Metagenome / Metatranscriptome Family F073956

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073956
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	65 residues
Representative Sequence	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVN
Number of Associated Samples	103
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.09 %
% of genes near scaffold ends (potentially truncated)	85.83 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.667 % of family members)
Environment Ontology (ENVO)	Unclassified (39.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.81% β-sheet: 13.98% Coil/Unstructured: 60.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00072	Response_reg	2.50
PF04392	ABC_sub_bind	1.67
PF00498	FHA	1.67
PF03401	TctC	0.83
PF12850	Metallophos_2	0.83
PF02026	RyR	0.83
PF13676	TIR_2	0.83
PF00239	Resolvase	0.83
PF14197	Cep57_CLD_2	0.83
PF01384	PHO4	0.83
PF05235	CHAD	0.83
PF00211	Guanylate_cyc	0.83
PF13670	PepSY_2	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.67
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.83
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.83
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
All Organisms	root	All Organisms	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
cellular organisms	root	All Organisms → cellular organisms	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.50 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.50 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.67 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	14.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.50 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.67 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.83 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.50 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.33 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.67 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.67 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.83 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.50 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	2.50 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.67 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.67 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.83 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100467176	Not Available	865	Open in IMG/M
3300000789\|JGI1027J11758_12528867	Not Available	878	Open in IMG/M
3300002245\|JGIcombinedJ26739_100583601	Not Available	995	Open in IMG/M
3300004643\|Ga0062591_101806844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	624	Open in IMG/M
3300005332\|Ga0066388_108757836	Not Available	502	Open in IMG/M
3300005363\|Ga0008090_10063529	Not Available	521	Open in IMG/M
3300005365\|Ga0070688_100360332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1067	Open in IMG/M
3300005467\|Ga0070706_100089025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2862	Open in IMG/M
3300005518\|Ga0070699_102000136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	530	Open in IMG/M
3300005552\|Ga0066701_10544926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	713	Open in IMG/M
3300005610\|Ga0070763_10565242	Not Available	656	Open in IMG/M
3300005615\|Ga0070702_101130310	Not Available	627	Open in IMG/M
3300005713\|Ga0066905_100746122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	844	Open in IMG/M
3300005713\|Ga0066905_101210918	Not Available	675	Open in IMG/M
3300005713\|Ga0066905_101830514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	560	Open in IMG/M
3300005713\|Ga0066905_102144280	Not Available	520	Open in IMG/M
3300005764\|Ga0066903_101855387	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300005764\|Ga0066903_103599192	Not Available	834	Open in IMG/M
3300006038\|Ga0075365_10785406	Not Available	672	Open in IMG/M
3300006042\|Ga0075368_10380442	Not Available	618	Open in IMG/M
3300006057\|Ga0075026_100667869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	617	Open in IMG/M
3300006172\|Ga0075018_10703375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	546	Open in IMG/M
3300006176\|Ga0070765_100408322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1268	Open in IMG/M
3300006604\|Ga0074060_11921111	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300006845\|Ga0075421_102158422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300006871\|Ga0075434_101511080	Not Available	681	Open in IMG/M
3300006904\|Ga0075424_102803387	Not Available	508	Open in IMG/M
3300006954\|Ga0079219_11001726	Not Available	693	Open in IMG/M
3300009090\|Ga0099827_11077995	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300010043\|Ga0126380_11725985	Not Available	563	Open in IMG/M
3300010047\|Ga0126382_11754336	Not Available	582	Open in IMG/M
3300010321\|Ga0134067_10481541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300010366\|Ga0126379_12640788	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_103370898	Not Available	629	Open in IMG/M
3300010376\|Ga0126381_103523065	Not Available	614	Open in IMG/M
3300010397\|Ga0134124_11643319	Not Available	674	Open in IMG/M
3300012199\|Ga0137383_10377528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1039	Open in IMG/M
3300012906\|Ga0157295_10060547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300012948\|Ga0126375_10323557	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300012960\|Ga0164301_11757541	Not Available	520	Open in IMG/M
3300012985\|Ga0164308_11088806	Not Available	715	Open in IMG/M
3300012985\|Ga0164308_11354929	Not Available	648	Open in IMG/M
3300014325\|Ga0163163_12134730	Not Available	620	Open in IMG/M
3300014326\|Ga0157380_11271480	Not Available	782	Open in IMG/M
3300015374\|Ga0132255_104303344	Not Available	604	Open in IMG/M
3300016341\|Ga0182035_10203579	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300016341\|Ga0182035_12106370	Not Available	512	Open in IMG/M
3300016357\|Ga0182032_11012789	Not Available	710	Open in IMG/M
3300016371\|Ga0182034_11404774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	610	Open in IMG/M
3300016371\|Ga0182034_11900491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	525	Open in IMG/M
3300016404\|Ga0182037_11515948	Not Available	595	Open in IMG/M
3300016422\|Ga0182039_11242764	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300018028\|Ga0184608_10412294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300018469\|Ga0190270_10173808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1784	Open in IMG/M
3300018469\|Ga0190270_12686468	Not Available	560	Open in IMG/M
3300018476\|Ga0190274_10463497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300020002\|Ga0193730_1192578	Not Available	505	Open in IMG/M
3300021171\|Ga0210405_10260518	Not Available	1372	Open in IMG/M
3300021404\|Ga0210389_11201177	Not Available	584	Open in IMG/M
3300021479\|Ga0210410_11103887	Not Available	683	Open in IMG/M
3300022898\|Ga0247745_1080619	Not Available	545	Open in IMG/M
3300025915\|Ga0207693_11363726	Not Available	528	Open in IMG/M
3300025927\|Ga0207687_10530568	Not Available	985	Open in IMG/M
3300025934\|Ga0207686_10479463	Not Available	962	Open in IMG/M
3300025940\|Ga0207691_10575762	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300026555\|Ga0179593_1131846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3709	Open in IMG/M
3300027855\|Ga0209693_10441815	Not Available	626	Open in IMG/M
3300028720\|Ga0307317_10105544	Not Available	935	Open in IMG/M
3300028771\|Ga0307320_10060502	Not Available	1406	Open in IMG/M
3300028791\|Ga0307290_10258314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	638	Open in IMG/M
3300028799\|Ga0307284_10144425	Not Available	915	Open in IMG/M
3300028906\|Ga0308309_10968937	Not Available	737	Open in IMG/M
3300031057\|Ga0170834_104567321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300031545\|Ga0318541_10267433	Not Available	951	Open in IMG/M
3300031561\|Ga0318528_10366444	Not Available	773	Open in IMG/M
3300031573\|Ga0310915_10211994	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300031573\|Ga0310915_10307032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300031668\|Ga0318542_10447260	Not Available	669	Open in IMG/M
3300031679\|Ga0318561_10009986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4098	Open in IMG/M
3300031680\|Ga0318574_10043510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2334	Open in IMG/M
3300031681\|Ga0318572_10262810	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031681\|Ga0318572_10836071	Not Available	547	Open in IMG/M
3300031681\|Ga0318572_10944233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300031723\|Ga0318493_10069497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1714	Open in IMG/M
3300031736\|Ga0318501_10571467	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031764\|Ga0318535_10194386	Not Available	907	Open in IMG/M
3300031768\|Ga0318509_10701867	Not Available	561	Open in IMG/M
3300031771\|Ga0318546_10411444	Not Available	945	Open in IMG/M
3300031779\|Ga0318566_10517411	Not Available	584	Open in IMG/M
3300031781\|Ga0318547_10501493	Not Available	749	Open in IMG/M
3300031793\|Ga0318548_10628009	Not Available	522	Open in IMG/M
3300031821\|Ga0318567_10310689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300031832\|Ga0318499_10274598	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031833\|Ga0310917_10237337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300031854\|Ga0310904_10458410	Not Available	847	Open in IMG/M
3300031890\|Ga0306925_10270526	Not Available	1830	Open in IMG/M
3300031897\|Ga0318520_10448697	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300031897\|Ga0318520_10884421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	562	Open in IMG/M
3300031910\|Ga0306923_10155233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2613	Open in IMG/M
3300031910\|Ga0306923_10769983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300031912\|Ga0306921_10662692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1202	Open in IMG/M
3300031941\|Ga0310912_10645284	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300031946\|Ga0310910_10382545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1114	Open in IMG/M
3300032010\|Ga0318569_10250184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300032010\|Ga0318569_10373556	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032025\|Ga0318507_10254233	Not Available	762	Open in IMG/M
3300032025\|Ga0318507_10446769	Not Available	563	Open in IMG/M
3300032052\|Ga0318506_10146415	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300032055\|Ga0318575_10566384	Not Available	576	Open in IMG/M
3300032059\|Ga0318533_11377934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	515	Open in IMG/M
3300032060\|Ga0318505_10015572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2859	Open in IMG/M
3300032063\|Ga0318504_10662053	Not Available	502	Open in IMG/M
3300032065\|Ga0318513_10285955	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300032261\|Ga0306920_101256326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1067	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.17%
Host-Associated	Host-Associated	10.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.67%
Plants	Host-Associated → Plants	10.83%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.67%
Sediment	Environmental → Aquatic → Sediment	2.50%
Roots	Host-Associated → Plants → Roots	2.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.83%
Loam	Environmental → Terrestrial → Soil → Loam	15.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1004671763	3300000364	Soil	MLASLIFGLTSIANAEEAQQLTCTGMMIEPTAMSQSPETVVLTLGPAQKXTXDLGXGAVXARKVSDNKI
JGI1027J11758_125288671	3300000789	Soil	MLRTSMLASLIFGLTSIANAEEAQQLTCTGMMIETTAMSQSPETVVLTLGPAQXXTXDLGXGAVXARKVSDNKIQLKF
JGIcombinedJ26739_1005836011	3300002245	Forest Soil	MFRISILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVNARKVS
Ga0062591_1018068441	3300004643	Soil	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISESPKTVKLSLGPAHKISLDLGQG*
Ga0066388_1087578361	3300005332	Tropical Forest Soil	MFRTSILASIFGFASIAAFAEDTQQLTCSGMMIEPTVLSQSPETVILTLGPARKVTLD
Ga0008090_100635291	3300005363	Tropical Rainforest Soil	MFRRGIAVSLITAFSSIAAFAQDERQFTCTGTMIEPSAMSQSPETVVMTLGPGQKIALDLGKGVVNARR
Ga0070688_1003603322	3300005365	Switchgrass Rhizosphere	MPMEHLQISKGASMLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTIKLSLGPAHKVSLDLGQGV
Ga0070701_103846762	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLRASMLAPMVVGFTASVAVCAEGARQLTCEGTMIEPAAMSQTSETVKLTLGR
Ga0070706_1000890255	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MFRTNILALIFGFTSIAVFAEDARQLTCKGMMIEPNAMSLLTLGPAQKVTLDLGQGVVNARQVSDNRIQLKFRTKDFE
Ga0070699_1020001361	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSRTSIVASLIIAFSSIAAFAEEARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDL
Ga0066701_105449262	3300005552	Soil	MSRTSIVASLIIAFSSIAAFAEEARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVV
Ga0070763_105652421	3300005610	Soil	MFRISSLASLIFGFTSIAVFAEDARQLTCTGMMIEPSAMSQSPETVILTLGPARKVSLDLGRGVM
Ga0070702_1003441623	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLRASMLASMVVGFTASVAVCAEDARQLTCEGMMIEPTAMSQTPETVKLTLGR
Ga0070702_1011303101	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTIKLSLGPAHKVSLDLGQGVM
Ga0066905_1007461223	3300005713	Tropical Forest Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSLETVTLTVGPAQRERWTSVKAW*
Ga0066905_1012109182	3300005713	Tropical Forest Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVALDRGQGVVNARKVSDNKIQ
Ga0066905_1018305141	3300005713	Tropical Forest Soil	MFRTSIMALLIVAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKG
Ga0066905_1021442802	3300005713	Tropical Forest Soil	MFRTSILALIFGFTSITAFAEDALQLTCNGTMIEPNAMSQSPETVTLTLGPAQKV
Ga0066903_1018553871	3300005764	Tropical Forest Soil	MAFFSIAAFAENARQFTCSGTMIEPSAISPSPETVVLTLGPAQK
Ga0066903_1035991922	3300005764	Tropical Forest Soil	MFQTSIMAPLIVTFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVMNARRVSDNK
Ga0075365_107854061	3300006038	Populus Endosphere	MFRISTMAVLIVAFFSIAALAHDARQFTCSGTMIEPTALSSSPATLVMTLEPGQKITLELSQDDVLNARGLSDNKIQLKFR
Ga0075368_103804421	3300006042	Populus Endosphere	MLRASMLASMVVGFTASVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQKVTLDLGQGAISARVLS
Ga0075026_1006678691	3300006057	Watersheds	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVNARKVSDNKIQLK
Ga0075018_107033751	3300006172	Watersheds	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIEPSSMSRSPETAILTLGPAQKLTLDLGQGAVNARKVSDNKIQLKFR
Ga0070765_1004083221	3300006176	Soil	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILILGPAQKLTLDLGQGAVNARKVSDNKIQLKFRT
Ga0074060_119211112	3300006604	Soil	LAQEIDWGAAAMFRTGILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVNARK
Ga0075421_1021584221	3300006845	Populus Rhizosphere	MLRTGMLASLIFGFISVAVSAEEAQQLMCTGMMIEPSAMSQSPETVTLTLGPAQKITLDLGQGAVNARRVSDNKIQLK
Ga0075434_1015110802	3300006871	Populus Rhizosphere	MFRARILAPLILCFTSVAVFAEDARQFTCSGTMIEPSGLTQSPETVILTLGPARKIMLELGRGVMSARL
Ga0075424_1028033873	3300006904	Populus Rhizosphere	MFRARILAPLILCFTSVAVFAEDARQFTCSGTMIEPSGLTQSPETVILTLGPARKIMLELGRGVMSA
Ga0079219_110017263	3300006954	Agricultural Soil	MFRISTMAVLIVAFFSIAALAHDARQFTCSGTMIEPTALSSSPATLVMTLEPGQKITLELSQ
Ga0099827_110779952	3300009090	Vadose Zone Soil	MFRTSILALIFGFTSIAVFAEDARQLTCKGMMIEPNAMSQSPETVILTLGPAQKVTLDLGQGVVNARQVSENRIQLKF
Ga0126380_117259852	3300010043	Tropical Forest Soil	MLALIFGFASITVSAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVALDLGQGV
Ga0126382_117543361	3300010047	Tropical Forest Soil	MFRTSISALIFGLTSITVFAEDARQLTCNGAMIEPNAMSQSPETVTLTLGPAQKVTLDLGQGVVNARK
Ga0134067_104815411	3300010321	Grasslands Soil	MALLIIAFSIAAFAQDARQFTCSGTMIEPSAMSSSPETIGLTLGPAQKVTLDLGQGVVNARRVSDNKIQLK
Ga0126379_126407881	3300010366	Tropical Forest Soil	MASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLTLGPAQKVTLDLGQGVVNARKTKSN*
Ga0126381_1033708981	3300010376	Tropical Forest Soil	MFRTSILALIFGFTSIGVFAEDARQLTCSGTMIEPTAMSQSPETVILTLGPAQKVTL
Ga0126381_1035230651	3300010376	Tropical Forest Soil	MALLIVAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVMNARRVS
Ga0134124_116433192	3300010397	Terrestrial Soil	MLRASMLAPMVVGFTASVAVCAEDARQLTCEGMMIEPTAMSQTPETVKLTLGRAQKVTL
Ga0137383_103775283	3300012199	Vadose Zone Soil	MASLIIAFFSIATFAENARQFTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVVNARRVSDKSN*
Ga0157295_100605473	3300012906	Soil	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPETIKLSLGPAHKVSLDLGQGV
Ga0157301_100666771	3300012911	Soil	MLRASMFAPMVVGFTTSVAVCAEDARQLTCEGTMIEPVATSQTTETVKL
Ga0126375_103235572	3300012948	Tropical Forest Soil	MVIAFFSIVAFAEDARQFTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVMNARRVSD
Ga0164301_117575412	3300012960	Soil	MFRISILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVNARK
Ga0164308_110888062	3300012985	Soil	MLRISVLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTVKLNLGPAHKVSLDLVSQ
Ga0164308_113549292	3300012985	Soil	MFAPMVVGFTTSVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQKVTLDLGQGAISARVLSNNKIQ
Ga0164305_103399611	3300012989	Soil	MLRASMLASMVVGFTASVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQK
Ga0163163_121347302	3300014325	Switchgrass Rhizosphere	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTIKLSLGPAHKVSLDLGQGVMSARVVSDNKIQL
Ga0157380_112714801	3300014326	Switchgrass Rhizosphere	MLRASMFAPMVVGFTTSVAVCAEDARQLTCEGTMIEPAATSQTTKTVKLTLGRAQKVT
Ga0132258_128996122	3300015371	Arabidopsis Rhizosphere	MLRASMLASMVVGFTASVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGERRRSPSISARARSALAS*
Ga0132255_1043033441	3300015374	Arabidopsis Rhizosphere	MFRTSIFASLLALSSSIAAFAEDALQFPCTGTMIEPSAMSPSPETVVMTLGPAQKITLDLGKGVVIARRLSDNKI
Ga0182035_102035794	3300016341	Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVAL
Ga0182035_121063701	3300016341	Soil	MFQTSIMASLIIAFFSIPAFAEDARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGKGVVNARR
Ga0182032_110127891	3300016357	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLGPAQKVALDLG
Ga0182034_114047742	3300016371	Soil	MITASSNIAVLAEEARQLNCSGTMIEPSAMSPFPETVVLTLGPAQKIALDLGMPAG
Ga0182034_119004912	3300016371	Soil	MFRTSMLALIFGFRGIVVFAEDARQLTCSGMMIEPNAMSQSPETVMLTLGPAHKVTL
Ga0182037_115159481	3300016404	Soil	MFRTSMLALIFGFTSIVVFAEDARQVTCSGMMIEPNAMSQSPETVMLTLGPAHKVTL
Ga0182039_112427641	3300016422	Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVA
Ga0184608_104122941	3300018028	Groundwater Sediment	TSILASLIFGFTGIAVFAEDARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVLDLGKGMVNARKVSDTKSN
Ga0190270_101738084	3300018469	Soil	MLRISVLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTVKLSLGPAQISCSP
Ga0190270_126864682	3300018469	Soil	MLRASMLAPMVIGFTTSVAICAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQKVTLD
Ga0190274_104634973	3300018476	Soil	MLRISVLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTVKLSLGPAHKVSLDLGQGVMSARVV
Ga0193730_11925781	3300020002	Soil	MMFRTIMLVPMIIGCTTITVRAGDPRQMTCTGTMIEPSAISQSPKTVNLNLGPAHKVTLDLGQGTMTTRVVS
Ga0210405_102605183	3300021171	Soil	MFRISILALIFGFASIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKL
Ga0210389_112011771	3300021404	Soil	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIESSAMSRSPETVILTLGPAQKLTLDLGQGAVNARKVSDNKIQLK
Ga0210410_111038873	3300021479	Soil	MFRISILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVDARKVS
Ga0247745_10806191	3300022898	Soil	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTIKLSLGPAHK
Ga0207693_113637261	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MFRISSLASLIFGFTSIAVFAEDARQLTCTGMMIEPSAMSQSPETVILTLGPARKVSLDLGRGVMNGRLA
Ga0207687_105305681	3300025927	Miscanthus Rhizosphere	MLRISVLAPMIFSFTTVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQKVTLDLGQGAISARVLSNNKI
Ga0207690_102036193	3300025932	Corn Rhizosphere	MLRASMLASMVVGFTASVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGERRRSP
Ga0207686_104794631	3300025934	Miscanthus Rhizosphere	MLRASMLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTIKLSLGPAHKVSLDLGQGV
Ga0207691_105757621	3300025940	Miscanthus Rhizosphere	MLRASMLAPMIFGFTTVAVCAEDARQLTCEGTMFEPAATSQTTETVKLTLGRAQKVTLDLGEGAIS
Ga0179593_11318465	3300026555	Vadose Zone Soil	MFRTIMLVPMIIGCTTITVRAEDARQMTCPGTMIEPSAISQSPKTVNLNLGPAHKVTLDLGQGTMTTRVVSDNKISAKVQDERL
Ga0209693_104418151	3300027855	Soil	MFRISSLASLIFGFTSIAVFAEDARQLTCTGMMIEPSAMSQSPETVILTLGPARKVSLDLGRGVMNG
Ga0307317_101055441	3300028720	Soil	MLRISVLAPMIFGFTTVAVCAEDARQLTCDGSMIEPAAISQSPKTVKLSLGPAHKVSLDLGQGVMSARVVS
Ga0307320_100605021	3300028771	Soil	MFRTIMLMPMILGFTTIAVCAEDARQMTCAGTMIEPSAISQSPKTVSLNLGPAHKITL
Ga0307290_102583142	3300028791	Soil	MLRTGMLASLIFGFISVAVSAEEAQQLMCTGMMIEPSAMSQSPETVTLTLGPAQKITLDLGQGAYRRPVLH
Ga0307284_101444253	3300028799	Soil	MLRASMLAPMVIGFTTSVAICAEDARQLTCEGTMIEPAAMSQTPETV
Ga0308309_109689371	3300028906	Soil	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILILGPAQKLTLDLGQGAVNARKVSDNK
Ga0170834_1045673212	3300031057	Forest Soil	MFRIGILALIFGFTSIAVFAEDARQLTCSGTMIEPSAMSRSPETVILTLGPAQKLTLDLGQGAVNAVK
Ga0318541_102674331	3300031545	Soil	MFRTSILALIFGFTSITAFAEDARQLTCSGTMIEPSAMSQSPETVILTLGPAQKVTWP
Ga0318528_103664442	3300031561	Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLTLGPAQKVT
Ga0310915_102119943	3300031573	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLGPAQKIALDLGQGV
Ga0310915_103070321	3300031573	Soil	MFRTSMLVLIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVT
Ga0318542_104472602	3300031668	Soil	MFRTSILALIFGFTSVGVFAEDARQLTCSGTMIEPTAMSQSPETVILTLGPAQK
Ga0318561_100099865	3300031679	Soil	MASLIIAFFSIAAFAENARQFTCSGTMIEPSAIFPSPETVVLTLGPAQKVTLD
Ga0318574_100435105	3300031680	Soil	MASLIIAFFSIAAFTENARQFTCSGTMIEPSAIFPSPETVVLTLGPAQKVTLD
Ga0318572_102628102	3300031681	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLGPAQKVALDLGQGVVNARK
Ga0318572_108360712	3300031681	Soil	MFRTSITASLVIAFFSIVALAEDARQFTCSGTMIEPSAMSASPETVVLTLGPAQKVTLDLGKGVMNA
Ga0318572_109442332	3300031681	Soil	VLIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVNAPVR
Ga0318493_100694971	3300031723	Soil	MFRTSIMASLIIAFFSIAAFAENARQFTCSGTMIEPSAIFPSPETVVLTLGPAQKVTLDLGKGVMNARR
Ga0318501_105714671	3300031736	Soil	MFRTSITASLVIAFFSIVALAEDARQFTCSGTMIEPSAMSASPETVVLTLGPAQKVTLD
Ga0318535_101943861	3300031764	Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLALGPAQKVTLDL
Ga0318509_107018671	3300031768	Soil	MFRTSILALIFGFTSVGVFAEDARQLTCSGTMIEPTAMSQSPETVILTLGPAQKVTLDLGNGV
Ga0318546_104114441	3300031771	Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLTLGPAQKVTLDLGQGVVNARKV
Ga0318566_105174112	3300031779	Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLTLGPAQKVTLDLGQGVVNARK
Ga0318547_105014932	3300031781	Soil	MFRTSILALIFGFTSITAFAEDARQLTCSGTMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVKASKVSDN
Ga0318548_106280091	3300031793	Soil	MFRTSMLALIFGFTSIVVFAEDARQVTCSGMMIEPNAMSQSPETVMLTLGPAHKVTLDLGQG
Ga0318567_103106892	3300031821	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVN
Ga0318499_102745981	3300031832	Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVALERGQGVVNARK
Ga0310917_102373372	3300031833	Soil	MFRTSMLVLIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVNAPVR
Ga0310904_104584101	3300031854	Soil	MLRASMLASMVVGFTASVAVCAEDARQLTCEGTMIEPAAMSQTPETVKLTLGRAQKVTLDLGQGAISARVLSNNKIQLK
Ga0306925_102705261	3300031890	Soil	MFRTSILALIFGFTSITAFAEDARQLTCSGTMIEPSAMSQSPETVILTLGPAQKVTLDLG
Ga0318520_104486972	3300031897	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLGPAQKIALDLGQGVV
Ga0318520_108844211	3300031897	Soil	MSRTSIVASLIIAFSSIAAFAEEARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVTLDLGDGVVNARRVSDNKVQLRFR
Ga0306923_101552334	3300031910	Soil	MFRTSMLALIFGFRGIVVFAEDARQLTCSGMMIEPNAMSQSPETVMLTLGPAHKVTLDL
Ga0306923_107699832	3300031910	Soil	MFRTSMLVLIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTL
Ga0306921_106626922	3300031912	Soil	MITASSNIAVLAEEARQLNCSGTMIEPSAMSPSPETVVLTLGPAQKIALDLGMPAG
Ga0310912_106452841	3300031941	Soil	MFQTSIMASLIIAFFSIPAFAEDARQLTCSGTMIEPSAMSPSPETVVLTLGPAQKVMLDLGKGVVNARRVSDN
Ga0310910_103825451	3300031946	Soil	MFRTSMLALIFGFRGIVVFAEDARQLTCSGMMIEPNAMSQSPETVMLTLGPAHKVTLDLGQGVVNARQVSDNKIQLKFK
Ga0318569_102501843	3300032010	Soil	FTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVNAPVR
Ga0318569_103735561	3300032010	Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVALERGQG
Ga0318507_102542331	3300032025	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLGPAQKIALDLGQGVVN
Ga0318507_104467691	3300032025	Soil	MFRTSILALIFGFTSITAFAEDARQLTCSGTMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVNARKVSDNKIQ
Ga0318506_101464151	3300032052	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPGAMSQSPETVILTLWPAQKVALDLGQGVV
Ga0318575_105663841	3300032055	Soil	MFRTSIMASLIIAFFSIAAFAEDARQFTCSGTMIEPSAMSPSPETVTLALGPAQKVTLDLGQ
Ga0318533_113779343	3300032059	Soil	SMITASSNIAVLAEEARQLNCSGTMIEPSAMSPSPETVVLTLGPAQKIALDLGMPAG
Ga0318505_100155723	3300032060	Soil	MFRTSILALIFGFTSITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVTLDLGQGVVNAPVR
Ga0318504_106620531	3300032063	Soil	MFRTSILALIFGFTSVGVFAEDARQLTCSGTMIEPTAMSQSPETVILTLGPAQKVTLDLGNGVGNARKVS
Ga0318513_102859551	3300032065	Soil	MFRTSILALIFGFASITVFAEDARQLTCSGMMIEPSAMSQSPETVILTLGPAQKVALDLGQGVVNA
Ga0306920_1012563261	3300032261	Soil	SNIAVLAEEARQLNCSGTMIEPSAMSPFPETVVLTLGPAQKIALDLGMPAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073956

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences