Metagenome / Metatranscriptome Family F073983

Basic Information
Family ID	F073983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	56 residues
Representative Sequence	LLILRKLGFSILMLGLALPVWSADRPGTISGYVRGATGIPQMGAMVEVLGAAAHSLKV
Number of Associated Samples	108
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.18 %
% of genes near scaffold ends (potentially truncated)	88.33 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (82.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (42.500 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (86.667 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1Ga0006867J43190_1143082 2JGI25613J43889_101640591 3JGI26341J46601_102257391 4JGI26342J46808_10315731 5Ga0006843J48913_1087912 6Ga0006866J48919_1142292 7Ga0006841J48915_1106602 8Ga0062385_102291872 9Ga0058882_10074792 10Ga0058897_110397561 11Ga0068919_14038061 12Ga0068968_14810262 13Ga0068968_14851421 14Ga0068971_15099811 15Ga0068984_11015612 16Ga0068940_11747621 17Ga0068975_12380972 18Ga0068964_12597742 19Ga0068918_12650041 20Ga0068925_13385621 21Ga0068930_13994712 22Ga0068963_13985561 23Ga0062388_1021088781 24Ga0072321_11847742 25Ga0072321_11848981 26Ga0072328_11803192 27Ga0072327_12762702 28Ga0070733_108913141 29Ga0070733_109252331 30Ga0070732_105112941 31Ga0070766_103584882 32Ga0070766_105318721 33Ga0075018_100832341 34Ga0063829_14568581 35Ga0099830_100573581 36Ga0099827_101351361 37Ga0099792_112747172 38Ga0116224_104734321 39Ga0099796_102699642 40Ga0126381_1019429071 41Ga0126346_12562451 42Ga0138553_1587611 43Ga0138556_1653212 44Ga0138571_1311452 45Ga0138531_1642042 46Ga0138597_10363821 47Ga0138582_10888511 48Ga0138537_10276832 49Ga0138537_10423651 50Ga0138524_10600801 51Ga0138594_11379861 52Ga0138599_11120071 53Ga0138595_10134522 54Ga0138584_10690842 55Ga0138559_10009871 56Ga0138559_10913052 57Ga0138555_10611082 58Ga0138555_11667721 59Ga0138572_11004211 60Ga0138565_10519591 61Ga0138565_11482462 62Ga0138560_11875722 63Ga0138562_10640492 64Ga0138581_12138371 65Ga0138564_10909962 66Ga0138570_10257741 67Ga0138573_10946661 68Ga0150983_124652972 69Ga0138532_10608551 70Ga0137407_118694171 71Ga0182015_103078091 72Ga0187766_105542152 73Ga0184597_1071012 74Ga0184589_1206341 75Ga0184595_1200582 76Ga0184598_1013681 77Ga0184598_1377681 78Ga0184586_1186661 79Ga0137408_10819642 80Ga0210403_106992961 81Ga0210399_106823201 82Ga0210400_101337461 83Ga0210405_100554863 84Ga0210405_106495581 85Ga0210405_109825142 86Ga0210389_102317532 87Ga0210402_104791191 88Ga0210409_101656712 89Ga0222728_10435452 90Ga0242651_10114231 91Ga0242663_10144041 92Ga0242663_11169582 93Ga0242669_11039691 94Ga0242670_10762881 95Ga0242653_10314272 96Ga0242678_10294132 97Ga0242654_100267381 98Ga0247537_1034172 99Ga0247547_1009822 100Ga0209421_11187632 101Ga0209219_11491801 102Ga0209905_10817853 103Ga0209333_10719591 104Ga0209579_106318231 105Ga0222749_105175031 106Ga0311337_109455502 107Ga0210288_10878421 108Ga0316363_100617031 109Ga0310039_100661071 110Ga0307482_12254941 111Ga0265745_10083672 112Ga0265742_10093691 113Ga0316049_1081221 114Ga0316038_1066441 115Ga0316036_1185312 116Ga0307479_119823671 117Ga0335080_101366871 118Ga0335083_112819551 119Ga0326728_103359152 120Ga0334815_006648_2_154
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1Ga0006867J43190_1143082 2JGI25613J43889_101640591 3JGI26342J46808_10315731 4Ga0006843J48913_1087912 5Ga0006841J48915_1106602 6Ga0062385_102291872 7Ga0058897_110397561 8Ga0068968_14851421 9Ga0070733_108913141 10Ga0070733_109252331 11Ga0070766_105318721 12Ga0099830_100573581 13Ga0126381_1019429071 14Ga0126346_12562451 15Ga0138556_1653212 16Ga0138565_10519591 17Ga0138564_10909962 18Ga0150983_124652972 19Ga0137407_118694171 20Ga0182015_103078091 21Ga0187766_105542152 22Ga0242663_11169582 23Ga0209579_106318231 24Ga0311337_109455502 25Ga0310039_100661071 26Ga0307482_12254941 27Ga0335080_101366871 28Ga0334815_006648_2_154
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0242651_10114231 2Ga0068930_13994712 3Ga0062388_1021088781 4Ga0070733_108913141 5Ga0070733_109252331 6Ga0070732_105112941 7Ga0070766_105318721 8Ga0075018_100832341 9Ga0099792_112747172 10Ga0099796_102699642 11Ga0126381_1019429071 12Ga0126346_12562451 13Ga0138531_1642042 14Ga0138594_11379861 15Ga0150983_124652972 16Ga0182015_103078091 17Ga0187766_105542152 18Ga0137408_10819642 19Ga0210403_106992961 20Ga0210405_100554863 21Ga0210405_106495581 22Ga0210402_104791191 23Ga0242663_10144041 24Ga0242669_11039691 25Ga0242653_10314272 26Ga0209905_10817853 27Ga0209579_106318231 28Ga0311337_109455502 29Ga0316363_100617031 30Ga0316036_1185312 31Ga0307479_119823671 32Ga0335080_101366871 33Ga0326728_103359152 34Ga0334815_006648_2_154
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.02% β-sheet: 0.00% Coil/Unstructured: 56.98%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13533	Biotin_lipoyl_2	1.67
PF13620	CarboxypepD_reg	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.50 %
Unclassified	root	N/A	17.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.50 %
Unclassified	root	N/A	17.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.50 %
Unclassified	root	N/A	17.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	15.83 %
Unclassified	root	N/A	17.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	65.00 %
Unclassified	root	N/A	17.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	30.00 %
Unclassified	root	N/A	17.50 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	35.00 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	15.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28.33 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	35.00 %
Unclassified	root	N/A	17.50 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	35.00 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.50 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1.67 %
Unclassified	root	N/A	17.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	15.83 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002874\|Ga0006867J43190_114308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	565	Open in IMG/M
3300003219\|JGI26341J46601_10225739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300003220\|JGI26342J46808_1031573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	532	Open in IMG/M
3300003293\|Ga0006843J48913_108791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300003295\|Ga0006866J48919_114229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574	Open in IMG/M
3300003298\|Ga0006841J48915_110660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	678	Open in IMG/M
3300004080\|Ga0062385_10229187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1022	Open in IMG/M
3300004121\|Ga0058882_1007479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300004139\|Ga0058897_11039756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	564	Open in IMG/M
3300004473\|Ga0068919_1403806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1469	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.17%
Terrestrial	Environmental → Terrestrial	95.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	3.33%
Peat	Environmental → Terrestrial → Peat	2.50%
Sediment	Environmental → Aquatic → Sediment	0.83%
Soil	Environmental → Terrestrial → Soil	93.33%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.33%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.33%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	42.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.33%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002874	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 68 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003293	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003298	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 108 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0006867J43190_1143082	3300002874	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVF
JGI25613J43889_101640591	3300002907	Grasslands Soil	MIRKLGFLMLMGLALPAWSASSPGTISGYVRSAGGTPQMGAAVE
JGI26341J46601_102257391	3300003219	Bog Forest Soil	MLRKLGFSVLLLGLALPVWSADRPGTISGYVRAGSGVPQMGAMVEVLGAAAHSLKVFT
JGI26342J46808_10315731	3300003220	Bog Forest Soil	LILRKLGFSVLMLGLTLPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDENGFYNAA
Ga0006843J48913_1087912	3300003293	Peatlands Soil	VKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASDIPQMGAVVEVLGAAAETLKVFTDEN
Ga0006866J48919_1142292	3300003295	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENG
Ga0006841J48915_1106602	3300003298	Peatlands Soil	LLILRKLGFSMLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVE
Ga0062385_102291872	3300004080	Bog Forest Soil	VILRKLGFSLLMLGLTLPAWSVDRPGTISGYVRAAGGSPQMGAAVEV
Ga0058882_10074792	3300004121	Forest Soil	VILRKLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDER
Ga0058897_110397561	3300004139	Forest Soil	LLILRKLGFSLLLLGLALPAWSVDSPGTISGYVRAASGNPQMGAMVEVLGAAAHSLKV
Ga0068919_14038061	3300004473	Peatlands Soil	LLILRKLGFSMLMLGLALPVWSADRAGTISGCVRGAAGIPQMGAMVE
Ga0068968_14810262	3300004474	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENGFY
Ga0068968_14851421	3300004474	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYSAAGLLPASSGRKRST*
Ga0068971_15099811	3300004477	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDE
Ga0068984_11015612	3300004499	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAQSLKVFTDE
Ga0068940_11747621	3300004560	Peatlands Soil	LLILRKLGFSVLLLGLALPVWSADRRATISGFVRGATGIPQMGATVEVLGAAANSLRVF
Ga0068975_12380972	3300004598	Peatlands Soil	LLILRKLGFSMLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAQS
Ga0068964_12597742	3300004600	Peatlands Soil	VKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAVVEVLGAAAETLKYSLTRT
Ga0068918_12650041	3300004603	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYSA
Ga0068925_13385621	3300004611	Peatlands Soil	LILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEV
Ga0068930_13994712	3300004616	Peatlands Soil	VKLRKLGFSVLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTD
Ga0068963_13985561	3300004618	Peatlands Soil	LLILRKLGFSVLLLGLALPVWSADRRATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYSAA
Ga0062388_1021088781	3300004635	Bog Forest Soil	MLRKLGFSVLMLGLAFPAWSADRPGMISGYVRGASGMPQMGAVVEVL
Ga0072321_11847742	3300004965	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFT
Ga0072321_11848981	3300004965	Peatlands Soil	VKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAVVEVLGAAAETLKVFTD
Ga0072328_11803192	3300004966	Peatlands Soil	LLILRKLGFSMLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENG
Ga0072327_12762702	3300004969	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENGFYSAAGLLP
Ga0070733_108913141	3300005541	Surface Soil	LLILRKLGFSILLLCLALPASAENSSKISGYVRGASGTPQMGAVVEILGAAAQSLKVFTD
Ga0070733_109252331	3300005541	Surface Soil	LLILRKLGLSLLLLSLALPAWADNLGKISGYVRGSSGTPQMGAVV
Ga0070732_105112941	3300005542	Surface Soil	LLILRKLGFSVLMLGLALPVWSADKPGTISGYVRAAGGIPQMGATVEVLGVAAHG
Ga0070766_103584882	3300005921	Soil	VILRKLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAA
Ga0070766_105318721	3300005921	Soil	LQILRKLGFSILMLGLVLPAWSVEKPGTISGCVRGANGIPQMGAMVEVLSTAAISFRVFTDENGFYSAAGL
Ga0075018_100832341	3300006172	Watersheds	LLILRRLGFSVLMLGLALPVWSADRPGTISGYVRAASGVPQMGAVVEVLG
Ga0063829_14568581	3300006860	Peatlands Soil	LILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVE
Ga0099830_100573581	3300009088	Vadose Zone Soil	MGLALPAWSAAGPGTISGYVRNAGGVPQMGAVVEVLGS
Ga0099827_101351361	3300009090	Vadose Zone Soil	MFRKLGFLMVVMGLALPAWSAAGPGTISGYVRNAGGVPQMGAVVEVLG
Ga0099792_112747172	3300009143	Vadose Zone Soil	MFRKLGFLMAVMGLALPGWSAATPGTISGYVRSAGGTPQMGAAVELLGSVV
Ga0116224_104734321	3300009683	Peatlands Soil	LLILRKLGFSVVLLGLAIPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYSAAGL
Ga0099796_102699642	3300010159	Vadose Zone Soil	MYRKLGFLMVLMGLALPAWSAVTPGTISGFVRSAGGTPQMGAAVELLGSA
Ga0126381_1019429071	3300010376	Tropical Forest Soil	MFRKLSCLVAVFGLMLPLATAADKPGTISGFVRDGGGVPQIGAMVEVLGAAARELKVFTD
Ga0126346_12562451	3300010865	Boreal Forest Soil	MLRKLGFLLLLPGLVLPVWSADRPGTISGYVRGATGIPQMGAMVEVLGAAAQSFKVFTDENGFYAAAGLLPG
Ga0138553_1587611	3300011047	Peatlands Soil	LLILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVLGA
Ga0138556_1653212	3300011048	Peatlands Soil	LLILRKLGFSVLLLALALPVWSADRRATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDED
Ga0138571_1311452	3300011050	Peatlands Soil	LVKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAVVEVLGAAAETLKYSLTRT
Ga0138531_1642042	3300011053	Peatlands Soil	LVKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAVVEVLGAAAETLKVFT
Ga0138597_10363821	3300011059	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENGFYSAAGLLPG
Ga0138582_10888511	3300011062	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHS
Ga0138537_10276832	3300011063	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDE
Ga0138537_10423651	3300011063	Peatlands Soil	VKLRKLGFSVLMLGLALPVWSADRPGKISGYVRGASGIPQMGAM
Ga0138524_10600801	3300011066	Peatlands Soil	MLMLGLALPVWSADRPGKISGYVRGASGIPQMGAMVEVLGAAAQSLK
Ga0138594_11379861	3300011067	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYS
Ga0138599_11120071	3300011068	Peatlands Soil	VKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAV
Ga0138595_10134522	3300011071	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLG
Ga0138584_10690842	3300011073	Peatlands Soil	LILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVL
Ga0138559_10009871	3300011074	Peatlands Soil	MLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVLGAAAQSLKVFTDE
Ga0138559_10913052	3300011074	Peatlands Soil	LLILRKLGFSVLLLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSL
Ga0138555_10611082	3300011075	Peatlands Soil	LLILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVL
Ga0138555_11667721	3300011075	Peatlands Soil	LLILRKLGFSVLMLGLALPVWSADRPGKISGYVRGASGIPQMCAMVEVL
Ga0138572_11004211	3300011077	Peatlands Soil	VKLRKLGFSVLMLGLALPGWSADKPGTISGYVRGASGIPQMGAVVEVLGAAAETLKVFTDEN
Ga0138565_10519591	3300011078	Peatlands Soil	VILRKLGFSVLTLGLALPVWSADRTGKVSGYVRGDSRIPQMA
Ga0138565_11482462	3300011078	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAAN
Ga0138560_11875722	3300011083	Peatlands Soil	LLILRKLGFSMLMLGLALPVWSADNPGTISGYVRAATGSPQMG
Ga0138562_10640492	3300011084	Peatlands Soil	MLMLGLALPVWSADNPGTISGYVRGGSGIPQMGAMVEVLGAAAHSLKVFTDENGFYSAA
Ga0138581_12138371	3300011085	Peatlands Soil	LLILRKLGFSVLLLGLALPGWSADKQATISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDG
Ga0138564_10909962	3300011086	Peatlands Soil	MLHKLGFLVGMLGLALSLSAADRPGTISGYVRSASGVPQMG
Ga0138570_10257741	3300011087	Peatlands Soil	LLILRKLGFSVLLLGLALPVWSADKQAKISGFVRGATGIPQMGATVEVLGAAANSLRVFTDED
Ga0138573_10946661	3300011089	Peatlands Soil	LLILRKLGFSVLMLGLALPVWSADRPGTISGCVRGATGIPQMGAMVEVLGAAAQDFKVFTDENG
Ga0150983_124652972	3300011120	Forest Soil	LLILRKLGFSLLMLGLALPVWSADKPGAISGFVRGGGGIPQMGAMVEVLGVAANDLRVFTDQDGFYSA
Ga0138532_10608551	3300011305	Peatlands Soil	LLILRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEV
Ga0137407_118694171	3300012930	Vadose Zone Soil	MFRKLGFLMVVMGLALPAWSAAGPGTISGYVRNAGGVPQMGAIVEVLGSAVLSSKVFTDDHGFYTIAGLL
Ga0182015_103078091	3300014495	Palsa	LLILRKLGFSLLLFGLTLSAWAENSGKISGYVRGNSGAPQMGAVVEILG
Ga0187766_105542152	3300018058	Tropical Peatland	MGMFRKLGFLGMILGLALPAFCADGGTISGYVRNAGGVPQMGAVVELLRSTAQTLTVFTD
Ga0184597_1071012	3300019162	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGL
Ga0184589_1206341	3300019165	Soil	VILRKLGFSLLMLGLTLPAWSVDRPGTISGYVRAAGGSPQMGAAVEVL
Ga0184595_1200582	3300019166	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDERGFYSAEG
Ga0184598_1013681	3300019182	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAV
Ga0184598_1377681	3300019182	Soil	LLILRKLGFSVLLLGLALPVWSADKQAKISGFVRGATGIPQMGATVEVLGAAANSLRVFTDQDGFYSAAGLLPGVY
Ga0184586_1186661	3300019194	Soil	VILRKLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTD
Ga0137408_10819642	3300019789	Vadose Zone Soil	MFRKLGFLMVVMGLALPAWSAAGPGTISGYVRNAGGVPQMGAIVEVLGSAVLSSKVFTDDHGFYTIAG
Ga0210403_106992961	3300020580	Soil	LLILRKLGFSVLLLGLALPGWSAERPATISGYVRAASGIPQMGAMVEVLGAAAHSLKVFTDENGFYSAAGLLPGV
Ga0210399_106823201	3300020581	Soil	LLILRKLGFSVLLLGLALPGWSAERPATISGYVRAASGIPQMGAMVEVLGAAAHSLKVFTDENGFYSAAGL
Ga0210400_101337461	3300021170	Soil	LLILRKLGFSILLLGLALPAWADNSGKISGYVRGVSGTPQMGAVVEILGAAAQSL
Ga0210405_100554863	3300021171	Soil	LLILRKLGFSVLMLGLALPVWSADRPGTISGCVRGAGGIPQMGAMVEVLGAAAQDLRVFTDENGYYAAAGL
Ga0210405_106495581	3300021171	Soil	LLILRKLGFSILLFGLALPAWAENSGKISGHVRGASGTPQMGAVVEILGAAAQTLKVFT
Ga0210405_109825142	3300021171	Soil	VILRKLGFSLLMLGLALPAWSADRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDEHGFYSAEG
Ga0210389_102317532	3300021404	Soil	VILRKLGFSLLMLGLALPAWSADRPGTISGYVRAAGGSPQMGAA
Ga0210402_104791191	3300021478	Soil	MLRKLGLSVLLLGLALPAWSADKPSTISGFVRGASGIPQMGAMVEVLGAAAHGLIVFTD
Ga0210409_101656712	3300021559	Soil	VILRKLGFSMLLLGLALPVWSADKQAKISGFVRGATGIPQMGATVEVLGAAANSLR
Ga0222728_10435452	3300022508	Soil	VILRRLGFSLLMLGLALPAWSADRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTD
Ga0242651_10114231	3300022511	Soil	LLILRKLGFSILMLGLALPVWSADRPGTISGYVRGATGIPQMGAMVEVLGAAAHSLKV
Ga0242663_10144041	3300022523	Soil	VLILRKLGFSLLLLGLALPAWSVDSPGTISGYVRAASGNPQMGAMVEVLGAAAHSLKVFTDENGFYSAAGLLP
Ga0242663_11169582	3300022523	Soil	LLMLGLALPAWSADRPGTISGYVRAAGGSPQMGAAVAVLGAAA
Ga0242669_11039691	3300022528	Soil	LLKLRKLGFSLLLLGLALPSWSTDRPGTISGYVRGASGIPQMGAVVEVLGAAA
Ga0242670_10762881	3300022708	Soil	LLILRKLGFSVLLLGLALPVWSADKQAKISGFVRGATGIPQMGATVELLGAAANSLRVFTDEDAFYSAAGLLPGVYSI
Ga0242653_10314272	3300022712	Soil	LLKLRKLGFSLLMLGLALPAWSADNPGTISGYVRGGTGIPQMGAVVE
Ga0242678_10294132	3300022715	Soil	VILRRLGFSLLMLGLALPAWSADRPGTISGYVRAAGGSPQMGAAVEVLGAA
Ga0242654_100267381	3300022726	Soil	LLKLRKLGFSLLLLGLALPSWSTNRPGTISGYVRGASGIPQMGAVVEV
Ga0247537_1034172	3300023533	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDER
Ga0247547_1009822	3300023656	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAA
Ga0209421_11187632	3300027432	Forest Soil	VILRKLGFSVLMLGLALPVWSADRPGKISGYVRGASGIPQMGAVVEVLGAAAQSLKVF
Ga0209219_11491801	3300027565	Forest Soil	LLILRKLGFSILLLGLALPAWAENSGKISGHVRGASGTPQMGAVVEILGA
Ga0209905_10817853	3300027634	Thawing Permafrost	LLILRKLGFAVLMLGLALPLWSADRPGTISGFVRAAGGVPQMGAMVEVLGAAAHSLK
Ga0209333_10719591	3300027676	Forest Soil	LILRKLGFSMLMLGLTLPAWSADRPGTISGYVRAAGGSPQMGAAVEVLGAAAQG
Ga0209579_106318231	3300027869	Surface Soil	MFQKLGFLALLIALAVPAVAADKPGSISGYVRNVGGIPQMGAMVEVLGAAARDLKVFTDERGFYD
Ga0222749_105175031	3300029636	Soil	LLILRKLGFSLLLLGLALPAWSVDSPGTISGYVRAASGNPQMGAMVEVLGAAAHSLQVFTDEN
Ga0311337_109455502	3300030000	Fen	MFRKLGFLMLVMGLALPAWSTDTPGTISGYVRNAGGVPQMGAAVELLGTAILSP
Ga0210288_10878421	3300030575	Soil	VILRKLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDERGFYSAEG
Ga0316363_100617031	3300030659	Peatlands Soil	MLRKLGFSVLMLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVLGAAALSL
Ga0310039_100661071	3300030706	Peatlands Soil	MLVLALPAWSADRPGTISGYVRAATGSPQMGAMVEVLGAAAQSLKVFTDEKGFY
Ga0307482_12254941	3300030730	Hardwood Forest Soil	MLRKLGFSMLLLGLALPLWSADTPGTISGYVRGASGIPQMGAVVEVLGAAA
Ga0265745_10083672	3300030759	Soil	LLILRKLGFSVLLLGLALPVWSADKQAKISGFVRGATGIPQMGATVEVLGAAANSLRVFTDEDGFYS
Ga0265742_10093691	3300030874	Soil	VILRKLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQG
Ga0316049_1081221	3300031866	Soil	MLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAA
Ga0316038_1066441	3300031868	Soil	VILRRLGFSLLMLGLTLPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDERGFYS
Ga0316036_1185312	3300031871	Soil	VILRRLGFSLLMLGLALPAWSVDRPGTISGYVRAAGGSPQMGAAVEVLGAAAQGLKVFTDERGFYSAEGLLP
Ga0307479_119823671	3300031962	Hardwood Forest Soil	LRILRKLGFSVLLLGLALPVWSADSPGTISGYVRGASGIPQMGAMVEVLGAAAQSLKVFTDEN
Ga0335080_101366871	3300032828	Soil	MIRKLGFLVAVMSLALPAWSAPDPGAISGYVRNASGVPQMGAAVEVLGSAILSTRVFT
Ga0335083_112819551	3300032954	Soil	MIRKLGFLVAVMSLALPAWSAPDPGAISGYVRNASGVPQMGAAVEVLGSAILS
Ga0326728_103359152	3300033402	Peat Soil	LLVLRKLGFAVLMLGAALPLCSAERPGTISGYVRAADGVPQMGAMVEVLGAAAHSLKVFTDENGFY
Ga0334815_006648_2_154	3300033797	Soil	MFRKLGFLVAVMSLSLPAWSADGPGTISGYVRNGSGSPQMGAAVEVLGSAV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences