Metagenome / Metatranscriptome Family F073981

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073981
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	48 residues
Representative Sequence	MSQAQTFYEGHSFYEGLTWWFVRERIGQGLRERYQVPKELPAKLLA
Number of Associated Samples	62
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.05 %
% of genes near scaffold ends (potentially truncated)	92.50 %
% of genes from short scaffolds (< 2000 bps)	92.50 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.167 % of family members)
Environment Ontology (ENVO)	Unclassified (75.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03330	DPBB_1	3.33
PF01738	DLH	1.67
PF09939	DUF2171	0.83
PF00884	Sulfatase	0.83
PF02796	HTH_7	0.83
PF00034	Cytochrom_C	0.83
PF04828	GFA	0.83
PF00480	ROK	0.83
PF03992	ABM	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.67
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
All Organisms	root	All Organisms	17.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
cellular organisms	root	All Organisms → cellular organisms	17.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	4.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.50 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	4.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02QVCNE	Not Available	512	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1015601	Not Available	1445	Open in IMG/M
3300005332\|Ga0066388_102865498	Not Available	881	Open in IMG/M
3300005332\|Ga0066388_104599184	Not Available	702	Open in IMG/M
3300005332\|Ga0066388_105524306	Not Available	640	Open in IMG/M
3300005332\|Ga0066388_108610146	Not Available	507	Open in IMG/M
3300005363\|Ga0008090_14358756	Not Available	623	Open in IMG/M
3300005560\|Ga0066670_10365221	Not Available	881	Open in IMG/M
3300005764\|Ga0066903_101957255	Not Available	1124	Open in IMG/M
3300005764\|Ga0066903_102960135	Not Available	920	Open in IMG/M
3300005764\|Ga0066903_105231184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	686	Open in IMG/M
3300005764\|Ga0066903_105402536	Not Available	674	Open in IMG/M
3300005764\|Ga0066903_106509781	Not Available	609	Open in IMG/M
3300005764\|Ga0066903_106551331	Not Available	606	Open in IMG/M
3300006172\|Ga0075018_10145557	Not Available	1089	Open in IMG/M
3300006175\|Ga0070712_100635339	Not Available	906	Open in IMG/M
3300010358\|Ga0126370_10405363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1122	Open in IMG/M
3300010360\|Ga0126372_11229711	Not Available	774	Open in IMG/M
3300010361\|Ga0126378_10197407	Not Available	2087	Open in IMG/M
3300010361\|Ga0126378_10400986	All Organisms → cellular organisms → Bacteria → Acidobacteria	1484	Open in IMG/M
3300010376\|Ga0126381_103705328	Not Available	598	Open in IMG/M
3300010376\|Ga0126381_104046383	Not Available	570	Open in IMG/M
3300016270\|Ga0182036_10362699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1120	Open in IMG/M
3300016270\|Ga0182036_10975942	Not Available	697	Open in IMG/M
3300016294\|Ga0182041_10166779	Not Available	1718	Open in IMG/M
3300016294\|Ga0182041_11735380	Not Available	578	Open in IMG/M
3300016319\|Ga0182033_10862512	Not Available	800	Open in IMG/M
3300016319\|Ga0182033_10922000	Not Available	774	Open in IMG/M
3300016319\|Ga0182033_11402006	Not Available	629	Open in IMG/M
3300016319\|Ga0182033_11764640	Not Available	561	Open in IMG/M
3300016341\|Ga0182035_10401983	Not Available	1151	Open in IMG/M
3300016341\|Ga0182035_10901242	Not Available	780	Open in IMG/M
3300016371\|Ga0182034_10678828	Not Available	874	Open in IMG/M
3300016371\|Ga0182034_11945147	Not Available	519	Open in IMG/M
3300016387\|Ga0182040_10177049	Not Available	1547	Open in IMG/M
3300016387\|Ga0182040_10461316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1009	Open in IMG/M
3300016387\|Ga0182040_10804607	Not Available	775	Open in IMG/M
3300016387\|Ga0182040_11252385	Not Available	625	Open in IMG/M
3300016404\|Ga0182037_10676418	Not Available	882	Open in IMG/M
3300016404\|Ga0182037_11257216	Not Available	652	Open in IMG/M
3300016422\|Ga0182039_11072644	Not Available	724	Open in IMG/M
3300016422\|Ga0182039_11727996	Not Available	573	Open in IMG/M
3300016422\|Ga0182039_11901595	Not Available	546	Open in IMG/M
3300016445\|Ga0182038_11447769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	616	Open in IMG/M
3300016445\|Ga0182038_11477255	Not Available	610	Open in IMG/M
3300021560\|Ga0126371_10350034	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300021560\|Ga0126371_10713510	Not Available	1151	Open in IMG/M
3300021560\|Ga0126371_11450648	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300021560\|Ga0126371_12343103	Not Available	645	Open in IMG/M
3300025928\|Ga0207700_11914585	Not Available	519	Open in IMG/M
3300025929\|Ga0207664_11221097	Not Available	670	Open in IMG/M
3300027090\|Ga0208604_1011185	Not Available	853	Open in IMG/M
3300031546\|Ga0318538_10738539	Not Available	534	Open in IMG/M
3300031572\|Ga0318515_10576903	Not Available	598	Open in IMG/M
3300031573\|Ga0310915_10516923	Not Available	848	Open in IMG/M
3300031573\|Ga0310915_10722766	Not Available	702	Open in IMG/M
3300031680\|Ga0318574_10736304	Not Available	578	Open in IMG/M
3300031682\|Ga0318560_10313464	Not Available	846	Open in IMG/M
3300031719\|Ga0306917_10457872	Not Available	999	Open in IMG/M
3300031724\|Ga0318500_10728037	Not Available	507	Open in IMG/M
3300031744\|Ga0306918_10042636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2961	Open in IMG/M
3300031768\|Ga0318509_10437190	Not Available	732	Open in IMG/M
3300031781\|Ga0318547_10376159	Not Available	870	Open in IMG/M
3300031782\|Ga0318552_10219927	Not Available	963	Open in IMG/M
3300031819\|Ga0318568_10755733	Not Available	604	Open in IMG/M
3300031833\|Ga0310917_10572683	Not Available	767	Open in IMG/M
3300031846\|Ga0318512_10064106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300031879\|Ga0306919_11241193	Not Available	565	Open in IMG/M
3300031890\|Ga0306925_10341173	Not Available	1609	Open in IMG/M
3300031890\|Ga0306925_10501623	Not Available	1292	Open in IMG/M
3300031890\|Ga0306925_11142632	Not Available	784	Open in IMG/M
3300031894\|Ga0318522_10371922	Not Available	541	Open in IMG/M
3300031897\|Ga0318520_10250621	Not Available	1057	Open in IMG/M
3300031910\|Ga0306923_10476614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1413	Open in IMG/M
3300031910\|Ga0306923_10646148	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300031910\|Ga0306923_11752591	Not Available	640	Open in IMG/M
3300031912\|Ga0306921_10551467	Not Available	1337	Open in IMG/M
3300031912\|Ga0306921_11102132	Not Available	890	Open in IMG/M
3300031912\|Ga0306921_11676931	Not Available	688	Open in IMG/M
3300031941\|Ga0310912_10161798	All Organisms → cellular organisms → Bacteria → Proteobacteria	1695	Open in IMG/M
3300031945\|Ga0310913_10491746	Not Available	871	Open in IMG/M
3300031945\|Ga0310913_10754772	Not Available	687	Open in IMG/M
3300031945\|Ga0310913_10848176	Not Available	643	Open in IMG/M
3300031945\|Ga0310913_11117727	Not Available	550	Open in IMG/M
3300031946\|Ga0310910_10927218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	682	Open in IMG/M
3300031946\|Ga0310910_10981216	Not Available	661	Open in IMG/M
3300031946\|Ga0310910_11247779	Not Available	575	Open in IMG/M
3300031947\|Ga0310909_10039693	Not Available	3552	Open in IMG/M
3300031954\|Ga0306926_10599006	Not Available	1346	Open in IMG/M
3300031954\|Ga0306926_12222008	Not Available	610	Open in IMG/M
3300031954\|Ga0306926_12485539	Not Available	568	Open in IMG/M
3300032001\|Ga0306922_10054624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4140	Open in IMG/M
3300032001\|Ga0306922_10227563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	2003	Open in IMG/M
3300032001\|Ga0306922_10234797	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300032001\|Ga0306922_11210225	Not Available	768	Open in IMG/M
3300032035\|Ga0310911_10617457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300032035\|Ga0310911_10935496	Not Available	500	Open in IMG/M
3300032059\|Ga0318533_10178949	Not Available	1511	Open in IMG/M
3300032059\|Ga0318533_10673458	Not Available	759	Open in IMG/M
3300032059\|Ga0318533_11066880	Not Available	592	Open in IMG/M
3300032060\|Ga0318505_10116640	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300032063\|Ga0318504_10564213	Not Available	546	Open in IMG/M
3300032064\|Ga0318510_10481096	Not Available	536	Open in IMG/M
3300032065\|Ga0318513_10313339	Not Available	763	Open in IMG/M
3300032076\|Ga0306924_10303690	Not Available	1832	Open in IMG/M
3300032076\|Ga0306924_11181402	Not Available	829	Open in IMG/M
3300032076\|Ga0306924_11406012	Not Available	744	Open in IMG/M
3300032076\|Ga0306924_11628274	Not Available	679	Open in IMG/M
3300032094\|Ga0318540_10244659	Not Available	866	Open in IMG/M
3300032094\|Ga0318540_10613157	Not Available	524	Open in IMG/M
3300032261\|Ga0306920_100249639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2647	Open in IMG/M
3300032261\|Ga0306920_101680069	Not Available	900	Open in IMG/M
3300032261\|Ga0306920_103422867	Not Available	588	Open in IMG/M
3300032261\|Ga0306920_103856273	Not Available	547	Open in IMG/M
3300033289\|Ga0310914_10438462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1182	Open in IMG/M
3300033290\|Ga0318519_10431203	Not Available	788	Open in IMG/M
3300033290\|Ga0318519_11035522	Not Available	510	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.17%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.17%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	11.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02406410	2070309004	Green-Waste Compost	MSQAKTFYEAHPFYGGLTWSFVTEQIGQGLRDHYEVPKELPLKLLALVRKLGAIESKSPCTRT
AF_2010_repII_A100DRAFT_10156015	3300000655	Forest Soil	MGASVTQAQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPKELPPKLQTL
Ga0066388_1028654983	3300005332	Tropical Forest Soil	MSQAQSFYEGHSFYGRLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSP
Ga0066388_1045991841	3300005332	Tropical Forest Soil	MSLAQSFYEDHYLYEGLTWWSVREQIGQGLRERYQIPKELPPKLVWLVRKLD
Ga0066388_1055243062	3300005332	Tropical Forest Soil	MSQAQTFYEDHFLYEGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSP
Ga0066388_1086101461	3300005332	Tropical Forest Soil	MSQAETFYEGHSFYEGLTWSFVREQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSPAR
Ga0008090_143587561	3300005363	Tropical Rainforest Soil	MSQGETFYEGHSFYEGLTWSSVREQIGQGLRERYQVPKELPPNS
Ga0066670_103652211	3300005560	Soil	MSQAQSFYEGHSFYEGLTWSFVRERIGQGLRERYRVPKELPPNLQMLVLSVTQSKGTVC*
Ga0066903_1019572553	3300005764	Tropical Forest Soil	MSQAQTFYEDHYLYEGPTWSSVRELIGHGLRERYQVPKELP
Ga0066903_1029601351	3300005764	Tropical Forest Soil	MSAAQALYEDHYLYEGLTWSSVRELIGQGLREGYQVPTELSAKLLALIRKLEAI
Ga0066903_1052311842	3300005764	Tropical Forest Soil	MSQAETFYEGHSIYGGLTWSSVRELIGQGLRERYK
Ga0066903_1054025362	3300005764	Tropical Forest Soil	MSQAETFYEGHSFYEGLTWSSVRELIGQGLKERYQVPKELHPNCSHWSGS*
Ga0066903_1065097813	3300005764	Tropical Forest Soil	MADAQTFCEGHSFYERHKALTWWFVMARFGDDLRERYRVPKELPLKLAWLVRKLDDDRDWLFP
Ga0066903_1065513311	3300005764	Tropical Forest Soil	MSQALTFYEDHYLYEGLTWWSVRERIGQGLRERYQVPTELPAKLLA
Ga0075018_101455571	3300006172	Watersheds	MPQAHSFYEGHSFYEGLTWWFVRERIGHGLRERYQVHKELPSELLKLVMT
Ga0070712_1006353391	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDMPQQHSFYEGHSFYEGLTWWFIRERIGHCLRERYE
Ga0126370_104053631	3300010358	Tropical Forest Soil	MSQAQTFYEAHPLYGGLTWSFVTKQIGQGLRDHYEVPKELPLKLLALVRKLQAIETAPAR
Ga0126372_112297111	3300010360	Tropical Forest Soil	MSQGETFYEGHSFYEGLTWSFIREQIGEALRERYQVPKELPPKLLAL
Ga0126378_101974073	3300010361	Tropical Forest Soil	MGASVTQAQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPKELPPKLQ
Ga0126378_104009861	3300010361	Tropical Forest Soil	MSQAETFYEGHSIYGGLTWSSVRELIGQGLRERYKVPDEL
Ga0126381_1037053281	3300010376	Tropical Forest Soil	MSQAQTFYEDHFLYEGLTWSFVKEQIGQGLREVYELPTE
Ga0126381_1040463831	3300010376	Tropical Forest Soil	MSQAETFYEGHSFYEASLGRLSGNSLAKVRERYQVPKELSPKLLALVRKLDTVECKSS
Ga0182036_103626991	3300016270	Soil	MSQAQPFYEGHSFYGGLTWSFLKEQIGQGLRERYELPTELSSK
Ga0182036_109759421	3300016270	Soil	VVPGMLQAQTFYEVHSFYESHKALTWWFIMARIGQGLRERYQSPKDLPPKLL
Ga0182041_101667791	3300016294	Soil	MSQAQTFYEDHYLYKGLTWWFVREQIGLGLRERYQVPNKLPAELLALVTKL
Ga0182041_117353801	3300016294	Soil	MSQRQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPT
Ga0182041_119016341	3300016294	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQ
Ga0182033_108625121	3300016319	Soil	MSQVETFYEGHSFYEGLTWSFVREQIGQGLRQRYELPT
Ga0182033_109220001	3300016319	Soil	MSQAQTFYETHSFYEGLTWSFVREQIGQGLRERYQLPTELPAKLLALLRKLEAIESKSLRGRSVIG
Ga0182033_114020062	3300016319	Soil	MSQAQPFYEGHSLYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSPARTLT
Ga0182033_117646401	3300016319	Soil	MSQVQSFYEGHSFYEGLTWWFVRERIGQGLRERYQV
Ga0182035_104019831	3300016341	Soil	MSQAETFYEGHSFYEGLTWSFVREQIGQGLRQRYELP
Ga0182035_109012421	3300016341	Soil	MSQAQTFYEGHSFYEGLTWSFVREQIGQGLRQRYELPTELPSKLLA
Ga0182034_106788282	3300016371	Soil	VVPGMSQAQTFYEGHSFYERHKALTWWFIMARIGQGLRERYQSPKDLPPKLLGLVRN
Ga0182034_119451472	3300016371	Soil	MSQAQTFYEDHYLYKGLTWWFVREQIGLGLRERYQVPNKLPAEL
Ga0182040_101770491	3300016387	Soil	MSQAETFYEGHSLYGGLTWSSVRELIGQGLRERYQVPNELPAKLLA
Ga0182040_104613161	3300016387	Soil	MSQAEPFYEGHSFYGGLTRSFVKEQIGQCLRERYELPTELSSKLLALIRKLEAAENKSSPAR
Ga0182040_108046071	3300016387	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSSKLLA
Ga0182040_112523852	3300016387	Soil	MSQAQTFYEDHYLYEEITWSFVRERIGQGLGERYQVPKELPAKLLALIK
Ga0182037_106764181	3300016404	Soil	MSQAQTFYEGHSFYGGLTWSFVKEQIGQGLRERYELPTELSSKLLAL
Ga0182037_112572161	3300016404	Soil	MSQAEPFYEGHSFYGGLNWSFVKEQIGQGLRERYELPTELSSKLLALIRKLE
Ga0182039_100832594	3300016422	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVSTEL
Ga0182039_110726442	3300016422	Soil	MSQAQSFYDGHSFVQGLIWWFVMGRIGQGLRERYEVPKELPPKLLALVRNLDDSD
Ga0182039_117279961	3300016422	Soil	MSQAQTFYEDHYLYEGLTWSSVRELIGHGLRERYQVPKELPAKLLALIKK
Ga0182039_119015951	3300016422	Soil	MPQAQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPK
Ga0182038_101812475	3300016445	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVPNE
Ga0182038_114477691	3300016445	Soil	MSQAQTFYEGHSFYEGLTWWFVRERIGQGLRERYQVPKELPAKLLA
Ga0182038_114772551	3300016445	Soil	MSQAETFYEGRSLYGGLTWSSVRELIGQGLRERYQVPNELPAKLLA
Ga0126371_103500344	3300021560	Tropical Forest Soil	MPQAQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVP
Ga0126371_107135101	3300021560	Tropical Forest Soil	MSQAETFYEAGLTWSFVTEQIGQGLREHYQGPKELPRKLLALIKKLEAIESK
Ga0126371_114506481	3300021560	Tropical Forest Soil	MSQAETFYEGHSLYEGLTWSSVRELIGRGLRERYQVPNELPTKLLALIRKL
Ga0126371_123431033	3300021560	Tropical Forest Soil	MSQAETFYEGHSFYEGLSWSFVRELIGQGLRERYQVPNE
Ga0207700_119145851	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPQAHSFYEGHSFYEGLTWWFVRERIGHGLRESYRVPEELPPKLLA
Ga0207664_112210971	3300025929	Agricultural Soil	MSQAQTFYEAHPFYGGLTWSFVREQIGQGLSEYYRIPKELPPKL
Ga0208604_10111851	3300027090	Forest Soil	VPSMPQAHSFYEGHSFYEGLTWWFVRERIGHGLRERYQVPEELPPKLLA
Ga0318538_107385391	3300031546	Soil	MSQRQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPKELPSKFLWL
Ga0318515_105769031	3300031572	Soil	MSQAETFYEGHSLYGGLTWSSVRELIGQGLRERYKVPDELPTKLL
Ga0310915_105169231	3300031573	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSPAH
Ga0310915_107227662	3300031573	Soil	MSQAETFYEGHSLYGGLTWSSVRELIGQGLRERYKVPDELPTKLLALIRKLEAI
Ga0318574_107363042	3300031680	Soil	VRAPDWGAHMSQAQTFYEGHSYEGLIWSFVREWIRHCLRARYQVPKELPAK
Ga0318560_103134641	3300031682	Soil	MSQRQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPTELPPELLTLVRKFDD
Ga0306917_104578722	3300031719	Soil	MSQAQPFYEGHSLYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAEN
Ga0318500_107280372	3300031724	Soil	MSQRQSFYEGHSFVQGLIWWFVMGRIGQGLREHYEVPKELPSKYL
Ga0306918_100426361	3300031744	Soil	MSQAETFYEGHSLYGGLTWLSVRELIGQGLRERYKVPDELPTKLLALIRK
Ga0318509_104371902	3300031768	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVPNELPAKLLALIRKLEAI
Ga0318547_103761591	3300031781	Soil	MSQVETFYEGHSFYEGLTWSFVREQIGQGLRQRYEL
Ga0318552_102199273	3300031782	Soil	MSQAETFCEGHSLYGGLTWASVSELIGQGLRERYQVPKELSPKLLALVRKLD
Ga0318568_107557332	3300031819	Soil	MSQAETFYEGHSFYEGLTWSSVRELIGQGLREHYQVPTH
Ga0310917_105726831	3300031833	Soil	MSQVQSFYEANSFYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAEN
Ga0318512_100641063	3300031846	Soil	MSQAETFYEGHSIYGGLTWSSVRELIGQGLRERYKVPDELPTKLLALI
Ga0306919_112411931	3300031879	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSSKLLALIRKLE
Ga0306925_103411732	3300031890	Soil	MSQVQSFYEGHSVYEGLTWSFVREQIGQGLRDRYEVSTELPAKLLALIRKLEAIENK
Ga0306925_105016231	3300031890	Soil	MSQAETFYEGHSFYEGLTWSFVREQIGQGLRQRYELPTELP
Ga0306925_111426321	3300031890	Soil	MSQVQSFYEGHSFYEGLTWWFVRERIGQGLRERYQIPNE
Ga0318522_103719222	3300031894	Soil	MSQAETFCEGHSLYGGLTWASVSELIGQGLRERYQVPKELSPKLLALVRK
Ga0318520_102506211	3300031897	Soil	MSQVQSFYEANSFYGGLTWSFVKEQIGQGLRERYELPTELSSKLL
Ga0306923_104766143	3300031910	Soil	MSQAEPFYEGHSFYGGLTRSFVKEQIGQCLRERYELPT
Ga0306923_106461481	3300031910	Soil	MSQVETFYEGHSFYEGLTWWFVREQIGQGLRQRYELPTEL
Ga0306923_117525911	3300031910	Soil	MSQVQSFYEGHSFHEGLTWWFVRERIGQGLRERYQVPKKLP
Ga0306921_105514675	3300031912	Soil	MSQAETFYEGHSFYEGLTWSFVRELIGQGLRERYQVPIELPSKLLALV
Ga0306921_111021321	3300031912	Soil	MSQAETFYEGHSLYGGLTWSSVRELIGQGLRERYRVPNELPAKLLALIRKLEAI
Ga0306921_116769311	3300031912	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSS
Ga0310912_101617982	3300031941	Soil	VVPGMSQAQTFYEGHSFYERHKALTWWFIMARISQGLRERYQSPKDLPPKLLGLVRN
Ga0310913_104917461	3300031945	Soil	MSQAQTFYEGHSFYEGLTWWFVRERIGQGLRERYQVPKELPA
Ga0310913_107547721	3300031945	Soil	MSEAQTFYEDHYLYEGLTWWSVRERIGQGLRERYRVPTELPVRL
Ga0310913_108481763	3300031945	Soil	MSQAQTFYEDHYLYKGLTWWFVREQIGLGLRERYQVPNKLPAELLALVTKLK
Ga0310913_111177271	3300031945	Soil	MSQAQTFYEGHSFYEGLTWWFVREQIGQGLRERYQVPKEVPAKLLALI
Ga0310910_109272182	3300031946	Soil	MSQAEPFYEGHSFYGGLTRSFVKEQIGQCLRERYELPTELSSKLLALIR
Ga0310910_109812161	3300031946	Soil	MPQAHSFYQRHSFSEGFTWWFVRKRIGQDLRERYDVPKGLP
Ga0310910_112477793	3300031946	Soil	MSQAETFYEGHSFYEGLTWSFVREQIGQGLRQRYELPTEL
Ga0310909_100396938	3300031947	Soil	MSQAETFYEGHSFYGGLTWSSVRELIGQGLRERYQVPNELPAKLLALIRKL
Ga0306926_105990064	3300031954	Soil	MSQAQTFYEGHSFYERHAALTWWFVMARIGQGLRERYQSPKDLPPK
Ga0306926_122220081	3300031954	Soil	MSQVQSFYEGHSVYEGLTWSFVREQIGQGLRERYESSTELPAKLLALIRKLEAI
Ga0306926_124855391	3300031954	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTE
Ga0306922_100546241	3300032001	Soil	MSQAQTFYEGHSFYERHKALTWWFIMARISQGLRERYQSPKDLPPKLLGLVRN
Ga0306922_102275633	3300032001	Soil	MSQAQPFYEGHSLYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEAAENKSSPARTLIGTVD
Ga0306922_102347975	3300032001	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSSKLLAL
Ga0306922_112102251	3300032001	Soil	MSQVVQSFYGGHSFYEGLTWWFVRERIGQGLRERYRVPKELPAKLLALI
Ga0310911_106174571	3300032035	Soil	MSQVQTFYEGHSFYEGLTWSFVRELIGQGLRKRYQVSTELPAKLLALLRKLE
Ga0310911_109354961	3300032035	Soil	MSQAQTFYEGHSFYGGLTWSFVKEQIGQGLRERYELPTELSSKL
Ga0318533_101789493	3300032059	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVSTELPAKLLALLRKLE
Ga0318533_106734582	3300032059	Soil	MSQVQSFYEANSFYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLE
Ga0318533_110668801	3300032059	Soil	MSQAQTFYEDHYLYKGLTWWFVREQIGLGLRERYQVPNKLPPELLALVTKLKVIESKSPRAR
Ga0318505_101166403	3300032060	Soil	MSQAQTFYEGHSFYEGLTWWFVREQIGQGLRERYQV
Ga0318504_105642131	3300032063	Soil	MSQAQTFYEDHYLYEGPTWSSGRELIGHGLRERYQVPKELPAKLLALIKKLDATESKSPRART
Ga0318510_104810961	3300032064	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVPNELPAQLLALIRM
Ga0318513_103133391	3300032065	Soil	MSQAQTFYEDHYLYEGLTWSSVRELIGHGLRERYQVPKELPAKLL
Ga0306924_103036903	3300032076	Soil	MSQAQTFYEGHSFYGGLTWSFVKKQIGQGLRERYELPTELSSNLLALIRKLEAA
Ga0306924_111814022	3300032076	Soil	MSQAQPFYEGHSFYGGLTWSFVQIGQGLRERYELPTELSSK
Ga0306924_114060121	3300032076	Soil	VVPGMSQAQTFYEGHSFYEGLTWWFVRERIGQGLRE
Ga0306924_116282742	3300032076	Soil	MSQAETFYEGHSFYGGLTWSSVRELIGRGLRERYQVPNELPAKLLA
Ga0318540_102446591	3300032094	Soil	MSQAETFYEAHPFYGGLTWSFVTEQIGQGLRDYYQVSTELPAKLLALLRK
Ga0318540_106131572	3300032094	Soil	MSQAQTFYEDHYLYKGLTWWFVREQIGLGLRERYQVPNKLPAELLALVTKLKVIESKSPRAR
Ga0306920_1002496396	3300032261	Soil	MSQVETFYEGHSFYEGLTWSFVREQIGQGLRQRYELPTKLPSKLLALIRKLEAAE
Ga0306920_1016800692	3300032261	Soil	MSQVQSFYEANSFYGGLTWSFVKEQIGQGLRERYELPTELSSKLLALIRKLEA
Ga0306920_1034228673	3300032261	Soil	MSQAETFCEGHSLYGGLTWASVSELIGQGLRERYQVPKELSPKLLA
Ga0306920_1038562731	3300032261	Soil	MSQVQSFYEGHSVYEGLTWSFVREQIGQGLRERYEVSTELPAKLLALIR
Ga0310914_104384624	3300033289	Soil	MSQVVQSFYEGHSFYEGLTWWFVRERIGQGLRERYQVPKELPAKLL
Ga0318519_104312032	3300033290	Soil	MSQAQTFYEGHSFYEGLTWWFVRERIGQGLRERYQV
Ga0318519_110355222	3300033290	Soil	MSQAETFYEGHSLYGGLTWSSVRELIGQGLRERYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences