Metagenome / Metatranscriptome Family F074062

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074062
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	98 residues
Representative Sequence	MAVAVLVSLCTAACSSGAAAPQAQQLTLWSGIAAEFTNDLIKRFNNALPQTHINLQTTAGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIER
Number of Associated Samples	107
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.81 %
% of genes near scaffold ends (potentially truncated)	85.83 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.167 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.14% β-sheet: 19.83% Coil/Unstructured: 57.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13620	CarboxypepD_reg	8.33
PF07883	Cupin_2	5.00
PF16868	NMT1_3	0.83
PF01436	NHL	0.83
PF13822	ACC_epsilon	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.17 %
Unclassified	root	N/A	36.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	35.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.33 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.83 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	35.83 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.83 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	35.83 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.83 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	35.83 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.83 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	35.83 %
Oscillospiraceae incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.83 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	35.83 %
[Clostridium] sporosphaeroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.83 %
Gordonia rubripertincta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rubripertincta	0.83 %
Meiothermus cerbereus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus cerbereus	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	35.83 %
[Clostridium] sporosphaeroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	3.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Streptomyces sp. Amel2xB2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xB2	0.83 %
Gordonia rubripertincta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rubripertincta	0.83 %
Meiothermus cerbereus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus cerbereus	0.83 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2161435	Not Available	694	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10813904	Not Available	631	Open in IMG/M
3300000956\|JGI10216J12902_101429425	All Organisms → cellular organisms → Bacteria → Acidobacteria	1174	Open in IMG/M
3300000956\|JGI10216J12902_105796899	Not Available	624	Open in IMG/M
3300000956\|JGI10216J12902_107959327	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300004480\|Ga0062592_101222923	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300005327\|Ga0070658_11748742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xB2	538	Open in IMG/M
3300005328\|Ga0070676_10742965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	720	Open in IMG/M
3300005331\|Ga0070670_101738414	Not Available	574	Open in IMG/M
3300005333\|Ga0070677_10754306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus → Meiothermus cerbereus	552	Open in IMG/M
3300005340\|Ga0070689_100191722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1664	Open in IMG/M
3300005344\|Ga0070661_101299858	Not Available	610	Open in IMG/M
3300005353\|Ga0070669_101386240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	610	Open in IMG/M
3300005355\|Ga0070671_100914692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	767	Open in IMG/M
3300005356\|Ga0070674_101301800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	648	Open in IMG/M
3300005356\|Ga0070674_101842577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	549	Open in IMG/M
3300005364\|Ga0070673_101189089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	714	Open in IMG/M
3300005365\|Ga0070688_100451010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300005367\|Ga0070667_101121065	Not Available	736	Open in IMG/M
3300005437\|Ga0070710_10721474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300005456\|Ga0070678_100960548	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005471\|Ga0070698_101646983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	594	Open in IMG/M
3300005545\|Ga0070695_100372941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1075	Open in IMG/M
3300005616\|Ga0068852_102160862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	578	Open in IMG/M
3300005617\|Ga0068859_100983024	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300005719\|Ga0068861_102588915	Not Available	511	Open in IMG/M
3300005836\|Ga0074470_10007857	Not Available	511	Open in IMG/M
3300005842\|Ga0068858_101717540	Not Available	620	Open in IMG/M
3300005843\|Ga0068860_100821047	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005843\|Ga0068860_101164503	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005843\|Ga0068860_102811171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	505	Open in IMG/M
3300006163\|Ga0070715_10867820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rubripertincta	553	Open in IMG/M
3300006574\|Ga0074056_10553414	Not Available	532	Open in IMG/M
3300006846\|Ga0075430_100337591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1245	Open in IMG/M
3300006853\|Ga0075420_101249447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillospiraceae incertae sedis → [Clostridium] sporosphaeroides	638	Open in IMG/M
3300006894\|Ga0079215_10877718	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006904\|Ga0075424_100095682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3127	Open in IMG/M
3300006904\|Ga0075424_100438069	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300006953\|Ga0074063_13778640	Not Available	654	Open in IMG/M
3300007004\|Ga0079218_10939039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	856	Open in IMG/M
3300009100\|Ga0075418_12615915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	551	Open in IMG/M
3300009147\|Ga0114129_10526858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1540	Open in IMG/M
3300009176\|Ga0105242_12156592	Not Available	602	Open in IMG/M
3300009789\|Ga0126307_11392736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	568	Open in IMG/M
3300010398\|Ga0126383_11768480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	707	Open in IMG/M
3300010399\|Ga0134127_10285647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1581	Open in IMG/M
3300010400\|Ga0134122_12289618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	585	Open in IMG/M
3300010403\|Ga0134123_11563722	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300010403\|Ga0134123_13081108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	535	Open in IMG/M
3300012208\|Ga0137376_11536100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	557	Open in IMG/M
3300012212\|Ga0150985_121115542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300012499\|Ga0157350_1028659	Not Available	606	Open in IMG/M
3300012976\|Ga0134076_10272983	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300013102\|Ga0157371_10104110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2014	Open in IMG/M
3300013297\|Ga0157378_11896403	Not Available	645	Open in IMG/M
3300013308\|Ga0157375_10188745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2215	Open in IMG/M
3300013308\|Ga0157375_13474698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	524	Open in IMG/M
3300014968\|Ga0157379_10985367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	803	Open in IMG/M
3300014968\|Ga0157379_12335062	Not Available	533	Open in IMG/M
3300017792\|Ga0163161_10411885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1086	Open in IMG/M
3300018028\|Ga0184608_10328332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	672	Open in IMG/M
3300018084\|Ga0184629_10665346	Not Available	527	Open in IMG/M
3300018422\|Ga0190265_11034337	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300018466\|Ga0190268_10428256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	865	Open in IMG/M
3300018476\|Ga0190274_10504892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1210	Open in IMG/M
3300018476\|Ga0190274_10673403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1074	Open in IMG/M
3300019361\|Ga0173482_10107139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1024	Open in IMG/M
3300019377\|Ga0190264_11957780	Not Available	535	Open in IMG/M
3300021476\|Ga0187846_10268074	Not Available	708	Open in IMG/M
3300021861\|Ga0213853_10190480	Not Available	577	Open in IMG/M
3300023073\|Ga0247744_1107554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	503	Open in IMG/M
3300023102\|Ga0247754_1130581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	618	Open in IMG/M
3300025290\|Ga0207673_1034501	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300025893\|Ga0207682_10615978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	511	Open in IMG/M
3300025898\|Ga0207692_10925188	Not Available	574	Open in IMG/M
3300025908\|Ga0207643_10373227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	898	Open in IMG/M
3300025926\|Ga0207659_10213869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1547	Open in IMG/M
3300025926\|Ga0207659_10321636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300025932\|Ga0207690_10048495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2825	Open in IMG/M
3300026035\|Ga0207703_10467071	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300026067\|Ga0207678_11609513	Not Available	572	Open in IMG/M
3300026118\|Ga0207675_102100113	Not Available	581	Open in IMG/M
3300026142\|Ga0207698_12288291	Not Available	552	Open in IMG/M
3300027682\|Ga0209971_1092958	Not Available	736	Open in IMG/M
3300027880\|Ga0209481_10180143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1051	Open in IMG/M
3300027907\|Ga0207428_10148447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1786	Open in IMG/M
3300027907\|Ga0207428_10751782	Not Available	695	Open in IMG/M
3300027909\|Ga0209382_10379314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1578	Open in IMG/M
3300028380\|Ga0268265_10623412	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1034	Open in IMG/M
3300028597\|Ga0247820_10692775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	710	Open in IMG/M
3300031544\|Ga0318534_10649465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	598	Open in IMG/M
3300031547\|Ga0310887_10057360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1777	Open in IMG/M
3300031548\|Ga0307408_101950813	Not Available	564	Open in IMG/M
3300031794\|Ga0318503_10267292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	555	Open in IMG/M
3300031910\|Ga0306923_10937079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	946	Open in IMG/M
3300031942\|Ga0310916_10849029	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031945\|Ga0310913_10595340	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300032003\|Ga0310897_10441450	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300032012\|Ga0310902_10060200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1893	Open in IMG/M
3300032013\|Ga0310906_10909242	Not Available	628	Open in IMG/M
3300032059\|Ga0318533_11066780	Not Available	592	Open in IMG/M
3300032261\|Ga0306920_100567250	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300033004\|Ga0335084_10993804	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300033513\|Ga0316628_103873840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.67%
Host-Associated	Host-Associated	47.50%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.50%
Plants	Host-Associated → Plants	47.50%
Aquatic	Environmental → Aquatic	4.17%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.67%
Sediment	Environmental → Aquatic → Sediment	3.33%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.17%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2MG_01003730	2170459018	Switchgrass, Maize And Mischanthus Litter	LTKITAALLVALCTTACTSGAAAPRSQEITLLSGIAASFTNDLIKRFNVALPQTHIQLQASTGGVAVVTSVDK
ICChiseqgaiiDRAFT_21614352	3300000033	Soil	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVY
ICChiseqgaiiFebDRAFT_108139041	3300000363	Soil	MTTSSSRFRSAPCLDIAAVVLALCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVYLAYRRGI
JGI10216J12902_1014294251	3300000956	Soil	MVLLCTAACSSGAAAPQPQQLTLMSGIAAGFSNDLVKRFNSALPETHIELQTAAGGVVVVSAVDGGQGQLGLAQSDVAYLAYRRGIERNLYPHKNLRAI
JGI10216J12902_1057968991	3300000956	Soil	LTTTSSRFRLPSLCAVLLASLCAAACSSGEAAPKPQPLTLASGIAADFSNDLIRRFNRSLPQTQVSLEASPGGVIVVSSVDGGKAQLGLAQSDVVYLAYRRGIEKNLYPHKNL
JGI10216J12902_1079593271	3300000956	Soil	VTTTSSRFPSRRRPGLLSGTSRLATAALLASLCAAACSTPAAAPPPQPLTLWSGIAAGFTNDLIRRFNSSLPQTHINLQATSGGVVVVSAVDSGQGQLGLAQSDVVYLAYRRGIERNLYPHKNL
Ga0062593_1021666562	3300004114	Soil	MTTSSSRFRSAPCLDIAAVVLALCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVY
Ga0063356_1035961872	3300004463	Arabidopsis Thaliana Rhizosphere	VTTTSSGFRPRLCRVAALLVSLCATACSSGAAAPQQQHLTLWSGIAAGFTNDLIKRFNGALPQTHIDLQTAAGGVVVVSAVD
Ga0062595_1026297131	3300004479	Soil	MTTSSSRFRSAPCLDIAAVVLALCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVD
Ga0062592_1012229232	3300004480	Soil	MCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVY
Ga0070658_117487421	3300005327	Corn Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVYLAYRRGIEKNQYPH
Ga0070676_107429652	3300005328	Miscanthus Rhizosphere	LCTAACSSGAAAPRPQQLTLWSGIAAGFTNDLIKRFNSALPDTHIDLQATSGGVVVVSAVDGGQGQLGL
Ga0070670_1017384141	3300005331	Switchgrass Rhizosphere	VTTSSFLCSRVRGWGFATALLISLCTAACTSGAAAPRPEQLTLWSGIAAEFTNDLIRRFNSSLPQTHISLQPTSGGVVAVSAVDGGKGDLGLAQSDVVYL
Ga0070677_107543061	3300005333	Miscanthus Rhizosphere	LLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQLGLAQSDVVYIAYRRGIE
Ga0070689_1001917221	3300005340	Switchgrass Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGEGQLGL
Ga0070661_1012998581	3300005344	Corn Rhizosphere	VLLLLPLCGVACSTGAAAPRPQELTLLSGIAAGFTNDLIKRFNGALPQTHIQLQSSSGGVAVVTSVDKGEGQL
Ga0070669_1013862401	3300005353	Switchgrass Rhizosphere	MAKTSFGFRSRQRRGTAAAALLVALCAACSSGSAAPRAQPLTLWSGIATEFTTDLIQRFNGALGQTHIELRATSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRAI
Ga0070671_1009146921	3300005355	Switchgrass Rhizosphere	LQFPYNPAPLIWRGRAPKTSPWLRSRRRRGIAAALLVSLSAAACSSGAAAPHRQQLTLWSGTAVEFTEDLIQRFNNALPETHLNLQTTSGGVVVVSTVDGGQGDLGLAQADVVYLAYRRGIE
Ga0070674_1013018002	3300005356	Miscanthus Rhizosphere	MSSRFRPRRRPGLATALLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQLGLAQSDVVYIAYRRGIE
Ga0070674_1018425771	3300005356	Miscanthus Rhizosphere	MTRTSSRYRFLCLPGMVVTALFSLCTAACTSGAAAPQSQQLTLWSGIAADFTNDLIKRFNHAIPQTHINLQTAAGGVVVVSAVDSGKGQLGLAQSDVVYLAYRRGIERNQYPHKNL
Ga0070673_1011890891	3300005364	Switchgrass Rhizosphere	MCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVYLAYRRGIESNQYPHKNLRAIAV
Ga0070688_1004510101	3300005365	Switchgrass Rhizosphere	VTTSSFLCSRVRGWGFATALLISLCTAACTSGAAAPRPEQLTLWSGIAAEFTNDLIRRFNSSLPQTHISLQPTSGGVVAVSAVDGGKGDLGLAQSDVVYLAYRRGIEQNQYPH
Ga0070667_1011210651	3300005367	Switchgrass Rhizosphere	LTKIAIALLFSLCTAACTSGAAAPRAQEITLLSGIAAGFTNDLIKRFNTALPQTHIQLTASSGGVAVVTSVDKGEGQL
Ga0070710_107214741	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MATTPSSRYRWFRRPGAVVRFAGTALVSLCAAACTSGSAAPRTEQLKLWSGIAAEFTNDLIQRLNGALPHTHIDLQTTSGGVLVVSAVDSGKGQLGLAQSDVVYRAYRRGIG
Ga0070678_1009605481	3300005456	Miscanthus Rhizosphere	LCTAACSSGAAAPRPQQLTLWSGIAAGFTNDLIKRFNSALPDTHIDLQATSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRA
Ga0068867_1005817892	3300005459	Miscanthus Rhizosphere	MTTTSSRFGNPRFPGVALAVLVSLCAAVCGAACSTGAAAPQAQQLTLWSGIAAGFTNDLIKRFNSALPQTHISLQTAAGGVVVVSAVDGGEGQLGLAQ
Ga0070698_1016469832	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSSRFGSRRPSTIAVLLVSLCATACASGSAAPKSQQLTLWSGIAAGFTNDLIKRFNIALPQTHVGLQTTAGGVVVVSAVDGGQGQLGLAQSDVVYL
Ga0070695_1003729412	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSG
Ga0070695_1013638311	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTSSRFGNPRFPGVALAVLVSLCAAVCGAACSTGAAAPQAQQLTLWSGIAAGFTNDLIKRFNSALPQTHISLQTAAGGVVVVSAVDGGEGQLGL
Ga0068852_1021608621	3300005616	Corn Rhizosphere	MSPRWPATPYVAVLLALLCTTACTSGAAAPRSQEITLLSGIAASFTNDLIKRFNVALPQTHIQLQASTGGVAVVTSVDKGEGQLGLAQSDVTYLAYSRGIEGNKYPH
Ga0068859_1009830242	3300005617	Switchgrass Rhizosphere	LVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQS
Ga0068861_1025889151	3300005719	Switchgrass Rhizosphere	MSSRFPARRNPGLAAALLVSICTAACTSGAAAPRQQQLTLWSGIAADFTNDLIKRFNSALPQTHIGLQSAAGGVVVVSAVDG
Ga0074470_100078571	3300005836	Sediment (Intertidal)	VTTTSSRFRSYARLATVAVLLGSSCASACSSGAAAPPPQTLMLSSGIAADFTADLIRRFNRSLPQTHVDLQTAAGGVVVVSEVDSGHAQLGLAQSDVVYLAYRRGI
Ga0068863_1024660942	3300005841	Switchgrass Rhizosphere	MTTSSSRFRSAPRLDIAAVVLAMCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSD
Ga0068858_1017175402	3300005842	Switchgrass Rhizosphere	LTKTSSRYAAPRSYAAAVLLVSLCTAACTTGAAAPRPQELTLLSGIAASFTNDLIKRFNTALPQTHIQLTASSGGVAVVTSVDKGEGQLGLAQSDVTYLAYRRGIEKNLYPH
Ga0068860_1008210471	3300005843	Switchgrass Rhizosphere	MAKMSFRIRCRRYLSPVAALLVSLCAAACSSGSAAPRRQQLTLWSGIAAEFTTDLIQRFNSTLRETHIDLQATSGGVVVVSAVDSGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRAIAVLW
Ga0068860_1011645031	3300005843	Switchgrass Rhizosphere	LTKTSSRYAAPRSYAAAVLLVSLCTAACTTGAAAPRPQELTLLSGIAASFTNDLIKRFNTALPQTHIQLTASSGGVAVVTSVDKGEGQLGLAQSDVTYLAYRRGIEKNQYPHKNLRAI
Ga0068860_1028111711	3300005843	Switchgrass Rhizosphere	MAQTSFRFRSRRRAATAAVLLVSLCAAACSSGSAAPRAQQLTLWSGIAPEFTNDLIQRFNGALRETHIDLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRAIAVL
Ga0070715_108678201	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MARTPSSRYRSLRRPGAVVLLISLCTAACSSGSAAPRPQQLKLWSGIAAEFTNDLIQRLNGALPHTHIDLQTTSGGVLVVSAVDSGKGQLGLAQSDVVYRA
Ga0074056_105534141	3300006574	Soil	MAKTSSRFRSRRRQGAAAALLISLCATACSSGSAASQPQQLTLWSGTAAEFTNDLIQRFNSALPQTHIDLRTTSGGVVAVSAVDSGQGHLGLAQSDVVYLAYRRGI
Ga0075430_1003375911	3300006846	Populus Rhizosphere	MTSSRRRALRRPAIATLLVSLCTAACSSGAAAPPPQQLTLLSGIAAGFTNDLVKRFNSALPQTHINLQTSAGGVVVVSAVDGGQGQLGLAQSDVV
Ga0075420_1012494471	3300006853	Populus Rhizosphere	VTTTSSRFKAGRRVGGAVSGKPARRRFAISVLLVSLYGASCTSGAAAPQPQQLILWSGIAAGFTNDLIRRFNNALPQTHVNLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRAIAVLWVNT
Ga0079215_108777181	3300006894	Agricultural Soil	VASCFGFSRRLGGVSAALLASLCAAACGSGAAATPPPQQLTLWSGIAAGFTDDLIRRFNIALPQTHVDLRATSGGVVVVSAVDGGQGHLGLAQSDVVYLAYRRGIERNL
Ga0075424_1000956821	3300006904	Populus Rhizosphere	MCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVYLAYRRGIESNQYPHK
Ga0075424_1004380691	3300006904	Populus Rhizosphere	MANTSLRFGSRRRAAAACSLVVSLCSAACSTGSAAPRAQQLTLWSGIATEFTNDLIKGFNAALPQTHIELQTTSGGVIVVSAVDSGQGQLGLAQSDVVYRAYRHGI
Ga0074063_137786401	3300006953	Soil	VLLVALCATACSSGSAASEPQQLTLWSGTAAEFTNDLIQRFNSALPRTHINLQTTAGGTVVVSAVDGGQGHLG
Ga0079218_109390391	3300007004	Agricultural Soil	VASCFGFSRRLGGVSAALLASLCAAACGSGAAATPPPQQLTLWSGIAAGFTDDLIRRFNIALPQTHVDLRATSGGVVVVSAVDGGQGHLGLAQSDVVYLAYRRGIERNLYPHKNL
Ga0111539_109289761	3300009094	Populus Rhizosphere	MTTSSSGPRFATSAAVLIALGTSLCGAAGCSSSAAAPRSQQLTLWSGIAAEFTNDLIKRFNMALPQTHIDLQTAVGGVVVVSAVDGGQGQLGLAQSDVVYLAY
Ga0075418_126159151	3300009100	Populus Rhizosphere	MTTTSSRSRSPRHPGLAAAVLVSLCTAICGAACSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNNALPQTHIDLQTAAGGVVVVSAVDGGEGQLGLAQSDVVYLAYRRGIERNKY
Ga0114129_105268582	3300009147	Populus Rhizosphere	MSGKPASRRFAMACRKPARRRFVFALLLVSLCAACSSGAAAPPPQQLTLWSGIAPAFTSDLIQRFNKAVPQAQIDLQPTSGGVVAVSAVDAGQGQLGLAQS
Ga0105242_121565922	3300009176	Miscanthus Rhizosphere	VTTTSSCSTFRRHTAAALLLVSLCGGACSSGAAAPRSQELTLLSGIAASFTNDLIKRFNVALPQTHIQLKASSGGVAVVSSVDSGEGELGLAQSDVTYLAYRRGIEKNQYPHKN
Ga0126307_113927362	3300009789	Serpentine Soil	MAIAALSSLCVAVCSGAACSSGAAARQPQQLTLWSGIAAGFTNDLIKRLNTALPDTHIGLQPTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRR
Ga0126383_117684801	3300010398	Tropical Forest Soil	MTSFRVRSALLLALCTASCAPPSPPPRPQQLTFWSGIAADFTNDLIRRLNGALPQTHIDLHSTSGGVVVVSAVDQGQGQLGLAQSDVVYIAYRRGIEDNLYPHKNLRAIA
Ga0134127_102856471	3300010399	Terrestrial Soil	MTTTSSRFGNPRFPGVALAVLVSLCAAVCGAACSTGAAAPQAQQLTLWSGIAAGFTNDLIKRFNYALPQTHISLQTAAGGVIVVSAVDGGEGQLGLAQSDVVYLAYRRGIERNLYPHKNL
Ga0134122_122896182	3300010400	Terrestrial Soil	LGAAAALLVSLCAAACTSGAAAPQPQPLTLWSGIAAGFTNGLIQRFNNALPQIHIDLQTTSGGVVVVSAVDSGQGQLGLAQSDVVY
Ga0134123_115637222	3300010403	Terrestrial Soil	VLVSFCASACASGAAAPRAQPLTLWSGIAAGFTNDLIKRFNRALPQTHIDLQTAAGGVVVVSAIDSGQGQLGLAQSDVVYLAYRRGI
Ga0134123_130811081	3300010403	Terrestrial Soil	MAKTSFRFRSRRRAATASVLLVSLCAAACSSGSAAPRAQQLTLWSGIAPEFTNDLIQRFNGALRETHIDLRTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIER
Ga0137452_10521081	3300011441	Soil	MTTTSSGFRSPRLAVAFLVSLFTAACTSGAAAPQSQQLTLWSGIAADFTNDLIKRFNSAIPQTHINLQTAAGG
Ga0137376_115361001	3300012208	Vadose Zone Soil	MATTSSRLSAAALLVTLCAVSCSSRSAAPKPQQLTLWSGIAAEFTNDLIRRFNSALPQTHIDLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRHGIEHNLYPHKNLRAIAVLW
Ga0150985_1211155422	3300012212	Avena Fatua Rhizosphere	LCAACSPSSAAPRAEQLTFWSGSSTEFTSDLIQRFNRALPHTHISLKPAPGGGVAVVSAVDEGKGQLGLAQSDVVYLAYRRR
Ga0157350_10286592	3300012499	Unplanted Soil	LVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVYLAYRRGI
Ga0134076_102729831	3300012976	Grasslands Soil	MAKTSFRFRFRRRPGTAAALLVSLCAAACSSGSAAPRAQQLTLWSGIAAEFTNDLIQRFNIALPQTHINLQTTSGGVVVVSAVDG
Ga0157371_101041101	3300013102	Corn Rhizosphere	LVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVYLAYRRGIEKNQ
Ga0157378_118964031	3300013297	Miscanthus Rhizosphere	LVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSGEGQLGL
Ga0157375_101887451	3300013308	Miscanthus Rhizosphere	LVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDV
Ga0157375_134746981	3300013308	Miscanthus Rhizosphere	MLLVSLCVSACSTGAAAPRPQQLTLWSGIAAGFTNDLIRRFNSSLPQTHINLQPTSGGVVVVSAVDRGEGQLGLAQSDVAYL
Ga0157380_122445221	3300014326	Switchgrass Rhizosphere	MAVAVLVSLCTAVCGVACTSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAV
Ga0157379_109853672	3300014968	Switchgrass Rhizosphere	MAQTSFRFRSRRRAATAAVLLVSLCAAACSSGSAAPRAQQLTLWSGIAPEFTNDLIQRFNGALRETHIDLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNQYPHKNLRAIAVLW
Ga0157379_123350621	3300014968	Switchgrass Rhizosphere	VTTTSSCFTLRRHAAAAALLLVSLCGLACSTGAAAPRPQEIKLLSGIAASFSSDLTKRFNSALPQTHIELTASTGGVAVVTAVDKGEGQLGLAQSDVAYLAYRRGIDKNLYPHKNLRAIA
Ga0163161_104118852	3300017792	Switchgrass Rhizosphere	VAALLSSLCAACTSGAAAPQPQQLTLWSGIAAEFTNDLIQRFNAALPQTRVGLQSTEGGVVVVSAVDSGRGQLGLA
Ga0184608_103283321	3300018028	Groundwater Sediment	MAKTSFRFRSRRCPGTAAALLVSLCAAACSSGSAAPLAQQLTLWSGIAPEFTNDLIQRFNGTLLQTHINLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYP
Ga0184629_106653461	3300018084	Groundwater Sediment	VTTTSSRFRSRRRSSTAAVLLISLCAAACSTGSAAPQPQQLTLWSGIAAEFTNDLINRFNRALPQTHVNLQTAAGGVVVVSAVDGGKGQL
Ga0190265_110343372	3300018422	Soil	MAVAVLVSLCTAACSSGAAAPQAQQLTLWSGIAAEFTNDLIKRFNNALPQTHINLQTTAGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIER
Ga0190268_104282561	3300018466	Soil	MTTTSPRFRSPRLPGLAAALISLCTAACSPGAAAPEPRQLTLWSGIAAEFTNDLIRRFNSALPQTQINLQTAAGGVVVVSAVDGGEGQLGLAQSDVVYLAYRRGIERN
Ga0190274_105048921	3300018476	Soil	VTATSSRFRFRRRPGAVSGKPAARRFAIAVLLASLSAACSPGAAAPQPQQLTLWSGIAPEFTTDLIRRFNRAIPQTHIGLQPTSGGVVAVSAVDGGQGQLGLAQSDVVYLAYRRG
Ga0190274_106734031	3300018476	Soil	MSSRFRPRRRPGLATALLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQLGLAQSDVVYIAYRRGIEKNLYPHKNLRAVAVLW
Ga0173482_101071391	3300019361	Soil	MSSRFRPRRRPGLATALLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQLGLAQSDVVYIAYRRGIEKNLYPHKN
Ga0190264_119577801	3300019377	Soil	VTTTSSRFRSHGRLAIVTALLGSLGAAACSPSAAAPQPQPLSLASGIAADFTNDLIRRFNRSLPQTKVSLQTSAGGVVVVSAVDAGQAELG
Ga0187846_102680742	3300021476	Biofilm	MAKTASRFRSRRRPGTAAALLVSLCAGCSSGAAAPNVKQLTLLSGIAPEFTNELIGRFNSGLHQIHVNLQTTSGGVVVVSAVDSGLGQLG
Ga0213853_101904801	3300021861	Watersheds	MAKTSSRFRSRRRPGTAAALLVSLCAAACSSGSAAPRAQQLTLWSGIAAEFTNDLIQRFNTALPRTHIDLRPTSGGVVVVSAVDGGRGQLGLAQ
Ga0247744_11075541	3300023073	Soil	MSSRFRPRRRPGLATALLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQLGLAQSDVVYIAYRRGI
Ga0247754_11305812	3300023102	Soil	MSSRFRPRRRPGLATALLAALCATACTSGAAAPRPQQLTLWSGIAPGFTNDLIRRFNRELSQAHIDLRPTPGGVVAVSAVDSGEGQ
Ga0207673_10345011	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGE
Ga0207682_106159781	3300025893	Miscanthus Rhizosphere	VTTSSFLCSRVRGWGFATALLISLCTAACTSGAAAPRPEQLTLWSGIAAEFTNDLIRRFNSSLPQTHISLQPTSGGVVAVSAVDGGKGDLGLAQSDVVYLAYRRGIEQN
Ga0207692_109251881	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MATTPSSRYRWFRRPGAVVRFAGTALVSLCAAACTSGSAAPRTEQLKLWSGIAAEFTNDLIQRLNGALPHTHIDLQTTSGGVLVVSAVDSGKGQLGLAQSDVVYRAYRRGIGDNLYPHKN
Ga0207643_103732272	3300025908	Miscanthus Rhizosphere	VTKSSYAAVLLASLCAAACSSGQAAPRAQEIKLLSGIAAGFTTDLVKRFNKGLPQTHITLQSSSGGVAVVSSVDKGEGQLGLAQSDVTYLAYRRGIEKNLYPHKNLRAITVL
Ga0207650_104541041	3300025925	Switchgrass Rhizosphere	VTTTSSGFPSPRRTGIAAALLVSLCVAACTSGAAAPQPHQLTLWSGIAAEFTNDLIKRFNSALPQTHINLQTTAGGVVVVSAVDS
Ga0207659_102138692	3300025926	Miscanthus Rhizosphere	LCTAACSSGAAAPRPQQLTLWSGIAAGFTNDLIKRFNSALPDTHIDLQATSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNL
Ga0207659_103216361	3300025926	Miscanthus Rhizosphere	MCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQSDVVYLAYRRGIER
Ga0207690_100484953	3300025932	Corn Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVYLAYRR
Ga0207703_104670711	3300026035	Switchgrass Rhizosphere	MAQTSFRFRSRRRAATAAVLLVSLCAAACSSGSAAPRAQQLTLWSGIAPEFTNDLIQRFNGALRETHIDLQTTSGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGI
Ga0207678_116095132	3300026067	Corn Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNRALPQTHVGLQPTSGGVVVVS
Ga0207675_1021001131	3300026118	Switchgrass Rhizosphere	MSSRFPARRNPGLAAALLVSICTAACTSGAAAPRQQQLTLWSGIAADFTNDLIKRFNSALPQTHIGLQSAAGGVVVVSAVDGGKGQLGLAQSDVVY
Ga0207698_122882911	3300026142	Corn Rhizosphere	MSPRWPATPYVAVLLALLCTTACTSGAAAPRSQEITLLSGIAASFTNDLIKRFNVALPQTHIQLQASTGGVAVVTSVDKGEGQLGLAQSDVTYLAYSR
Ga0209971_10929582	3300027682	Arabidopsis Thaliana Rhizosphere	VTTTSSRFRRRPGARCRLAIATVLVSLCATACSSGAAATQPQQLTLLSGIAQDFTNDLIQRFNTALPQTHVGLQPTSGGVVVVSAVDSGEGQLGLAQSDVVYLA
Ga0209481_101801432	3300027880	Populus Rhizosphere	MACRKPARRRFVFALLLVSLCAACSSGAAAPPPQQLTLWSGIAPAFTSDLIQRFNKAVPQAQIDLQPTSGGVVAVSAVDAGQGQLGLA
Ga0207428_101484471	3300027907	Populus Rhizosphere	MCALVSGAGCSSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNTALPQTHIDLQTAAGGVVVVSAVDGGKGQLGLAQS
Ga0207428_107517822	3300027907	Populus Rhizosphere	VTRQFATAVLLVSVCAACSSGAAAPEPQQLALWSGIAPEFTNDLIQRFNRTVPQTHISLRPTSGGVVAVSAVDGGQGQLGLAQSDVVYLAYRRGIERNL
Ga0209382_103793141	3300027909	Populus Rhizosphere	LLVSLCATACSSGAAAPQQQHLTLWSGIAAGFTNDLIKRFNGALPQTHIDLQTAAGGVVVVSAVDGGQGQLGLAQSDVVYLAYRRGIERNLYPHKNLRAIAV
Ga0268265_106234121	3300028380	Switchgrass Rhizosphere	MAKPTTSISFRSRRRSGTAAALLVSLCTAACSSGSAAPRAQQLTLWSGIAAEFTNDLIQRFNSGLRETHIDLRTTSGGVVVVSAVDGGQGQLGLAQSD
Ga0247820_106927752	3300028597	Soil	ALLASLCTAACSSGAAAPQPQQLTLWSGIAAGFTNDLIKRFNSALPDTHIGLQSTSGGVVVVSAVDSGQGQLGLAQSDVVYLA
Ga0318534_106494651	3300031544	Soil	MTSFRVRSALLLALCTASCAPQSPPPRPQQLTFWSGIAADFTNDLIRRLNGALPQTHIDLHSTSGGVVVVSAVDQGQGQLGLAQSDVVYIAYRRGIEDNLYPHKNL
Ga0310887_100573602	3300031547	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQPLTLWSGIAADFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVDSGKGQLGLAQSDVVYLAYRRGIVR
Ga0307408_1019508132	3300031548	Rhizosphere	MHWLYAVVLASLAASACSSGQAAPRPQPLTLASGIAADFTADLIRRFNRSLPQTQVSLQASPGGVIVVSSVDGGQAQLGLAQSDVV
Ga0318503_102672921	3300031794	Soil	MATTPSSRFRSLRRPGATALLVSLCTAACTSGSAAPRSQRLTLWSGIAAEFTNDLIRRLNGALPQTHIDLQTTSGGVVVVSAVDDGRGQLGLAQSDVVYIAYRRGIEHNLYPHKNLRAIAVLW
Ga0310907_104053191	3300031847	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVDSGKGQLGL
Ga0310904_100376953	3300031854	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVD
Ga0310893_103574751	3300031892	Soil	MTTTSSRFRPARPRAPRRPGMAVAVLVSLCTAVCGVACTSGAAAPQSQPLTLWSGIAADFTNDLIKRFNNAIPQTHINLQ
Ga0310900_100411613	3300031908	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQPLTLWSGIAADFTNDLIKRFNNAIPQTHINLQTAAGGVV
Ga0306923_109370792	3300031910	Soil	MATTPSSRFRSLRRPGATALLVSLCTAACTSGSAAPRSQRLTLWSGIAAEFTNDLIRRLNGALPQTHIDLQTTSGGVVVVSAVDDGRGQLGLAQSDVVYIA
Ga0310891_100330171	3300031913	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQPLTLWSGIAADFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVDSGKGQLGLAQSDVVYL
Ga0310916_108490291	3300031942	Soil	MATTPSSRFRSLRRPGATALLVSLCTAACTSGSAAPRSQRLTLWSGIAAEFTNDLIRRLNGALPQTHIDLQTTSGGVVVVSAVDDGRGQLGLAQSDVVYIAY
Ga0310913_105953401	3300031945	Soil	VPTTSSRFRSRRPLGAAAALLVSLSGGGCSARAVAPQAQQLTLWYGIAADFTIDLVQRFNSALPQTHIGLRQTSGGVVVVSAVDSGQGQ
Ga0310897_104414501	3300032003	Soil	VTTTSFRPSVRRRPGIAAALLISLFASGCTSGAAAPRQQQLTLWSGIAADFTNDLIKRFNTALPQTHVALQPTGGGVMVVSAVDG
Ga0310902_100602001	3300032012	Soil	MTTTSSGFRSPRLAVAFLVSLCTAVCSAACTSGAAAPQSQPLTLWSGIAADFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVDSGKGQLGLAQSDVVYLAYRRGIERNQYPHKNLRAI
Ga0310906_109092421	3300032013	Soil	MTTTSSRFRPARARAPRLPGMAVAVLVSLCTAVCGVACTSGAAAPQSQQLTLWSGIAAEFTNDLIKRFNNAIPQTHINLQTAAGGVVVVSAVDSGKGQLGLAQSDVVYLAYRR
Ga0318533_110667801	3300032059	Soil	MTSFRVRSALLLALCTASCAPQSPPPRPQQLTFWSGIAADFTNDLIRRLNGALPQTHIDLHSTSGGVVVVSAVDQGQGQLGLAQSDVVYIAYRRGIEDNLYPH
Ga0306920_1005672502	3300032261	Soil	MATTPSSRFRSLRRPGATALLVSLCTAACTSGSAAPRSQRLTLWSGIAAEFTNDLIRRLNGALPQTHIDLQTTSGGVVVVSAVD
Ga0335084_109938041	3300033004	Soil	MAETSSRFRSCRRLATTVALLASLHAAACSSGSAASQPQQLTLWSGTAAEFTNDLIQRFNNALPQTHINLQTTSGGVVVVSAVDGGKG
Ga0316628_1038738401	3300033513	Soil	MAQTSFRFRSRRRPGTAAALLVSLCAAACSSGSAPPRAQQLTLWSGIAAEFTNDLIQRLNTALPQIHIGLQPTSGGVVVVSAVDSGQGQLGLAQSDVVYLAYRRGIEHNLYPHKNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences