Metagenome / Metatranscriptome Family F074065

Basic Information
Family ID	F074065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	75 residues
Representative Sequence	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (48.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00364	Biotin_lipoyl	46.67
PF01546	Peptidase_M20	10.83
PF02817	E3_binding	10.00
PF04389	Peptidase_M28	5.00
PF08241	Methyltransf_11	0.83
PF11154	DUF2934	0.83
PF00563	EAL	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	10.00
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.83
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.83
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.83
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.83

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.00%
Environmental	Environmental	45.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.00%
Terrestrial	Environmental → Terrestrial	44.17%
Unclassified	Environmental → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.50%
Unclassified	Environmental → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.83%
Loam	Environmental → Terrestrial → Soil → Loam	18.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.67%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00298830	2124908016		SSSVKTGADEPRQKRTRRLVKPGSRRRAAAAAAPVTHEQIALRAYELHLLGEGSDPMENWLKAERELVAA
C688J14111_102420451	3300001305	Soil	SMPKDTTTTAKTTTAKRVRRAVKPASRKRAAAPARVTHEQIALRAYELHIAGVGADPMDNWLRAERELVSA*
C688J18823_103580202	3300001686	Soil	MPKDTTTAKETTTKRVRRAVKAPARKRTAAPAPVTHEQIALRAYELHLLGAGADPMENWLRAERELVSA*
C688J35102_1180449412	3300002568	Soil	MPRTTTAKTADEAPRAKRTRRITRPASRKRLAEPRPVSHEQIALRAYELHLLGEGTDPMENWLRAERELVSV*
C688J35102_1187383061	3300002568	Soil	MPKEPTIAKTSTAKRVRRAVKPAGRKRAAAAASVTHDQIALRAYELHLLGAGADPMDNWLRAERELVSA*
C688J35102_1194577951	3300002568	Soil	MPKDATTAKTTTAKRVRRAVKPAARKRAAAPAPISHEQIALRAYELHLLGAGQDPMDNWLRAERELVSA*
C688J35102_1200724122	3300002568	Soil	MPKDTTTTAKTTTAKRVRRAVKPASRKRAAAPARVTHEQIALRAYELHIAGVGADPMDNWLRAERELVSA*
Ga0063356_1013587932	3300004463	Arabidopsis Thaliana Rhizosphere	MPKTTKTADETPQPRARRARRVVRPSRKRAAAPAPVTHEQIALRAYELHLLGAGADPMENWLRAERELVRAA*
Ga0062595_1023390921	3300004479	Soil	MPKDSTATKATATKRVRRAVRPSARKRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA*
Ga0070676_103289492	3300005328	Miscanthus Rhizosphere	MPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070676_113401932	3300005328	Miscanthus Rhizosphere	QGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070683_1016639791	3300005329	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0068869_1006537642	3300005334	Miscanthus Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070680_1008972042	3300005336	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRGAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070692_104658722	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	QGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPVPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070668_1006585011	3300005347	Switchgrass Rhizosphere	AAPGEPLVSTRIRRDPGHCTTDQGAPTMPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070668_1011181682	3300005347	Switchgrass Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGDDPMENWLRAERELVEAA*
Ga0070671_1010422691	3300005355	Switchgrass Rhizosphere	MPKTTAKTADATPQPRGRRTRRTVKPSLRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070674_1000177523	3300005356	Miscanthus Rhizosphere	MPKTTARTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0070688_1004478772	3300005365	Switchgrass Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0070659_1000311634	3300005366	Corn Rhizosphere	MPKTTAMTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070710_100777132	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRAAASAPVSHEQIALRAYELHLLGVGADPMENWLRAERELVAAA*
Ga0070708_1020758052	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070663_1021128482	3300005455	Corn Rhizosphere	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLR
Ga0070678_1009948472	3300005456	Miscanthus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRGAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0068867_1004080132	3300005459	Miscanthus Rhizosphere	MPKTTARTADETRQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070685_104525982	3300005466	Switchgrass Rhizosphere	PTMPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070684_1013596571	3300005535	Corn Rhizosphere	MPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPME
Ga0068856_1006608722	3300005614	Corn Rhizosphere	MPKTTARTADETPQPRVRRTRRALKPSSRKRAAAPVPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0068852_1012412022	3300005616	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVE
Ga0068866_103259952	3300005718	Miscanthus Rhizosphere	MPRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGQGRDPMENWLRAERELVSA*
Ga0068861_1004863371	3300005719	Switchgrass Rhizosphere	HIRPKEGARTMPKDSTATKATATKRVRRAVKPSARKRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA*
Ga0068860_1002467832	3300005843	Switchgrass Rhizosphere	MPRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0068860_1027786211	3300005843	Switchgrass Rhizosphere	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLR
Ga0075432_103682332	3300006058	Populus Rhizosphere	LMARRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0070715_108285002	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VPGEPPVSTRVRRGPGHRTTDQGAPTMPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRAAASAPVSHEQIALRAYELHLLGAGADPMENWLRAERELV
Ga0070716_1013340232	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPKTTAKTADETPQPRVRRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVAA
Ga0070712_1000979272	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPGEPPVSTRVRRGPGHRTTDQGAPTMPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRASASAPVSHEQIALRAYELHLLGVGADPMENWLRAERELVAAA*
Ga0075422_105054171	3300006196	Populus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVGVA*
Ga0075424_1005669362	3300006904	Populus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPASVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0075436_1008405151	3300006914	Populus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPASVSHEQIALRAYELHLLGAGADPMENWLRAERELV
Ga0105240_112762261	3300009093	Corn Rhizosphere	GHRTIDQGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0111539_101320783	3300009094	Populus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIRPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0111539_109792182	3300009094	Populus Rhizosphere	MPKESTAAKPTAAKRVRRAVKPAARKRAAAPAPVTHEQIALRAYELYVAGAGADPLNNWLRAERELVTA*
Ga0111539_125214871	3300009094	Populus Rhizosphere	MPRSTPAETTADEPRPKRARRIVRRRRAAAPAPVTHEQIALRAYELHLLGAGADPMENWLRA
Ga0105245_121936161	3300009098	Miscanthus Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPVPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0105247_101903402	3300009101	Switchgrass Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAA*
Ga0105243_116240732	3300009148	Miscanthus Rhizosphere	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0075423_108613991	3300009162	Populus Rhizosphere	RRSSAAPREPLVSTRIRRDPGHRTTDQGAPTMPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0105241_104720642	3300009174	Corn Rhizosphere	MPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAT*
Ga0105242_119187522	3300009176	Miscanthus Rhizosphere	TSTAKRVRRAVKPTARKRRAAPAPVTHEQIALRAYELHLLGAGADPMENWLRAERELVSA
Ga0105237_125195471	3300009545	Corn Rhizosphere	RAQHNRARRSSAAPREPLVSTRIRRDPGHCTTDQGAPTMPKTTKTADETPQPRVRRARRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0105238_119157451	3300009551	Corn Rhizosphere	MPKTTAKTADETPQPRVRRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0134125_108841412	3300010371	Terrestrial Soil	MPRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGAGADPMENWLR
Ga0105239_120204951	3300010375	Corn Rhizosphere	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELV
Ga0134126_111851751	3300010396	Terrestrial Soil	DETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0134121_103265662	3300010401	Terrestrial Soil	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0164298_103521641	3300012955	Soil	MPKTTAKTADKTTDETPQPRVRRSRRAVKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVQAA*
Ga0164299_115242251	3300012958	Soil	TRVRRGQGHRTTEQGAPTMPKTTAKTADKTADETPQPRVRRPRRAVKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVQAA*
Ga0164301_111329892	3300012960	Soil	MPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRASASAPVSHEQIALRAYELHLLGVGADPMENWLRAE
Ga0164309_105801651	3300012984	Soil	MPKTTAKTADTTADETPQPRVRRTRRAVKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVQAA*
Ga0164304_103939511	3300012986	Soil	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVQAA*
Ga0164307_116007082	3300012987	Soil	ETPQPRVRRTRGAVKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVQAA*
Ga0164305_100657982	3300012989	Soil	MPKTTAKTADKTTDETPQPRVRRTRRAVKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0163162_120644612	3300013306	Switchgrass Rhizosphere	MPKDSTATKATATKRVRRAVKPSARKRAAAPAPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA*
Ga0157375_130203262	3300013308	Miscanthus Rhizosphere	MPKTTAKTADETPQPRVRRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVAAA*
Ga0157379_101818441	3300014968	Switchgrass Rhizosphere	MPKTTARTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA*
Ga0173483_107836912	3300015077	Soil	MPKDTTATKATATKRVRRAVKPSARRRAAAPEPVTHEQIALRAYELHLLGAGVDPMDNWLRAERELVSA*
Ga0132257_1032037932	3300015373	Arabidopsis Rhizosphere	MPKTTAKTTDETPQPRLRRTRRAVKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVE
Ga0163161_111395272	3300017792	Switchgrass Rhizosphere	MPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0163161_113193991	3300017792	Switchgrass Rhizosphere	MPKDTTATKATATKRVRRAVKPSARRRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA
Ga0206354_101959642	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MPRSTPAETTADEPRPKRTRRLVRRRRAAAPAPVTHEQIALRAYELHLLGAGADPMENWLKAERELVAA
Ga0206354_115189241	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	AQEFRRAGRTPRVDPVRRDPGHRTIDQGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0247794_103479111	3300024055	Soil	MPRSTPAETTADEPRPKRTRRIVRRRRAAAPAPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA
Ga0207656_100585902	3300025321	Corn Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207692_101100202	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VPGEPPVSTRVRRGPGHRTTDQGAPTMPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRAAASAPVSHEQIALRAYELHLLAVGADPMENWLRAERELVAAA
Ga0207642_101281582	3300025899	Miscanthus Rhizosphere	MPRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGQGRDPMENWLRAERELVSA
Ga0207710_101768081	3300025900	Switchgrass Rhizosphere	MPKTTKTADETRQPRVRRTRRAIRPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207647_104851311	3300025904	Corn Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELV
Ga0207662_106919302	3300025918	Switchgrass Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRGAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207662_111442961	3300025918	Switchgrass Rhizosphere	HRTIDQGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207657_100481134	3300025919	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207659_108323731	3300025926	Miscanthus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIRPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207687_107255672	3300025927	Miscanthus Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPVPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207687_119321581	3300025927	Miscanthus Rhizosphere	PRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGQGRDPMENWLRAERELVSA
Ga0207690_107447632	3300025932	Corn Rhizosphere	MPKTTAMTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207669_105230211	3300025937	Miscanthus Rhizosphere	MPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0207665_109266101	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0207691_101644052	3300025940	Miscanthus Rhizosphere	MPKTTAKTADETPRPRDRRTRRAVKPSLRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207711_105317741	3300025941	Switchgrass Rhizosphere	CTTDQGAPTMPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207712_118565842	3300025961	Switchgrass Rhizosphere	EPLVSTRIRRDPGHRTTDQGAPTMPKTTKTADETPQRRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207640_104400672	3300025981	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRGAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0207640_110482971	3300025981	Corn Rhizosphere	LRNITTRAGVPSPRAKHGVVRVRRVPDICASEQGAPTMPRNTATKTTDEAPRAKRTRRITKPAGRKRLAEPRPVSHEQIALRAYELHLLGQGRDPMENWLRAERELVSA
Ga0207640_114766822	3300025981	Corn Rhizosphere	PVRRDPGHRTIDQGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207677_102605872	3300026023	Miscanthus Rhizosphere	MPKTTAKTADETPQPGVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207703_117520471	3300026035	Switchgrass Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEA
Ga0207702_109336822	3300026078	Corn Rhizosphere	MPKTTARTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207641_118031222	3300026088	Switchgrass Rhizosphere	MPKTTKTADETPQPRVRRARRAIKPSSRKRGAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0207648_102621682	3300026089	Miscanthus Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGQGRDPMENWLRAERELVSA
Ga0207674_107677982	3300026116	Corn Rhizosphere	MPKTTKTADETPQPRVRRTRRAIKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0207675_1005365512	3300026118	Switchgrass Rhizosphere	MPKDSTATKATATKRVRRAVKPSARKRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA
Ga0209326_10052362	3300026899	Forest Soil	MPKTTRKTADLPADETPQPRVRRTRRVVKPTARKRAAAPDPVTHDQIALRAYELHMLGVGADPMENWLRAERELVGAA
Ga0268266_110490612	3300028379	Switchgrass Rhizosphere	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVAAA
Ga0247828_100579032	3300028587	Soil	GPVRRDPGHRTIDQGAPTMPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0247818_110492301	3300028589	Soil	MPKTTAKTADETPQPRVRRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAEQV
Ga0247818_113133772	3300028589	Soil	MPKTTAKTADETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAEQVQ
Ga0247822_103491082	3300028592	Soil	MPKTTAKTAEETPQPRVRRTRRALKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0247822_106457651	3300028592	Soil	MPRTTTAKTADEAPRAKRTRRLTKPASRRRLAEARPVSHEQIALRAYELHLLGEGTDPMENWLRAERELVSV
Ga0247822_113006952	3300028592	Soil	MPKDTTATKATATKRVRRAVKPGARKRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA
Ga0307276_100181972	3300028705	Soil	MPKEATTAKTSAAKRVRRAVKPAARKRTAAPAPISHEQIALRAYELHLLGAGADPMDNWLRAERELVSA
Ga0247826_100567971	3300030336	Soil	MPKDTTATKATATKRVRRAVKPSARKRAAAPEPVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSA
Ga0307506_102062221	3300031366	Soil	VPGEPPVSTRVRRGPGHRTTDQGAPTMPKTTAKTADKTADETPQPRVRRTRRAVKPSARKRAAASAPVSHEQIALRAYELHLLGVGADPMENWLRAERELVAAA
Ga0310887_105098732	3300031547	Soil	MPKTTAKTADEAPQPRARRTRRAMKPSSRKRAAAPALVSHEEIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0310892_106223372	3300031858	Soil	MPKTTAKTADETPQPRMRRARRAVKPSSRKRAAAPAPVSHEQIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0307406_109639651	3300031901	Rhizosphere	MPKDTTAAKTNTAKRVRRAVRPSARKRAAAPPPVTHEQIALRAYELHLHGAGADPMENWLRAERELVSA
Ga0308175_1009732782	3300031938	Soil	MPKDTAATKATATNRVRRAIKPRARKRAAAPEHVTHEQIALRAYELHLHGAGADPMDNWLRAERELVSV
Ga0308176_123249082	3300031996	Soil	MPKDTAATKATATNRVRRAIKPRARKRAAAPEHVTHEQIALRAYELHLLGAGSDPMDNWLRAERELVSA
Ga0310906_111032871	3300032013	Soil	SSSVKTGADEPRPKRTRRIVKPGSRRRAAAAAPVTHEQIALRAYELHLLGEGSDPMENWLKAERELVAA
Ga0307470_105426181	3300032174	Hardwood Forest Soil	QEFRRAGRTPRVDPVRRDPGHRTIDQGAPTMPKTTAKTADETPQPRARRTRRAMKPSSRKRAAAPAPVSHEEIALRAYELHLLGAGADPMENWLRAERELVEAA
Ga0372943_0737792_464_649	3300034268	Soil	RNTTAKRVRRAVKPGARKRTAAPAPITHEQIALRAYELHLLGAGADPMDNWLRAERELVS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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