Metagenome / Metatranscriptome Family F074061

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	42 residues
Representative Sequence	MLIGVAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR
Number of Associated Samples	102
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.00 %
% of genes near scaffold ends (potentially truncated)	20.83 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.333 % of family members)
Environment Ontology (ENVO)	Unclassified (32.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01979	Amidohydro_1	5.83
PF13396	PLDc_N	5.00
PF08241	Methyltransf_11	5.00
PF02861	Clp_N	5.00
PF12680	SnoaL_2	4.17
PF13545	HTH_Crp_2	2.50
PF08044	DUF1707	2.50
PF01872	RibD_C	1.67
PF14588	YjgF_endoribonc	1.67
PF12867	DinB_2	1.67
PF13649	Methyltransf_25	1.67
PF01638	HxlR	1.67
PF06742	DUF1214	1.67
PF13489	Methyltransf_23	1.67
PF12697	Abhydrolase_6	0.83
PF02687	FtsX	0.83
PF00484	Pro_CA	0.83
PF12900	Pyridox_ox_2	0.83
PF01061	ABC2_membrane	0.83
PF00589	Phage_integrase	0.83
PF05901	Excalibur	0.83
PF00378	ECH_1	0.83
PF08327	AHSA1	0.83
PF07501	G5	0.83
PF01184	Gpr1_Fun34_YaaH	0.83
PF00027	cNMP_binding	0.83
PF00440	TetR_N	0.83
PF09992	NAGPA	0.83
PF13359	DDE_Tnp_4	0.83
PF13432	TPR_16	0.83
PF00196	GerE	0.83
PF00106	adh_short	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	5.00
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.67
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.67
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.67
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.67
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	1.67
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.83
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.50 %
Unclassified	root	N/A	35.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.67 %
Unclassified	root	N/A	35.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.33 %
Unclassified	root	N/A	35.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.17 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.67 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	8.33 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	8.33 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	3.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.67 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	8.33 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	3.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.50 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.67 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_161500	Not Available	546	Open in IMG/M
3300000567\|JGI12270J11330_10039907	Not Available	2638	Open in IMG/M
3300001356\|JGI12269J14319_10048045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2580	Open in IMG/M
3300004091\|Ga0062387_100143741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1363	Open in IMG/M
3300004479\|Ga0062595_100402095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	982	Open in IMG/M
3300004479\|Ga0062595_100511001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	906	Open in IMG/M
3300005334\|Ga0068869_101860377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	539	Open in IMG/M
3300005338\|Ga0068868_100319729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1322	Open in IMG/M
3300005434\|Ga0070709_10567021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300005435\|Ga0070714_100009759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7564	Open in IMG/M
3300005435\|Ga0070714_100248911	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005435\|Ga0070714_100877582	All Organisms → cellular organisms → Bacteria → Terrabacteria group	870	Open in IMG/M
3300005435\|Ga0070714_101133593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	762	Open in IMG/M
3300005436\|Ga0070713_101138733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300005436\|Ga0070713_101565974	Not Available	639	Open in IMG/M
3300005437\|Ga0070710_10095184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1763	Open in IMG/M
3300005437\|Ga0070710_11389352	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300005536\|Ga0070697_102042587	Not Available	513	Open in IMG/M
3300005541\|Ga0070733_10309048	Not Available	1045	Open in IMG/M
3300005548\|Ga0070665_100792390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300005553\|Ga0066695_10269146	Not Available	1076	Open in IMG/M
3300005615\|Ga0070702_101528483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	550	Open in IMG/M
3300006028\|Ga0070717_11114875	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300006032\|Ga0066696_10648373	Not Available	682	Open in IMG/M
3300006046\|Ga0066652_100462904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1170	Open in IMG/M
3300006163\|Ga0070715_10893911	Not Available	546	Open in IMG/M
3300006174\|Ga0075014_100186383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300006354\|Ga0075021_10336276	All Organisms → cellular organisms → Bacteria → Terrabacteria group	940	Open in IMG/M
3300006358\|Ga0068871_100888143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300006573\|Ga0074055_11848887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1211	Open in IMG/M
3300006804\|Ga0079221_11589263	Not Available	529	Open in IMG/M
3300006806\|Ga0079220_10204626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300006914\|Ga0075436_100546430	Not Available	850	Open in IMG/M
3300009101\|Ga0105247_10395501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	983	Open in IMG/M
3300009137\|Ga0066709_101712300	All Organisms → cellular organisms → Bacteria → Terrabacteria group	890	Open in IMG/M
3300009551\|Ga0105238_10470358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1255	Open in IMG/M
3300009553\|Ga0105249_10868260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	968	Open in IMG/M
3300009553\|Ga0105249_11183802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	835	Open in IMG/M
3300009824\|Ga0116219_10215225	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300009839\|Ga0116223_10445201	Not Available	758	Open in IMG/M
3300010376\|Ga0126381_104292281	Not Available	552	Open in IMG/M
3300010379\|Ga0136449_100104290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5798	Open in IMG/M
3300011120\|Ga0150983_13875407	Not Available	748	Open in IMG/M
3300012198\|Ga0137364_10957695	Not Available	648	Open in IMG/M
3300012200\|Ga0137382_10106478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1857	Open in IMG/M
3300012200\|Ga0137382_10369132	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1008	Open in IMG/M
3300012208\|Ga0137376_10342284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300012929\|Ga0137404_10136854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	2023	Open in IMG/M
3300013105\|Ga0157369_10628693	Not Available	1108	Open in IMG/M
3300013297\|Ga0157378_10857842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	937	Open in IMG/M
3300013307\|Ga0157372_11418511	Not Available	800	Open in IMG/M
3300015264\|Ga0137403_10385463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1283	Open in IMG/M
3300016270\|Ga0182036_10630536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300017937\|Ga0187809_10276842	All Organisms → cellular organisms → Bacteria → Terrabacteria group	613	Open in IMG/M
3300018433\|Ga0066667_10676704	Not Available	864	Open in IMG/M
3300018482\|Ga0066669_12301943	Not Available	514	Open in IMG/M
3300020581\|Ga0210399_10138800	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300020582\|Ga0210395_10530036	Not Available	886	Open in IMG/M
3300021170\|Ga0210400_11303606	Not Available	582	Open in IMG/M
3300021180\|Ga0210396_11751943	Not Available	503	Open in IMG/M
3300021478\|Ga0210402_10029541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4734	Open in IMG/M
3300022467\|Ga0224712_10233719	Not Available	845	Open in IMG/M
3300022525\|Ga0242656_1072044	Not Available	635	Open in IMG/M
3300024176\|Ga0224565_1034203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300024347\|Ga0179591_1028812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1744	Open in IMG/M
3300025905\|Ga0207685_10484252	Not Available	649	Open in IMG/M
3300025906\|Ga0207699_10375181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300025916\|Ga0207663_10260141	Not Available	1281	Open in IMG/M
3300025924\|Ga0207694_10302104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1318	Open in IMG/M
3300025927\|Ga0207687_10306959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1280	Open in IMG/M
3300025927\|Ga0207687_11703133	Not Available	540	Open in IMG/M
3300025929\|Ga0207664_11226274	Not Available	668	Open in IMG/M
3300025961\|Ga0207712_10926524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	771	Open in IMG/M
3300027497\|Ga0208199_1065250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300027568\|Ga0208042_1000512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13121	Open in IMG/M
3300027775\|Ga0209177_10003592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3032	Open in IMG/M
3300027894\|Ga0209068_10142681	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1291	Open in IMG/M
3300028379\|Ga0268266_11521309	Not Available	645	Open in IMG/M
3300028718\|Ga0307307_10164940	Not Available	695	Open in IMG/M
3300028881\|Ga0307277_10105010	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300029999\|Ga0311339_10280426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1808	Open in IMG/M
3300030494\|Ga0310037_10029826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2623	Open in IMG/M
3300030740\|Ga0265460_13004458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300030741\|Ga0265459_14096391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300031543\|Ga0318516_10720596	Not Available	566	Open in IMG/M
3300031544\|Ga0318534_10559717	Not Available	651	Open in IMG/M
3300031561\|Ga0318528_10231670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	990	Open in IMG/M
3300031564\|Ga0318573_10116150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300031708\|Ga0310686_117529515	Not Available	549	Open in IMG/M
3300031718\|Ga0307474_10753801	Not Available	770	Open in IMG/M
3300031747\|Ga0318502_10975387	Not Available	516	Open in IMG/M
3300031778\|Ga0318498_10358998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300031910\|Ga0306923_10432451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1495	Open in IMG/M
3300031910\|Ga0306923_10910292	Not Available	963	Open in IMG/M
3300031910\|Ga0306923_11089769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300032009\|Ga0318563_10126384	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300032043\|Ga0318556_10165678	Not Available	1144	Open in IMG/M
3300032055\|Ga0318575_10407770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300032068\|Ga0318553_10126523	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300032068\|Ga0318553_10462731	Not Available	664	Open in IMG/M
3300032089\|Ga0318525_10091000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1549	Open in IMG/M
3300032090\|Ga0318518_10337229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300032091\|Ga0318577_10167573	Not Available	1048	Open in IMG/M
3300032160\|Ga0311301_10062098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8130	Open in IMG/M
3300032180\|Ga0307471_100575711	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300032261\|Ga0306920_102834803	Not Available	659	Open in IMG/M
3300032770\|Ga0335085_10084674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4149	Open in IMG/M
3300032770\|Ga0335085_10526458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1344	Open in IMG/M
3300032770\|Ga0335085_10885681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300032770\|Ga0335085_11617291	Not Available	670	Open in IMG/M
3300032783\|Ga0335079_10282736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1815	Open in IMG/M
3300032829\|Ga0335070_10322680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1491	Open in IMG/M
3300032954\|Ga0335083_10031688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5874	Open in IMG/M
3300032954\|Ga0335083_10041315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4997	Open in IMG/M
3300032955\|Ga0335076_10178391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2032	Open in IMG/M
3300033134\|Ga0335073_10219225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2346	Open in IMG/M
3300033134\|Ga0335073_11167204	Not Available	777	Open in IMG/M
3300033158\|Ga0335077_10121467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3037	Open in IMG/M
3300033158\|Ga0335077_11277349	Not Available	714	Open in IMG/M
3300034163\|Ga0370515_0132713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.83%
Host-Associated	Host-Associated	14.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.67%
Plants	Host-Associated → Plants	14.17%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.67%
Sediment	Environmental → Aquatic → Sediment	2.50%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Peat	Environmental → Terrestrial → Peat	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02974030	2199352024	Soil	MLIGVTVVAVRMHDYNGPYASAITLGIIALIVLILVGVYSRKSR
JGI12270J11330_100399072	3300000567	Peatlands Soil	MLTGIAVVAVGMHGYNGPGAFVITLAVPALIVLILVGVYGRRKR*
JGI12269J14319_100480453	3300001356	Peatlands Soil	MLTGIAVVAVGMHGYNGPGASVITLAVPALIVLILVGVYGRRKR*
Ga0062387_1001437412	3300004091	Bog Forest Soil	MLIGVAVVAVGMHGYNGPGAMVITLAVPALIVLILVGVYGRRKR*
Ga0062595_1004020952	3300004479	Soil	MLIGVAVVAVGMHDYNGPDASVITFGIVALIVLILAGVYGRRNR*
Ga0062595_1005110011	3300004479	Soil	MLIGVAVVAVGMHDYNGPEASAITLGIVVLIVLILVGVYARRNR*
Ga0068869_1018603771	3300005334	Miscanthus Rhizosphere	GVDVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0068868_1003197291	3300005338	Miscanthus Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0070709_105670211	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVALIVLILIGVYGRRNR*
Ga0070714_1000097592	3300005435	Agricultural Soil	MLIGIAVVAMGHDYNGPGASAITLGIVALIVLILAGVYGRKSR*
Ga0070714_1002489112	3300005435	Agricultural Soil	MLIGVAVGIHGYNGPGASVFVFGTVALIVLILVAVYRPRKRR*
Ga0070714_1008775821	3300005435	Agricultural Soil	MLIGVAVGIHGYDGPGASVFVFGTVALIVLILVAVYRPRKRR*
Ga0070714_1011335932	3300005435	Agricultural Soil	MLIGVAVVAVGMHDYNSPDASAITLGIVALIVLILIGVYGRRNR*
Ga0070713_1011387331	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGGVVAMGHDYNGPGASAITLGIVALIVLILAGVYGRKNR*
Ga0070713_1015659743	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLGWSTVMLIGVAVGIHGYDGPGASVFVFGTVALIVLILVAVYRPRRRR*
Ga0070710_100951844	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGTAVVAVGMHDYNGPDASAITLGIVALIVLILIGVYGRRNR*
Ga0070710_113893522	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGVAVGIHGYDGPGASVFVFGTVALIVLILVAVYRPRRRR*
Ga0070697_1020425872	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGVAVVAVGMHDYNGPYASAITLGIIALIVLILVRVYARKNR*
Ga0070733_103090481	3300005541	Surface Soil	MLIGVAVGMHGYNGPGAVVITLGVPVLLVLILVAVYGRRKR*
Ga0070665_1007923902	3300005548	Switchgrass Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIALILVGVYARRNR*
Ga0066695_102691463	3300005553	Soil	MLIGVPVVAVGMHDYNGPYASAITFGIIALIVLILVGVYGRKNR*
Ga0070702_1015284832	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARR
Ga0070717_111148751	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGIAVVAMGHEYNGPGASAIALGIVALIVLILAGVYGRKSR*
Ga0066696_106483731	3300006032	Soil	VAMGHDYNGLGASAVTLGIVGLIVLILAGVYGRKNR*
Ga0066652_1004629041	3300006046	Soil	IAVVAMGHDYNGLGASAVTLGIVGLIVLILAGVYGRKNR*
Ga0070715_108939111	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGTAVVAGGMHDYNGPDASAITLGIVALIVLILIGVYGRRNR*
Ga0075014_1001863833	3300006174	Watersheds	VMLIGVAVVAVGMHGYNGPGAMVITLAVPALIVLILVGVYGRRKR*
Ga0075021_103362762	3300006354	Watersheds	MLIGVAVGIHDYTGPGASAITLGIIALIVLILVGVFARGKR*
Ga0068871_1008881431	3300006358	Miscanthus Rhizosphere	GMHDYNGPDASAITLGIVALIVLILIGVYGRRNR*
Ga0074055_118488872	3300006573	Soil	MLIGVTAVAMGMHDYNGPYASAITLGIIALIVLILMGVYGRKTGNQPRS*
Ga0079221_115892632	3300006804	Agricultural Soil	MPIGVAVVASRMHDYTGPYASAITLGIIALIVLILVGVYGRKSR*
Ga0079220_102046262	3300006806	Agricultural Soil	MPIGMAVVAMGHDYNGPGASAITLGIVALIVLILAGVYGRKSR*
Ga0075436_1005464301	3300006914	Populus Rhizosphere	MLIGVAVEYMAYNGPGASVFVFGTVALIVLILVAVYRPRKRR*
Ga0105247_103955012	3300009101	Switchgrass Rhizosphere	MLIGVAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0066709_1017123001	3300009137	Grasslands Soil	MLIGVGVVAVGMHDYNGPGASVITLGIIALIVLILVAVYRPRKR*
Ga0105238_104703581	3300009551	Corn Rhizosphere	MPIGTAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0105249_108682602	3300009553	Switchgrass Rhizosphere	MLIGTAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0105249_111838021	3300009553	Switchgrass Rhizosphere	MLIGVDVVAVGTHAYNGPDASAITLGIVVLIVLILVGVYARRNR*
Ga0116219_102152251	3300009824	Peatlands Soil	MLIGVAVVAVGMHGYNGPGAMVITLAVPALIVLILVTVYGRRKR*
Ga0116223_104452011	3300009839	Peatlands Soil	AVVAVGMHGYNGPGASVITLAVPALIVLILVGVYGRRKR*
Ga0126381_1042922812	3300010376	Tropical Forest Soil	MLIGVAVGMRGYNGPGALVITLGVPVPLVLILLAVYGRRNRRSR*
Ga0136449_1001042903	3300010379	Peatlands Soil	MLVGVAVGMHGYNGPGAMVITLAVPALIVLILVTVYGRRKR*
Ga0150983_138754072	3300011120	Forest Soil	MLIGVAVGIHSYNGPGASVFVFGTVALIVLILVAVYRPRKRR*
Ga0137364_109576952	3300012198	Vadose Zone Soil	MLIGIAVVAMGHDYNGLGASAVTLGIVGLIVLILAGVYGRKNR*
Ga0137382_101064782	3300012200	Vadose Zone Soil	MLIGVAVVAGRMHDYNGPYASAITLGIIALIVLILIGVYGRKSR*
Ga0137382_103691322	3300012200	Vadose Zone Soil	MLIGVGVVAVGMHDYNGPGASVITLGIIALIVLILVAVYRPGKR*
Ga0137376_103422843	3300012208	Vadose Zone Soil	MLIGVAVVAVRMHDYNGPYDSAITLGIIALIVLILIGVYGRKSR*
Ga0137404_101368543	3300012929	Vadose Zone Soil	MLIGVAVVAVGMHDYNGPYASAITVGITALIVLILVGVYARKNR*
Ga0157369_106286932	3300013105	Corn Rhizosphere	MLIGTAVVAVGIHDYNGPDASAITLGIVALIVLILIGVYGRRNR*
Ga0157378_108578421	3300013297	Miscanthus Rhizosphere	MLIGVAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR
Ga0157372_114185111	3300013307	Corn Rhizosphere	MLIGTAVVAVGMHDYNSPDASAITLGIVALIVLILIGVYGRRNR*
Ga0137403_103854632	3300015264	Vadose Zone Soil	MLIGVAVVAVGMHDYNGPYASAITLGIIALIVLILVGVYARKNR*
Ga0182036_106305363	3300016270	Soil	MLIGVAVGVHDYTGPGASAITLGIIALIVLILIGAYARGNR
Ga0187809_102768422	3300017937	Freshwater Sediment	MLIGVSVGIHDYTGPGASAITLGIIALIVLILVGVFARGKR
Ga0066667_106767041	3300018433	Grasslands Soil	MLIGIAVVAMGHDYNGLGASAVTLGIVGLIVLILAGVYGRKNR
Ga0066669_123019432	3300018482	Grasslands Soil	MLIGIAVVAMGYDYNGLGASAVTLGIVGLIVLILAEVYGRKNG
Ga0210399_101388002	3300020581	Soil	MLIGVAVGIHSYNGPGASVFVFGTVALIVLILVAVYRPRKRR
Ga0210395_105300363	3300020582	Soil	MLIGVAVGIHGYDGPGASVFVFGTVALIVLILVVVYRPRKRR
Ga0210400_113036062	3300021170	Soil	MLIGVPVGIHGYNGPGASVFVFGTVALIVLILVAVYRPRKRR
Ga0210396_117519431	3300021180	Soil	WVAGGIHGYNGPGASVFVFGTVALIVLILVAVYRPRKRR
Ga0210402_100295413	3300021478	Soil	MLIGVAVGIHDYTGPGVSAITLGIIALIVLILVGVFARGKR
Ga0224712_102337192	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIALILVGVYARRNR
Ga0242656_10720441	3300022525	Soil	MLIGVAVGIHSYNGPGASVFVFGTVALIVLILVAGYRPRKRR
Ga0224565_10342032	3300024176	Plant Litter	MLTGVVVLAVGMHGYNGPGALGITIAIPVILVLILVAMYGRKKR
Ga0179591_10288122	3300024347	Vadose Zone Soil	MLIGVPVVAVGMHDYNGRYASAITLGIIALIVLILIGVYGRKSR
Ga0207685_104842522	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGIAVVAMGHDYNGPGASAITLGIVALIVLILIGVYGRRNR
Ga0207699_103751812	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGTAVVAVGMHDYNGPDASAITLGIVALIVLILIGVYGRRNR
Ga0207663_102601412	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGTAVVAVGMHDYNSPDASAITLGIVALIVLILIGVYGRRNR
Ga0207694_103021042	3300025924	Corn Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR
Ga0207687_103069592	3300025927	Miscanthus Rhizosphere	MLIGVDVVAVGMHDYNGPDASAITLGIVVLIVLILVGMYARRNR
Ga0207687_117031331	3300025927	Miscanthus Rhizosphere	MLIGGVVAMGHDYNGPGASAITLGIVALIVLILAGVYGRKNR
Ga0207664_112262741	3300025929	Agricultural Soil	MLIGIAVVAMGHEYNGPGASAIALGIVALIVLILAGVYGRKSR
Ga0207712_109265241	3300025961	Switchgrass Rhizosphere	MPIGTAVVAVGMHDYNGPDASAITLGIVVLIVLILVGVYARRNR
Ga0208199_10652502	3300027497	Peatlands Soil	MLTGIAVVAVGMHGYNGPGAFVITLAVPALIVLILVGVYGRRKR
Ga0208042_10005126	3300027568	Peatlands Soil	MLTGIAVVAVGMHGYNGPGASVITLAVPALIVLILVGVYGRRKR
Ga0209177_100035922	3300027775	Agricultural Soil	MPIGMAVVAMGHDYNGPGASAITLGIVALIVLILAGVYGRKSR
Ga0209068_101426812	3300027894	Watersheds	MLIGVAVGIHDYTGPGASAITLGIIALIVLILVGVFARGKR
Ga0268266_115213091	3300028379	Switchgrass Rhizosphere	MLIGTAVVAVGIHDYNGPDASAITLGIVALIVLILIGVYGRRNR
Ga0307307_101649402	3300028718	Soil	MLIGVAVVAVGMHDYTGPGASAITLGIVGLIVLILVGVYGRKTGNQPRY
Ga0307277_101050103	3300028881	Soil	MLIGVAVVAVGMHDYNGPFASATTLGIIALIVLILIGVYGWKSR
Ga0311339_102804262	3300029999	Palsa	MLIGVAVGMHGYSGPGAMVITLAVPALIVLILVGVYGRRKR
Ga0310037_100298264	3300030494	Peatlands Soil	MLIGVAVVAVGMHGYNGPGAMVITLAVPALIVLILVGVYGRRKR
Ga0265460_130044582	3300030740	Soil	VLAVGMHGYNGPGALGITIAIPVILVLILVAMYGRKKR
Ga0265459_140963911	3300030741	Soil	MGVAVVAMMGHGYNGPGAMVITIAVPVLLVLILVAVYGRKKR
Ga0318516_107205961	3300031543	Soil	MLIGVAVGVHDYTGPGASVITLGIIVLIVLILIGAYARGNR
Ga0318534_105597172	3300031544	Soil	MLIGVAVGVHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0318528_102316703	3300031561	Soil	MLIGVAVGIHDYTGPGASAITLGIIVLIVLILIGAYAR
Ga0318573_101161502	3300031564	Soil	MLIGVAVGIHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0310686_1175295151	3300031708	Soil	MLIGVAVVALGHGYNGPGALVITLAVPALIVLILVAVYGRRKR
Ga0307474_107538012	3300031718	Hardwood Forest Soil	MLIGIAVVAMGHDYNGPGASAITLGIVALIVLILAGMYGRKSR
Ga0318502_109753871	3300031747	Soil	SKVMLIGVAVGIHDYTGPGAPAITLGIIVLIVLILIGAYARGNR
Ga0318498_103589981	3300031778	Soil	MLIGVAVGIHDYTGPGAPAITLGIIVLIVLILIGAYARGNR
Ga0306923_104324511	3300031910	Soil	AVGVHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0306923_109102921	3300031910	Soil	MLIGVAVGVHDYTGPGASAITLGIIALIVLILIGAYVRGNR
Ga0306923_110897691	3300031910	Soil	MLNGVAVGVHDYTGPGASAITLGIIALIVLILVTAYVRGNR
Ga0318563_101263841	3300032009	Soil	MLIGVAVGIHDYTGPGASAITLGIIVLIVLILIGAYA
Ga0318556_101656782	3300032043	Soil	HLGRSKVMLIGVAVGVHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0318575_104077702	3300032055	Soil	MLIGVAVGVHDYTGPGASAITLGIIALIVLILIGAFRRGNR
Ga0318553_101265231	3300032068	Soil	MLIGVAVGIHDYTGPGASAITLGIIVLIVLILIGAY
Ga0318553_104627311	3300032068	Soil	GRSKVMLIGVAVGVHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0318525_100910001	3300032089	Soil	GVAVGVHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0318518_103372291	3300032090	Soil	MLIGVAVGVHDYTGPGASAITLGIIVLIVLILIGA
Ga0318577_101675731	3300032091	Soil	VAVGIHDYTGPGASAITLGIIVLIVLILIGAYARGNR
Ga0311301_1006209810	3300032160	Peatlands Soil	MLVGVAVGMHGYNGPGAMVITLAVPALIVLILVTVYGRRKR
Ga0307471_1005757113	3300032180	Hardwood Forest Soil	MLIGVAVGIHSYNGPGASVFVFGTVALIVLILVVVYRPRKRR
Ga0306920_1028348032	3300032261	Soil	RSTVMLNGVAVGVHDYTGPGASAITFGIIALIVLILITAYVRGKGLSA
Ga0335085_100846744	3300032770	Soil	MLIGVAVGVHDYTGPGASAITLGIIALIVLILIGVYARGNR
Ga0335085_105264582	3300032770	Soil	MPKADRTGPGASAITLGIIALIVLILIGVYARGNR
Ga0335085_108856812	3300032770	Soil	MLIGVPVVAVRMHDYTGPYASAITLGIIVLIVLILVGVYSRKNQ
Ga0335085_116172911	3300032770	Soil	MLIGVAVGVHDYTGPGASAITLGIIALIVLILIGVYAR
Ga0335079_102827363	3300032783	Soil	MPIGAAVVAVGMHGYNGPGAIVITLGVPVLLVLILVGVYGRRSRR
Ga0335070_103226801	3300032829	Soil	MLFGVAVGVHDYTGPGASAITIGIIAIVVVILVGAYARGKR
Ga0335083_100316886	3300032954	Soil	MLIAAAVVAVGMHGYNGPGAIVITLGVPVLLVLILVGVYGRRNRR
Ga0335083_100413155	3300032954	Soil	RSTVMLIGVAVGVHDYTGPGASAITLGIIALIVLILIGVYARGNR
Ga0335076_101783913	3300032955	Soil	MQIGAAVVAVGMHGYNGPGAVVITLGVPVLLVLILVGVYSRRSRR
Ga0335073_102192253	3300033134	Soil	MLTGTAIVAMGHDYNGPGASAITLGIVGLIVLILAGVYGRKNR
Ga0335073_111672042	3300033134	Soil	MLIGNAVVALGHDYNGPGASAITLGIVALIVLILAGVYGRKNR
Ga0335077_101214671	3300033158	Soil	MLIGVPVVAVRMHDYTGPYASAITLGIIVLIVLILVGVYSRKN
Ga0335077_112773491	3300033158	Soil	MPIGVPVVAVRMHDYTGPYASAITFGIIALIVLILVGVYGRKNR
Ga0370515_0132713_825_950	3300034163	Untreated Peat Soil	MLIGVAVGMHGYNGPGALVITIAVPVLIVLILVGVYGRRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences