Metagenome Family F073987

Basic Information
Family ID	F073987
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	46 residues
Representative Sequence	LRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSAYLRAAK
Number of Associated Samples	107
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.13 %
% of genes near scaffold ends (potentially truncated)	28.33 %
% of genes from short scaffolds (< 2000 bps)	32.50 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (69.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.667 % of family members)
Environment Ontology (ENVO)	Unclassified (28.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.93% β-sheet: 0.00% Coil/Unstructured: 55.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00174	Oxidored_molyb	68.33
PF03404	Mo-co_dimer	15.83
PF14357	DUF4404	2.50
PF00890	FAD_binding_2	1.67
PF07439	DUF1515	0.83
PF00781	DAGK_cat	0.83
PF07043	DUF1328	0.83
PF03544	TonB_C	0.83
PF00326	Peptidase_S9	0.83
PF02806	Alpha-amylase_C	0.83
PF00753	Lactamase_B	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	68.33
COG3915	Uncharacterized conserved protein	Function unknown [S]	68.33
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.67
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.83
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.83
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.83
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
All Organisms	root	All Organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
cellular organisms	root	All Organisms → cellular organisms	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	26.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	9.17 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	9.17 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	8.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.50 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	8.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.50 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	8.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.50 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.17 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	8.33 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.50 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119103105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300004463\|Ga0063356_101908558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	896	Open in IMG/M
3300004479\|Ga0062595_100629234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	844	Open in IMG/M
3300004633\|Ga0066395_10168869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1123	Open in IMG/M
3300005164\|Ga0066815_10031066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	803	Open in IMG/M
3300005289\|Ga0065704_10339971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	825	Open in IMG/M
3300005290\|Ga0065712_10339854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	795	Open in IMG/M
3300005439\|Ga0070711_101191123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300005535\|Ga0070684_101805597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300005555\|Ga0066692_10135618	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300005558\|Ga0066698_10993003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	533	Open in IMG/M
3300006034\|Ga0066656_10447262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300007004\|Ga0079218_11232262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	780	Open in IMG/M
3300007788\|Ga0099795_10273063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	736	Open in IMG/M
3300010325\|Ga0134064_10476628	Not Available	513	Open in IMG/M
3300010376\|Ga0126381_101259741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1069	Open in IMG/M
3300010376\|Ga0126381_105073054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	504	Open in IMG/M
3300012203\|Ga0137399_10885276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300012948\|Ga0126375_11473918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300012988\|Ga0164306_11898551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
3300013297\|Ga0157378_11621424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300013308\|Ga0157375_12674432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	596	Open in IMG/M
3300016294\|Ga0182041_11380810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300016319\|Ga0182033_10390537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1174	Open in IMG/M
3300018054\|Ga0184621_10056955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1318	Open in IMG/M
3300024254\|Ga0247661_1073766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	636	Open in IMG/M
3300025898\|Ga0207692_10125401	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300025929\|Ga0207664_10655445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	944	Open in IMG/M
3300025934\|Ga0207686_11324858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	592	Open in IMG/M
3300026023\|Ga0207677_10792330	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300026523\|Ga0209808_1196830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	677	Open in IMG/M
3300027907\|Ga0207428_10915826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	619	Open in IMG/M
3300028708\|Ga0307295_10108937	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300028884\|Ga0307308_10156715	Not Available	1091	Open in IMG/M
3300031469\|Ga0170819_12892741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	528	Open in IMG/M
3300031474\|Ga0170818_105985593	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300031833\|Ga0310917_10286596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1112	Open in IMG/M
3300031942\|Ga0310916_11003062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	697	Open in IMG/M
3300032179\|Ga0310889_10225923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	24.17%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.83%
Plants	Host-Associated → Plants	24.17%
Aquatic	Environmental → Aquatic	4.17%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Sediment	Environmental → Aquatic → Sediment	3.33%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00791370	2170459016	Switchgrass, Maize And Mischanthus Litter	LLERVQALRNSLSRMSPDQLKLNEITEDDRRVQMSLYEKLSASLRAVK
JGI1027J12803_1019692492	3300000955	Soil	ALRDTLSKMSPDQLKVNEITEDDRHVQMNLYEKLSASLRAAK*
JGI10216J12902_1137992292	3300000956	Soil	LLQRVEALRESLSKMSVDQLKVNEITEEDRRVQMSLYDKLSVYLRAAK*
JGI24036J26619_100116071	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDQLKVNEITEDDRRVQMSLYEKLSGSLRAAK*
C688J35102_1191031052	3300002568	Soil	VQGSRQKLLERVEALRDALSKMSPDQLKVNEITQDDRRVQISLYEKLSAYIRAAK*
Ga0063356_1019085581	3300004463	Arabidopsis Thaliana Rhizosphere	NRQELLERVQALRNSLSRMSPDQLKVNEITDDDRRVQMSLYEKLSAELRAAK*
Ga0062595_1006292342	3300004479	Soil	QGSRQELLERVEALRDALSKMSPDQLRVNEITEDDRRVQMSLYEKLAAFLRAAK*
Ga0066395_101688692	3300004633	Tropical Forest Soil	RQELLKRVEELRDTLSKMSPDQLKVNEITEDDRRVQMSLYEKLSASLRAAK*
Ga0066815_100310661	3300005164	Soil	QELLKRVESLRDALSRMSPDQLKVNEITEDDRRVQMSLYEKLSAFLRAAK*
Ga0066685_109966602	3300005180	Soil	LRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSAYLRAAK*
Ga0066678_103946602	3300005181	Soil	QRVEALRDALSKMSPDQLKVNEIMEDDRRVQMSLYEKLSAALLAAK*
Ga0065704_103399712	3300005289	Switchgrass Rhizosphere	LLQRVEVLRDALSKMSPDQLKANKITENDRRVQMSLYEKLSSFVRATK*
Ga0065712_103398542	3300005290	Miscanthus Rhizosphere	QGSRQELLQRVEALRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSSFLRPAK*
Ga0065715_108552062	3300005293	Miscanthus Rhizosphere	LLQRVEALRDALSKMSPDQLKANEITEDDRHVQMSLYEKLSAYLGAVK*
Ga0065707_100176211	3300005295	Switchgrass Rhizosphere	RDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSASLRAAK*
Ga0066388_1039355013	3300005332	Tropical Forest Soil	QRVEALRDALRKMSSDQLKVNEITEDDRRVQMSLYEKLSAYLGSAE*
Ga0066388_1055182812	3300005332	Tropical Forest Soil	RVDIVRDALSKMSPDQLKPNEIAEEDRRVQMSSYEKLCAFLRAAK*
Ga0068869_1015801991	3300005334	Miscanthus Rhizosphere	LRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSSFLRPAK*
Ga0070659_1000230246	3300005366	Corn Rhizosphere	RDALSKMSPDQLKVNEITEDDHRVQMSLYEKLSADLRAAK*
Ga0070711_1011911232	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GSPQELLQRVEALRDALSKMSAGQLKVNEITEDDRRVQMSLYEKLSAYLRAAK*
Ga0070705_1006959011	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RQELLQRVDALRDSLAKMSSEQLKVNEITEDDRRVQMSLYEKLSAYLRAAK*
Ga0070705_1016901071	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LRDALSKMSPDQLKVNEITEDDHRVQMSLYEKLSADLRAAK*
Ga0066681_109145811	3300005451	Soil	QRVEALRDALSKMSPEQLKVNEITEDDRRVQMSLYEKLSAFLTAEK*
Ga0070684_1018055971	3300005535	Corn Rhizosphere	QGSRDELLQRVEALRDTLRQMSADQLKVNEITEDDRRSQLALYEKLCTYLRTPK*
Ga0066692_101356181	3300005555	Soil	SREELLERVMALRDALNRMSPDQLKVNEINEEDRRVQLELYEKLSAYLRTPK*
Ga0066698_109930031	3300005558	Soil	REELLERVMALRDALSRMSPDQLKVNEINEEDRRTQLELYNKLGAYLRTSK*
Ga0068856_1022732991	3300005614	Corn Rhizosphere	RVEALRDALGKMSPDQLKVHEITEDDRRVQMSLYQKLSAYLSAAK*
Ga0066656_104472623	3300006034	Soil	EELLERVMALRDALSRMSPDQLKVNEINEEDRRVQLELYEKLSAYLRTSK*
Ga0082029_18075321	3300006169	Termite Nest	ALRNALSRMSPEQLKVNEITEDDRRVQMSLYEKLSAYLRAAK*
Ga0070716_1006202432	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VDALRDSLAKMSSDQLKVNEITEDDRRVQMSLYEKLSAYLRAAK*
Ga0066665_113152661	3300006796	Soil	SKMSTDQLKVNEITQDDRRVQISLYEKLSAFLRAAK*
Ga0079218_112322622	3300007004	Agricultural Soil	SREELLERVQALRDSLKQMSGAELKRNEIDETDRQVQLALYDKLCGDLASAK*
Ga0099795_102730632	3300007788	Vadose Zone Soil	GSRQELLQRVEALRDALTKMSPDQLKVNEITQDDRRVQMSLYEKLSAFLRAAK*
Ga0066710_1026507201	3300009012	Grasslands Soil	VEALRDALSRMSPDQLEVNEITEDDRRVQMSLYEKLSAFLRAAK
Ga0111539_117546502	3300009094	Populus Rhizosphere	EALRDALCRMSPDQLKVNEIIDDDRQVQMSLYQKLSAYLRAAK*
Ga0105243_130898711	3300009148	Miscanthus Rhizosphere	QRVEALRDALSKMSPDQLKVNEITEDDHRVQMSLYEKLSAYLGAVK*
Ga0126380_101070183	3300010043	Tropical Forest Soil	VEALRDALGKMSPDQLKVNEITEDDRRVQMSLYDKLCASLRAAK*
Ga0126382_110859261	3300010047	Tropical Forest Soil	RVEALRDALGKMSPDQLKLNEISQDDRRVQMSLYEKLSSSLGAAK*
Ga0134064_104766282	3300010325	Grasslands Soil	LQGSREELLERVMALRDALNRMSPDQLKVNEINEEDRRVQLELYEKLSAYLRTPK*
Ga0126370_126705092	3300010358	Tropical Forest Soil	LSKMSADQLKMNEITEEDRRVQMSLYEKLSAYLRAGK*
Ga0126376_104037503	3300010359	Tropical Forest Soil	RDALRKMSPEQLKVNEITEDDRGVQMSLYEKLSAYLRAAK*
Ga0126378_121363881	3300010361	Tropical Forest Soil	DALSKMSPDQLRVNEITEDDRHVQTGLYEKLSAFLRAAK*
Ga0126377_124036751	3300010362	Tropical Forest Soil	KMSPDQLKLNEISENDRGVQMSLYEKLSAYLRAAK*
Ga0105239_127943342	3300010375	Corn Rhizosphere	LGKMSAEQLKVNEITDDDRRIQMILYEKLSAALRAAK*
Ga0126381_1012597413	3300010376	Tropical Forest Soil	VQGSRQELLQRVEGLRDALGKMSPEQLKVNEITEDDRRVQMSLYEKLSSSLRAA
Ga0126381_1050730541	3300010376	Tropical Forest Soil	SREELLQRVEALRDSLAKMSSDQLKVNEITEEDRRVQMSLYEKLAAYLRTAA*
Ga0134124_103566282	3300010397	Terrestrial Soil	DALRDSLAKMSSEQLKVNEITEDDRRVQVSLYEKLSAYLRAAK*
Ga0137399_108852761	3300012203	Vadose Zone Soil	GSRQELLQRVEALRDALTKMSPDQLKVNEVTGDDRRVQMSLYEKLSAFLRAAK*
Ga0137362_106372101	3300012205	Vadose Zone Soil	RVDALRDALAKMSHDQLKVHEITGDDRRGQMSLYEKLSASLRAAK*
Ga0137376_117659162	3300012208	Vadose Zone Soil	GKMSPDQLKVHEITEDDRRVQMSLYEKLSASLRAAK*
Ga0137370_103943972	3300012285	Vadose Zone Soil	LRDALSKMSPDQLKVNEITKDDRRVQISLYEKLSAYVRAAK*
Ga0157351_10094132	3300012501	Unplanted Soil	QRAQALRDALSKMSPDQLKVHEITEDDRRVQMSLYEKLSAYLGAVK*
Ga0126375_114739181	3300012948	Tropical Forest Soil	QGSHQELLQRVEALRESLSKMSADQLKVNEITEEDRRLQMSLYDKLSMYLRAAK*
Ga0164303_103990161	3300012957	Soil	KISPDQLKVHEITEEDRRVKMSLYQKLSAYLSAAK*
Ga0164301_114417332	3300012960	Soil	RVEALRDALSKMSAGQLKVNEITEDDRRVQMSLYEKLSAFLRTAK*
Ga0164302_111546352	3300012961	Soil	QRVEALRNALSKMSLEQLKVNEITEDDRRIQMILYEKLSAALRAAK*
Ga0164307_102339252	3300012987	Soil	ALRDALGKMSPDQLKVNEITEDDRRVQMSLYEKLSAFLRTAK*
Ga0164307_112892011	3300012987	Soil	LSKMSPDQLKINEITEDDRRVQMSLYEKLSASLRAAK*
Ga0164306_118985511	3300012988	Soil	QELLQRVEALGDALGKMSPDQLKVNEITQDDRRVQMSLYEKLSAYLRAAK*
Ga0157369_121179192	3300013105	Corn Rhizosphere	GRMSPEQLKVNEITEDDRRVQMSLYQKLSACLSAAK*
Ga0157374_109814852	3300013296	Miscanthus Rhizosphere	LGRMSPDQLKVNEITEDDRRVQMSLYEKLSAYLSAAK*
Ga0157374_122951071	3300013296	Miscanthus Rhizosphere	MSPEQLKVNEITDDDRRIQMILYEKLSAALRGAK*
Ga0157378_116214241	3300013297	Miscanthus Rhizosphere	SPQELLQRVEALRAALGRMSPDQLKVNEITEDDRRVQMSLYEKLSACLTAAK*
Ga0157372_118820292	3300013307	Corn Rhizosphere	QELLQRVDALRNALSKMSPDQLKVNEITEDDRRVQMSLYEKLSGSLRAAK*
Ga0157375_126744322	3300013308	Miscanthus Rhizosphere	QELLQRVEALQDALSKMSPEQLQVHEISEDDRRVQMSLYEKLSACLRAAK*
Ga0137418_104151162	3300015241	Vadose Zone Soil	RDALGKMSPDQLKMHEITEDDRRVQMSLYEKLSASLRAAK*
Ga0134073_101770972	3300015356	Grasslands Soil	LLQRVEALRDALSKMSPEQLKVNEITEDDRRVQMSLYEKLSVFLSAAK*
Ga0132258_133435311	3300015371	Arabidopsis Rhizosphere	MPPDQLKVNEITEDDRRVQISLYEKLSTSLRAPK*
Ga0132257_1004584573	3300015373	Arabidopsis Rhizosphere	LRDALSKMSPDQLKVNEITEDDRRVQISLYEKLSAFVRAAK*
Ga0132255_1058190022	3300015374	Arabidopsis Rhizosphere	LQRVEALRNALSKMSPDQLKTNEITEDDRRVQMSLYERLSAYLGAVK*
Ga0182041_113808101	3300016294	Soil	QELLQRVDALRDALGKMSPDQLKVNEITEDDRRVQMSLYEKLSTSLRAAK
Ga0182033_103905372	3300016319	Soil	VHGDRQELVQRVDALRDALSRMSPDQLKVNEITENDRRVQMSLHEKLSSSLRAAK
Ga0182032_112240521	3300016357	Soil	ALRDTLSKMSPDQLKVNEITENDRRVQMSLYEKLSASLGAAK
Ga0184621_100569551	3300018054	Groundwater Sediment	QGSRQELLQRVEALRDALSKMSPEQLKVNEITEDDRRVQMSLYEKLSASLRAVK
Ga0184612_103112332	3300018078	Groundwater Sediment	LSKMSPDQLKVHEITEDDRRVQMSLYEKLSASLRAAK
Ga0184625_102814191	3300018081	Groundwater Sediment	RDALSKMSPDQLKVHEITEDDRRVQISLYEKLSAYLRAAK
Ga0066667_110214151	3300018433	Grasslands Soil	RGALLQSVKLLRDALARMSPDQLKLNEITEEDRRVQMSLYEKMSAYLHAAK
Ga0066669_109133572	3300018482	Grasslands Soil	LQRVDALRDALSKMSPDQLKVNEITEEDRRVQMSLYEKLSVYLRAAK
Ga0066669_124281632	3300018482	Grasslands Soil	LQRVDALRDALSKMSPDQLKVNEITEEDRRVQMSLYEKLSASLRAAK
Ga0193693_10656712	3300019996	Soil	GKMSSEQLKVHEITEDDRRVQMSLYEKLSAYLRAAK
Ga0193721_10199271	3300020018	Soil	KALRDALSKMAPDQLKVNEITEDDRRVQMSLYEKLSASLRAAK
Ga0193724_10875552	3300020062	Soil	EALRDALSKMSPEQLKVHEITEDDRRVQMSLYEKLSAYLRAAK
Ga0210382_101957422	3300021080	Groundwater Sediment	SKMSPDQLKVHEITEDDRRVQMSLYEKLSASLRAAK
Ga0126371_116014391	3300021560	Tropical Forest Soil	RDALGKMSPEQLKVNEITEDDRRVQMSLYEKLSSSLRAAK
Ga0126371_134448991	3300021560	Tropical Forest Soil	LKRVEELRDTLSKMSPDQLKVNEITEDDRRVQMSLYEKLSASLRAAK
Ga0222622_107046832	3300022756	Groundwater Sediment	ALSKMSPAQLKMNEIKEDDRRVQMSLYEKLSASLRSAR
Ga0193714_10422441	3300023058	Soil	EALRDALSRMSPDQLKVNEITEDDRGAQMILYKKLSADLHTAK
Ga0247661_10737661	3300024254	Soil	VQGNRQELLQRVDALRDSLAKMSSDQLKVNEITEDDRRVQMSLYEKLSAYLRAAK
Ga0207697_100296903	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VEALQDALSKMSPEQLKVHEISEDDRRVQMSLYKKLSAFLQVAK
Ga0207697_103574082	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	GDSLTKMSPDQLKVNEITEEDRRVQKSLYEKLSAYLRSAN
Ga0207692_101254013	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RQELLQRVEGLRDALSKMSPEQLKVHEITEDDRRVQMSLYEKLSAYLRAPK
Ga0207693_109789982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LQQRAEALRDALSKMSPEQLKVNEITEDDRRVQMSLYEKLSAALLAAK
Ga0207664_106554452	3300025929	Agricultural Soil	GSRHELLQWVGALRDALGRMSPDQLKVNEITEDDRRVQMSLYEKLSAFLSAAK
Ga0207701_104043361	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RDALSKMSPDQLKANEITEDDRHVQMSLYEKLSAYLGAVK
Ga0207701_116141402	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GRMSPDQLKVNEITEDDRRVQMSLYEKLSAYLSAAK
Ga0207690_103233232	3300025932	Corn Rhizosphere	ELLQRVEALRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSSFLRPAK
Ga0207690_108150442	3300025932	Corn Rhizosphere	QRVEALRDALSKMSPDQLKVNEITEDDHRVQMSLYEKLSADLRAAK
Ga0207686_113248582	3300025934	Miscanthus Rhizosphere	RHELLQRVGALRDGLSRMSPDQLKVNEITENDRRVQISLYEKLSAFLSAAK
Ga0207661_105502861	3300025944	Corn Rhizosphere	VDALRDALSKMSPDQLKVNEITEDDRRVQMSLYEKLSGSLRAAK
Ga0207712_103437562	3300025961	Switchgrass Rhizosphere	QRIEALRDALSKMSPDQLKANEITEDDRHVQMSLYEKLSAYLGAVK
Ga0207712_106263972	3300025961	Switchgrass Rhizosphere	RVDALRNALSKMSPDQLKVNEITEDDRRVQMSLYEKLSGSLRAAK
Ga0207677_107923301	3300026023	Miscanthus Rhizosphere	PGYLVQGSRDELLQRVESLRDVLRQMSADQLKVNEITEEDRRIQLALYEKLCAYLRTPK
Ga0207676_109070461	3300026095	Switchgrass Rhizosphere	LQDALSKMSPEQLKVHEISEDDRRVQMSLYKKLSAFLQVAK
Ga0209808_11968301	3300026523	Soil	VQGSRQELLERVEALRDALSKMSPDQLKVNEITGDDRRVQMSLYEKLSAYLRAAK
Ga0209808_12396071	3300026523	Soil	LSKMSPDQLKVNEITQDDRRVQISLYEKLSAYIRAAK
Ga0207509_1062251	3300026816	Soil	VDALRESLAKMSSDQLKVNEITEDDRRVQMSLYEKLSAYLRAAK
Ga0207428_109158261	3300027907	Populus Rhizosphere	GSRQELLQRVEALRDALGKMSPEQLKVHEITEDDRRVQMSLYKKLSASLQAAK
Ga0307295_101089373	3300028708	Soil	RDELLQRVEALRDALRQMSAEQLKVNEITEDDRRIQLALYEKLCAYLRTPK
Ga0307323_103216022	3300028787	Soil	ELLQRVEALRDALRQMSAEQLKVNEITEDDRRIQLALYEKLCAYLRTPK
Ga0307308_101567152	3300028884	Soil	SREELLQRVEGLRDALSRMPPDQLKVNEITEDDRRVQMSLYEKLSASLRSAK
Ga0170819_128927412	3300031469	Forest Soil	GSRQELLQRVEALRDALTKMSADQLKVHEITEDDRRVQMSLYEKLSASLRAVK
Ga0170818_1059855933	3300031474	Forest Soil	AQGSRQELLQRVEGLRDALSKMSPEQLKVHEITEDDRRVQMSLYEKLSAYLRAPK
Ga0170818_1068592391	3300031474	Forest Soil	KMSPDQLKVHEITEDDRRVQMSLYEKLSAFLRTAK
Ga0307469_100170661	3300031720	Hardwood Forest Soil	GDALSKMSPDQLKTNEITEDDRHVQMSLYEKLSAYLRAAG
Ga0310917_102865962	3300031833	Soil	VHGDRQELVQRVDALRDALSRMSPDQLKVNEIAENDRRVQMSLHEKLSSSLRAAK
Ga0306921_111405431	3300031912	Soil	QRVDALRDALSRMSPDQLKVNEITENDRRVQMSLHEKLSSSLRAAK
Ga0310916_110030622	3300031942	Soil	VHGDRQELVQRVDALRDALSRMSPDQLKVNEITENDRRFQMSLHEKLSSSLRAAK
Ga0306922_100563545	3300032001	Soil	DALSRMSPDQLKVNEIAENDRRVQMSLHEKLSSSLRAAK
Ga0310889_102259231	3300032179	Soil	SREQLLQRVEALRNALSKMSPDQLKVNEITEDDRRVQMSLYEKLSAYLGAVK
Ga0310811_111143311	3300033475	Soil	RVQALRNSLSRMSPDQLKVNEITEDDRRVQMSLYEKLSASLGAVK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073987

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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