Metagenome / Metatranscriptome Family F073974

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073974
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	62 residues
Representative Sequence	REAIVTQLVNRSAKADFKAIQILLGMLRDIGGDSDSHPPDPTFTEADQQIIQRIQARFRGEKG
Number of Associated Samples	96
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	78.33 %
% of genes from short scaffolds (< 2000 bps)	80.83 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.55% β-sheet: 0.00% Coil/Unstructured: 49.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03237	Terminase_6N	10.83
PF13450	NAD_binding_8	1.67
PF13185	GAF_2	0.83
PF14023	DUF4239	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.33 %
Unclassified	root	N/A	46.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.33 %
Unclassified	root	N/A	46.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.33 %
Unclassified	root	N/A	46.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	17.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.83 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.50 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Enterovirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Enterovirga	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.50 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Enterovirga rhinocerotis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Enterovirga → Enterovirga rhinocerotis	0.83 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10333518	Not Available	883	Open in IMG/M
3300005147\|Ga0066821_1012796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300005175\|Ga0066673_10280072	Not Available	970	Open in IMG/M
3300005450\|Ga0066682_10449487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300005451\|Ga0066681_10244006	Not Available	1088	Open in IMG/M
3300005454\|Ga0066687_10918890	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005555\|Ga0066692_10499935	Not Available	774	Open in IMG/M
3300005561\|Ga0066699_11221907	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006031\|Ga0066651_10703233	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006172\|Ga0075018_10331187	Not Available	758	Open in IMG/M
3300006172\|Ga0075018_10709287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	545	Open in IMG/M
3300006806\|Ga0079220_12088319	Not Available	507	Open in IMG/M
3300007255\|Ga0099791_10447235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300007258\|Ga0099793_10708272	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009012\|Ga0066710_102188979	Not Available	808	Open in IMG/M
3300009012\|Ga0066710_103482653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300009012\|Ga0066710_104362311	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010046\|Ga0126384_10272770	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300010320\|Ga0134109_10276439	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010322\|Ga0134084_10255115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300010326\|Ga0134065_10422820	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010343\|Ga0074044_11038785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	537	Open in IMG/M
3300012189\|Ga0137388_10094133	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300012203\|Ga0137399_11691505	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012210\|Ga0137378_11158114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300012349\|Ga0137387_10980502	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012362\|Ga0137361_11038284	Not Available	740	Open in IMG/M
3300012685\|Ga0137397_10992579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300012922\|Ga0137394_10614381	Not Available	919	Open in IMG/M
3300012927\|Ga0137416_11203265	Not Available	682	Open in IMG/M
3300012930\|Ga0137407_11729712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300012955\|Ga0164298_11078835	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012958\|Ga0164299_10336090	Not Available	944	Open in IMG/M
3300015264\|Ga0137403_11325206	Not Available	567	Open in IMG/M
3300016294\|Ga0182041_11754598	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300016294\|Ga0182041_12255699	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300016319\|Ga0182033_11074228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300016357\|Ga0182032_10457232	Not Available	1043	Open in IMG/M
3300016357\|Ga0182032_11551374	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300016371\|Ga0182034_11951124	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300016404\|Ga0182037_10790673	Not Available	817	Open in IMG/M
3300020579\|Ga0210407_10010606	All Organisms → cellular organisms → Bacteria → Proteobacteria	6868	Open in IMG/M
3300020579\|Ga0210407_11469963	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300020580\|Ga0210403_10288232	Not Available	1345	Open in IMG/M
3300020580\|Ga0210403_10444947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Enterovirga → Enterovirga rhinocerotis	1056	Open in IMG/M
3300020580\|Ga0210403_11367948	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300021170\|Ga0210400_10995767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300021178\|Ga0210408_10523790	Not Available	941	Open in IMG/M
3300021178\|Ga0210408_11224721	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300021180\|Ga0210396_10173610	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300021405\|Ga0210387_11565892	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300022722\|Ga0242657_1066709	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026360\|Ga0257173_1011791	Not Available	1010	Open in IMG/M
3300026369\|Ga0257152_1035037	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026446\|Ga0257178_1036395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300026508\|Ga0257161_1070573	Not Available	716	Open in IMG/M
3300026514\|Ga0257168_1070139	Not Available	774	Open in IMG/M
3300027070\|Ga0208365_1031423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300030916\|Ga0075386_12049263	Not Available	1342	Open in IMG/M
3300031231\|Ga0170824_103537097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853	Open in IMG/M
3300031231\|Ga0170824_116123188	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031231\|Ga0170824_117600499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300031545\|Ga0318541_10425502	Not Available	742	Open in IMG/M
3300031546\|Ga0318538_10291602	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300031546\|Ga0318538_10386720	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031680\|Ga0318574_10276113	Not Available	974	Open in IMG/M
3300031681\|Ga0318572_10442488	Not Available	773	Open in IMG/M
3300031681\|Ga0318572_10582091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300031682\|Ga0318560_10438134	Not Available	707	Open in IMG/M
3300031682\|Ga0318560_10538723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300031708\|Ga0310686_106226824	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031720\|Ga0307469_10095364	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300031736\|Ga0318501_10029835	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300031744\|Ga0306918_10575862	Not Available	882	Open in IMG/M
3300031744\|Ga0306918_10753467	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031748\|Ga0318492_10239290	Not Available	936	Open in IMG/M
3300031769\|Ga0318526_10188177	Not Available	843	Open in IMG/M
3300031782\|Ga0318552_10049965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1979	Open in IMG/M
3300031797\|Ga0318550_10373447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300031799\|Ga0318565_10662632	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031819\|Ga0318568_10504421	Not Available	754	Open in IMG/M
3300031833\|Ga0310917_10171683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1440	Open in IMG/M
3300031845\|Ga0318511_10566249	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031846\|Ga0318512_10270722	Not Available	841	Open in IMG/M
3300031879\|Ga0306919_11076040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300031897\|Ga0318520_10234039	Not Available	1092	Open in IMG/M
3300031910\|Ga0306923_11936470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300031941\|Ga0310912_10386922	Not Available	1088	Open in IMG/M
3300031941\|Ga0310912_10511705	Not Available	936	Open in IMG/M
3300031942\|Ga0310916_10257502	Not Available	1471	Open in IMG/M
3300031942\|Ga0310916_10520942	Not Available	1012	Open in IMG/M
3300031945\|Ga0310913_11141424	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031947\|Ga0310909_10210605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1617	Open in IMG/M
3300031962\|Ga0307479_12024321	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032001\|Ga0306922_11586498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300032043\|Ga0318556_10296497	Not Available	845	Open in IMG/M
3300032054\|Ga0318570_10407732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300032064\|Ga0318510_10080041	Not Available	1212	Open in IMG/M
3300032064\|Ga0318510_10505911	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300032180\|Ga0307471_103182662	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300032261\|Ga0306920_102385954	Not Available	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.50%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.50%
Sediment	Environmental → Aquatic → Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.17%
Loam	Environmental → Terrestrial → Soil → Loam	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_103335181	3300004080	Bog Forest Soil	GRRKLSKREAIVTQLVNRSAKADLKAIQILLGLLHDIEGDTDPPAPDPIFTETDQQIIQRIQARLQGEQE*
Ga0066821_10127961	3300005147	Soil	IVTQLVNRSAQADLKAIQILLGMLRDIEGHAEAGAADPDKFTEADEQIIQRIRARLRGEKE*
Ga0066673_102800722	3300005175	Soil	QLVNRSAKADLRAIQILLAMLREIEGHAAGAADAEGFTEADEQIIQRIRARLRGEKE*
Ga0070710_111455892	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AKADYKAIQILLGMLRDIEGNTDPHPSDAAFTEADLQIVQRIRTRLRDEKE*
Ga0066682_104494872	3300005450	Soil	LRRSIITQLVNRSAKPDLRAIQILFGMLRDIEGHADPVAADPSRVTEADQEIIRRIRARLQGEKE*
Ga0066681_102440062	3300005451	Soil	ISKREAIVTQLVNRSAKADYKAIQILFGMLRDIEGHADPVAADPSRVTEADQEIIRRIRARLQGEKE*
Ga0066687_109188901	3300005454	Soil	SKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADHDTFTEADEQIIQRIRARLRGEKE*
Ga0066692_104999352	3300005555	Soil	EAIVTQLVNRSAKADYKAIQILLGMLRDIESNTDAHSPDGAFTEADAQIIQRIRSRLRDEKE*
Ga0066699_112219071	3300005561	Soil	IITQLVNRSAKADLRAVQILLAMLRDIEGHAAAGPADADVFTEADEQIIQRIRARLRGEKE*
Ga0066651_107032332	3300006031	Soil	KRQAIVTQLVNRSAKADLKAIQILLTMLRDIESRADPGSADPAAFTEADQQIIQRIRARLRGDKE*
Ga0075018_103311871	3300006172	Watersheds	RKISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDLFTEADQQIIQRIRARLRGEKE*
Ga0075018_107092871	3300006172	Watersheds	SAKADYRAIQILLGMLREIEGDTDAHPSDAAFTEADQQIIQRIRSRLRDEKEYAHVCE*
Ga0066660_117213122	3300006800	Soil	CAKGDLKAIQILLAMVRDIESHAEAGSADPEVFTEADTQIIQRIGARLRGDKE*
Ga0079220_120883192	3300006806	Agricultural Soil	VRPINRSAKADLKAIQILLTMLRDIEARADPGSADPAGFTEADEQIIQRIRARLRGAKE*
Ga0099791_104472351	3300007255	Vadose Zone Soil	RSAKADYKAIQILLGMLRDIEGDTDLRPSDPTFTEADQQIIQRIRSRLRDEKE*
Ga0099793_107082722	3300007258	Vadose Zone Soil	KISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHTEAGSADPDVFTEADEQIIQRIRARLRGEKEKPR*
Ga0066710_1021889791	3300009012	Grasslands Soil	RRKIAKRQAIITQLVNRSAKADLKAIQILLTMLRDIESRADPGSADPAAFTEADQQIIQRIRARLRGATE
Ga0066710_1034826532	3300009012	Grasslands Soil	VNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDLFTEADAQIIQRIRARLRGEKE
Ga0066710_1043623111	3300009012	Grasslands Soil	TQLVNGSAKGDLKAIHILLGMLRDIEGHAEPDHDRVTEADAQILQRIRARLSGATK
Ga0099792_112304842	3300009143	Vadose Zone Soil	DYKAIQILLGMLRDVEGDTDPRPSDATFTEADQQIIQRIQKRLRGQKE*
Ga0126384_102727701	3300010046	Tropical Forest Soil	AIITQLVNRSAKADFKAIQILLGMLRDIESGSDPQPADPTFTEADQQIIARIKARLGGTEE*
Ga0134109_102764392	3300010320	Grasslands Soil	VTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDLFTEADQQIIQRIRARLRGEKE
Ga0134084_102551151	3300010322	Grasslands Soil	NGGQRKISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGRAETGAADADGFTEADEQIVQRIRARLRGEKE*
Ga0134065_104228201	3300010326	Grasslands Soil	NGGQRKISKREAIVTQLVNRSAKADYKAIQILLGMLRDIEGHAEPGAADHDKFTEADAQIIQRIRARLRGATE*
Ga0074044_110387851	3300010343	Bog Forest Soil	REAIVAQIVNGPAKADLKAIQILLGLLHGIEGDTDPPAPDPIFTETDQQIIQRIQARLQGEQE*
Ga0126381_1013098961	3300010376	Tropical Forest Soil	SAKADFKAIQILLGLLPDIEGDADPHPADPIFTEADQQIIQRVQARLRGEKE*
Ga0137388_100941331	3300012189	Vadose Zone Soil	TTQLVNRSAKADFKAIQIVLGMLRDIEGNTDPPSNPTATEADQQIIRRIQARLRGKKE*
Ga0137399_116915052	3300012203	Vadose Zone Soil	VTENGGQRKISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGSADPDVFTEADEQIIQRIRARLRGEKE*
Ga0137381_114006542	3300012207	Vadose Zone Soil	VVVTENGGRRKISKREAIVTQLVNGSAKGDLKAIQILLAMLRDIEGHAEPGAADPDLFTEADAQIIQRIRARLRGATE*
Ga0137378_111581142	3300012210	Vadose Zone Soil	IVAEDGGRRKISKREAIVTQLVNRSAKADYKAIQIVFAMLRDIEGHAEPGAADHDTFTEADARIVQRIRARLRGAKE*
Ga0137387_109805021	3300012349	Vadose Zone Soil	MAGVKISKREAIVTQLVNRSAKADYKAIQILLGMLRDIEGHAEPGAADHDKFTEADAQIIQRIRARLRGATE*
Ga0137361_110382841	3300012362	Vadose Zone Soil	SKREAIVTQLVNRSAKADYKAIQILLGMLRDIEGHAEPGAADHDKFTEADAQIIQRIRARLRGATE*
Ga0137397_109925791	3300012685	Vadose Zone Soil	KREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEDGSADPDVFTEADEQIIQRIRGRLRGEKE*
Ga0137394_106143811	3300012922	Vadose Zone Soil	PGGRRKVSKREAIVTQLVNRSAKADYRAIQILLGMLRDIEGDTDAHSSDAAFTEADRQIIQRIRSRLRDEKE*
Ga0137416_112032651	3300012927	Vadose Zone Soil	VTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGSADSDVFTEADEQIIQRIRARLRGEKE
Ga0137407_117297121	3300012930	Vadose Zone Soil	KISKREAIVTQLVNRSAKADYKAIQIVLGMLRDIEGHGEPGAVDPDLFTEADAQIIQRIRARLRGATE*
Ga0164298_110788351	3300012955	Soil	VTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADADLFTEADQQIIQRIRARLRGEKE
Ga0164299_103360901	3300012958	Soil	EAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDVFTEADEQIIQRIRARLRGEKE*
Ga0137403_113252061	3300015264	Vadose Zone Soil	RSAKGDYKAIQILLGMLRDIEGDTDAHSSDAAFTEADQQIIQRIRSRLRDEKE*
Ga0182041_117545981	3300016294	Soil	TKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDSDSHPADPTFTEADQQIIARIKARLGGAEE
Ga0182041_122556991	3300016294	Soil	REAIVTQLVNRSAKADFKAIQILLGMLRDIGGDSDSHPPDPTFTEADQQIIQRIQARFRGEKG
Ga0182033_110742281	3300016319	Soil	NGGRRVVTKREAIVTQLVNRSAKADFKAIQILFGMLRDIGGDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0182032_104572321	3300016357	Soil	NRSAKADFKAIQILLGMLRDIESDSDPQPVDTTFTEADQQIIARIKARLGGTKK
Ga0182032_115513741	3300016357	Soil	NGGRRLVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIERIQARFRGEKG
Ga0182034_119511242	3300016371	Soil	QLVNRSAKADFKAIQILLGMLRDSEGDSDPNSADPTFTEADQQIIARIKARLGGGDA
Ga0182037_107906732	3300016404	Soil	RRMVTKREAIVTQLVNRSAKADFKAIQILLGMLRDVGGDSDPHSADPTFTESDQQIIARIKARLGGAEE
Ga0210407_100106062	3300020579	Soil	MAHFGHITQLVNRSAKADLKAIQILLTMLREIESRADPGSADPAAFTEADQLIIQRIRARLRGEKE
Ga0210407_114699632	3300020579	Soil	ENGGRRKVSKREAIVTQLVNRSAKADYRAIQILLGMLRDIEGHAEAGSADPDVFTETDQQIIQQIRARLRGEKE
Ga0210403_102882321	3300020580	Soil	RKISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDKFTEADAQIIQRIRARLRGEKE
Ga0210403_104449471	3300020580	Soil	LVNRSAKADYRAIQILLGMLRDIEGHAEPGAADHDTFTEADAQIIQRIRARLRGAKE
Ga0210403_113679482	3300020580	Soil	EAIATQLVNCSAKGDFKAIQILLAMLRDIEGPAEPGAADHDLFTEADAQIIQRIRARLRGEKE
Ga0210400_109957671	3300021170	Soil	EAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAAAGAADPDLFTQADQQIIQRIRARLRGEKE
Ga0210408_103442412	3300021178	Soil	AKADFKAIQILLGMIRDIESDTDPHSSDPTFTEADQQIIQRLQARFRGEKG
Ga0210408_105237902	3300021178	Soil	RQAIITQLVNRSAKADLKAIQILLTMLRDIESRADPGSADPAAFTEADQQIIQQIRARLRGEKE
Ga0210408_112247211	3300021178	Soil	RRRKITKRQAIITQLVNRSAKADLKAIQILLTMLRDIEGRADPGSADPAPFTESDQQIIQRIRARLRGEKDKS
Ga0210396_101736102	3300021180	Soil	SSFSENGGRRKVSKREAIVTQLVNRSAKADYKAIQILLGMLRDIEGNTDPHPSDAAFTEADLQIIQRIRTRLRDEKE
Ga0210387_115658922	3300021405	Soil	IVTQLVNRSAKADFKAIQIVLGLVRDIESDTDPRSSDPTFTEADQQIIQRLQARFRDEKG
Ga0210383_115504672	3300021407	Soil	IQILLGLLHDIEGDTDPPASDPIFTEADQQIIRRMRARLRGDKE
Ga0242657_10667093	3300022722	Soil	MGRRRKIAKRQAIITQLVNRSAKADLKAIQILLTMLRDIEARADAGSADPAAFTEADQQIIQRIRARLRGEKE
Ga0257173_10117912	3300026360	Soil	IVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGSADPDVFTEADQQIIQRIRARLRGEK
Ga0257152_10350371	3300026369	Soil	ITKRQAIVTQLVNRSAKADLKAIQILLTMLRDIEGHAEAGSADSDVFTEADQQIIQRIRARLRGEKE
Ga0257178_10363951	3300026446	Soil	ISKREAIVTQLVNRSAQADLKAIQILLAMLRDIEGHAEAGSADPDAFTEADEQIIQRIRARLRGEKE
Ga0257161_10705732	3300026508	Soil	TQLVNRSAKADLKAIQILLMMRRDIEGRADPGSADPAAFTEADEQIIQRIRARLRGEKE
Ga0257168_10701392	3300026514	Soil	IVTQLVNRSAKADYKAIQILLGMLRDIEGHAEPGAADRDPFTEADAQIIQRIRARLRGAK
Ga0208365_10314231	3300027070	Forest Soil	RRTIPKREAIITQLVNRSAKADLKATQILLGMLRDLECRADPGSADPPAFTEADQQIIRRIRARLRDETE
Ga0209689_12858352	3300027748	Soil	KADFKAIQILLGMLREIEGDTDPHPAEPTVTEADQQIIQRIRARLRSEKE
Ga0075386_120492632	3300030916	Soil	TQLVNRSAKADFKAIQILLGMIRDIESDTDPHSSDPTFTEADQQIIQRLQARFRGEKG
Ga0170824_1035370971	3300031231	Forest Soil	AIVTQLVNRSAKADYKAIQILLAMLRDIEGHAEPGAADHDTITEADAQIIQRIRARLRGAKE
Ga0170824_1161231882	3300031231	Forest Soil	VTENGGRRKVSKREAIVTQLVNRSAKADYRAIQILLGMLRDIEGHAEAGSADPDVFTEADQQIIQQIRARLRGEKE
Ga0170824_1176004991	3300031231	Forest Soil	RKVSKREAIVTQLVNRSAKADYRAIQILLGMLRDIEGRAEPGAADPDTFTEADQQIIQRIQARLRGAKE
Ga0170818_1153160842	3300031474	Forest Soil	DFKAIQILLGMIRDIESDTDPHSSDPTFTEADQQIIQRLQARFRGEKG
Ga0318541_104255022	3300031545	Soil	IVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIQRIQARFRGEKG
Ga0318538_102916022	3300031546	Soil	MVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318538_103867202	3300031546	Soil	REAIVTQLVNRSAKADFKAIQILLGMLRDIGSDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0318574_102761131	3300031680	Soil	VTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318572_104424881	3300031681	Soil	REAIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIQRIQARFRGEKG
Ga0318572_105820911	3300031681	Soil	RMVTEREAIVTQLVNRPAKADFKAIQILLGMLRDIGGDSDSPPSDPTFTQADQQIIARIKARLGGAEE
Ga0318560_104381341	3300031682	Soil	VNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318560_105387231	3300031682	Soil	AIVTQLVNRSAKADFKAIQILLGMLRDIGGDSGSPPSDPTFTEADQQIIARIKARFRGEK
Ga0310686_1062268241	3300031708	Soil	EAIVTQLVNRSAKADLKATQILLGMLRDLENRADPGPAETAAFGEADQQIIQRIQARLQGEKE
Ga0307469_100953641	3300031720	Hardwood Forest Soil	VNRSAQADLKAIQILLAMLRDIEGHAEAGAADPDKFTEADAQIIQRIRARLRGEKE
Ga0318501_100298353	3300031736	Soil	VTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDSDSHPADPTFTEADQQIIARIKARLGGAEE
Ga0306918_105758621	3300031744	Soil	TQLVNRSAKADFKAIQILLGMLRDVGGDSDPHSADPTFTESDQQIIARIKARLGGAEE
Ga0306918_107534672	3300031744	Soil	MVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGSDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0318492_102392902	3300031748	Soil	IVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318526_101881772	3300031769	Soil	ITQLVNRSAKADFKAIQIRLGMLRDIEGDSDPQPADTTFTEADQQIIARIKARLGGAAE
Ga0318521_106091342	3300031770	Soil	VTDNGGRRMVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDSDTHPADPTFTEADQQIIQRIQARFRGEKG
Ga0318552_100499651	3300031782	Soil	IVTQLVNRSAKADFKAIQILLGMLRDIGGDSDSHPADPTFTEADQQIIARIKARLGGAEE
Ga0318550_103734471	3300031797	Soil	GGRRKVSKREAIITQLVNRSAKADFKAIQILLGLLRDIESDSDPQPADPTFTEADQQIIARIKARLGGGDA
Ga0318565_106626322	3300031799	Soil	VNRSAKADFKAIQILLAMLRDIEGDSDPHSADPTFTEADQQIIARIKARLRGGGA
Ga0318568_105044211	3300031819	Soil	REAIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPSFTEADQQIIQRIQARFRGEKG
Ga0310917_101716831	3300031833	Soil	AIVTQLVNRPAKADFKAIQILLGMLRDIGGDSDSPPSDPTFTQADQQIIARIKARLGGAE
Ga0310917_103032652	3300031833	Soil	KADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIQRIQARFRGEKG
Ga0318511_105662492	3300031845	Soil	KREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTQPSDPTFTEADQQIIQRIQARFRGEKG
Ga0318512_102707222	3300031846	Soil	VTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318512_106722562	3300031846	Soil	ADFKAIQILLGMLRDIGGDSGSQPADPTFTEADQQIIERIQARFRGEKG
Ga0306919_110760401	3300031879	Soil	AIVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAE
Ga0318551_105673212	3300031896	Soil	ADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIERIQARFRGEKG
Ga0318520_102340392	3300031897	Soil	IPKREAIITQLVNRSAKADLKATQILLGMLRDLECRADPGSADPPAFTEADQQIIRRIQARLRDDTE
Ga0306923_119364702	3300031910	Soil	KREAIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIQRIQARFRGEKG
Ga0306921_112161651	3300031912	Soil	KADLKAIQILLGMLRDIESDSDPHPGDPTFAETDQQIIQRIQARLHGDKE
Ga0310912_103869222	3300031941	Soil	IVTQLVNRSAKADFKAIQILLGMLRDIGSDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0310912_105117052	3300031941	Soil	RRVVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIEDDGDPQPADPTFTEADQQIIARIKARLGGGDA
Ga0310916_102575021	3300031942	Soil	QLVNRSAKADFKAIQILLGMLRDIGGDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0310916_105209422	3300031942	Soil	EAIVTQLVNRSAKADFKAIQILFGMLRDIGGDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0310913_111414241	3300031945	Soil	KREAIVTQLVNRSAKADFKAIQILLAMLRDIEGDSDPHSADPTFTEADQQIIARIKARLRGGGA
Ga0310909_102106054	3300031947	Soil	MVTEREAIVTQLVNRPAKADFKAIQILLGMLRDIGGDSDSPPSDPTFTQADQQIIARIKARLGGAEE
Ga0310909_102340082	3300031947	Soil	DNGGRRMVTKREAIVTQLVNRSAKADFKAIQILLGMLRDIGSDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0306926_111805312	3300031954	Soil	RSAKADFKAIQILFGMLRDIGGDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0307479_101060973	3300031962	Hardwood Forest Soil	LKAIQILLGLLHDIEGDTDPPASDPIFTEADQQIIRRMRARLRGDKE
Ga0307479_120243212	3300031962	Hardwood Forest Soil	NGGRRKVSKREAIVTQLVNRSAKADYKAIQILLGMLRDIEGNTDPHPSDAAFTEADLQIIQRIRTRLRDEKE
Ga0306922_115864982	3300032001	Soil	TKREAIVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318556_102964972	3300032043	Soil	QLVNRSAKADFKAIQILLGMLRDIGGDSDSHPADPTFTEADQQIIARIKARLGGAEE
Ga0318570_104077322	3300032054	Soil	LVNRSAKADFKAIQILLGMLRDIGSDSDSHPADPTFTEADQQIIQRIQARFRGEKG
Ga0318570_105250392	3300032054	Soil	FKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIERIQARFRGEKG
Ga0318510_100800412	3300032064	Soil	REAIVTQLVNRSAKADFKAIQILLGMLRDIGGESDSHPSDPTFTEADQQIIARIKARLGGAEE
Ga0318510_105059112	3300032064	Soil	AIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTEADQQIIERIQARFRGEK
Ga0306924_113521192	3300032076	Soil	SAKADFKAIQILLGMLRDIGGDNDTHPSDPTFTDADQQIIQRIQARFRGEKG
Ga0307471_1031826622	3300032180	Hardwood Forest Soil	ENGGRRKVSKREAIVTQLVNRSAKADYRAIQILLGMLRDIEDHAEPGSADPDTITEADAQIIQRIRTRLRGAKE
Ga0306920_1023859542	3300032261	Soil	AIVTQLVNRSAKADFKAIQILLGMLRDIGGDNDTHPSDPSFTEADQQIIQRIQARFRGEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073974

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences