Metagenome / Metatranscriptome Family F073959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	45 residues
Representative Sequence	MFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.90 %
% of genes near scaffold ends (potentially truncated)	47.50 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.333 % of family members)
Environment Ontology (ENVO)	Unclassified (45.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF01609	DDE_Tnp_1	22.50
PF13564	DoxX_2	1.67
PF01526	DDE_Tnp_Tn3	1.67
PF11818	DUF3340	1.67
PF00274	Glycolytic	0.83
PF03466	LysR_substrate	0.83
PF08240	ADH_N	0.83
PF13450	NAD_binding_8	0.83
PF00210	Ferritin	0.83
PF13533	Biotin_lipoyl_2	0.83
PF09995	MPAB_Lcp_cat	0.83
PF00005	ABC_tran	0.83
PF13377	Peripla_BP_3	0.83
PF08388	GIIM	0.83
PF02371	Transposase_20	0.83
PF09364	XFP_N	0.83
PF00805	Pentapeptide	0.83
PF00107	ADH_zinc_N	0.83
PF00702	Hydrolase	0.83
PF14691	Fer4_20	0.83
PF04984	Phage_sheath_1	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	22.50
COG3293	Transposase	Mobilome: prophages, transposons [X]	22.50
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	22.50
COG5421	Transposase	Mobilome: prophages, transposons [X]	22.50
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	22.50
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	22.50
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.67
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.83
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.33 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	20.00 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	9.17 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	1.67 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.83 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.83 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	20.00 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	9.17 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.67 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	1.67 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.83 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.83 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Rickettsiales endosymbiont of Peranema trichophorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	9.17 %
Thiohalocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa	2.50 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.67 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.83 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.83 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	0.83 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Rickettsiales endosymbiont of Peranema trichophorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	9.17 %
unclassified Thiohalocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa	2.50 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.67 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.83 %
unclassified Nitrosomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas	0.83 %
Thiocapsa bogorovii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa bogorovii	0.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Rickettsiales endosymbiont of Peranema trichophorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	9.17 %
Thiohalocapsa sp. PB-PSB1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	2.50 %
Candidatus Jettenia ecosi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia ecosi	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.67 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.83 %
Nitrosomonas sp. Nm84	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. Nm84	0.83 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.83 %
Thiocapsa bogorovii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa bogorovii	0.83 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01E26NZ	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
2170459004\|F62QY1Z01BF6J1	Not Available	530	Open in IMG/M
2170459005\|F1BAP7Q01A3NMR	Not Available	510	Open in IMG/M
2170459010\|GIO7OMY02GRL7R	Not Available	525	Open in IMG/M
3300001083\|JGI12678J13193_1000919	Not Available	1590	Open in IMG/M
3300001083\|JGI12678J13193_1003714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	651	Open in IMG/M
3300001178\|JGI12646J13576_102171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	738	Open in IMG/M
3300001178\|JGI12646J13576_102192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	734	Open in IMG/M
3300001612\|JGI20251J16332_10015	Not Available	1748	Open in IMG/M
3300002245\|JGIcombinedJ26739_100217949	Not Available	1801	Open in IMG/M
3300002245\|JGIcombinedJ26739_100887667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	773	Open in IMG/M
3300003218\|JGI26339J46600_10012700	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300003219\|JGI26341J46601_10090437	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300003223\|JGI26343J46809_1001624	Not Available	1579	Open in IMG/M
3300003223\|JGI26343J46809_1002237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	1412	Open in IMG/M
3300003368\|JGI26340J50214_10081482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	847	Open in IMG/M
3300004081\|Ga0063454_100029310	Not Available	1902	Open in IMG/M
3300005434\|Ga0070709_10119751	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300005434\|Ga0070709_10388359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	1039	Open in IMG/M
3300005437\|Ga0070710_10190535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	1289	Open in IMG/M
3300005437\|Ga0070710_10546355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	799	Open in IMG/M
3300005439\|Ga0070711_100641621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	889	Open in IMG/M
3300005439\|Ga0070711_101074986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	692	Open in IMG/M
3300005445\|Ga0070708_101047321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	764	Open in IMG/M
3300005445\|Ga0070708_101219600	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005454\|Ga0066687_10138811	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005467\|Ga0070706_100420784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1243	Open in IMG/M
3300005471\|Ga0070698_100818690	Not Available	875	Open in IMG/M
3300005549\|Ga0070704_100192718	Not Available	1639	Open in IMG/M
3300005610\|Ga0070763_10697052	Not Available	594	Open in IMG/M
3300006028\|Ga0070717_10452341	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006028\|Ga0070717_11676550	Not Available	575	Open in IMG/M
3300006052\|Ga0075029_100228216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. Nm84	1170	Open in IMG/M
3300006059\|Ga0075017_100571296	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006059\|Ga0075017_100762356	Not Available	746	Open in IMG/M
3300006086\|Ga0075019_10065840	Not Available	2053	Open in IMG/M
3300006102\|Ga0075015_100992454	Not Available	513	Open in IMG/M
3300006172\|Ga0075018_10636594	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300006175\|Ga0070712_101389359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	612	Open in IMG/M
3300006354\|Ga0075021_10837178	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	595	Open in IMG/M
3300007788\|Ga0099795_10095821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	1157	Open in IMG/M
3300007788\|Ga0099795_10542167	Not Available	547	Open in IMG/M
3300009143\|Ga0099792_10222776	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300010339\|Ga0074046_10387185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300010341\|Ga0074045_10206517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300010341\|Ga0074045_10841247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300010341\|Ga0074045_10932014	Not Available	547	Open in IMG/M
3300010341\|Ga0074045_10999161	Not Available	526	Open in IMG/M
3300010343\|Ga0074044_10003000	All Organisms → cellular organisms → Bacteria	14561	Open in IMG/M
3300010343\|Ga0074044_10046231	Not Available	3005	Open in IMG/M
3300010343\|Ga0074044_10264846	Not Available	1133	Open in IMG/M
3300010343\|Ga0074044_10345779	Not Available	976	Open in IMG/M
3300010343\|Ga0074044_10550213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	753	Open in IMG/M
3300010371\|Ga0134125_11771211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	672	Open in IMG/M
3300012199\|Ga0137383_10534705	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012205\|Ga0137362_11050983	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012361\|Ga0137360_10318254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1296	Open in IMG/M
3300012361\|Ga0137360_10826879	Not Available	797	Open in IMG/M
3300012361\|Ga0137360_10950907	Not Available	741	Open in IMG/M
3300012361\|Ga0137360_11690731	Not Available	538	Open in IMG/M
3300012685\|Ga0137397_10884247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	662	Open in IMG/M
3300012917\|Ga0137395_10308501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	1122	Open in IMG/M
3300012922\|Ga0137394_11375797	Not Available	567	Open in IMG/M
3300012955\|Ga0164298_10210464	Not Available	1144	Open in IMG/M
3300014156\|Ga0181518_10160050	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia ecosi	1200	Open in IMG/M
3300014200\|Ga0181526_10624513	Not Available	680	Open in IMG/M
3300017930\|Ga0187825_10188201	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300017946\|Ga0187879_10456815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	708	Open in IMG/M
3300017947\|Ga0187785_10197275	Not Available	874	Open in IMG/M
3300017994\|Ga0187822_10320022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	552	Open in IMG/M
3300020579\|Ga0210407_10137896	Not Available	1874	Open in IMG/M
3300021171\|Ga0210405_10080449	Not Available	2568	Open in IMG/M
3300021171\|Ga0210405_11286861	Not Available	537	Open in IMG/M
3300021401\|Ga0210393_10312742	Not Available	1277	Open in IMG/M
3300021403\|Ga0210397_10009652	All Organisms → cellular organisms → Bacteria	5828	Open in IMG/M
3300021404\|Ga0210389_10018871	All Organisms → cellular organisms → Bacteria	5330	Open in IMG/M
3300021404\|Ga0210389_10300776	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300021405\|Ga0210387_10255425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1534	Open in IMG/M
3300021405\|Ga0210387_10494193	Not Available	1087	Open in IMG/M
3300021407\|Ga0210383_10082704	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300021407\|Ga0210383_10084338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2664	Open in IMG/M
3300021439\|Ga0213879_10012727	Not Available	1873	Open in IMG/M
3300021478\|Ga0210402_11622977	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia ecosi	573	Open in IMG/M
3300022507\|Ga0222729_1071920	Not Available	511	Open in IMG/M
3300022714\|Ga0242671_1006079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1322	Open in IMG/M
3300022715\|Ga0242678_1007051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1112	Open in IMG/M
3300023056\|Ga0233357_1001708	Not Available	1732	Open in IMG/M
3300024288\|Ga0179589_10205248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	862	Open in IMG/M
3300025922\|Ga0207646_10756608	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300025922\|Ga0207646_11169154	Not Available	675	Open in IMG/M
3300025939\|Ga0207665_10833950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	729	Open in IMG/M
3300026340\|Ga0257162_1035178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	621	Open in IMG/M
3300026354\|Ga0257180_1032094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	716	Open in IMG/M
3300026355\|Ga0257149_1042230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	653	Open in IMG/M
3300026475\|Ga0257147_1038795	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300026507\|Ga0257165_1042991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	806	Open in IMG/M
3300026880\|Ga0209623_1000457	Not Available	1752	Open in IMG/M
3300027000\|Ga0207803_1037150	Not Available	569	Open in IMG/M
3300027297\|Ga0208241_1002993	Not Available	2070	Open in IMG/M
3300027521\|Ga0209524_1121837	Not Available	544	Open in IMG/M
3300027546\|Ga0208984_1021153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	1319	Open in IMG/M
3300027575\|Ga0209525_1154952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	522	Open in IMG/M
3300027674\|Ga0209118_1027071	Not Available	1780	Open in IMG/M
3300027680\|Ga0207826_1006932	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300027681\|Ga0208991_1147968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	695	Open in IMG/M
3300027698\|Ga0209446_1014803	Not Available	1920	Open in IMG/M
3300027701\|Ga0209447_10191057	Not Available	561	Open in IMG/M
3300027812\|Ga0209656_10005889	All Organisms → cellular organisms → Bacteria	7865	Open in IMG/M
3300027812\|Ga0209656_10023037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa bogorovii	3785	Open in IMG/M
3300027812\|Ga0209656_10045966	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300027889\|Ga0209380_10059130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	2180	Open in IMG/M
3300028023\|Ga0265357_1010850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	922	Open in IMG/M
3300030937\|Ga0138302_1473307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales endosymbiont of Peranema trichophorum	871	Open in IMG/M
3300031718\|Ga0307474_10117297	Not Available	1996	Open in IMG/M
3300031720\|Ga0307469_11739722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	601	Open in IMG/M
3300031754\|Ga0307475_11268751	Not Available	572	Open in IMG/M
3300031820\|Ga0307473_11140861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	576	Open in IMG/M
3300031962\|Ga0307479_11970214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.83%
Aquatic	Environmental → Aquatic	18.33%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.83%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Sediment	Environmental → Aquatic → Sediment	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Loam	Environmental → Terrestrial → Soil → Loam	31.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.33%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	8.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.17%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001083	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001178	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3	Environmental	Open in IMG/M
3300001612	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF017	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_2556820	2035918004	Soil	AQAGDAAVGGMFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKKQINQMISTN
E4B_04631070	2170459004	Grass Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFGFYGYRINILTS
E41_06196860	2170459005	Grass Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGYPMSILTS
F62_02073740	2170459010	Grass Soil	GDATVRGMLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYIISILTS
JGI12678J13193_10009192	3300001083	Forest Soil	MGGMFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK*
JGI12678J13193_10037142	3300001083	Forest Soil	VSGVFDFAVFAIGRADQADRITAVALNFEMKGKRFAFDGY*
JGI12654J13325_10005402	3300001160	Forest Soil	MFDFAALAEGGADETDRITPVGLNFEMKPGRIAFDGYYITLFTC*
JGI12646J13576_1021711	3300001178	Forest Soil	VSGVFDFAVFAIGRADQADRSTAVALNFEMKRKRFAVDGYPISILIN
JGI12646J13576_1021921	3300001178	Forest Soil	MLDLAIFAKGRADETDRITAVALNFEMKGKRFAFNGYRISILTSQNQ
JGI20251J16332_100152	3300001612	Forest Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTG*
JGIcombinedJ26739_1002179492	3300002245	Forest Soil	MLDFAIFAKGRADETDRMTAVALNFEMKGKRFAFNGYLKSTLTS*
JGIcombinedJ26739_1002232992	3300002245	Forest Soil	MFDFAALAEGGADETDRITPVGLNFEMKPGRIAFDGYYITLLTC*
JGIcombinedJ26739_1008876672	3300002245	Forest Soil	VFDFAVFAIGRADQADRSTAVALNFEMKRKRFAVDGYPISILINHTQQINSK
JGI26339J46600_100127002	3300003218	Bog Forest Soil	VFDFAVLAIGRADKAERITAVALNFKMKGKRFAFDGYQKSKLIY*
JGI26341J46601_100904372	3300003219	Bog Forest Soil	VSGVFDFAVLAIGRADKAERITAVALNFKMKGKRFAFDGYQKSKLIY*
JGI26343J46809_10016242	3300003223	Bog Forest Soil	VFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSRLIY*
JGI26343J46809_10022372	3300003223	Bog Forest Soil	VSGVFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSRLIY*
JGI26340J50214_100814821	3300003368	Bog Forest Soil	VFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSKLIY*
Ga0063454_1000293102	3300004081	Soil	VGGMFDFALLAKGRADEADWSTAVALNFEMKGKEFAFNGY*
Ga0070709_101197512	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLDFAIFAKGRADKTDRITAVALNFEVKGKRFVFNGYRISILTSQNQV*
Ga0070709_103883591	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLISKIIR*
Ga0070710_101905352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLDFAIFAKGRADKTDRITAVALNFEVKGKRFAFNGYRISILTSQNQV*
Ga0070710_105463551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VFDFAVFAIGRADQADRSTAVALNFEMKRKRFAVDGYPISILINHTQQINS
Ga0070711_1006416212	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSGVFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLTSKIIR*
Ga0070711_1010749861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTSHNQA*
Ga0070708_1010473212	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK*
Ga0070708_1012196001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DFAVLAKRRADEADRITAVALNFEMKGKRLAFDGYQISTSINNNQSHIA*
Ga0066687_101388112	3300005454	Soil	VFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYHKSKLIN*
Ga0070706_1004207842	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GGMFDFAVLAKRRADEADRITAVALNFEMKGKRVAFNGYQISMSISNDQ*
Ga0070698_1008186902	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VGGMFDFAVLAKRRADEADRITAVALNFEMKGKRFAFDNQISTSINNNQSHIA*
Ga0070704_1001927181	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VGGVFDFAVLAKRRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK*
Ga0070763_106970521	3300005610	Soil	GMLDFAIFAKGRADETDRITAVALNFEVKGKMFAFNGYRISILTG*
Ga0070717_104523414	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AGDASVGGMFDFAVLAKRRADEADRITAVALNFEMKGKRVAFNGYQISMSINNNQ*
Ga0070717_116765501	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VGGMFDFAVLAKRRADEADRITAVALNFEMKGKRFAFDGY*
Ga0075029_1002282162	3300006052	Watersheds	RVLDFAMLAIGRAEEADRITAVALNFEMKGKWFASDGH*
Ga0075017_1005712962	3300006059	Watersheds	VSGVFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSKLIY*
Ga0075017_1007623562	3300006059	Watersheds	SQAGDAPMGRVLDFAMLAIGRAEEADRITAVALNFEMKGKRFASDGH*
Ga0075019_100658403	3300006086	Watersheds	VSGVFDFAVLAIGRADKADRITAVALNFKMKGKRFAFYGYQKSKLIY*
Ga0075015_1009924541	3300006102	Watersheds	ASVGGMFDFAVLAKRRADDADRITAVALNFEMKWKRFAFDGYQISTLINPNQLK*
Ga0075018_106365941	3300006172	Watersheds	GDASVGGMFDFAVLAKRRADEADRITAVALNFEMKGKRFAFDGYQISTSINNNQSHIV*
Ga0070712_1013893591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSGVFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLISKIIR*
Ga0075021_108371782	3300006354	Watersheds	VFDFAVFAIGRTDEADRSTAVALNFEMKGKRFAFDGYPMSISTG*
Ga0099795_100958211	3300007788	Vadose Zone Soil	MFDSAVLAKRRADDADRITAVALNFEMKGKRFAFDGYPISTLIN*
Ga0099795_105421671	3300007788	Vadose Zone Soil	AVSGVFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLISKIIR*
Ga0099792_102227762	3300009143	Vadose Zone Soil	VFDFAVFAIGRADQADRSTAVALNFEMKRKRFAVDGYLISKIINQ*
Ga0074046_103871852	3300010339	Bog Forest Soil	GMFDFAVLAIGRADQADRITAVALNFEMKGERFASNGHQIRTLNSNNQAKTT*
Ga0074045_102065173	3300010341	Bog Forest Soil	GRADKAERITAVALNFKMKGKKIAFDGYQKSKLIY*
Ga0074045_108412471	3300010341	Bog Forest Soil	VLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSRLIY*
Ga0074045_109320142	3300010341	Bog Forest Soil	PMGRVLDFAMLAIGRAEEADRITAVALNFEMKGKWFASDGH*
Ga0074045_109991612	3300010341	Bog Forest Soil	GDAPMGRVLDFAMLAIGRAEEADRITAVALNFEMKGKWFASNGH*
Ga0074044_1000300017	3300010343	Bog Forest Soil	DFAVLAIGRADKAERITAVALNFKMKGKRFAFDGYQKSKLIH*
Ga0074044_100462313	3300010343	Bog Forest Soil	VLDFAMLAIGRAEEADRITAVALNFEMKGKWFASDGH*
Ga0074044_102648463	3300010343	Bog Forest Soil	DAAVGGMFDFAVLAIGRADQADRITAVALNFEMKGERFASNGHQVSTLNSNNQAKTT*
Ga0074044_103457791	3300010343	Bog Forest Soil	AVGGMFDFPVLAIGRADQADRITAVALNFEMKGERFVSNGHKISTLNSNNQEKTT*
Ga0074044_105502132	3300010343	Bog Forest Soil	MLDFAVFAIGRTDEADRITAVALNFEMKGERSVFNGY*
Ga0134125_117712111	3300010371	Terrestrial Soil	MFDFALLAKGGADETDRSTAVALNFEMKGKRFAFDGYYKSKLIK*
Ga0137383_105347052	3300012199	Vadose Zone Soil	VGGMFDFAVLAIGRADQADRITAVALNFEMKGERFASNGHQISALNSNNQAKTI*
Ga0137362_110509832	3300012205	Vadose Zone Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILNR*
Ga0137360_103182543	3300012361	Vadose Zone Soil	DFALLAKRGADEADRITAVALNFEVKRERFAFNGH*
Ga0137360_108268792	3300012361	Vadose Zone Soil	AAVGGMFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK*
Ga0137360_109509071	3300012361	Vadose Zone Soil	GGMFDFALLAKRGADEADRITAVALNFEVKGERFAFNGH*
Ga0137360_116907312	3300012361	Vadose Zone Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGY*
Ga0137397_108842472	3300012685	Vadose Zone Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGYPMSILTS*
Ga0137395_103085011	3300012917	Vadose Zone Soil	MFDFAVLAIGRADQADRITAVALNFEMKGKRFAFDGYLISKIIR*
Ga0137394_113757971	3300012922	Vadose Zone Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTS*
Ga0164298_102104641	3300012955	Soil	VFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLTSKIIR*
Ga0181518_101600501	3300014156	Bog	MFDFAVLAIGRADQADRITAVALNFEMKGKRFAFNGHQISTLNSNNQAKTT*
Ga0181526_106245132	3300014200	Bog	MTVRQGRSPIQAGDAAVGGMFDFAIFAKGRADETDRITAVTLNFEMKGAWPAFNGYQISI
Ga0187825_101882011	3300017930	Freshwater Sediment	VSGVFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSKLIY
Ga0187879_104568151	3300017946	Peatland	DFAVLAIGRADQADRITAVALNFEMKGDRFASNGHQISTLNSNNQVKTL
Ga0187785_101972751	3300017947	Tropical Peatland	LQQFELPQTQAGDAPVSGMFDFAILAIGGADEADRIAAGALNLEMEGKRFSFNGH
Ga0187822_103200222	3300017994	Freshwater Sediment	MFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSKLIY
Ga0210407_101378962	3300020579	Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTG
Ga0210405_100804491	3300021171	Soil	VFDFAVFAIGRADQADRITAVALNFEMKGKRFAFDGYQKSKLIN
Ga0210405_112868612	3300021171	Soil	MLDFAIFAKGRTDETDRMTAVALNFEMKGKRFAFNGYLRSTLTS
Ga0210393_103127421	3300021401	Soil	GMLDFAIFAKGRADETDRITAVALNFEVKGKRCAFNGYRTSILNS
Ga0210397_100096521	3300021403	Soil	DATVGGMLDFAIFAKGRADETDRITPVALNFEMKGKRFAFNGYQISILAS
Ga0210389_100188711	3300021404	Soil	DATVGGMLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGYQISILAS
Ga0210389_103007761	3300021404	Soil	TVGGMLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGY
Ga0210387_102554251	3300021405	Soil	FAKGRADETDRITAVALNFEVKGKRFAFNGYRISMLTS
Ga0210387_104941932	3300021405	Soil	FAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTG
Ga0210383_100827041	3300021407	Soil	ATVGGMLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGY
Ga0210383_100843385	3300021407	Soil	DFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRISILTG
Ga0213879_100127271	3300021439	Bulk Soil	MFDFAVLAKRRADDADRITAVALNFEMKWKRFAFDGY
Ga0210402_116229772	3300021478	Soil	SGMLDLAIFAKGRADETDRITAVALNFEMKGKRFAFNGYRISIFTS
Ga0222729_10719201	3300022507	Soil	VGGMLDFAIFAKGRADETDRITAVALNFEVKGKRVAFNGY
Ga0242671_10060792	3300022714	Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGYRISILTG
Ga0242678_10070512	3300022715	Soil	MFDFAVLAKRRADDADRITAVALNFEVKGKRFAFNGYRISILTS
Ga0233357_10017081	3300023056	Soil	VFDFAVFAIGRADQADRITAVALNFEMKGKRFAFDGY
Ga0179589_102052481	3300024288	Vadose Zone Soil	VFDFAVFAIGRADQADRSTAVALNFEMKRKRFAVDGYPISILI
Ga0207646_107566083	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DAAVGGMFDFALLAKRGADEADRITAVALNFEAKGERFAFNGHQISI
Ga0207646_111691541	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GDAAVGGMFDFALLAKRGADEADRITAVALNFEVKGERFAFNGHQISI
Ga0207665_108339502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSGVFDFAVFAIGRTDEADRSAAVALNFEMKGKRFAFDGYLISKIIR
Ga0257162_10351781	3300026340	Soil	MFDSAVLAKRRADDADRITAVALNFEMKGKRFAFDGYPISTLINENQSQLF
Ga0257180_10320941	3300026354	Soil	VFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGY
Ga0257149_10422302	3300026355	Soil	VSGVFDFAVFAIGRADQADRITAVALNFEMKGKRFAFDGY
Ga0257147_10387951	3300026475	Soil	MLDFAIFAKGRANETDRITAVALNFEVKGKRFAFNGYRISILTSHNQAYN
Ga0257165_10429912	3300026507	Soil	MLDFAIFAKGRTDETDRMTAVALNFEMKGKRFAFNGYLR
Ga0209623_10004572	3300026880	Forest Soil	VSGVFDFAVLAIGRADQADRITAVALNFEMKGKRFAFDGY
Ga0207803_10371502	3300027000	Tropical Forest Soil	GGMFDFAVLAIGRADQADRSPAVALNFEMKWQRFAFNGH
Ga0208241_10029932	3300027297	Forest Soil	MLDLAIFAKGRADETDRITAVALNFEMKGKRFAFNGYRISILTG
Ga0209524_11218372	3300027521	Forest Soil	AVLAIGRADEADRITAVALNFEMKGKRFAFDGYHKNKLIN
Ga0208984_10211532	3300027546	Forest Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFSFNGYSISILTSYNQVQNI
Ga0209525_11549521	3300027575	Forest Soil	MLDFAIFAKGRADETDRMTAVALNFEMKGKRFAFNGYLKSTLTS
Ga0209118_10270712	3300027674	Forest Soil	VSGVFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK
Ga0207826_10069322	3300027680	Tropical Forest Soil	VGGVFDFALLAKGGADKADRSPAVALNLEVKRERSAFNGH
Ga0208991_11479681	3300027681	Forest Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFSFNGYSISILTSYNQVKNIK
Ga0209446_10148031	3300027698	Bog Forest Soil	VFDFAVLAIGRADKADRITAVALNFKMKGKRFAFDGYQKSRLIY
Ga0209447_101910571	3300027701	Bog Forest Soil	AVGGVFDFAVLAIGRADEADRSTAVALNFEMKRKRFAFNGHQKSIIVRYNQVKM
Ga0209656_1000588910	3300027812	Bog Forest Soil	APMGRVLDFAMLAIGRAEEADRITAVALNFEMKGKWFASDGH
Ga0209656_100230371	3300027812	Bog Forest Soil	VSGVFDFAVLAIGRADKAERITAVALNFKMKGKRFAFDGYQKSKLIY
Ga0209656_100459663	3300027812	Bog Forest Soil	SGVFDFAVLAIGRADKAERITAVALNFKMKGKRFAFDGYQKSKLIN
Ga0209380_100591302	3300027889	Soil	AQAGDAAVGGMFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYHKSKLIN
Ga0265357_10108501	3300028023	Rhizosphere	MLDLAIFAKGRADETDRITAVALNFEMKGKRFAFNGYRISILT
Ga0138302_14733072	3300030937	Soil	MLDFAIFAKGRADETDRITAVALNFEVKGKRFAFNGYRIST
Ga0307474_101172973	3300031718	Hardwood Forest Soil	MFDFALLAIGGADEADRITAVALNFEVKRGWFATNGY
Ga0307469_117397222	3300031720	Hardwood Forest Soil	MFDFAVLAKRRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK
Ga0307475_112687511	3300031754	Hardwood Forest Soil	AAVGGMFDFALLAKGGADETDRSTAVALNFEMKGKGLAFNGHQISILTRK
Ga0307473_111408611	3300031820	Hardwood Forest Soil	MLDFAIFAKGRADETDRITAVALNFEMKGKRFAFNGYL
Ga0307479_119702142	3300031962	Hardwood Forest Soil	MFDFAVLAIGRADEADRITAVALNFEMKGKRFAFDGYYKSKLIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences