Basic Information | |
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Family ID | F073994 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 120 |
Average Sequence Length | 78 residues |
Representative Sequence | MANPGSRRATAAPNAGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKA |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 120 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 83.33 % |
% of genes near scaffold ends (potentially truncated) | 20.00 % |
% of genes from short scaffolds (< 2000 bps) | 80.83 % |
Associated GOLD sequencing projects | 80 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.54 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (68.333 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.167 % of family members) |
Environment Ontology (ENVO) | Unclassified (37.500 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (60.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 43.40% β-sheet: 0.00% Coil/Unstructured: 56.60% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.54 |
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Pfam ID | Name | % Frequency in 120 Family Scaffolds |
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PF00072 | Response_reg | 29.17 |
PF02687 | FtsX | 17.50 |
PF02518 | HATPase_c | 16.67 |
PF12704 | MacB_PCD | 9.17 |
PF13188 | PAS_8 | 2.50 |
PF08546 | ApbA_C | 1.67 |
PF03354 | TerL_ATPase | 0.83 |
PF07813 | LTXXQ | 0.83 |
PF00877 | NLPC_P60 | 0.83 |
PF05635 | 23S_rRNA_IVP | 0.83 |
COG ID | Name | Functional Category | % Frequency in 120 Family Scaffolds |
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COG3678 | Periplasmic chaperone Spy, Spy/CpxP family | Posttranslational modification, protein turnover, chaperones [O] | 3.33 |
COG1893 | Ketopantoate reductase | Coenzyme transport and metabolism [H] | 1.67 |
COG0791 | Cell wall-associated hydrolase, NlpC_P60 family | Cell wall/membrane/envelope biogenesis [M] | 0.83 |
COG4626 | Phage terminase-like protein, large subunit, contains N-terminal HTH domain | Mobilome: prophages, transposons [X] | 0.83 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 68.33 % |
Unclassified | root | N/A | 31.67 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000033|ICChiseqgaiiDRAFT_c0768099 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 1512 | Open in IMG/M |
3300000559|F14TC_103362068 | Not Available | 501 | Open in IMG/M |
3300003267|soilL1_10182370 | All Organisms → cellular organisms → Bacteria | 2273 | Open in IMG/M |
3300003319|soilL2_10008413 | All Organisms → cellular organisms → Bacteria | 2731 | Open in IMG/M |
3300003319|soilL2_10127876 | All Organisms → cellular organisms → Bacteria | 1015 | Open in IMG/M |
3300003324|soilH2_10057111 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 3156 | Open in IMG/M |
3300003324|soilH2_10103071 | All Organisms → cellular organisms → Bacteria | 1706 | Open in IMG/M |
3300004114|Ga0062593_102220586 | All Organisms → cellular organisms → Bacteria | 615 | Open in IMG/M |
3300004156|Ga0062589_101746861 | Not Available | 622 | Open in IMG/M |
3300004480|Ga0062592_100206155 | All Organisms → cellular organisms → Bacteria | 1393 | Open in IMG/M |
3300004480|Ga0062592_100712823 | All Organisms → cellular organisms → Bacteria | 875 | Open in IMG/M |
3300005093|Ga0062594_103194706 | Not Available | 513 | Open in IMG/M |
3300005294|Ga0065705_10330275 | All Organisms → cellular organisms → Bacteria | 992 | Open in IMG/M |
3300005331|Ga0070670_102068413 | Not Available | 525 | Open in IMG/M |
3300005333|Ga0070677_10275892 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 845 | Open in IMG/M |
3300005336|Ga0070680_100214039 | All Organisms → cellular organisms → Bacteria | 1626 | Open in IMG/M |
3300005338|Ga0068868_100161224 | Not Available | 1852 | Open in IMG/M |
3300005341|Ga0070691_10618930 | Not Available | 641 | Open in IMG/M |
3300005343|Ga0070687_101100699 | Not Available | 581 | Open in IMG/M |
3300005343|Ga0070687_101120889 | All Organisms → cellular organisms → Bacteria | 576 | Open in IMG/M |
3300005344|Ga0070661_100955981 | All Organisms → cellular organisms → Bacteria | 709 | Open in IMG/M |
3300005356|Ga0070674_100016579 | All Organisms → cellular organisms → Bacteria | 4619 | Open in IMG/M |
3300005364|Ga0070673_102047799 | All Organisms → cellular organisms → Bacteria | 543 | Open in IMG/M |
3300005456|Ga0070678_101419058 | Not Available | 649 | Open in IMG/M |
3300005471|Ga0070698_102031924 | Not Available | 528 | Open in IMG/M |
3300005518|Ga0070699_100528650 | All Organisms → cellular organisms → Bacteria | 1073 | Open in IMG/M |
3300005543|Ga0070672_100009809 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 6617 | Open in IMG/M |
3300005548|Ga0070665_100080850 | All Organisms → cellular organisms → Bacteria | 3255 | Open in IMG/M |
3300005548|Ga0070665_100960380 | All Organisms → cellular organisms → Bacteria | 867 | Open in IMG/M |
3300005617|Ga0068859_101382680 | Not Available | 776 | Open in IMG/M |
3300006169|Ga0082029_1559924 | All Organisms → cellular organisms → Bacteria | 873 | Open in IMG/M |
3300006844|Ga0075428_101898086 | All Organisms → cellular organisms → Bacteria | 619 | Open in IMG/M |
3300006845|Ga0075421_100020410 | All Organisms → cellular organisms → Bacteria | 8327 | Open in IMG/M |
3300006845|Ga0075421_100045565 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 5557 | Open in IMG/M |
3300006845|Ga0075421_100208209 | All Organisms → cellular organisms → Bacteria | 2417 | Open in IMG/M |
3300006845|Ga0075421_100487614 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1466 | Open in IMG/M |
3300006845|Ga0075421_102660675 | Not Available | 518 | Open in IMG/M |
3300006847|Ga0075431_100567520 | All Organisms → cellular organisms → Bacteria | 1121 | Open in IMG/M |
3300006852|Ga0075433_10196600 | All Organisms → cellular organisms → Bacteria | 1793 | Open in IMG/M |
3300006853|Ga0075420_100521885 | All Organisms → cellular organisms → Bacteria | 1026 | Open in IMG/M |
3300006880|Ga0075429_100591031 | All Organisms → cellular organisms → Bacteria | 973 | Open in IMG/M |
3300006904|Ga0075424_100484732 | All Organisms → cellular organisms → Bacteria | 1320 | Open in IMG/M |
3300006918|Ga0079216_10024937 | All Organisms → cellular organisms → Bacteria | 2314 | Open in IMG/M |
3300007004|Ga0079218_13664095 | Not Available | 522 | Open in IMG/M |
3300009100|Ga0075418_10143634 | All Organisms → cellular organisms → Bacteria | 2539 | Open in IMG/M |
3300009100|Ga0075418_10588463 | All Organisms → cellular organisms → Bacteria | 1197 | Open in IMG/M |
3300009147|Ga0114129_10748473 | All Organisms → cellular organisms → Bacteria | 1251 | Open in IMG/M |
3300009147|Ga0114129_12801908 | Not Available | 579 | Open in IMG/M |
3300009148|Ga0105243_10985106 | Not Available | 844 | Open in IMG/M |
3300009156|Ga0111538_10448384 | All Organisms → cellular organisms → Bacteria | 1635 | Open in IMG/M |
3300009156|Ga0111538_11599518 | Not Available | 821 | Open in IMG/M |
3300009162|Ga0075423_10917540 | All Organisms → cellular organisms → Bacteria | 929 | Open in IMG/M |
3300009553|Ga0105249_13566227 | Not Available | 501 | Open in IMG/M |
3300009789|Ga0126307_10574797 | All Organisms → cellular organisms → Bacteria | 910 | Open in IMG/M |
3300009840|Ga0126313_10017851 | All Organisms → cellular organisms → Bacteria | 4663 | Open in IMG/M |
3300010036|Ga0126305_10004133 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 6866 | Open in IMG/M |
3300010038|Ga0126315_10356433 | All Organisms → cellular organisms → Bacteria | 912 | Open in IMG/M |
3300010045|Ga0126311_11348142 | Not Available | 594 | Open in IMG/M |
3300010166|Ga0126306_10395030 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1081 | Open in IMG/M |
3300010399|Ga0134127_11595206 | Not Available | 727 | Open in IMG/M |
3300010399|Ga0134127_11708130 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 705 | Open in IMG/M |
3300012212|Ga0150985_117982856 | All Organisms → cellular organisms → Bacteria | 902 | Open in IMG/M |
3300012891|Ga0157305_10170286 | Not Available | 602 | Open in IMG/M |
3300012898|Ga0157293_10314678 | Not Available | 523 | Open in IMG/M |
3300013306|Ga0163162_10708886 | Not Available | 1128 | Open in IMG/M |
3300014880|Ga0180082_1111191 | Not Available | 625 | Open in IMG/M |
3300015371|Ga0132258_10839271 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 2318 | Open in IMG/M |
3300015371|Ga0132258_12116681 | All Organisms → cellular organisms → Bacteria | 1414 | Open in IMG/M |
3300015373|Ga0132257_103588412 | Not Available | 565 | Open in IMG/M |
3300017792|Ga0163161_10862262 | All Organisms → cellular organisms → Bacteria | 765 | Open in IMG/M |
3300018073|Ga0184624_10123021 | All Organisms → cellular organisms → Bacteria | 1125 | Open in IMG/M |
3300018476|Ga0190274_10107694 | All Organisms → cellular organisms → Bacteria | 2238 | Open in IMG/M |
3300018476|Ga0190274_11693956 | Not Available | 726 | Open in IMG/M |
3300018481|Ga0190271_13008985 | All Organisms → cellular organisms → Bacteria | 565 | Open in IMG/M |
3300025315|Ga0207697_10315398 | All Organisms → cellular organisms → Bacteria | 694 | Open in IMG/M |
3300025885|Ga0207653_10456049 | All Organisms → cellular organisms → Bacteria | 502 | Open in IMG/M |
3300025893|Ga0207682_10014224 | All Organisms → cellular organisms → Bacteria | 3100 | Open in IMG/M |
3300025893|Ga0207682_10062152 | All Organisms → cellular organisms → Bacteria | 1565 | Open in IMG/M |
3300025907|Ga0207645_10216892 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia | 1261 | Open in IMG/M |
3300025918|Ga0207662_11348432 | Not Available | 507 | Open in IMG/M |
3300025920|Ga0207649_10773513 | All Organisms → cellular organisms → Bacteria | 748 | Open in IMG/M |
3300025925|Ga0207650_10384586 | All Organisms → cellular organisms → Bacteria | 1159 | Open in IMG/M |
3300025925|Ga0207650_11295372 | Not Available | 620 | Open in IMG/M |
3300025926|Ga0207659_10140565 | Not Available | 1874 | Open in IMG/M |
3300025926|Ga0207659_11893364 | Not Available | 505 | Open in IMG/M |
3300025933|Ga0207706_10141036 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis | 2120 | Open in IMG/M |
3300025933|Ga0207706_10574000 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 970 | Open in IMG/M |
3300025935|Ga0207709_10868042 | All Organisms → cellular organisms → Bacteria | 732 | Open in IMG/M |
3300025937|Ga0207669_11411404 | Not Available | 593 | Open in IMG/M |
3300025940|Ga0207691_10232635 | All Organisms → cellular organisms → Bacteria | 1595 | Open in IMG/M |
3300025945|Ga0207679_10528895 | All Organisms → cellular organisms → Bacteria | 1055 | Open in IMG/M |
3300025972|Ga0207668_10004593 | All Organisms → cellular organisms → Bacteria | 8122 | Open in IMG/M |
3300026121|Ga0207683_10040949 | All Organisms → cellular organisms → Bacteria | 4044 | Open in IMG/M |
3300027691|Ga0209485_1035099 | Not Available | 1227 | Open in IMG/M |
3300027909|Ga0209382_10023684 | All Organisms → cellular organisms → Bacteria | 7430 | Open in IMG/M |
3300027909|Ga0209382_10042644 | All Organisms → cellular organisms → Bacteria | 5434 | Open in IMG/M |
3300027909|Ga0209382_10477190 | All Organisms → cellular organisms → Bacteria | 1377 | Open in IMG/M |
3300027909|Ga0209382_10813473 | All Organisms → cellular organisms → Bacteria | 993 | Open in IMG/M |
3300027909|Ga0209382_11211611 | Not Available | 771 | Open in IMG/M |
3300028379|Ga0268266_10039128 | All Organisms → cellular organisms → Bacteria | 4039 | Open in IMG/M |
3300028778|Ga0307288_10109358 | All Organisms → cellular organisms → Bacteria | 1014 | Open in IMG/M |
3300031548|Ga0307408_101643871 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 611 | Open in IMG/M |
3300031716|Ga0310813_10510999 | All Organisms → cellular organisms → Bacteria | 1051 | Open in IMG/M |
3300031731|Ga0307405_10179193 | All Organisms → cellular organisms → Bacteria | 1520 | Open in IMG/M |
(restricted) 3300031825|Ga0255338_1000114 | All Organisms → cellular organisms → Bacteria | 358224 | Open in IMG/M |
3300031901|Ga0307406_10459210 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 1024 | Open in IMG/M |
3300031901|Ga0307406_10673746 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 861 | Open in IMG/M |
3300031901|Ga0307406_10785567 | All Organisms → cellular organisms → Bacteria | 802 | Open in IMG/M |
3300031901|Ga0307406_11076737 | All Organisms → cellular organisms → Bacteria | 693 | Open in IMG/M |
3300031908|Ga0310900_11392342 | Not Available | 589 | Open in IMG/M |
3300031938|Ga0308175_100414758 | All Organisms → cellular organisms → Bacteria | 1411 | Open in IMG/M |
3300031938|Ga0308175_101499299 | All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | 753 | Open in IMG/M |
3300031939|Ga0308174_10256104 | All Organisms → cellular organisms → Bacteria | 1362 | Open in IMG/M |
3300031939|Ga0308174_11449382 | Not Available | 588 | Open in IMG/M |
3300031995|Ga0307409_101603110 | Not Available | 679 | Open in IMG/M |
3300033550|Ga0247829_11538663 | Not Available | 549 | Open in IMG/M |
3300033550|Ga0247829_11636994 | Not Available | 531 | Open in IMG/M |
3300033551|Ga0247830_10480815 | All Organisms → cellular organisms → Bacteria | 975 | Open in IMG/M |
3300034148|Ga0364927_0063526 | Not Available | 984 | Open in IMG/M |
3300034664|Ga0314786_138816 | Not Available | 559 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 19.17% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 8.33% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 7.50% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 6.67% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.83% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 5.83% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 5.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.17% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 4.17% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 4.17% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.33% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.50% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.50% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.50% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.67% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.67% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.83% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.83% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.83% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.83% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.83% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.83% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.83% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.83% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
3300003319 | Sugarcane bulk soil Sample L2 | Environmental | Open in IMG/M |
3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012891 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2 | Environmental | Open in IMG/M |
3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300014880 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027691 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031825 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
3300034148 | Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17 | Environmental | Open in IMG/M |
3300034664 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
ICChiseqgaiiDRAFT_07680992 | 3300000033 | Soil | MADSVSRRRAVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLKKRSGDHPVIPHISRSKI* |
F14TC_1033620682 | 3300000559 | Soil | MAIPASRRTMAAPNGGVDGEIAMLLERVCARLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEHPAIRPLPPSAHDE* |
soilL1_101823702 | 3300003267 | Sugarcane Root And Bulk Soil | MTAPVDRRESSTPNESAEPDITLLLDRVCAQLPHEYTKQLVRDVVRLKLAMGLEREVRSYLKRRSGEYPAIPAIPQPRNDA* |
soilL2_100084132 | 3300003319 | Sugarcane Root And Bulk Soil | MATPVTRRRSKAPNVSDDADIALLLDRVCAQLPHTYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEYAAIPAAAEQPSE* |
soilL2_101278761 | 3300003319 | Sugarcane Root And Bulk Soil | MASSGSRRGNVAPNARVDGDIALLLDRVLPKVRNDFARQLVRDVVRLKLEMGFESDVRDYLKRRSGEYPTISALERVRRG* |
soilH2_100571113 | 3300003324 | Sugarcane Root And Bulk Soil | MTTSVARRSGLLPNGSVDADLAVLLDQVCAKLPHDYTRRLVRDVVRLKLEMGFVGEVRDYLQRRSGEYPAIPVLAVPQGDA* |
soilH2_101030712 | 3300003324 | Sugarcane Root And Bulk Soil | MGTPAIRENSAPNASIDGDIELLLDRVCARFPHDYTKQLVRDVVRLKLSMGFEGSVRDYLKRRSGEFPAVAVVQDDAE* |
Ga0062593_1022205862 | 3300004114 | Soil | IPTERGMASTGSRRGNVVPNAHVDGDIALLLDRVLPKVRNDFARQLVRDVVRLKLEMGFESDVRDYLKRRSGEYPAVHALGGGRSGN* |
Ga0062589_1017468611 | 3300004156 | Soil | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRARD* |
Ga0062592_1002061552 | 3300004480 | Soil | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP* |
Ga0062592_1007128232 | 3300004480 | Soil | MANPVARRKVAAPNAGFDGDIALLLERVCSKLPHDYTRQLVRDVVRLKMEMGFERDVRDYLKRRSGEYAAVQAIAGARSDKL* |
Ga0062594_1031947061 | 3300005093 | Soil | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRAPV* |
Ga0065705_103302751 | 3300005294 | Switchgrass Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRR |
Ga0070670_1020684131 | 3300005331 | Switchgrass Rhizosphere | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAATRGKP* |
Ga0070677_102758921 | 3300005333 | Miscanthus Rhizosphere | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRGKT* |
Ga0070680_1002140391 | 3300005336 | Corn Rhizosphere | MANPGSRRATAAPNVGLDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRRKT* |
Ga0068868_1001612241 | 3300005338 | Miscanthus Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRR |
Ga0070691_106189302 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MPNASPNGDIAMLLDRVCSTLTHDYTRQLVRDVVRLKLEMGLEGDVRDYLKRRSGEYPAFPGLARRRSE* |
Ga0070687_1011006991 | 3300005343 | Switchgrass Rhizosphere | MANPVVRRRPAAPNAGFEGDIALLLERVCSHIPHDYTRQLVRDVVRLKLEMGFEDSVRDYLKRRSGEYPVIAAPHSGKPS* |
Ga0070687_1011208892 | 3300005343 | Switchgrass Rhizosphere | MAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVP |
Ga0070661_1009559812 | 3300005344 | Corn Rhizosphere | MPNASPNGDIAVLLDRVCSTLPHDYTRQLVRDVVRLKLELGLEGDVREYLKRRSGEYPAFPSLTRRRSE* |
Ga0070674_1000165792 | 3300005356 | Miscanthus Rhizosphere | MAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRAPV* |
Ga0070673_1020477992 | 3300005364 | Switchgrass Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAG |
Ga0070678_1014190581 | 3300005456 | Miscanthus Rhizosphere | MPNASPNGDIAMLLDRVCSTLTHDYTRQLVRDVVRLKLEMGLEGDVRDYLKRRSGEYPAFPGLARRRPE* |
Ga0070698_1020319241 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MASPIFRRSSVTPNGSLNGDIPALLDRVCAQIPHDYTRQLVRDVVRLKLEMGFEGDVRAYLKRKSGEYPAVPARAGRPANEK* |
Ga0070699_1005286501 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MNNPFSRRANPAPNARLNGDIAVLLDRVCAQLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEYR |
Ga0070672_1000098092 | 3300005543 | Miscanthus Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALTRRAPV* |
Ga0070665_1000808502 | 3300005548 | Switchgrass Rhizosphere | MANSVSRRADAAPNAGLNGDLALLLERVCARLPNDYSRQLVRDVVRLKLSMGFDTDVQDYLKRRSGEYPAVPAVRTEKPS* |
Ga0070665_1009603802 | 3300005548 | Switchgrass Rhizosphere | MANPVVRRRPAAPNAGFEGDIALLLERVCSHIPHDYTRQLVRDVVRLKLEMGFEDSVRDYLKRRSGEYPVIAAPHPGKPS* |
Ga0068859_1013826802 | 3300005617 | Switchgrass Rhizosphere | MAAPTSRRADVLPNASLNGDIALLHDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRA |
Ga0082029_15599242 | 3300006169 | Termite Nest | MADPMSRRTRGVPNAAVDSDTAMLLERVCAQLTNDYARQLVRDVVHLKLELGFDVEVRDYLRRKSGDYPAVLRFPRD* |
Ga0075428_1018980862 | 3300006844 | Populus Rhizosphere | MANPGFRRTTAAPNAGFDGDIALLLERVCSRLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHRAVSAVPRDEKP* |
Ga0075421_1000204105 | 3300006845 | Populus Rhizosphere | MADSLSRRNRGAPNAAVDSDTALLLECVCAQLSNDYARQLVRDVVRLKLELGFDGEVRDYLKRRSGEYPAIRRLP* |
Ga0075421_1000455654 | 3300006845 | Populus Rhizosphere | MADPLQRRPRDAPNAAIDSDTAMLLERVCARLTNDYARQLVRDVVRLKLELGFDGEVRDYLIRKSGEYPAVRRRD* |
Ga0075421_1002082092 | 3300006845 | Populus Rhizosphere | MAIPASRRTMTAPNGGVDGEIAMLLERVCARLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEHPVIRPLPPSAHDE* |
Ga0075421_1004876142 | 3300006845 | Populus Rhizosphere | MADSVSRRRVVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLKKRSGEHPVIPQISRRSKI* |
Ga0075421_1026606751 | 3300006845 | Populus Rhizosphere | MATPVTRRGPLAPNASYDADIALLLDQVCAKLPNSYARQLVRGVVRLKLELGFEGDVRSYLRRRSGEYPAVSAAPQEADEQ* |
Ga0075431_1005675202 | 3300006847 | Populus Rhizosphere | MANAVPRRGRVAPNAGVDGDIALLLERVCARLPHDFTRQLVRDVVRLKLEMGYEGEVRDYLKRRSGEFRTIPSRPAKT* |
Ga0075433_101966002 | 3300006852 | Populus Rhizosphere | MAIPASRRTMAAPNGGVDGEIAMLLERVCARLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEHPVIRPLPPSAHDE* |
Ga0075420_1005218852 | 3300006853 | Populus Rhizosphere | MADPLQRRPRDAPNAAVDSDTAMLLERVCARLTNDYARQLVRDVVRLKLELGFDGEVRDYLIRKSGEYPAVRRRD* |
Ga0075429_1005910312 | 3300006880 | Populus Rhizosphere | MANPGFRRTTAAPNAGFDGDIALLLERVCSRLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP* |
Ga0075424_1004847322 | 3300006904 | Populus Rhizosphere | MATQTRRRTLAPNGSFDRDIATLLESVCAKLPHDYTRRLVRDVVRQKLEMGFEGEVVDYLKRRSGEYPAVPAATVEPIVEE* |
Ga0079216_100249373 | 3300006918 | Agricultural Soil | MADSVSRRGRPAPNAGPDGEIDLLLDRVCSRLRNDYTRQLVRDVVRLKLELGLDGDVRDYLKKRSGEHPAVPSSPRRKA* |
Ga0079218_136640951 | 3300007004 | Agricultural Soil | MANAVPRRGRVAPNAGVDGDIALLLERVCARLPHDFTRQLVRDVVRLKLEMGYEGEVRDYLTRRSGEYPAIPMRSSKS* |
Ga0075418_101436342 | 3300009100 | Populus Rhizosphere | LPQLSKERGMANPGFRRTTAAPNAGFDGDIALLLERVCSRLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHRAVSAVPRDEKP* |
Ga0075418_105884632 | 3300009100 | Populus Rhizosphere | MAAPNGGVDGEIAMLLERVCARLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEHPVIRPLPPSAHDE* |
Ga0114129_107484732 | 3300009147 | Populus Rhizosphere | MAMATQLTRRSSLAPNGSFDGEIASLLERVCAKLPHAYTRRLVRDVVRQKLEMGYEDNVRDYLKRRSGEYEAVAGVAESPSAES* |
Ga0114129_128019081 | 3300009147 | Populus Rhizosphere | MANPGSRRATAAPNAGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKA* |
Ga0105243_109851061 | 3300009148 | Miscanthus Rhizosphere | MAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALAPRAAV* |
Ga0111538_104483842 | 3300009156 | Populus Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAGRKP* |
Ga0111538_115995182 | 3300009156 | Populus Rhizosphere | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRRKS* |
Ga0075423_109175402 | 3300009162 | Populus Rhizosphere | MTAPNGGVDGEIAMLLERVCARLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEHPVIRPLPPSAHDE* |
Ga0105249_135662271 | 3300009553 | Switchgrass Rhizosphere | YGMAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGDYPAVPALARRAPV* |
Ga0126307_105747971 | 3300009789 | Serpentine Soil | MANPFSRRATAAPNAGLDGDSALLLERVCSRLPNDYARQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHRAVDPASKKP* |
Ga0126313_100178513 | 3300009840 | Serpentine Soil | MATTVSRRNDAASNAPAAGVEGDIALLLERVCARLPHDYTRQLVRDVVRLKLAMGFEGDVRDYLKRRSGEYPAVPQ* |
Ga0126305_100041335 | 3300010036 | Serpentine Soil | MATTVSRRNDAASNAPAAGVEGDIALLLERVCARLPHDYTRQLVRDVVRLKLAMGFEGDVRDYLKRRSGEYPAVPR* |
Ga0126315_103564332 | 3300010038 | Serpentine Soil | MADPVARRRPAAPNAGCEGDIAVLLERVCSRLPHDYTRQLVRDVVRLKLEMGFEDSVRDYLKRRSGEYPTITAPLPAKPS* |
Ga0126311_113481421 | 3300010045 | Serpentine Soil | MAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGDYPAAPALARRARD* |
Ga0126306_103950301 | 3300010166 | Serpentine Soil | MADSVSRRRRLAPNAGSDGEIDLLLERVCAQLRNEYTRQLLRDVVRLKLELGFEGDVRDYLKKRSGEHPTIRKV* |
Ga0134127_115952062 | 3300010399 | Terrestrial Soil | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEFPAVAAVRGKT* |
Ga0134127_117081301 | 3300010399 | Terrestrial Soil | LAPNASYDADIALLLDQVCAKLPNSYARQLVRGVVRLKLELGFEGDVRSYLRRRSGEYPAVSAAPQEADEQ* |
Ga0150985_1179828562 | 3300012212 | Avena Fatua Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGDVRDYLKRRSGEYPAVPALADRAPV* |
Ga0157305_101702861 | 3300012891 | Soil | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVNYLKRRSGEFPAVAAVRTKT* |
Ga0157293_103146781 | 3300012898 | Soil | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPAL |
Ga0163162_107088862 | 3300013306 | Switchgrass Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFAGEVRDYLKRRSGEYPAVPALARRARD* |
Ga0180082_11111911 | 3300014880 | Soil | MANPVARRRYAAPNAGVDGDIALLLERVCSKLQHDYTRQLVRDVVRLKIEMGFEGDVRDYLKRRSGEYPAVPAMAVVRSDKL* |
Ga0132258_108392712 | 3300015371 | Arabidopsis Rhizosphere | MPPSNSRRSSPMPNASPNGDIAVLLDRVCSTLPHDYTRQLVRDVVRLKLELGLEGDVRDYLKRRSGEYPAFPSLTRRRSE* |
Ga0132258_121166811 | 3300015371 | Arabidopsis Rhizosphere | MAMATPMTRRSSLAPNGSFDGEIASLLERVCAKLPHDYTRRLVRDVVRQKLEMGYEENVRDYLK |
Ga0132257_1035884121 | 3300015373 | Arabidopsis Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARAPV* |
Ga0163161_108622621 | 3300017792 | Switchgrass Rhizosphere | MAAPTSRRADVLPNASMNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRAPV |
Ga0184624_101230212 | 3300018073 | Groundwater Sediment | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRAPV |
Ga0190274_101076942 | 3300018476 | Soil | MANPGFRRTTAAPTAGFDGDIALLLERVCSRLQHDYTKQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHRAVSAAPRDEKP |
Ga0190274_116939561 | 3300018476 | Soil | MANPVARRRYAAPNAGVDGDIALLLERVCSKLPHDYTRQLVRDVVRLKIEMGFEGDVRDYLKRRSGEYPAVPAMAVARS |
Ga0190271_130089852 | 3300018481 | Soil | MANPVARRRYAAPNAGVDGDIALLLERVCSKLPHDYTRQLVRDVVRLKIEMGFEGDVRDYLKRRSG |
Ga0207697_103153982 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGDYPA |
Ga0207653_104560492 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP |
Ga0207682_100142246 | 3300025893 | Miscanthus Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRGKT |
Ga0207682_100621522 | 3300025893 | Miscanthus Rhizosphere | MPPSNSRRSSPMPNASPNGDIAMLLDRVCSTLTHDYTRQLVRDVVRLKLEMGLEGDVRDYLKRRSGEYPAFPGLARRRSE |
Ga0207645_102168921 | 3300025907 | Miscanthus Rhizosphere | MANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVGAAGRKS |
Ga0207662_113484321 | 3300025918 | Switchgrass Rhizosphere | MANPVVRRRPAAPNAGFEGDIALLLERVCSHIPHDYTRQLVRDVVRLKLEMGFEDSVRDYLKRRSGEYPVIAAPHSGKPS |
Ga0207649_107735131 | 3300025920 | Corn Rhizosphere | MPNASPNGDIAVLLDRVCSTLPHDYTRQLVRDVVRLKLELGLEGDVREYLKRRSGEYPAFPSLTRRRSE |
Ga0207650_103845861 | 3300025925 | Switchgrass Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRARD |
Ga0207650_112953722 | 3300025925 | Switchgrass Rhizosphere | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAA |
Ga0207659_101405651 | 3300025926 | Miscanthus Rhizosphere | MAAPTSRRADVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALAR |
Ga0207659_118933641 | 3300025926 | Miscanthus Rhizosphere | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRGKT |
Ga0207706_101410361 | 3300025933 | Corn Rhizosphere | GMANPGSRRATAAPNVGFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP |
Ga0207706_105740002 | 3300025933 | Corn Rhizosphere | MANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAATRGKP |
Ga0207709_108680421 | 3300025935 | Miscanthus Rhizosphere | MAAPTSRRAYVLPNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALAPRAAV |
Ga0207669_114114041 | 3300025937 | Miscanthus Rhizosphere | MANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVNYLKRR |
Ga0207691_102326352 | 3300025940 | Miscanthus Rhizosphere | MANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRGKT |
Ga0207679_105288952 | 3300025945 | Corn Rhizosphere | MPPSNSRRSSPMPNASPNGDIAVLLDRVCSTLPHDYTRQLVRDVVRLKLELGLEGDVREYLKRRSGEYPAFPSLTRRRSE |
Ga0207668_100045937 | 3300025972 | Switchgrass Rhizosphere | MANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP |
Ga0207683_100409492 | 3300026121 | Miscanthus Rhizosphere | MPNASPNGDIAMLLDRVCSTLTHDYTRQLVRDVVRLKLEMGLEGDVRDYLKRRSGEYPAFPGLARRRPE |
Ga0209485_10350993 | 3300027691 | Agricultural Soil | MADSVSRRGRPAPNAGPDGEIDLLLDRVCSRLRNDYTRQLVRDVVRLKLELGLDGDVRDYLKKRSGEHPAVPSSPRRKA |
Ga0209382_100236842 | 3300027909 | Populus Rhizosphere | MADSLSRRNRGAPNAAVDSDTALLLECVCAQLSNDYARQLVRDVVRLKLELGFDGEVRDYLKRRSGEYPAIRRLP |
Ga0209382_100426442 | 3300027909 | Populus Rhizosphere | MADPLQRRPRDAPNAAIDSDTAMLLERVCARLTNDYARQLVRDVVRLKLELGFDGEVRDYLIRKSGEYPAVRRRD |
Ga0209382_104771902 | 3300027909 | Populus Rhizosphere | MANAVPRRGRVAPNAGVDGDIALLLERVCARLPHDFTRQLVRDVVRLKLEMGYEGEVRDYLKRRSGEFRT |
Ga0209382_108134732 | 3300027909 | Populus Rhizosphere | MANPGFRRTTAAPNAGFDGDIALLLERVCSRLQHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEYAAVAAAGRKA |
Ga0209382_112116112 | 3300027909 | Populus Rhizosphere | MADSVSRRRVVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLTKRSGEHPAILQLSRRSKV |
Ga0268266_100391282 | 3300028379 | Switchgrass Rhizosphere | MANSVSRRADAAPNAGLNGDLALLLERVCARLPNDYSRQLVRDVVRLKLSMGFDTDVQDYLKRRSGEYPAVPAVRTEKPS |
Ga0307288_101093581 | 3300028778 | Soil | MAAPTSRRADVLTNASLNGDIALLLDRVCAGLPHDYTRQLVRDVVRLKLALGFEGEVRDYLKRRSGEYPAVPALARRAPV |
Ga0307408_1016438712 | 3300031548 | Rhizosphere | MAKTGSRGGNVVPNARVDGDIALLLDRVLPTVRNDFARQLVRDVVRLKLEMGFESDVRDYLKRRSGEYPAVSALSAERARRL |
Ga0310813_105109992 | 3300031716 | Soil | MASYATRRGSTTPNEKVDGDIALLLERVCAKLPHDYTRQLVRDVVRLKLELGFEGDVRDYLKRRSGEFPSIPAAPRHPRSS |
Ga0307405_101791932 | 3300031731 | Rhizosphere | MANPFSRRATAAPNAGLDGDSALLLERVCSRLPNDYARQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHRAVAPASKKP |
(restricted) Ga0255338_100011472 | 3300031825 | Sandy Soil | MATPVARRDGGAPNASLDADIALLLERVCARLPHDYTRQLVRDVVRLKLELGFDGDVRDYLKRRSGEYPAVPVLARTTRREG |
Ga0307406_104592102 | 3300031901 | Rhizosphere | MANPVARRRLAAPNAGFDGDIALLLERVCSKLPHDYTRQLVRDVVRLKLEMGFEGDVRDYLKRRSGEYPAVPALPGVRPDKL |
Ga0307406_106737461 | 3300031901 | Rhizosphere | MADSVSRRRVVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLKKRSGDHPAIPQISRRSKI |
Ga0307406_107855671 | 3300031901 | Rhizosphere | MANPFSRRATAAPNAGLDGDSALLLERVCSRLPNDYARQLVRDVVRLKLEMGFDGDVVDYLKRRSGEHCAVAPASKKP |
Ga0307406_110767372 | 3300031901 | Rhizosphere | MANPVARSRPAAPNAGLEGDIGLLLERVCSRLPHDYTRQLVRDVVRLKLEMGFEDSVRDYLKRRSG |
Ga0310900_113923421 | 3300031908 | Soil | MPQLSTGRGMANPFSRRATRAPNAGFDGDIALLLEQVCSRLPHDYTRQLVRDVVRLKLEMGFDGDVVDYLKRRSGEFPAVAAVRRKT |
Ga0308175_1004147582 | 3300031938 | Soil | MPPSNSRRSSPMPNASPNGDIAVLLDRVCSTLPHDYTRQLVRDVVRLKLELGLEGDVRDYLKRRSGEYPAFPGLTRRRPE |
Ga0308175_1014992991 | 3300031938 | Soil | IASPHLSPGTQMTTSVTRRSGITPNGGVDADLATLLEQVCARLPHDYTRRLVRDVVRLKLEMGFVGDVRDYLERRSGDYPAVSPLPSQRGDS |
Ga0308174_102561042 | 3300031939 | Soil | MPPSNPPRRSSPVPNAILNSDIAVLLDRVCSHLPHGYTRQLVRDVVRLKLELGFDGDVRDYLKRRSGEYPAVAATKRRQFE |
Ga0308174_114493821 | 3300031939 | Soil | MPNASPNGDIAMLLDRVCSTLTHDYTRQLVRDVVRLKLEMGLEGDVRDYLKRRSGEYPAFPGLTRRRSE |
Ga0307409_1016031101 | 3300031995 | Rhizosphere | MAKTGSRGGNVVPNARVDGDIALLLDRVLPTVRNDFARQLVRDVVRLKLEMGFESDVRDYLERRSGEYPAVSALSAERTRRF |
Ga0247829_115386631 | 3300033550 | Soil | MANPVSRRGRLTPNAGVDGDIALLLERVCARIPHDYTKQLVRDVVRLKLEMGYDGEVRDYLKRRSGEFPAILPRPKRA |
Ga0247829_116369941 | 3300033550 | Soil | QTGCGMADSVSRRRVVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLKKRSGDHPVIPHISRSKI |
Ga0247830_104808152 | 3300033551 | Soil | MADSVSRRRVVPNAGSGGEIDLLLDHVCSRLRNDYTRQLVRDVVRLKLEMGFESDVRDYLKKRSGEHPVIPQISRRSKI |
Ga0364927_0063526_546_794 | 3300034148 | Sediment | MANPVARRRYAAPNAGVDGDIALLLERVCSKLQHDYTRQLVRDVVRLKIEMGFEGDVRDYLKRRSGEYPAVPAMAVARSDKL |
Ga0314786_138816_4_240 | 3300034664 | Soil | MANPGSRRATAAPNVVFDGDIALLLERVCSHLQHDYTRQLVRDVVRLKLEMGFDGEVVDYLKRRSGEYAAVAAAGRKP |
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