Metagenome Family F074000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074000
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	50 residues
Representative Sequence	IAPAFNYEPTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTPK
Number of Associated Samples	111
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (45.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.47% Coil/Unstructured: 67.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00072	Response_reg	44.17
PF00158	Sigma54_activat	25.00
PF02954	HTH_8	6.67
PF07238	PilZ	1.67
PF01596	Methyltransf_3	1.67
PF05402	PqqD	0.83
PF00496	SBP_bac_5	0.83
PF07920	DUF1684	0.83
PF13683	rve_3	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.67
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	1.67
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.50 %
Unclassified	root	N/A	22.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.50 %
Unclassified	root	N/A	22.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.50 %
Unclassified	root	N/A	22.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.67 %
Unclassified	root	N/A	22.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.17 %
Unclassified	root	N/A	22.50 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	6.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.33 %
Unclassified	root	N/A	22.50 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.50 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	2.50 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.83 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.33 %
Unclassified	root	N/A	22.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	2.50 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.83 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.33 %
Unclassified	root	N/A	22.50 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	2.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.83 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.33 %
Unclassified	root	N/A	22.50 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2.50 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.50 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.83 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_10358522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300001116\|JGI12627J13344_100880	All Organisms → cellular organisms → Bacteria	4588	Open in IMG/M
3300001867\|JGI12627J18819_10030038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2246	Open in IMG/M
3300004114\|Ga0062593_101940371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	652	Open in IMG/M
3300004643\|Ga0062591_100587873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300005093\|Ga0062594_103286543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005354\|Ga0070675_101633205	Not Available	595	Open in IMG/M
3300005355\|Ga0070671_100943707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005356\|Ga0070674_100102444	Not Available	2088	Open in IMG/M
3300005366\|Ga0070659_101171803	Not Available	679	Open in IMG/M
3300005440\|Ga0070705_100949747	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300005440\|Ga0070705_101140845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005444\|Ga0070694_101902702	Not Available	508	Open in IMG/M
3300005458\|Ga0070681_11734474	Not Available	551	Open in IMG/M
3300005458\|Ga0070681_11833514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005536\|Ga0070697_101438526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300005545\|Ga0070695_101491319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005546\|Ga0070696_101542339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005615\|Ga0070702_100591300	Not Available	830	Open in IMG/M
3300005615\|Ga0070702_101388537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005618\|Ga0068864_101146878	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300005842\|Ga0068858_100728398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300005843\|Ga0068860_101661992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	660	Open in IMG/M
3300005844\|Ga0068862_100634029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300006169\|Ga0082029_1102945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300006237\|Ga0097621_102208748	Not Available	526	Open in IMG/M
3300006358\|Ga0068871_102000164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300006804\|Ga0079221_10393155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300006852\|Ga0075433_11660022	Not Available	551	Open in IMG/M
3300006854\|Ga0075425_102282945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300006871\|Ga0075434_102016128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006876\|Ga0079217_10677923	Not Available	688	Open in IMG/M
3300006914\|Ga0075436_100018068	All Organisms → cellular organisms → Bacteria	4829	Open in IMG/M
3300006914\|Ga0075436_100420474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300006954\|Ga0079219_10117651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300007004\|Ga0079218_13783649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009089\|Ga0099828_10574887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300009090\|Ga0099827_10382420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300009137\|Ga0066709_100254688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2353	Open in IMG/M
3300009147\|Ga0114129_10983856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300009147\|Ga0114129_11662365	Not Available	780	Open in IMG/M
3300009148\|Ga0105243_12598860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300009174\|Ga0105241_10769164	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300009553\|Ga0105249_10095242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2791	Open in IMG/M
3300009553\|Ga0105249_10270928	Not Available	1691	Open in IMG/M
3300010042\|Ga0126314_10046292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2804	Open in IMG/M
3300010046\|Ga0126384_12148647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010358\|Ga0126370_11733451	Not Available	602	Open in IMG/M
3300010373\|Ga0134128_11250980	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300010375\|Ga0105239_13407761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300010397\|Ga0134124_13164964	Not Available	504	Open in IMG/M
3300010399\|Ga0134127_10571145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300010400\|Ga0134122_10265046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300011271\|Ga0137393_10550752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300011444\|Ga0137463_1242957	Not Available	672	Open in IMG/M
3300012200\|Ga0137382_11143261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012201\|Ga0137365_10497234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300012204\|Ga0137374_10139966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2184	Open in IMG/M
3300012211\|Ga0137377_10584818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300012212\|Ga0150985_114912959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300012354\|Ga0137366_11182759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012355\|Ga0137369_10523211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300012358\|Ga0137368_10428322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012360\|Ga0137375_11436081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012362\|Ga0137361_10487081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300012362\|Ga0137361_10907470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300012509\|Ga0157334_1081339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012899\|Ga0157299_10244213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012906\|Ga0157295_10317739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012925\|Ga0137419_11862203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012930\|Ga0137407_10872544	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300012948\|Ga0126375_10698262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300012960\|Ga0164301_11825615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012985\|Ga0164308_11965793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300013100\|Ga0157373_10866886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300013102\|Ga0157371_10725697	Not Available	745	Open in IMG/M
3300013294\|Ga0120150_1030958	Not Available	1064	Open in IMG/M
3300013308\|Ga0157375_10972409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	990	Open in IMG/M
3300014150\|Ga0134081_10363518	Not Available	534	Open in IMG/M
3300014263\|Ga0075324_1123362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300014326\|Ga0157380_12941380	Not Available	542	Open in IMG/M
3300015197\|Ga0167638_1107649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300015245\|Ga0137409_11508866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300015262\|Ga0182007_10203256	Not Available	693	Open in IMG/M
3300015374\|Ga0132255_105982469	Not Available	515	Open in IMG/M
3300018054\|Ga0184621_10121841	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300018061\|Ga0184619_10403620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300018476\|Ga0190274_10053927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2927	Open in IMG/M
3300019360\|Ga0187894_10519396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300019886\|Ga0193727_1137954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300021090\|Ga0210377_10342370	Not Available	904	Open in IMG/M
3300025885\|Ga0207653_10107221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300025893\|Ga0207682_10195913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300025910\|Ga0207684_10968189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300025910\|Ga0207684_11179877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300025918\|Ga0207662_11342270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300025936\|Ga0207670_10406861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300025936\|Ga0207670_11395426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025937\|Ga0207669_11889888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025942\|Ga0207689_10749976	Not Available	824	Open in IMG/M
3300025949\|Ga0207667_11411399	Not Available	670	Open in IMG/M
3300025971\|Ga0210102_1038977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300026088\|Ga0207641_11594152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300026095\|Ga0207676_10468632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300026118\|Ga0207675_101408837	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300026142\|Ga0207698_10142268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2069	Open in IMG/M
3300026377\|Ga0257171_1057435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	677	Open in IMG/M
3300026538\|Ga0209056_10215515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300026806\|Ga0207546_104948	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	512	Open in IMG/M
3300027840\|Ga0209683_10329050	Not Available	703	Open in IMG/M
3300027907\|Ga0207428_10138936	Not Available	1856	Open in IMG/M
3300027909\|Ga0209382_11642669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300028381\|Ga0268264_12540122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300031548\|Ga0307408_102271662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031847\|Ga0310907_10312856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300031903\|Ga0307407_10174104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300031913\|Ga0310891_10246138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300032421\|Ga0310812_10063721	Not Available	1451	Open in IMG/M
3300033412\|Ga0310810_10376113	Not Available	1480	Open in IMG/M
3300034165\|Ga0364942_0219963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	620	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.00%
Host-Associated	Host-Associated	35.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	35.00%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Sediment	Environmental → Aquatic → Sediment	2.50%
Freshwater	Environmental → Aquatic → Freshwater	1.67%
Roots	Host-Associated → Plants → Roots	1.67%
Marine	Environmental → Aquatic → Marine	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.50%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001116	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026806	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-10 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_103585221	3300000953	Soil	NGSGAPIINYESTGLNTDISMRENEPVIVGTLNVGPSGDAIILVMTARRSSR*
JGI12627J13344_1008804	3300001116	Forest Soil	IAANGAVAPTFNYENTGVATDISMRESEPVIVGTLNVGPSGDAIILVVSAKRTQR*
JGI12627J18819_100300383	3300001867	Forest Soil	AANGAVAPTFNYENTGVATDISMRESEPVIVGTLNVGPSGDAIILVVSAKRTQR*
Ga0062593_1019403712	3300004114	Soil	NGAVAPTINYERTGVATDVSMHEGEPVIVGTLNIGPSGDAIILVVSAKRTPK*
Ga0062591_1005878731	3300004643	Soil	GFPVINYDNTGLNTDISLREGEPVVVGTLNAGPSGDAIILVVSAKRTNR*
Ga0062594_1032865432	3300005093	Soil	FNYEQTGVSTDISMREGEPVIVGTLNIGPSGDAIILVVSAKRTTK*
Ga0070675_1016332051	3300005354	Miscanthus Rhizosphere	STGLNTDISMREAEPVVVGTLNIGPSGDAIILVMSVRTTAR*
Ga0070671_1009437072	3300005355	Switchgrass Rhizosphere	SGGVPATNYEPTGLATDISIREGEPVIVGTLNVGPSGDAIILVVSAKRTSR*
Ga0070674_1001024442	3300005356	Miscanthus Rhizosphere	TGLSTDISVREGEPVIVGTLNVGPSGDAIILVVAAKRTQR*
Ga0070659_1011718031	3300005366	Corn Rhizosphere	PPIFNYEGASLSTDISMREGEPVIVGTLNVGPSGDAIILVLSAKRTAK*
Ga0070705_1009497472	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	NYEGTGLATDISMREGDPVVVGTLNVGPSGDAIILVVSAKRTQK*
Ga0070705_1011408452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AVAANGEVRPSINYEQTGLGTDVSMREGEPVVVGTLNVGPSGDAIILVVSAKRAQK*
Ga0070694_1019027021	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PAVNYENTGVATDISIREAEPVIVGTLNVGPSGDAIILVVSAKRTSR*
Ga0070681_117344742	3300005458	Corn Rhizosphere	AQNGPQTAPIINYESTGLNTDISMREGEPVIVGTLNVGPSGDAIILVMTARRTPR*
Ga0070681_118335141	3300005458	Corn Rhizosphere	GAVAPIINYENTGVSTDISMRESEPVIVGTLNIGPSNDAIILVVTAKRAK*
Ga0070697_1014385262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ENTGISTDVSMREAEPVIVGTLNIGPSGDAIILVVSAKRTLK*
Ga0070695_1014913192	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PSINYEQTGLGTDVSMREGEPVVVGTLNVGPSGDAIILVVSAKRAQR*
Ga0070696_1015423392	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QTGAVASTSATAPVFNYESTGLNTDISMREGELVVVGTLHVGPSGDAIILVMSAKRSNK*
Ga0070702_1005913001	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PVINYDNTGLNTDISLREGEPVVVGTLNAGPSGDAIILVVSAKRTNR*
Ga0070702_1013885372	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AVAANGEVRPSINYEQTGLGTDVSMREGEPVVVGTLNVGPSGDAIILVVSAKRAQR*
Ga0068864_1011468781	3300005618	Switchgrass Rhizosphere	VNNPMAAAGAMPPAFNYEQTGVSTDISMHEGEPVIVGTLNIGPSGDAIILVVSAKRTSK*
Ga0068858_1007283981	3300005842	Switchgrass Rhizosphere	APAFNYEPTGLSTDISMREAEPVIVGTLNVGPSGDAIILVVSARRTQK*
Ga0068860_1016619921	3300005843	Switchgrass Rhizosphere	VTHENTGLATDISMRESDPVIVGTLNVGPSGDAIILVVAAKRAQR*
Ga0068862_1006340291	3300005844	Switchgrass Rhizosphere	AAINYENTGLSTDISIREGEPVVVGTLNVGPSGDAIILVVAAKRTGR*
Ga0082029_11029451	3300006169	Termite Nest	NYENTGLSTDISMRESEPVIVGTMNIGPSGDAIILVVAAKRTQK*
Ga0097621_1022087481	3300006237	Miscanthus Rhizosphere	PAINYENTGLSTDISVREAEPVVVGTLNVGPSGDAIILVVAAKRTQR*
Ga0068871_1020001641	3300006358	Miscanthus Rhizosphere	IAANGAVAPIINYENTGVSTDISMRESEPVIVGTLNIGPSNDAIILVVAAKRAK*
Ga0079221_103931551	3300006804	Agricultural Soil	TIAPAFNYETTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTSK*
Ga0075433_116600222	3300006852	Populus Rhizosphere	LSTDISMRESEPVIVGTLNVGPSGDAIILVVAAKRTQR*
Ga0075425_1022829451	3300006854	Populus Rhizosphere	PTLAANGAIAPAFNYEPTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTGK*
Ga0075434_1020161281	3300006871	Populus Rhizosphere	YESTGLNTDISMREGEPVVVGTLNIGPSGDAIILVVSAKRTPQ*
Ga0079217_106779232	3300006876	Agricultural Soil	AVASNAPGPPPVFNYEGTSLSTDVSMREGEPAIVGTLNIGPSGDAVILVVSAKRTSK*
Ga0075436_1000180685	3300006914	Populus Rhizosphere	IAANGAIAPTINYESTGVATDISMREAEPVIVGTLNVGPSGDAIILVVSAKRTSK*
Ga0075436_1004204741	3300006914	Populus Rhizosphere	PLASNSPTPPVFNYENTGLNTDISMREGEPVVVGTLNIGPSGEAIILVVSAKRTMQ*
Ga0079219_101176511	3300006954	Agricultural Soil	ETTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTPK*
Ga0079218_137836491	3300007004	Agricultural Soil	GTNLSTDISMREGEPVVVGTLNVGPSGDAIILVVSAKRTTK*
Ga0099828_105748871	3300009089	Vadose Zone Soil	AVASNGTPTPIINYENTGLTTDISMREGEPVVVGTLNVGPSGDAIILVMSAKRAQR*
Ga0099827_103824202	3300009090	Vadose Zone Soil	VVASNAAAAPIFNYEPTGLNTDISMREGEPVVVGTLNVGPSGDAKILVISAKRTSK*
Ga0066709_1002546882	3300009137	Grasslands Soil	ASAVASNAPAAPIFNYEPTGLNTDISMREGEPVVVGTLNVGPSGDAIILVMSARRTK*
Ga0114129_109838562	3300009147	Populus Rhizosphere	ANGTVAPTVNYEPTGVSTDISLREAEPVIVGTLNIGPSGDAIILVVSAKRTQR*
Ga0114129_116623651	3300009147	Populus Rhizosphere	GGEVRLTTSYEQTGLQTDISMREAEPVIVGTLNVGPSGDAIILVVSARRTQK*
Ga0105243_125988601	3300009148	Miscanthus Rhizosphere	AGAMPPAFNYEQTGVSTDISMHEGEPVIVGTLNIGPSGDAIILVVSAKRTTK*
Ga0105241_107691641	3300009174	Corn Rhizosphere	GAVASTSTTAPVFNYESTGLNTDISMREGEPVVVGTLHVGPSGDAIILVMSAKRSNK*
Ga0105249_100952421	3300009553	Switchgrass Rhizosphere	FPATNYENTGLQTDISIREGEPVIVGTLNVGPSGDAIILVVSSKRTSR*
Ga0105249_102709282	3300009553	Switchgrass Rhizosphere	YESTGLNTDISMRENEPVIVGTLNVGPSGDAIILVMTARRSSR*
Ga0126314_100462921	3300010042	Serpentine Soil	TINYEPTGVSTDVSMREGEPVIVGTLNIGPSGDAIILVVSAKRTMK*
Ga0126384_121486471	3300010046	Tropical Forest Soil	AFNYETTGLSTDISMREGEPVIVGTLNVGPSGDAIVLVVSAKRTQK*
Ga0126370_117334512	3300010358	Tropical Forest Soil	LSTDISMREGEPVIVGTLNVGPSGDAIVLVVSAKRTQK*
Ga0134128_112509802	3300010373	Terrestrial Soil	YESTGLNTDISMREGEAVVVGTLNAGPSGDAIILVVSARRSQK*
Ga0105239_134077611	3300010375	Corn Rhizosphere	AAVASTSAAPVFNYENTGLATDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTQR*
Ga0134124_131649641	3300010397	Terrestrial Soil	YENTGLSTDISMRESEPVIVGTMNIGPSGDAIILVVAAKRTLK*
Ga0134127_105711452	3300010399	Terrestrial Soil	VNYESTGLNTDFSMREGEATIIGTLNIGPSGDAIILVMSAKTTK*
Ga0134122_102650463	3300010400	Terrestrial Soil	PIINYESTGLNTDISMREGEPVIVGTLNIGPSGDAIILVMSAKRTAK*
Ga0137393_105507522	3300011271	Vadose Zone Soil	SNGPAAPIINYEPTGLNTDISMREGEPVVVGTLNAGPSGDAIILVVSAKRSQR*
Ga0137463_12429571	3300011444	Soil	IITASTVASNGPLAPIINYESTGLNSDISMREGEPVVVGTLNIGPSGDAIILVMSGRRTLK*
Ga0137382_111432611	3300012200	Vadose Zone Soil	IINYENTGLNTDISMREGEPVVVGTLNAGPSGDAIILVVSAKRTQK*
Ga0137365_104972342	3300012201	Vadose Zone Soil	GPAAPIINYEPTGLNTDISMREGEPVVVGTLNAGPSGDAIILVVSAKRSQR*
Ga0137374_101399661	3300012204	Vadose Zone Soil	ATAPIISYEATGLTTDISMREGEPVVVGTLHVGPSGDAIILVMTAKRAQR*
Ga0137377_105848182	3300012211	Vadose Zone Soil	STGSPTPIINYESTGLTTDISMREGEAVVVGTLNVGPSGDAIILVVSAKRAMK*
Ga0150985_1149129591	3300012212	Avena Fatua Rhizosphere	AYEPTGVSTDISMREGEPVIVGTLNIGPSGDAIILVVSAKRTMR*
Ga0137366_111827591	3300012354	Vadose Zone Soil	NSPATAPIISYEATGLTTDISMREGEPVVVGTLHVGPSGDAIILVMTAKRAQR*
Ga0137369_105232111	3300012355	Vadose Zone Soil	TAPIISYEATGLTTDISMREGEPVVVGTLHVGPSGDAIILVMTAKRAQR*
Ga0137368_104283221	3300012358	Vadose Zone Soil	IQTGTALASNSPATAPIISYEATGLTTDISMREGEPVVVGTLHVGPSGDAIILVMTAKRAQR*
Ga0137375_114360811	3300012360	Vadose Zone Soil	PATAPIISYEATGLTTDISMREGEPVVVGTLHVGPSGDAIILVMTAKRTQR*
Ga0137361_104870811	3300012362	Vadose Zone Soil	NAPAAPIFNYESTGLNTDISMREGEPVVVGTLNIGPSGDAIILVVSAKRTGQ*
Ga0137361_109074701	3300012362	Vadose Zone Soil	TGLSTDISMREGEPVVVGTLHVGPSGDAIILVMSAKKSNK*
Ga0157334_10813391	3300012509	Soil	AVAPVISYESTGVATDISMREGEPVIVGTLNVSPSGDAIILVVSAKRTSK*
Ga0157299_102442131	3300012899	Soil	EPTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTGK*
Ga0157295_103177391	3300012906	Soil	NGAVAPAVNYEQTGVSTDISMRESEPVIVGTLNVGPSGDAIILVVSAKRTTR*
Ga0137419_118622032	3300012925	Vadose Zone Soil	IINYESTGLNTDISMREGEPVVVGTLNIGPSGDAIILVMSAKRTAK*
Ga0137407_108725442	3300012930	Vadose Zone Soil	QTGAVASTSATAPVFNYETTGLNTDISMREGEPVVVGTLHVGPSGDAIILVMSAKRSRQ*
Ga0126375_106982621	3300012948	Tropical Forest Soil	VINYENTGLNTDISMREGEPVVVGTLNAGPSGDAIVLVVSAKRSSK*
Ga0164301_118256152	3300012960	Soil	GAIAANGAVAPIINYENTGVSTDISIRESEPVIVGTLNIGPSNDAIILVVTAKRAK*
Ga0164308_119657932	3300012985	Soil	GPMAPIINYESTGLNTDISMREGEAVVVGTLNIGPSGDAIILVMSAKSTNR*
Ga0157373_108668862	3300013100	Corn Rhizosphere	AANGAVAPVINYEHTGVATDVSMREGEPVIVGTLNIGPSGDAIILVVSAKRTLK*
Ga0157371_107256971	3300013102	Corn Rhizosphere	MPPAFNYEQTGVSTDISMREGEPVIVGTLNIGPSGDAIILVVSAKRTTK*
Ga0120150_10309582	3300013294	Permafrost	STVASNGPMAPIINYESTGLNTDISMREAEPVVVGTLNIGPSGEAIILVMSARRTLK*
Ga0157375_109724092	3300013308	Miscanthus Rhizosphere	TSMSTATINYETTGLNTDISMREGEPVIVGTLNVGPSGDATILVIVARRTSK*
Ga0134081_103635181	3300014150	Grasslands Soil	GTVTPSISYENTGLNTDISMHEGEPVIVGTLNVSPSGDAIILVVSARRALK*
Ga0075324_11233621	3300014263	Natural And Restored Wetlands	YENTGLATDISMRESEPVIVGTLNVGPSGDAIILVVSAKRTNK*
Ga0157380_129413802	3300014326	Switchgrass Rhizosphere	AYENTGVSTDISLRESEPVIVGTLNIGPSGDAIILVVSAKRTTK*
Ga0167638_11076492	3300015197	Glacier Forefield Soil	INYENTGLNTDISMREGEPVVVGTLNLGPSGDAIILVMSAKRAMK*
Ga0137409_115088661	3300015245	Vadose Zone Soil	PAAPIFNYESTGLSTDISMREGEPVVVGTLNIGPSGDAIILVVSAKRTGP*
Ga0182007_102032561	3300015262	Rhizosphere	GVFTDISMREAEPVIVGTLNIGPSGDAVILVVAAKRTDKSGSWHATR*
Ga0132255_1059824691	3300015374	Arabidopsis Rhizosphere	VNGGIPAINYENTGLSTDISVREAEPVVVGTLNVGPSGDAIILVVAAKRTQR*
Ga0184621_101218411	3300018054	Groundwater Sediment	PPPAPIINYEATGLSTDISMREGEPVVVGTLNVGPSGDAIILVISAKRTNK
Ga0184619_104036201	3300018061	Groundwater Sediment	STVASNGPMAPIINYESTGLNTDISMREGEAVVVGTLNVGPSGDAIILVMSAKRTNK
Ga0190274_100539271	3300018476	Soil	TGAGFPVINYEPTGLSTDISIREGEPAIVGTLYVRPSGDAIILVITARRTIK
Ga0187894_105193961	3300019360	Microbial Mat On Rocks	TYENTGLATDISVRENEPVIVGTLNIGPSGDAIILVVSAKRTGR
Ga0193727_11379542	3300019886	Soil	GTAIASNGPAAPIINYEPTGLNTDISMREGEPVVVGTLNAGPSGDAIILVVSAKRSQR
Ga0210377_103423701	3300021090	Groundwater Sediment	APVISYEATGLTTDISMHLGEPVVVGTLHVGPSGDAIILVMTAKRAQK
Ga0207653_101072211	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	FNYESTGLNTDISMREGEPVVVGTLHVGLSGDAIILVMSAKRSKQ
Ga0207682_101959132	3300025893	Miscanthus Rhizosphere	TGVSTDISMRESEPVIVGTLNIGPSGDAIILVVSAKRTQK
Ga0207684_109681891	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KAFPQINYEGTGLATDISMREGDPVVVGTLNVGPSGDAIILVVSAKRTQK
Ga0207684_111798772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SNGPAAPIINYEPTGLNTDISMREGEPVVVGTLNAGPSGDAIILVVSAKRSQR
Ga0207662_113422703	3300025918	Switchgrass Rhizosphere	VNYEQTGVSTDISMRESEPVIVGTLNIGPSGDAIILVV
Ga0207670_104068611	3300025936	Switchgrass Rhizosphere	TVAYENTGVSTDISMRESEPVIVGTLNIGPSGDAIILVVSAKRTPR
Ga0207670_113954261	3300025936	Switchgrass Rhizosphere	VGAVAVSGGVPATNYEPTGLATDISIREGEPVIVGTLNVGPSGDAIILVVSAKRTSR
Ga0207669_118898882	3300025937	Miscanthus Rhizosphere	ENTGLQTDISMREGEPVIVGTLNVGPSGGALILVVSAKRTTR
Ga0207689_107499761	3300025942	Miscanthus Rhizosphere	MPPAFNYEQTGVSTDISMREGEPVIVGTLNIGPSGDAIILVVSAKRTNK
Ga0207667_114113992	3300025949	Corn Rhizosphere	IAYENTGVFTDISMREAEPVIVGTLNIGPSGDAIILVVSAKRTPK
Ga0210102_10389771	3300025971	Natural And Restored Wetlands	VPAFNYENTGLATDISMRESEPVIVGTLNVGPSGEAIILVVSAKRTER
Ga0207641_115941521	3300026088	Switchgrass Rhizosphere	VAPNFNYQNTGLATDISMRETEPVIVGTLNVGPSGDAIILVVSAKRTAK
Ga0207676_104686322	3300026095	Switchgrass Rhizosphere	ASAPVFNYESTGLNTDISMREGEPVVVGTLHVGPSGDAIILVVSAKRSKQ
Ga0207675_1014088371	3300026118	Switchgrass Rhizosphere	AFPTINYENTGLQTDISIREGEPVIVGTLNVGPSGDAIILVVSSKRTNR
Ga0207698_101422681	3300026142	Corn Rhizosphere	VPATNYEPTGLATDISIREGEPVIVGTLNVGPSGDAIILVVSAKRTSR
Ga0257171_10574351	3300026377	Soil	SNGPMAPIINYESTGLNTDISMREGEPVIVGTLNIGPSGDAIILVMSARRTLK
Ga0209056_102155152	3300026538	Soil	APAAPIFNYEPTGLNTDISMREGEPVVVGTLNVGPSGDAIILVMSARRTK
Ga0207546_1049481	3300026806	Soil	VAPVINYESTGVSTDVSMREGEAVIVGTLNIGPSGDALILVVSAKRTQK
Ga0209683_103290501	3300027840	Wetland Sediment	TGTGFPVINYEATGLGTDISIREGEPAIVGTLTVGPSGDAIILVIAARRTLK
Ga0207428_101389361	3300027907	Populus Rhizosphere	GAVAPAFNYENTGLATDISMRESEPVIVGTMNIGPSGDAIILVVAAKRTQK
Ga0209382_116426692	3300027909	Populus Rhizosphere	IAPAFNYEPTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTPK
Ga0268264_125401221	3300028381	Switchgrass Rhizosphere	SPASAAVFNYESTGLNTDISMREGEPVVVGTLQVGPSGDAIILVMSAKRSKQ
Ga0307408_1022716622	3300031548	Rhizosphere	APTFNYETTGLATDISMRESEPVIVGTLNVGPSGDAIILVVSAKRTQK
Ga0310907_103128561	3300031847	Soil	PQINYEGTGLATDISMREGDPVVVGTLNVGPSGDAIILVVSAKRTQK
Ga0307407_101741042	3300031903	Rhizosphere	SLAANGAIAPAFNYEPTGLSTDISMREGEPVIVGTLNVGPSGDAIILVVSAKRTPK
Ga0310891_102461382	3300031913	Soil	AFPQINYEGTGLATDISMREGDPVVVGTLNVGPSGDAIILVVSAKRTQK
Ga0310812_100637211	3300032421	Soil	GAVTPAINYERTGVATDVSMREGEPVIVGTLNIGPSGDAIILVVSAKRTSR
Ga0310810_103761131	3300033412	Soil	PAFNYEPTGLSTDISMREAEPVIVGTLNVGPSGDAIILVVSARRTQK
Ga0364942_0219963_422_571	3300034165	Sediment	MAPIINYESTGLNTDISMREGEPVVVGTLNIGPSGDAIILVMSARRTLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences