Metagenome Family F074021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074021
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	52 residues
Representative Sequence	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDK
Number of Associated Samples	82
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	3.33 %
% of genes from short scaffolds (< 2000 bps)	3.33 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (54.167 % of family members)
Environment Ontology (ENVO)	Unclassified (96.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1SI48aug10_10mDRAFT_10198281 2JGI24006J15134_102171961 3JGI25134J35505_100403191 4JGI25134J35505_100642342 5Ga0066849_103932071 6Ga0066852_101880973 7Ga0075441_103643331 8Ga0098033_11143751 9Ga0098033_11462601 10Ga0098035_11667851 11Ga0098039_11388851 12Ga0098039_11917521 13Ga0098044_13322721 14Ga0098044_13342501 15Ga0098044_13605782 16Ga0098054_10350334 17Ga0098054_10639104 18Ga0098054_12193511 19Ga0098054_12518882 20Ga0098054_13574121 21Ga0098055_13501131 22Ga0098055_13639261 23Ga0098053_10133871 24Ga0098053_10396473 25Ga0098053_10943433 26Ga0098057_11655982 27Ga0098046_10120114 28Ga0075468_100864991 29Ga0070747_11227101 30Ga0098052_10801771 31Ga0098052_12132592 32Ga0098052_12342901 33Ga0114905_12118042 34Ga0115552_13675121 35Ga0114909_10962903 36Ga0115557_10909854 37Ga0115570_101824801 38Ga0115572_104743603 39Ga0115003_105017571 40Ga0115011_106088281 41Ga0115000_106106033 42Ga0098056_11075042 43Ga0098056_11304222 44Ga0098061_11068581 45Ga0098061_12780871 46Ga0098061_13310011 47Ga0098059_11472631 48Ga0098059_11846243 49Ga0098059_11908531 50Ga0098059_12916473 51Ga0151669_1396172 52Ga0181367_10484633 53Ga0181367_10919982 54Ga0181371_10146785 55Ga0181372_10154162 56Ga0181372_10308181 57Ga0181372_10399591 58Ga0181372_10462322 59Ga0181387_10178691 60Ga0181403_10016488 61Ga0181391_10914892 62Ga0181412_10367361 63Ga0181375_10607222 64Ga0181375_10690151 65Ga0181383_11531761 66Ga0181381_11238471 67Ga0181396_10112224 68Ga0181396_11135022 69Ga0181417_10193051 70Ga0181415_11386802 71Ga0187222_10525671 72Ga0181431_11270111 73Ga0181433_10728441 74Ga0181418_10754853 75Ga0181399_10763791 76Ga0181397_10465933 77Ga0181389_11346632 78Ga0181393_10703511 79Ga0181405_10368551 80Ga0181411_10274233 81Ga0181411_11078091 82Ga0181409_10348061 83Ga0181408_10453953 84Ga0181408_11478281 85Ga0181413_10973101 86Ga0181406_10831641 87Ga0181406_11174543 88Ga0187220_11564981 89Ga0181430_11019313 90Ga0181432_10226074 91Ga0181432_10602452 92Ga0181432_10702631 93Ga0181432_10839821 94Ga0181394_10265874 95Ga0181395_11403841 96Ga0181379_10476844 97Ga0212022_10598721 98Ga0207906_10266381 99Ga0208012_10317373 100Ga0208012_10365752 101Ga0208668_10847751 102Ga0208791_10750152 103Ga0208298_10901061 104Ga0209349_10120941 105Ga0208433_10548441 106Ga0208299_10581961 107Ga0208299_10670691 108Ga0208299_10854281 109Ga0209756_11076651 110Ga0209645_10691472 111Ga0208134_11589592 112Ga0208545_11453273 113Ga0209714_10915853 114Ga0209709_102267173 115Ga0307488_106249481 116Ga0307488_108364522 117Ga0302118_101412112 118Ga0302118_102656443 119Ga0307986_101008631 120Ga0307986_104016362
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1SI48aug10_10mDRAFT_10198281 2JGI25134J35505_100403191 3JGI25134J35505_100642342 4Ga0098035_11667851 5Ga0098044_13342501 6Ga0115572_104743603 7Ga0115003_105017571 8Ga0098061_12780871 9Ga0181387_10178691 10Ga0181415_11386802 11Ga0208668_10847751 12Ga0307986_101008631
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1SI48aug10_10mDRAFT_10198281 2JGI25134J35505_100403191 3JGI25134J35505_100642342 4Ga0098035_11667851 5Ga0098044_13342501 6Ga0115572_104743603 7Ga0115003_105017571 8Ga0098061_12780871 9Ga0181387_10178691 10Ga0181415_11386802 11Ga0208668_10847751 12Ga0307986_101008631
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.37% β-sheet: 0.00% Coil/Unstructured: 29.63%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05050	Methyltransf_21	2.50
PF01391	Collagen	1.67
PF01521	Fe-S_biosyn	0.83
PF10507	TMEM65	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.83 %
Unclassified	root	N/A	99.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
Viruses	superkingdom	All Organisms → Viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.17 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.83 %

Name	Rank	Taxonomy	Distribution
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.83 %
Unclassified	root	N/A	99.17 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300007229\|Ga0075468_10086499	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1010	Open in IMG/M
3300008050\|Ga0098052_1080177	Not Available	1353	Open in IMG/M
3300009414\|Ga0114909_1096290	Not Available	817	Open in IMG/M
3300017704\|Ga0181371_1014678	Not Available	1320	Open in IMG/M

Showing 1 to 4 of 4 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	6.67%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	55.83%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.17%
Strait	Environmental → Aquatic → Marine → Strait	30.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	55.83%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	30.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.17%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	54.17%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.67%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.83%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.83%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.17%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.67%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	30.00%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000207	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 10m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 82 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SI48aug10_10mDRAFT_10198281	3300000207	Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLA
JGI24006J15134_102171961	3300001450	Marine	MKLFFENWRKHLYEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGD
JGI25134J35505_100403191	3300002518	Marine	MKLLFEGWRKHLSEDKKYAQVLHEVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRII
JGI25134J35505_100642342	3300002518	Marine	MIKLLFENWRKHLSEDKTQVLREVTEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKTT
Ga0066849_103932071	3300005430	Marine	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKSTG
Ga0066852_101880973	3300005604	Marine	MMKLFFENWRKHLSEDKTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRII
Ga0075441_103643331	3300006164	Marine	MLKLLFENWREHLSEDKKHVQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDT
Ga0098033_11143751	3300006736	Marine	MMKLLFENWRKHLSEDKTQVLREVTEGELEHIQRAIEEMAPTDLAFNHLFGDKMRRIIDFDTID
Ga0098033_11462601	3300006736	Marine	MMKLLFENWRGHLSEDKTRVLREVTEGELEHIQKALEEMEPTDLAFNHLFGDKMR
Ga0098035_11667851	3300006738	Marine	LDYLEQRGTTLMKLLFEGWRKHLSEDKKYAQVLHEVTEGELEHIQRAIEEMEPTDLAFNH
Ga0098039_11388851	3300006753	Marine	MIKLLFENWRQHLSEDKTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRI
Ga0098039_11917521	3300006753	Marine	MKLFFENWRKHLSEDNTQVLREVTDDELGHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDTIDKTT
Ga0098044_13322721	3300006754	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDL
Ga0098044_13342501	3300006754	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEM
Ga0098044_13605782	3300006754	Marine	MIKLLFENWRQHLSEDKTQVLREVTEGELEHIQKALE
Ga0098054_10350334	3300006789	Marine	MKLFFENWRKHLSEDNTQVLREVTDDELGHIQKALEEMEP
Ga0098054_10639104	3300006789	Marine	MKLFFENWRKHLSEDKTQVLREVDEGELEHIQKALEEMAP
Ga0098054_12193511	3300006789	Marine	MMKLLFENWRGHLFEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNHLFGDKMRRII
Ga0098054_12518882	3300006789	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDLAFN
Ga0098054_13574121	3300006789	Marine	MKLFFENWRKHLSEDNAQVLREVDEGELEHIQTALEE
Ga0098055_13501131	3300006793	Marine	MKLFFENWRKHLSEDKNTTQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKS
Ga0098055_13639261	3300006793	Marine	MKLFFENWRKHLSEDKKYTQILREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDT
Ga0098053_10133871	3300006923	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTD
Ga0098053_10396473	3300006923	Marine	MMKLLFENWRDHLSEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNHLFGDKMRRII
Ga0098053_10943433	3300006923	Marine	MMKLFFENWRKHLSEDNTQVLREVTEDELEHIQKALEEMEP
Ga0098057_11655982	3300006926	Marine	MMKLLFENWRGHLFEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNHLFGDKMRRI
Ga0098046_10120114	3300006990	Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFN
Ga0075468_100864991	3300007229	Aqueous	MKLFFENWRKHLSEDKNTTQVLREVDEEELGHIQTALEEMEPTD
Ga0070747_11227101	3300007276	Aqueous	MKLFFENWRKHISEDKKSTQVLREVDEEELGNIQTALEEMEPTDLAFNHLF
Ga0098052_10801771	3300008050	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0098052_12132592	3300008050	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELEHIQKALE
Ga0098052_12342901	3300008050	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRI
Ga0114905_12118042	3300008219	Deep Ocean	MKLFFENWRKHLSEDKTQVLREVTEGELEHIQRAIEEMAPTDLAFNHLFGDKMRRIIDFD
Ga0115552_13675121	3300009077	Pelagic Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDKMRKIID
Ga0114909_10962903	3300009414	Deep Ocean	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0115557_10909854	3300009443	Pelagic Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTVD
Ga0115570_101824801	3300009496	Pelagic Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDK
Ga0115572_104743603	3300009507	Pelagic Marine	MKLFFENWRKHLSEDKKSTQVLREVDEEELGHIQT
Ga0115003_105017571	3300009512	Marine	MLKVLFENWRNHLSEDKQHVQVLREVSEDELGHIQRALEEMEPTDLAFNHL
Ga0115011_106088281	3300009593	Marine	MKLFFENWRKHLSEDKKYTQILREVDEEELGNIQTALEEMEPTDLAFNHLFGDK
Ga0115000_106106033	3300009705	Marine	MTKLLFENWRKHLSEDKQHTQVLREVTESELGHIQKALEEREPTGLAFNHLFGDKMRKIIDFDTVD
Ga0098056_11075042	3300010150	Marine	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0098056_11304222	3300010150	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELEHIQKALEEMEPTDLAFNH
Ga0098061_11068581	3300010151	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRRIID
Ga0098061_12780871	3300010151	Marine	MIKLLFENWRQHLSENKTQVLREVDEDELGHIQKALEEMAPTD
Ga0098061_13310011	3300010151	Marine	MIKLLFENWRKHLSEDKTQVLREVTEDELGHIQKALEEMEPTDLAFNH
Ga0098059_11472631	3300010153	Marine	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDF
Ga0098059_11846243	3300010153	Marine	MKLLFEGWRKHLSEDKKYAQVLHEVTEDEIGHIQKALEEMEPTDLAFNHLFGDKMRRII
Ga0098059_11908531	3300010153	Marine	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRII
Ga0098059_12916473	3300010153	Marine	MKLFFENWRKHLSEDNAQVLREVDEGELEHIQTALEEMEPTDLAFNHLFGDKMRR
Ga0151669_1396172	3300011128	Marine	MKLFFENWRKHLSEDKKSTQILREIDEEELGNIQTALEEMEPTDLA
Ga0181367_10484633	3300017703	Marine	LDYLEQRGTTLMKLLFEGWRKHLSEDKKYAQVLHEVTEDELGHIQKALEEMEPTD
Ga0181367_10919982	3300017703	Marine	MIKLLFENWRKHLSEDNTQVLREVDEDELGHIQKALEEMEPTDLAFNHLFGD
Ga0181371_10146785	3300017704	Marine	MKLLFEGWRKHLSEDKKYAQVLHEVTEDEIGHIQKALEEMEPTDLAFNHLFG
Ga0181372_10154162	3300017705	Marine	MLKLLFENWRGHLSEDKAQVLREVTEGELEHIQRAIEEMAPTDLAFNHLFGD
Ga0181372_10308181	3300017705	Marine	MIKLLFENWRKHLSEDKTQVLREVTEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKTTGL
Ga0181372_10399591	3300017705	Marine	MKLFFENWRKHISEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRI
Ga0181372_10462322	3300017705	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEE
Ga0181387_10178691	3300017709	Seawater	MLKLLFENWREHLSEDNKHAQILREVDEEELGNIQTALEEMEPTDLAFNHLFGDK
Ga0181403_10016488	3300017710	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0181391_10914892	3300017713	Seawater	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNH
Ga0181412_10367361	3300017714	Seawater	MKLFFENWRKHISEDKKSTQVLREVDEEELGNIQTALEEMEPTDLA
Ga0181375_10607222	3300017718	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPTDLAFNHLFGDKMRR
Ga0181375_10690151	3300017718	Marine	MKLFFENWRKHLSEDNTQVLREVTEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIID
Ga0181383_11531761	3300017720	Seawater	MKLFFENWRKHLSEDKNTTQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRII
Ga0181381_11238471	3300017726	Seawater	MLKLLFENWREHLSEDNKHAQILREVDEEELGNIQTALEEMEPTDLAFNHL
Ga0181396_10112224	3300017729	Seawater	MKLFFENWRKHLSEDKSATQVFREVDEEELGNIQT
Ga0181396_11135022	3300017729	Seawater	MKLFFENWRKHISEDKKSTQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRII
Ga0181417_10193051	3300017730	Seawater	MKLFFENWRKHISEDKKSTQVLREIDEEELGNIQTALEEMEPTDLAFNH
Ga0181415_11386802	3300017732	Seawater	MLKLLFENWREHLSEDKKHVQVLREIDEEELGNIQTALEEMKP
Ga0187222_10525671	3300017734	Seawater	MKLFFENWRKHISEDKKSTQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTV
Ga0181431_11270111	3300017735	Seawater	MKLFFENWRKHLSEDKNTTQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKSTGL
Ga0181433_10728441	3300017739	Seawater	MKLFFENWRKHLSEDKKSTQILREIDEEELGNIQTALEEMEPTDLAFNHLF
Ga0181418_10754853	3300017740	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRR
Ga0181399_10763791	3300017742	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEDLGNIQTALVEMEPTDLAFNHLFDD
Ga0181397_10465933	3300017744	Seawater	MKLFFENWRKHLYEDKNTAQVLREVDEEELGNIQTALEEM
Ga0181389_11346632	3300017746	Seawater	MLKLLFENWREHLSEDNKHVQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRR
Ga0181393_10703511	3300017748	Seawater	MLKLLFENWREHLSEDNKHVQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGD
Ga0181405_10368551	3300017750	Seawater	MLKLLFENWREHLSEDKKHVQILREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0181411_10274233	3300017755	Seawater	MLKLLFENWREHLSEDKKHGQVLREIDEEELGIIQTALEEREPTD
Ga0181411_11078091	3300017755	Seawater	MLKLLFENWREHLSEDNKHAQILREVDEEELGNIQTALEEMEPTELAFNHLFGDKMRRIIDFDTVDKS
Ga0181409_10348061	3300017758	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEE
Ga0181408_10453953	3300017760	Seawater	MKLFFENWRKHLYEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIIDFD
Ga0181408_11478281	3300017760	Seawater	MLKLLFENWREHLSEDKKHVQILREIDEEELGNIQTALEEMEPTDLAFNHLFGDKM
Ga0181413_10973101	3300017765	Seawater	MLKLLFENWREYLSEDKQSVQVLREIDEEELGNIQTALEEMEPTD
Ga0181406_10831641	3300017767	Seawater	MKLFFENWRKHISEDKKSTQVLREIDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIID
Ga0181406_11174543	3300017767	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTA
Ga0187220_11564981	3300017768	Seawater	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTA
Ga0181430_11019313	3300017772	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTAL
Ga0181432_10226074	3300017775	Seawater	MMKLFFENWRKHLSEDKTQVLREVTEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDTIDKST
Ga0181432_10602452	3300017775	Seawater	MMKLFFENWRSHLSEDKTHTQVLREVDEDELGHIQKALE
Ga0181432_10702631	3300017775	Seawater	MMKLLFENWRGHLSEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDT
Ga0181432_10839821	3300017775	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEDELGHIQTALEEMEPT
Ga0181394_10265874	3300017776	Seawater	MLKLLFENWREHLSEDNKHAQILREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRII
Ga0181395_11403841	3300017779	Seawater	MLKLLFENWREHLSEDKKHVQILREIDEEELGNIQTALEEMEPTDLAFNHLFGDK
Ga0181379_10476844	3300017783	Seawater	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGD
Ga0212022_10598721	3300022164	Aqueous	MLKLLFENWREHLSEDKKHVQILREIDEEELGHIQTALEEMEPTDLAFNHLFGDKMR
Ga0207906_10266381	3300025052	Marine	MMKLLFENWRGHLSEDKTRVLREVTEGELEHIQRAIEEMAPTDLAFNHLFGDKMRRIIDFDT
Ga0208012_10317373	3300025066	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALEEMEPT
Ga0208012_10365752	3300025066	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELGHIQKALE
Ga0208668_10847751	3300025078	Marine	MMKLLFENWRGHLFEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNH
Ga0208791_10750152	3300025083	Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGNIQTALEEMEPTDLAFNHLFGDKMRRIID
Ga0208298_10901061	3300025084	Marine	MKLFFENWRKHLSEDKKYTQILREVDEEELGNIQTALEEM
Ga0209349_10120941	3300025112	Marine	MKLFFENWRKHLSEDKTQVLREVTEGELEHIQKALEEMAPTDLAFNHLFGDKMRRIIDFDTVDKTTG
Ga0208433_10548441	3300025114	Marine	MMKLLFENWRGHLFEDKTRVLREVDEGELEHIQKALEEMEPTDLAFNHLFGDKMRRIIDFDTVDK
Ga0208299_10581961	3300025133	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELEHIQKALEE
Ga0208299_10670691	3300025133	Marine	MKLFFENWRKHLSEDNTQVLREVTEDELEHIQRAIEEMEPTDLA
Ga0208299_10854281	3300025133	Marine	MKLFFENWRKHLSEDNAQVLREVDEGELEHIQTALEEMEPTDLAFNHLFGDKMRRIIDFDTVDKSTG
Ga0209756_11076651	3300025141	Marine	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLF
Ga0209645_10691472	3300025151	Marine	MLKLLFENWREHLSEDKQSVQVLREIDEEELGNIQTALEEMEPTDLAFNHLF
Ga0208134_11589592	3300025652	Aqueous	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEMEPTDLAFNHLFGDKMRRIID
Ga0208545_11453273	3300025806	Aqueous	MKLFFENWRKHLSEDKNTAQVLREVDEEELGHIQTALEEME
Ga0209714_10915853	3300025822	Pelagic Marine	MKLFFENWRKHLSEDKKSTQILREVDEEELGHIQTALEEME
Ga0209709_102267173	3300027779	Marine	MLKVLFENWRKHLSEDKQHTQVLREVSENELGHIQKALEEMEPTDLAFNHLF
Ga0307488_106249481	3300031519	Sackhole Brine	MKLFFENWRKHLSEDKKSTQVLREVDEEELGNIQTALEEMEPTD
Ga0307488_108364522	3300031519	Sackhole Brine	MKLFFENWRKHISEDKKSTQVLREIDEEELGNIQTALEEMEPTDLAFN
Ga0302118_101412112	3300031627	Marine	MLKLLFENWRDHLSENKNHTQVLREVDEEELGNIQTALEEMEPT
Ga0302118_102656443	3300031627	Marine	MQLLFENWRKHLSEEKVHTQVLREVTEDELGHIQRALEE
Ga0307986_101008631	3300031659	Marine	MLKLLFENWRNHLSEDKQHTQILREVSEDELGHIQK
Ga0307986_104016362	3300031659	Marine	MLKLLFENWRNHLSEDKQHTQILREVTEDELGHIQKALEEMEPTDLAFNHLFGDNM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences