NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074030

Metagenome / Metatranscriptome Family F074030

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074030
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 59 residues
Representative Sequence MSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPAAFEEFIANHPSNG
Number of Associated Samples 85
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 69.23 %
% of genes near scaffold ends (potentially truncated) 3.33 %
% of genes from short scaffolds (< 2000 bps) 5.83 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (90.833 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(56.667 % of family members)
Environment Ontology (ENVO) Unclassified
(93.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.07%    β-sheet: 0.00%    Coil/Unstructured: 53.93%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF00565SNase 11.67
PF16945Phage_r1t_holin 7.50
PF00589Phage_integrase 5.83
PF01471PG_binding_1 2.50
PF14657Arm-DNA-bind_4 1.67
PF13459Fer4_15 1.67
PF09723Zn-ribbon_8 1.67
PF08774VRR_NUC 1.67
PF05361PP1_inhibitor 1.67
PF03354TerL_ATPase 0.83
PF11171DUF2958 0.83
PF14550Peptidase_S78_2 0.83
PF00171Aldedh 0.83
PF136402OG-FeII_Oxy_3 0.83
PF04586Peptidase_S78 0.83
PF05065Phage_capsid 0.83
PF02515CoA_transf_3 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.83
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.83
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.83
COG3740Phage head maturation proteaseMobilome: prophages, transposons [X] 0.83
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.83
COG4626Phage terminase-like protein, large subunit, contains N-terminal HTH domainMobilome: prophages, transposons [X] 0.83
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.83 %
All OrganismsrootAll Organisms9.17 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006352|Ga0075448_10190077All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300006929|Ga0098036_1010439All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3012Open in IMG/M
3300007514|Ga0105020_1003185All Organisms → cellular organisms → Bacteria20005Open in IMG/M
3300007514|Ga0105020_1004959Not Available15193Open in IMG/M
3300007963|Ga0110931_1070975All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300017705|Ga0181372_1048425All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300021442|Ga0206685_10002715All Organisms → cellular organisms → Bacteria5377Open in IMG/M
3300025082|Ga0208156_1043171All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300025122|Ga0209434_1070671All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300025128|Ga0208919_1001385All Organisms → cellular organisms → Bacteria14061Open in IMG/M
3300025128|Ga0208919_1016710All Organisms → cellular organisms → Bacteria2825Open in IMG/M
3300025168|Ga0209337_1176666Not Available894Open in IMG/M
3300028022|Ga0256382_1039455All Organisms → cellular organisms → Bacteria1077Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine56.67%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater8.33%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater8.33%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.50%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine4.17%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.17%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.67%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.67%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.83%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater0.83%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.83%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.83%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids0.83%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300005398Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201EnvironmentalOpen in IMG/M
3300005422Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43EnvironmentalOpen in IMG/M
3300005423Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47EnvironmentalOpen in IMG/M
3300005428Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253EnvironmentalOpen in IMG/M
3300005592Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89EnvironmentalOpen in IMG/M
3300006093Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007514Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008735Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009132Combined Assembly of Gp0139359, Gp0139510EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300020327Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)EnvironmentalOpen in IMG/M
3300020435Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021352Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021978Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmerEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026192Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)EnvironmentalOpen in IMG/M
3300026193Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B (SPAdes)EnvironmentalOpen in IMG/M
3300026212Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)EnvironmentalOpen in IMG/M
3300026267Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GBIDBA_10012526113300001683Hydrothermal Vent PlumeVSNVTKLLAGITALFVAIGALVGTINMTIGKQDTPAGVTIVLNTPEAYADFISSHPAG*
JGI25134J35505_1002546533300002518MarineVNTVTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGITIVLNSPEAYANFLANHPSSN
JGI25136J39404_103147533300002760MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFISNHPSNG*
JGI25136J39404_105240923300002760MarineMSKMTKLIAAVTALLVALGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG*
Ga0066858_1003399623300005398MarineVLWEEEEVWEVDNRMNNLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG*
Ga0066829_1011898923300005422MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPGASTGTIIVLDSPEAYANFLANHSATG
Ga0066828_1015030923300005423MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHS
Ga0066863_1032096013300005428MarineMTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGIMIVLNSPEAYANFLANHPSSN*
Ga0066838_1014969723300005592MarineVPGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG*
Ga0082019_101652033300006093MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTLIVLDSPEAYANFLANHSATG
Ga0082019_109715413300006093MarineVLWEEEEVWEVDNRMNNLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANF
Ga0075441_1017951913300006164MarineMGNATKMIAAVTALLVAVGTLVGTISMTIGKGPDAPPGITIVLNSPEAYADFISNH
Ga0068481_127306223300006339MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFIANHPSNG*
Ga0075448_1019007713300006352MarineTALLVAVGTLVGTISMTIGKGPDAPAGITIVLNSPEAYADFITNHPSTG*
Ga0098033_101845033300006736MarineMTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGITIVLNSPEAYANFLANHPSSN*
Ga0098033_104676723300006736MarineVVAVTGLLVAVGTLLGTISMTLGRSPDASSGVIIVLDSPEAYTNFLANHSATG*
Ga0098033_109648923300006736MarineVVAVTGLLVAVGTLLGTISMTLGRSPDASSGVIIVLDSPEAYANFLANHSATG*
Ga0098035_102702943300006738MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSVDAYEEFIANHPSNG*
Ga0098035_103506913300006738MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRSPDASSGVIIVLDSPEA
Ga0098058_101174033300006750MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDAPTGTIIVLDSPEAYANFLANHSATG
Ga0098058_107375123300006750MarineMTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGVTIVLNSPEAYANFLANHPSSN*
Ga0098058_113278723300006750MarineGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG*
Ga0098040_102210923300006751MarineMGRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPEPSGGVTIVLNSPEAYEDFLSNHPAG*
Ga0098040_102377723300006751MarineLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG*
Ga0098044_110594223300006754MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPAAFGEFISNHPSNG*
Ga0098044_110912513300006754MarineMGRVTKLLVAVTGLLVAVGSLVGTISMTIGRGPDTSGGIMIVLNSPEAYETFLAEHPSNG
Ga0098054_120617713300006789MarineMSRMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG*
Ga0098036_101043933300006929MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAFADFIDNHPSSG*
Ga0098036_126723723300006929MarineMSKMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSPAAFEEFISNHPSNG*
Ga0104999_101484563300007504Water ColumnMNNLTKLVVAVTGLLVAVGTLVGTISMTLGRSPDASTGTIIVLDSPEAYANFLANHSATG
Ga0105020_1003185163300007514MarineMTKLIASITGLLVALGTLVGTVSMTIGKGPEPAPAGITIVLNSAEAFEDFLENHPSNG*
Ga0105020_1004959223300007514MarineMSKMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFISNHPSNG*
Ga0105020_110507223300007514MarineMTKLIASITGLLVAVGTLVGTVSMTIGKGPEAPAGITIVLNTPDAYADFLENHPSNG*
Ga0105668_118883323300007758Background SeawaterMTKLIVAVTGLLVAVGTLVGTISMTIGKGPDAPAGITIVLNSVDAYEDFISNHPAGG*
Ga0110931_107097523300007963MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPAAFEEFIANHPSNG*
Ga0098052_135561013300008050MarineMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG*
Ga0114898_115880233300008216Deep OceanMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPS
Ga0114899_100152823300008217Deep OceanVSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAYEDFISNHPAGG*
Ga0114905_119495523300008219Deep OceanMSKATKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAFADFIDNHPSSG*
Ga0115657_103822383300008735MarineVAVTGLLVAVGTLVGTISMTLGRSPDASTGTIIVLDSPEAYANFLANHSATG*
Ga0118730_127346033300009132MarineGCQMSKMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFISNHPSNG*
Ga0114993_1055352123300009409MarineMSNMTKLIASITALLLAVGTLVGTISMTIGKGPEPASGGVVVILQSPEQYAEFFRNHPSTG*
Ga0114903_1002478103300009412Deep OceanMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG*
Ga0114909_103728813300009414Deep OceanKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAYEDFISNHPAGG*
Ga0114908_104475113300009418Deep OceanMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFISNHPSNG*
Ga0105173_100171123300009622Marine OceanicMSNMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPGGVVVILQSPEQYAEFFANHPSTG*
Ga0115002_1076898913300009706MarineIPLRLIGRPMSNMTKLIASITALLLAVGTLVGTISMTIGKGPEPASGGVVVILQSPEQYAEFFRNHPSTG*
Ga0114999_1074792923300009786MarineLTNVTKLIAGITALLLAVGTLVGTISMTIGKGPEAPAGITIILNSPESFADSSKTIPPAANA*
Ga0098061_122837113300010151MarineDHNMGRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPEPSGGVTIVLNSPEAYEDFLSNHPAG*
Ga0098059_106319823300010153MarineMSKMTKLLATITGLLVALGTLVGTVSMTIGKGPEPASGGVVVILQSPEQYAEFFA
Ga0098059_109564623300010153MarineMTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGVVVILQSPEQYAEFFANHPSTG*
Ga0098047_1012716233300010155MarineMERTTKLIIAATGLLVALGTLVGTVSMTIGKGPSDPVPVTKIVLATPEQYQEFIENHPSGG*
Ga0181372_104842523300017705MarineLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFISNHPSNG
Ga0211573_102063753300020327MarineMGRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPDTSGGIMIVLNSPEAYETFLAEHPSNG
Ga0211573_104276233300020327MarineVLWEEEEVWEVDNRMNNLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG
Ga0211639_1024982123300020435MarineMNKTTKLIVAITGLLVAVGTLVGTISMSIGKGPEAPAGITIVLNSPDAYEEFISNHPSGG
Ga0206678_1036941323300021084SeawaterMGRVTKLLVAVTGLLVAVGTLVGTISMTVGKGPDAPAGVTIILNSPEAYEDFISNHPAG
Ga0206680_1016299243300021352SeawaterAVTGLLVAVGTLVGTISMTIGKGPDTSGGITIVLNSPEAYETFLAEHPANG
Ga0206685_1000271553300021442SeawaterMSKMTKLIAAVTALLVALGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSN
Ga0232646_101751323300021978Hydrothermal Vent FluidsMSKMTKLIVAITGLLVAVGTLVGTISMTIGKGPEPGGVVVILQSPEQYAEFFANHPSTG
Ga0187833_1006395543300022225SeawaterMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG
Ga0187833_1011240933300022225SeawaterMSRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPEPSGGVTIVLNSPEAY
Ga0187833_1022444133300022225SeawaterVPGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPGASTGTIIVLDSPEAYANFLANHSATG
Ga0187827_1014969633300022227SeawaterMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANF
Ga0187827_1017671133300022227SeawaterRYCLASQGRRVPGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG
Ga0187827_1046638313300022227SeawaterVNKMTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGIMIVLNSPEAYANFLANHPSSN
Ga0187827_1052382913300022227SeawaterVNKMTKLIVAITGLLVAVGTLVGTISMTIGKGPDASTGIMIVLNSPEAYA
Ga0187827_1077655523300022227SeawaterSRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPEPSGGVTIVLNSPEAYEDFLSNHPAG
(restricted) Ga0255048_1011146723300024518SeawaterMGNATRLIAAVTALLVAVGTLVGTISMTIGKGPDAPAGITIVLNSPEAYADFISNHPSKG
(restricted) Ga0255047_1012059623300024520SeawaterLIAAVTALLVAVGTLVGTISMTIGKGPDAPAGITIVLNSPEAYENFISNHPSSG
(restricted) Ga0255047_1047181723300024520SeawaterMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSN
Ga0207887_101484113300025069MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGNKPESNSEGITIILNSADAYAEFIANHPSN
Ga0208920_100979813300025072MarineMSRVTKLLVAVTGLLVAVGTLVGTISMTIGRGPEPSGGVTIVLNSPEAYEDFL
Ga0208668_104972923300025078MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG
Ga0208156_100478723300025082MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRSPDASSGVIIVLDSPEAYTNFLANHSATG
Ga0208156_104317133300025082MarineKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG
Ga0208156_104981913300025082MarineGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRSPDASTGTIIVLNSPEAYANFLANHSATG
Ga0208011_105129033300025096MarineTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG
Ga0208013_112038923300025103MarineMNRVTKLLVAVTGLLVAVGTLVGTISMTIGKGPDAPAGVTIILNSPEAYETFLAEHPSNG
Ga0208793_106873923300025108MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFISNHPSN
Ga0208433_105138913300025114MarineLIVAITGLLVAVGTLVGTISMTIGKGPDASTGITIVLNSPEAYANFLANHPSSN
Ga0208433_114929113300025114MarineMGRVTKLLVAVTGLLVAVGTLVGTISMTIGDGPEPASGGITIVLNSPEAYADF
Ga0209434_106413413300025122MarineMNNLTKLVIAVTGLLVAVGTLLGTISMTLGRSPDAPSGVIIVLDSPEAYTNFLANHSATG
Ga0209434_106735133300025122MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRSPDAPSGVIIVLDSPEAYTNFLANHSATG
Ga0209434_107067133300025122MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFISNHPSN
Ga0209644_104077223300025125MarineMSNMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPGGVVVILQSPEQYAEFFANHPSTG
Ga0209644_106918723300025125MarineVNKTTKLIVAITGLLVAVGTLVGTISMSIGKGPDAPAGITIVLNSPESYADFIANHPSGG
Ga0208919_100138593300025128MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAFADFIDNHPSS
Ga0208919_101671033300025128MarineMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPAAFEEFIANHPSN
Ga0209756_113136243300025141MarineMNNLTKLIIAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLNSPEAY
Ga0209756_113827713300025141MarineNLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLNSPEAYANFLANHPAGR
Ga0209337_117666623300025168MarineMGKVTKLIAAVTALLVALGTLVGTVSMTIGKGPEPAAGITIVLDSPAAFKAFLDNHPSNG
Ga0207893_103377423300025241Deep OceanQLVTRLPVRLIGRPMSKMTKLIAAITGLLVAVGTLVGTISMTIGKGPEPGGVVVILQSPEQYAEFFANHPSTG
Ga0208180_113504623300025277Deep OceanVSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAYEDFISNHPAG
Ga0208684_115907123300025305Deep OceanLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSAEAFADFIDNHPSSG
Ga0209757_1024259123300025873MarineKLIAAITGLLVAVGTLVGTISMTIGKGPEPGGVVVILQSPEQYAEFFANHPSTG
Ga0207986_111414413300026192MarineVPGHRMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG
Ga0208129_101138433300026193MarineMNNLTKLVIAVTGLLVAVGTLLGTISMTLGRGPDAPSGVIIVLDSPEAYANFLANHSATG
Ga0208409_102082223300026212MarineMNNLTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYTNFLANHSATG
Ga0208278_112758423300026267MarineTKLVVAVTGLLVAVGTLLGTISMTLGRGPDASTGTIIVLDSPEAYANFLANHSATG
Ga0209403_1013009023300027839MarineMSNVTKLIAALTALLVAVGTLVGTMSIIIGKGPDAPAGITIVLNGPEAYEHFSSSHPSSG
Ga0209402_1079411213300027847MarineMSNMTKLIASITALLLAVGTLVGTISMTIGKGPEPASGGVVVILQSPEQYAEFFRNHPST
Ga0256382_100374423300028022SeawaterMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPESSGGITIVLNSAEAYEDFISNHPSSG
Ga0256382_103945513300028022SeawaterRTKLIAAVTGLLVALGTLVGTISMTIGKGPEPASGGITIVLNSDAAFEEFIANHPSNG
Ga0257107_104806523300028192MarineVSNVTRLLAGITALLVAVGTLVGTISMTIGERDTPAGVTIVLNSPEAYADFITNHPAD
Ga0257107_114133513300028192MarineVNKTTKLIVAVTGLLVAVGTLVGTVSMTIGRGPDAPAGITIVLNSPESYADFIANHPSGG
Ga0302137_102228053300031588MarineMSNVTKLIAALTALLVAVGTLVGTMSIIIGKGPDAPAGITIVLNGPEAYEHFS
Ga0302119_1000593923300031606MarineMTKLLAAITGLLVAVGTLVGTVSMTIGKGPGAPVGITVVLDSVEAYEAFILDHPSVG
Ga0302119_1009838733300031606MarineVSNVTKMIVAITGLLVAVGTLVGTVSMTIGKGPDAPAGITIVLNSPEAYADFITNHPSNG
Ga0302119_1021450823300031606MarineMNNTTKLIVAITGLLVAVGTLVGTISMSIGKGPEAPAGITIVLNSPEAFEDFISNHPSGG
Ga0302123_1048854713300031623MarineMSKMTKLIAAVTGLLVAVGTLVGTVSMTIGKGPGAPVGITVVLDSVEAYEEFILNHPSAG
Ga0315328_1013524923300031757SeawaterMSNMTRLLATISGLLVALGTLVGTVSLTLGKGPEPASGGVVVILQSPEQYAEFFANHPSN
Ga0315326_1091875813300031775SeawaterDSSDPMSKMTRLLATITGLLVALGTLVGTVSMTIGKGPEPASGGVVVILQSPEQYAEFFANHPSNG
Ga0315318_1027373923300031886SeawaterMSKMTKLIAAVTGLLVAVGTLVGTISMTIGKGPEPASGGITIVLNSPDAFEEFIANHPSN
Ga0315316_1047512413300032011SeawaterMSNMTRLLATITGLLVALGTLVGTVSLTLGKGPEPASGGVVVILQSPEQYAEFFANHPSN
Ga0310345_1073375213300032278SeawaterLVAVTGLLVAVGTLVGTISMTVGKGPEPSGGITIVLNSPEAYEDFITNHPAG
Ga0315334_1041222923300032360SeawaterMTKLIAAITGLLVALGTLVGTISLTLGKGPEPASGGVVVILQSPEQYAEFFANHPSTG
Ga0315334_1052250413300032360SeawaterVTKLLVAVTGLLVAVGTLVGTISMTIGKGPDTSGGITIVLNSPEAYETFLAEHPANG
Ga0315334_1178551313300032360SeawaterLSKMTKLIAAVTALLVAVGTLVGTISMTIGKGPEASGGITIVLNSPDAYEDFISN
Ga0310342_10005259073300032820SeawaterMGRVTKLLVAVTGLLVAVGTLVGTISMTVGKGPEPSGGITIVLNSPEAYEDFITNHPAG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.