPTFVTAAEFAVFPQILGDPRL
Ga0062592_1006064612	3300004480	Soil	MNPAAEGTVYPDVAFVVDPARVAAFRDVFGQTEGVPPTFVTAAEF
Ga0066675_102920751	3300005187	Soil	MLSRERGGASVPGVNRAAEGTRYPEVSFQVSPERVAAFREIFGQPHGVPPTLATAAEFAVFPSVI
Ga0070691_104492672	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPPTFVTAAEFTIFPLVIGDPNLGLDFTRVLHGSQEY
Ga0070691_105625931	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MNPSAEGTVYPDVSFVVAPDRVAAFRAVFGLETGVPPTFVT
Ga0070692_105948492	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPPTFVTAAEFTVFPLVIGDPNLGL
Ga0070659_1006320651	3300005366	Corn Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSAGGVPPTFVTAAEFTVFPHVIGDPNL
Ga0070700_1007601512	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNPSAEGTVYPDVSFVVAPDRVAAFRAVFGLETGVPPTFVTAAEFAVFPQILGDPRLGV
Ga0066686_108980951	3300005446	Soil	MNPDAEGTVYPAVEFVVDPERVSAFRDLFRIDHGVPPTYLTAA
Ga0066682_106109482	3300005450	Soil	MNPAAEGTTYPAVAFIVDPSRVAAFRALFGIDEGVPPTFVTAAEFAAFPQV
Ga0070696_1005428112	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTTYPAVPFVVDPPRVAAFRSLFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFSRVVHASQ
Ga0066695_102356951	3300005553	Soil	MNPAAEGTTYPAVPFVVEPSRVAAFRALFGISEGV
Ga0066703_100545814	3300005568	Soil	MNPAAEGTTYPAVPFTIEPSRVAAFRTLFGIDEGVPPTFVTAAEFAAFPQVLADRHL
Ga0066708_109697782	3300005576	Soil	MNPAAEGTTYPAVPFTVEPSRVAVFRNLFGIGEGVPPTFVTAAEFAAFPQV
Ga0070702_1003229251	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPPTFVTAAEF
Ga0068859_1012884371	3300005617	Switchgrass Rhizosphere	MNPAAEGTVFPEVAFVVDPTRVAAFREVFGQAEGVPPTFVTAAEFTVFPQVLGDPHLALDFTRVVHGSQDYRFE
Ga0068861_1023894962	3300005719	Switchgrass Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGATGGVPPTFVTAAEFTVF
Ga0068860_1021397412	3300005843	Switchgrass Rhizosphere	MNPAAEGTTYPAVPFVVDPPRVAAFRSLFGISEGVPPT
Ga0081539_101691511	3300005985	Tabebuia Heterophylla Rhizosphere	MNPAAEGTVYPEVTFTVDPARVAAFRQVFGAAHGVPPTFVTAAEFSVLP
Ga0066656_109278211	3300006034	Soil	VNPEAEGTVYPAVDVVVDPERVAAFRALFGIDDGVPPTFVTAAEF
Ga0075023_1005768712	3300006041	Watersheds	MDPAAQGTRYPDVAFQVTPARVDEFRRVFGQTQGVPPTFVTVG
Ga0070715_106970462	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFAVDPVRVAAFREVFGVSDGVPPTFVTAAEFTVLPQVIGDPALGLDFT
Ga0070712_1002780684	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFVVDPARVAAFRKVFGVSDGVPPTFVTAAEFTVFPHVIGDP
Ga0074051_115129681	3300006572	Soil	VHPQAEGTTYPDVAFFVDPQRVAAFREVFGLTEGVPPTFVTAAEFTVLPTIVGDPAVGID
Ga0074056_117256801	3300006574	Soil	MNQAAEGTTYPDVAFTVDPARVAAFRDLFGQRGGVPPTFVTAAEFAVLPRIIDDPELGLDFSSYEGRRELII
Ga0074053_112824832	3300006575	Soil	MNPAAEGTVYPDVAFTVDPARVAAFREVFGQTEGVPPTFVT
Ga0075434_1005731601	3300006871	Populus Rhizosphere	MNPAAEGTVYPDVSFVVDPARVAAFREVFGVSDGVPPTFVTAAEFTVFPHVIGDPALG
Ga0075424_1021265092	3300006904	Populus Rhizosphere	MNPAAEGTTYAAVPFVVDPSRVAAFRSLFGISEGVPP
Ga0075436_1000406227	3300006914	Populus Rhizosphere	MNAAAEGSTYPPVVVVVDPERVAAFRRLFGIVDGVPPTFATAAEF
Ga0066710_1013931462	3300009012	Grasslands Soil	VPRVDPAAEGTRYPDVTFEVSPERVAAFREVFGQTHGVPPTFATAAEFAVFPFVIGDPGLALDFTKVI
Ga0066710_1022692101	3300009012	Grasslands Soil	MNPDAEGTTYPAVGFVVDPERVAAFRSLFGIANGVPPTFATAAESAAF
Ga0066710_1026391462	3300009012	Grasslands Soil	MLYAVRVGDTVPGVNPAAEGTRYPDVEFSVSPERVAAFREVFDQAHGVPPTFATAAEFAVFPFVIGDPGLALDFTKVI
Ga0115027_102869811	3300009131	Wetland	MRDSAAMNPEAEGTVYPPTVITVEPERVAAFRAVFGQAGGIPPTFMTTVEFVVFPQVLGDPTLALDFGRVLHGSQEYAYERPLV
Ga0126307_113009202	3300009789	Serpentine Soil	MNPAAEGTVYPDVPFVVDPERVAAFRTVFGQAHGVPPTFVTAAEFSVFPRVIGDPRLALDFTRVVHGSQE
Ga0126309_105342202	3300010039	Serpentine Soil	VNPEAEGTTYPAVEFVVDPVRVAAFRDVFGQSAGVPPTFLT
Ga0126310_107551472	3300010044	Serpentine Soil	MNPAAEGTEYPDVVFVVDPERVAAFRKVFDQAHGVPPTFVTA
Ga0134064_102766702	3300010325	Grasslands Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVTAAEFAAFPQVLADRHLDLDFSRVVHGSQGYAC
Ga0134111_100968723	3300010329	Grasslands Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVTAAEFAAFPQVLADRHLD
Ga0126370_112460542	3300010358	Tropical Forest Soil	MNPAAEGTVYPDVPFVVDPTRVAAFREVFGLSEGVPPTFVTAAEFTVFPRVIGDPVLDL
Ga0134128_126350942	3300010373	Terrestrial Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPP
Ga0134124_104229061	3300010397	Terrestrial Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGATGGVPPTFVTAAEFTVFPHVIGDPNLGL
Ga0134122_104551582	3300010400	Terrestrial Soil	MNPSAEGTVYPDVSFVVDPGRVAAFRAVFGLETGVPPTFVTAAEFAVFPQILG
Ga0137380_102376624	3300012206	Vadose Zone Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGIRE
Ga0137379_114501462	3300012209	Vadose Zone Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGIREGVPPTFVTAAESAAFPQVLADRHLDLDFSRIVHGSQGYLFRRPL
Ga0137387_105712091	3300012349	Vadose Zone Soil	MLSEIRLGDTVPGVNPAAEGTRYPDVVFHVSPERVAAFREVFDQAHGVPPTFATAAEFAVFPLVIGDTGLGLDFTRV
Ga0137384_114323651	3300012357	Vadose Zone Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGIREGVPPTFVTAAESAAFPQVL
Ga0157303_101883872	3300012896	Soil	MDPAAEGTTYPAVPFVVDPSRVAAFRALFGIDEGVPPTFVTAAEFAAFPQVLADRNLDLDFSR
Ga0157289_103677512	3300012903	Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGAIGGVPPTFVTAA
Ga0157283_100171521	3300012907	Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPPTFVTAAEFTVFP
Ga0157306_100105064	3300012912	Soil	MNPAAEGTTYPAVPFVVDASRVAAFRSLFGISEGVPPTFVTA
Ga0164299_116874911	3300012958	Soil	MNPAAEGTTYPAVPFVVDPLRVAAFRSLFGISEGVPP
Ga0164302_115687801	3300012961	Soil	MNPAAEGTVYPDVAFTVDPARVAAFREVFGQTEGVPPTFVTAAEFTVFPQVMGDPNL
Ga0134077_101229002	3300012972	Grasslands Soil	MNPDAEGTTYPAVGFVVDPERVAAFRSLFGIAEGVPPTFAT
Ga0164309_102167373	3300012984	Soil	MNPAAEGTVYPDVPFVVDPARVAAFREVFGVSDGVPPTFVTAAEFTVFPHVIGDPALALDFSRVLHGSQEYMY
Ga0164309_115545112	3300012984	Soil	MNPAAEGTVYPDVAFTVDPARVAAFREVFGQTEGVPPTFVTAAEFTVFPQVMGDPNLGLDFTRVVHGSQE
Ga0164307_107209602	3300012987	Soil	MNPAAEGTVYPDVAFTVDPARVAAFREVFGQTEGVPPTFVTAAEFTVFPQVMGDPNVGLALKRAVTGSQE*
Ga0164306_100834984	3300012988	Soil	MNPAAEGTTYAAVPFVVDPSRVAAFRSLFGISEGVPPTFVTAAEFAALPQIVA
Ga0163162_111843192	3300013306	Switchgrass Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGSTGGVPPTFV
Ga0163162_133064712	3300013306	Switchgrass Rhizosphere	MNPAAEGTVYPDIAFVVDPARVAAFRDVFGQTEGVPPTFVTAAEFTVFPQVLGDPRLALDFARVVHGSQD
Ga0075311_10229711	3300014259	Natural And Restored Wetlands	VRAVNPQAEGTIYPDVEFVVDPSRVSAFRAVFGQEAGVPPTFLAAAEFAVLPRVIDDPALDLDFSRVLHG
Ga0075348_12385911	3300014319	Natural And Restored Wetlands	VRAVNPEAEGRVYPDVKFVVEPDRVAAFRAVFGQADGVPPTFLTAAEFAVLPPIIGDPALDLDFTKVLHGGQEYEL
Ga0075342_12233751	3300014320	Natural And Restored Wetlands	VRAVNPEAEGRVYPDVKFVVEPDRVAAFRAVFGQADGVPPT
Ga0173483_100607054	3300015077	Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGAAGGVPPTFVTAA
Ga0134085_104754411	3300015359	Grasslands Soil	VKEPTTMNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVTAAEFAA
Ga0132256_1026434351	3300015372	Arabidopsis Rhizosphere	MNPAAEGTVYPDVPFVVDPARVAAFRRVFGVSDGVPPTFVTAAEFTVFPHVIGDPA
Ga0132257_1023557691	3300015373	Arabidopsis Rhizosphere	MNPAAEGTVYPDVPFVVDPARVAAFRKVFGVSDGVPPTF
Ga0134069_10505924	3300017654	Grasslands Soil	MNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVT
Ga0187777_114655461	3300017974	Tropical Peatland	VNPAAEGTVYPAVRFEVGEAAVASFRTVFGQADGVPPTFATVAEFLAFPQAIGDPALD
Ga0184605_100803911	3300018027	Groundwater Sediment	MNPAAEGTTYPAVPFVVDPSRVAAFRALFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFSRVVHGSQ
Ga0184605_104980891	3300018027	Groundwater Sediment	MNPAAEGTTYPAVPFVVDPSRVAAFRSLFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFSRVVHGSQ
Ga0187787_102004291	3300018029	Tropical Peatland	MDPAAEGAVFPDVPFHVDPERVAAFRALFGQADGVPPTFVTAAEFSVLPTVIA
Ga0066667_111598511	3300018433	Grasslands Soil	MNPAAEGTTYPAVAFIVDPSRVAAFRALFGIDEGVPPTFVTAAEFAAFPQVVADRHLDLD
Ga0184642_13037571	3300019279	Groundwater Sediment	VPRVDPAAEGTRYPDVTFEVSPERVAAFRHVFGQSHGVPPTFATAAEFAVFPFVIGDPGLALDFTRVIH
Ga0173481_101097761	3300019356	Soil	MNPAAQGTVYPDVAFVVDPARVAAFREVFGQTEGVPPTFVTAAEFTVFPQVLGDPRLG
Ga0173481_103843222	3300019356	Soil	MDPAAEGTTYPAVPFVVDPSRVAAFRSLFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFARVVHG
Ga0190264_107888492	3300019377	Soil	VPAVNPEAEGTTYPAVEFVVEPERVAAFRRVFGQREGVP
Ga0190264_109190001	3300019377	Soil	MNPDVAGKVYPEVPFIVDPARVAAFREVVGQAEGVPPTFATAAEFTVFPTVIGDPELDLDFSR
Ga0193715_10339153	3300019878	Soil	MNPAAEGTTYPAVPFVVDASRVAAFRSLFGISEGV
Ga0193719_104600441	3300021344	Soil	MNPAAEGTTYPAVPFVVDPSRVAAFRSLFGISEGVPPTFVTAAEFAAFPQIVA
Ga0182009_103327942	3300021445	Soil	MNPDAEGTVYPDVPFTVDLDRVAAFRAVVGERDGVPPTFVTAAE
Ga0247802_10258272	3300023077	Soil	MNPAAEGTVYPDVPFTVDPQRVAAFRDVFGATGAVPPTFVTAAEFTVFPLVIGDPNLG
Ga0207693_101374564	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNPAAEGTVYPDVPFAVDPVRVAAFREVFGVSDGVPPTFVTAAEFTVLPQVIGD
Ga0207687_110584761	3300025927	Miscanthus Rhizosphere	MNPSAEGTVYPDVSFVVDPGRVAAFRAVFGLETGVPPTFVT
Ga0207687_112545111	3300025927	Miscanthus Rhizosphere	MNPAAEGTVYPDVPFTVTPQRVAAFRDVFGATEGVPPTFVTAAEFTVFPHVIGDPNLGLD
Ga0207687_113464851	3300025927	Miscanthus Rhizosphere	MNPAAEGTVYPDVPFTVDPQRVAAFREVFGAIGGVPPTFVTAAEFTV
Ga0207706_104016533	3300025933	Corn Rhizosphere	MNPAAEGTTYPAVSFVVEPSRVAAFRSLFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFSRVVHGSQTY
Ga0207679_114082991	3300025945	Corn Rhizosphere	MNPAAEGTVYPDVAFVVDPARVAAFRDVFGQTEGVPPTFVTAAEFT
Ga0207640_102898363	3300025981	Corn Rhizosphere	MNPAAEGTVYPEVPFTVDPQRVAAFRDVFGSTGGVPPTFVTAAEFT
Ga0207708_108162142	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNPSAEGTVYPDVSFVVAPDRVAAFRAVFGLETGVPPTFVTAAEFAVFPQILGDPRLG
Ga0209376_11371293	3300026540	Soil	MNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVTAAEFAAFPQILAD
Ga0209156_100284961	3300026547	Soil	MNPAAEGTTYPAVPFTVEPSRVAAFRTLFGISEGVPPTFVTAAEFA
(restricted) Ga0233417_104210242	3300028043	Sediment	MNPAAEGTRYPDVGFVVEPSRVAAFRDVFGQRTGVPPTFLTAAEFTVFPQVIGDPALGLD
Ga0268264_110984081	3300028381	Switchgrass Rhizosphere	MNPAAEGTTYPAVPFVVDPPRVAAFRSLFGISEGVPPTF
Ga0307276_101655731	3300028705	Soil	MNPAAEGTTYPAVPFLVDPSRVAAFRALFGISEGVPPTFVTAAEFAAFPQIVADRHLDLDFSRVVHGSQT
Ga0307307_103069761	3300028718	Soil	MEPAAEGTTYPAVPFVVEPSRVAAFRALFGISDGVPP
Ga0307316_100532044	3300028755	Soil	MNPAAEGTTYPAVPFVVDPSRVAAFRALFGISEGVPPTFVTAAEFAAFPQIVADRHL
Ga0307283_101687252	3300028790	Soil	MNPAAEGTVYPDVAFTVDPARVAAFREVFGQTHGVPPTFVTAAEFTV
Ga0307278_101364042	3300028878	Soil	MDPAAEGTTYPAVRFVVEPSRVAAFRAVFGISDGVPPTFVTAAEFAAFPQIVADQHLDLDFSRVVHGS
Ga0299907_109115132	3300030006	Soil	MNPAAQGTTYPDVTFTIDPVRVAAFRDAVGQAAGVPPTFVTAAEFSIFPDVIAD
Ga0247826_102620114	3300030336	Soil	VNRAAEGTVYPPVTFVVDPDRVAAFRAVFGQVEGVPPTFLTAAE
Ga0307506_100861652	3300031366	Soil	MNPAAEGTVYPEITFVVDPEQVAAFREVFGQTGGVPPTFVSVAEFL
Ga0307506_102146682	3300031366	Soil	MNPAAQGTVYPDVAFVVDPARVASFREVFGQTEGVPPTFVTAAEFTVFPQVLGDPRLALDFTRV
Ga0307468_1006644072	3300031740	Hardwood Forest Soil	MNPAAEGTTYPAVPFVVDPLRVAAFRSLFGISEGVPPTFVTAAEFAAFPQILTDRHLDLDFSRV
Ga0315290_103965051	3300031834	Sediment	MNPAAEGTVYPDVTFVVDPERVAAFREVFGQTQGVPPTFVSVAEFSVIPTVV
Ga0315297_109110251	3300031873	Sediment	MNPAAEGTTYPDVVFTVDPARVATFRELFGTTQGVPPTFVTAAEFTVFPRIIADPNLALNFSRAL
Ga0315278_104725223	3300031997	Sediment	MNPAAEGTVYPDVTFVVEPERVAAFREVFGQAQGV
Ga0307416_1022121331	3300032002	Rhizosphere	VPAVNPEAEGTTYPAVEFVIEPARVAAFRDVFGGSSG
Ga0315272_106669372	3300032018	Sediment	MNPAAEGTVYPDVTFVVEPERVAAFREVFGQTQGVPPTFVSVAEFSMIPTVVADPNLGLDFSR
Ga0307471_1027738602	3300032180	Hardwood Forest Soil	MNPAAEGTVYPDVVFTVDPARVAAFREVFGQTKGVPPTFVTAAEFTVFPQVLGDPNLGLDFTRVVHGSQ
Ga0307472_1013167451	3300032205	Hardwood Forest Soil	MNPAAEGTVYPDVAFTVDPARVAAFRRVFGDTQGVPPTFVTAAEF
Ga0247829_102437101	3300033550	Soil	VRAVNPAAEGTVYPDVDFVVEPGRVAAFRAVFGQADGVPPTFLTAAEFAAFPPIIGDPAVDLDFTKVLHGGQEYE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters