Metagenome / Metatranscriptome Family F073946

Basic Information
Family ID	F073946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	74 residues
Representative Sequence	RDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Number of Associated Samples	106
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.17 %
% of genes from short scaffolds (< 2000 bps)	0.83 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Unclassified (96.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.36% β-sheet: 0.00% Coil/Unstructured: 54.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF12840	HTH_20	4.17
PF08327	AHSA1	1.67
PF00589	Phage_integrase	1.67
PF13641	Glyco_tranf_2_3	1.67
PF13495	Phage_int_SAM_4	1.67
PF04014	MazE_antitoxin	0.83
PF08240	ADH_N	0.83
PF04012	PspA_IM30	0.83
PF06723	MreB_Mbl	0.83
PF09723	Zn-ribbon_8	0.83
PF13229	Beta_helix	0.83
PF02321	OEP	0.83
PF13883	Pyrid_oxidase_2	0.83
PF01120	Alpha_L_fucos	0.83
PF13517	FG-GAP_3	0.83
PF01850	PIN	0.83
PF00005	ABC_tran	0.83
PF02368	Big_2	0.83
PF05199	GMC_oxred_C	0.83
PF04542	Sigma70_r2	0.83
PF03948	Ribosomal_L9_C	0.83
PF10615	DUF2470	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.67
COG1842	Phage shock protein A	Transcription [K]	1.67
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.83
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
All Organisms	root	All Organisms	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
cellular organisms	root	All Organisms → cellular organisms	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1019569	Not Available	735	Open in IMG/M
3300005574\|Ga0066694_10025047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2648	Open in IMG/M
3300006031\|Ga0066651_10000939	All Organisms → cellular organisms → Bacteria	9579	Open in IMG/M
3300006173\|Ga0070716_100022334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3343	Open in IMG/M
3300020581\|Ga0210399_10028292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4473	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.67%
Host-Associated	Host-Associated	3.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Aquatic	Environmental → Aquatic	9.17%
Plants	Host-Associated → Plants	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.83%
Peat	Environmental → Terrestrial → Peat	6.67%
Freshwater	Environmental → Aquatic → Freshwater	5.00%
Sediment	Environmental → Aquatic → Sediment	3.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.67%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.00%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028639	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_2	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03096000	2199352024	Soil	MRRRLRSFSLGRRVDHRTRDISLDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADAVRTFGEPLPKGLELE
JGI12649J13570_10195691	3300001175	Forest Soil	DIPEHVLRRAIAKLTSAGVSDQTASRPLEEYVVPDRAHVVRTFGETLPKGMELESSASCLSTVTALNS*
JGI26340J50214_101479211	3300003368	Bog Forest Soil	LRELTHETASAILQLGRRVEDRTRDIRPDLARSAIAKLKSAKVADDAMLRPLQEYVAPVRADVVRTFGEPLPKGLELESTANCLSPVTALRV*
JGI24140J50213_100981541	3300003369	Arctic Peat Soil	ETASAVVQMGRRVDHRTRDISQDVARSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0066672_107531341	3300005167	Soil	LRELTHETASAVVQLGRRVDHRTRDISQDVVRSAIAGLKSAGLADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0066680_103341762	3300005174	Soil	MTRTVELHDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066673_104050361	3300005175	Soil	AADWITALLDLRELTHETASAVVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066673_107650081	3300005175	Soil	TAADWITALLDLRELTHETASAVVQMGRRVEHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0066690_109742272	3300005177	Soil	PLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066684_101886871	3300005179	Soil	ALLDLRELTHETASAVVQMGRRVEHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0066388_1054700361	3300005332	Tropical Forest Soil	RVDDRTRDISQDVVRSVIAGLKSAGVGDDTFLRPLQEYIAPVRADVVRTFGEPLPKGLELESTAHCLSPVTGLTS*
Ga0070711_1018178251	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0066689_104774262	3300005447	Soil	TRDISQDVVRSAIAGLKSAGLADDIFLRPLHEYIAPVRADVSFGEPLPKGMELESTANCLSSVAALTS*
Ga0066695_108057442	3300005553	Soil	VADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS*
Ga0066692_107499381	3300005555	Soil	MTSRTASAVVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066693_101966751	3300005566	Soil	VVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066694_100250475	3300005574	Soil	HRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066691_102988922	3300005586	Soil	DLRELTHETVSAVIQMGRRVDHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0066903_1005063461	3300005764	Tropical Forest Soil	LESSEITHETAAAVVQLGRRVDDRARDISQDVTRFAVSKLKSAGAADNAFLCPLQEYIVPTRVEVVRTLGDSLPVGMELESTSRCLSPVIALTS*
Ga0066903_1032535861	3300005764	Tropical Forest Soil	QLGGDTVRKLTTAGVADDVFLRPLVEFTMPVRGDVARTFGEPLPKGLELESTATCLSPVTALAS*
Ga0070717_103697281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ASVADDIFLRPLHEYIAPVRADVARTFGEPLPKDLELESTANCLSSVTALTS*
Ga0066651_1000093912	3300006031	Soil	ETASAVVQLGRRVDHRTRDISQDVVRSASARLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS*
Ga0075029_1000027134	3300006052	Watersheds	VVRSAIAELKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0075015_1005390782	3300006102	Watersheds	VRSAIAELKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKSLELESTANCLSSVTAL
Ga0070716_1000223341	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RRVDHRTRDISQDVVRSVVARLKSAGVADDILLRPLHEYIAPVSADVARTFGEALPKGLELESTANCLSSVAALT*
Ga0070716_1016390061	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DHSRDISPEVIRSAIARLKSAGIADDTFLRPLVEFTLPVRDDVVRTFGEPLPKGLKLESTANCLSPMTALAS*
Ga0070712_1019333412	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS*
Ga0075521_100119701	3300006642	Arctic Peat Soil	PLLEYVAPGRPDVVRTFGEPLPKGLELESTANCLSPVTALTT*
Ga0075521_101460453	3300006642	Arctic Peat Soil	DDALLRPLQEYVAPVRADVVRTFGEPLPKGLELDSTANCLSPVTALTA*
Ga0066658_108206562	3300006794	Soil	LRPLLDFDLPVRDDVARTFGESLPKGLQLESTANCLSPVTALAS*
Ga0126380_116573111	3300010043	Tropical Forest Soil	ALLDSPRLTHETAAAVVQLGRRVDDRARDIGRDVTLAAVSRLKSAAAADDAFLRPLEESTAPAHSDVVRALGEPLPRGMELESTSKCLSPVAALIS*
Ga0126373_109123591	3300010048	Tropical Forest Soil	ETAAAVVQLGRRVDDRARDISQAVTRFAVSKLKSAGVANDAFLRPLQEYIVPTRLDVVRTLGESLPAGMELQSTSRCLSPVVALTS*
Ga0126373_127558761	3300010048	Tropical Forest Soil	SAVVQLGRWVDDRTRDISQDVVRSAIAGLKSAGVADDTFLRPLHEYIAPARADVVRTFGEPLPKGLELESTADCLSPVTALTS*
Ga0126373_129563031	3300010048	Tropical Forest Soil	AGVADDTFLRPLQEYIVPVRSDVVRTFGEPLPKGLELESTANCLSPVTALTS*
Ga0134070_104198691	3300010301	Grasslands Soil	SAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0134065_102614352	3300010326	Grasslands Soil	VMTRTVELHDHRTRDIGRDMVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0134080_100768581	3300010333	Grasslands Soil	RRFVMTRTVELHDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYTAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0074045_100906583	3300010341	Bog Forest Soil	RTRDISSEVARSAFSKLKSAGVVDDTFLRPLQEYIAPVRADVVRTFGEPLPRGLELESTANCLSPVTALTS*
Ga0126372_118840541	3300010360	Tropical Forest Soil	RDISPEVIRSAVARLKSAGVADDASLRPLLEFTLPVRDDVERTFGEPLPRGLKLESTANCLSPVTALAS*
Ga0126378_114928222	3300010361	Tropical Forest Soil	PLLEFTLPVRDDVERTFGEPLPRGLKLESTANCLSPVSALAS*
Ga0126377_120545451	3300010362	Tropical Forest Soil	VRSAIAGLKSAGVADDTFLRPLHEYIAPARADVVRTFGEPLPKGLELESTANCLSPVTALTS*
Ga0126379_100310911	3300010366	Tropical Forest Soil	QEVVRSAIARLKSAGVADDTFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0126379_104606851	3300010366	Tropical Forest Soil	SAADWIIALLELRELTHETASAILQLGRRVDQRSRDISQDVVRSVIAGLKSAGVGDDTFLRPLQEYIAPVRADVVRTFGEPLPKGLELESTAHCLSPVTALTS*
Ga0126379_121021441	3300010366	Tropical Forest Soil	TAADWITALLDLRELTNETASAVVQLGRWVDDRTRDISQDVVRSAIAGLKSAGAADDTFLRPLHEYIAPARADVVRTFGEPLPEGLELESTADCLSPVTALTS*
Ga0126379_132383323	3300010366	Tropical Forest Soil	RVEDRARDISHDVALSAVSKLKSAAAADDAFLRPLREYIAPTHADVVYTLGERLPIGLELESTSKCLSPVGALIS*
Ga0126381_1001022431	3300010376	Tropical Forest Soil	ADDTFLRPLHEYIAPARADVVRTFGEPLPKGLELESTADCLSPVTALTS*
Ga0126381_1002108083	3300010376	Tropical Forest Soil	ALAKLKVAGVADAFLRPLLEFTMPGRDDVARTFGEPLPKGLELESSANCLSSVTALAF*
Ga0126383_114335581	3300010398	Tropical Forest Soil	VRSVIAGLKSAGVADNTFLRPLQEYIAPARADVVRTFGEPLPKGLELESTGDCLSPVTALTS*
Ga0150983_159332351	3300011120	Forest Soil	GELTHETASAVLQLGRRVEDRTRDISQDVVRSTIRTLKSAGVADDIFLRPLHEYVAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTRSR*
Ga0137388_114174101	3300012189	Vadose Zone Soil	ISQDVVRSAIAGLKSARVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0137399_105515741	3300012203	Vadose Zone Soil	IFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0137381_116489511	3300012207	Vadose Zone Soil	PAETAADWITALLDLRELTHETASAVVQLGRRVDHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALT*
Ga0137377_118580051	3300012211	Vadose Zone Soil	HRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0137367_110090322	3300012353	Vadose Zone Soil	GLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS*
Ga0137385_114099301	3300012359	Vadose Zone Soil	GRRVDHRTRDISQDVLRSAVAGLKSAGVADDIFLRPLHEYIAPVRADVARTFGEPLPKGLELESTANCLSSVAALT*
Ga0137361_116644081	3300012362	Vadose Zone Soil	YIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0137416_111209961	3300012927	Vadose Zone Soil	GVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSVNALTS*
Ga0164298_115942852	3300012955	Soil	DDILLRPLHEYIAPVSADVARTFGEALPKGLELESTANCLSSVAALT*
Ga0164302_106908782	3300012961	Soil	SAVVQLGRRVDHRTRDISQDVVRSVVARLKSAGVADDILLRPLHEYIAPVSADVARTFGEALPKGLELESTANCLSSVAALT*
Ga0134076_100990453	3300012976	Grasslands Soil	ASAVVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVAEDIFLRPLQEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS*
Ga0157369_116872831	3300013105	Corn Rhizosphere	AVVQLGRRVDDRTRDISQVVVRSAIAGLKSAGVGDDTSLRPLHEYIAPVRADVVRTFGEPLPKGLELESTAHCLSPVTALTS*
Ga0157378_116389662	3300013297	Miscanthus Rhizosphere	KSAGVADDILLRPLHEYIAPVSADVARTFGEALPKGLELESTANCLSSVAALT*
Ga0134079_103871831	3300014166	Grasslands Soil	HETASAVVQLGRRVDHRTRDISQDVVRSAIAGLKSARVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSVAALTS*
Ga0182015_103623051	3300014495	Palsa	IFLRPLQEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS*
Ga0182008_103542872	3300014497	Rhizosphere	DRTRDISQVVVRSAIAGLKSAGVGDDTSLRPLHEYIAPVRADVVRTFGEPLPKGLELESTAHCLSPVTALTS*
Ga0182024_110865591	3300014501	Permafrost	TALLDLRELTHETASAVVQMGRRVDHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVARTFGEPLPKGLELESTANCLSSVTALTS*
Ga0182024_116226982	3300014501	Permafrost	RELTHETASAVVQMGRRVDHRTRDISQNVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVHTFGEPLPKGLELESTVNCLSSVTALTS*
Ga0134073_101132331	3300015356	Grasslands Soil	AADWITALLDLRELTHETASAVVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPVRADVSFGEPLPKGMELESTANCLSSITALTS*
Ga0182035_114540671	3300016341	Soil	THETTSAIVLLGRRVDDRTRDISPGVMRSAIVKLKSAGVADDAFLRPLLDFNLPVRDDVARTFGEPLPKGLELASTANCLSPVTALAS
Ga0182037_106058382	3300016404	Soil	LLDSSEITCETAAAVVQLGRRVDDRARDISQDVTRFAVSKLKSAGVADDAFLRPLQEYIVPTRLDVVHTLGDFLPVGLELESTSRCLSPVVALTS
Ga0182039_118629312	3300016422	Soil	LDLRELTHETTSAIVLLGRRVDDRTRDISPEVIRSAIVKLKSAGVADDAFWRPLLDFNLPVRDDVARTFGEPLPKGLELESTSNCLSPVTALAS
Ga0182038_106348222	3300016445	Soil	WITTLLDLGELTHETASAVVQLGRRVDHRTRDVSQDVVRSAIARLKSAGVADDDFLRPLRESISPVRADVVRTFGEPLPKGLELESTVNCLSSVTALTS
Ga0187801_101691732	3300017933	Freshwater Sediment	ADDAFLRPLQEYIVPVRADVVRTFGEPLPKGLELESTANCLSPVTALTS
Ga0187879_102975071	3300017946	Peatland	IVQLGRRVDDPARDISPDVLRSAIAALKPAGVADDTFLRPMYEYVAPARADVLRTFGEPLPKGLELESTANCLSPVTALAS
Ga0187816_103513572	3300017995	Freshwater Sediment	LLDLRELTHETASAVVQLGRRVDHRTRDISQDVARSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0187804_102840681	3300018006	Freshwater Sediment	HETASAVVQLGRRVDHRTRDISQDVVRSAIARLKSAGVADDIFLWPLREYTSPVRADVVRTFGELLPKGLELESTANCLSSVTALTS
Ga0066662_104893072	3300018468	Grasslands Soil	RSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALT
Ga0137408_10636923	3300019789	Vadose Zone Soil	ITALLALRELTHETASAVVQLGRRVDHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS
Ga0210407_102940224	3300020579	Soil	SQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANSLSSVTALTS
Ga0210407_108010881	3300020579	Soil	YIVPGRADVVRTFGETLPKGMELESTANCLFSVTALTS
Ga0210403_100807581	3300020580	Soil	QRARAKLKSAGVSDETVSRPLEEYIVPGRADVVRTFGETLPKGMELESTANCLFSVTALT
Ga0210399_100282921	3300020581	Soil	RDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0210401_101857181	3300020583	Soil	AAVLQLGRKVNDRTRDIPQDVLQRARAKLKSAGVSDETVSRPLEEYIVPGRADVVRTFGETLPKGMELESTANCLFSVTALTS
Ga0210388_113769772	3300021181	Soil	VDHRSRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0210386_111563861	3300021406	Soil	TALLELPELTHETASAVVQLGRRVEHRTRDITQDVVQSAIAALKSAGAADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Ga0242662_102405681	3300022533	Soil	AETAADWITTLLGVRELTHETASAVVQLGRRVDHRSRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0212123_102004553	3300022557	Iron-Sulfur Acid Spring	THETAAAVLQLGRKVNDRTRDIPQDVLQRARAKLKSAGVSDETVSRPLEEYIVPGRADVVRTFGETLPKGMELESTANCLFSVTALTS
Ga0137417_10543992	3300024330	Vadose Zone Soil	IFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVNALTS
Ga0208850_10652661	3300025457	Arctic Peat Soil	ELTHETASAVVQMGRRVDHRTRDISQDVARSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Ga0208850_10734812	3300025457	Arctic Peat Soil	RKVEDRARDIGPDVVRSAVAKLKSAKIADDALLRPLQEFVAPTRADVVRTFGEPLPKGLELDSTANCLSPVTALTA
Ga0208714_10555022	3300025527	Arctic Peat Soil	DVARSAVAKLKGAKIADDALMRPLLEYVAPGRPDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0207930_10135884	3300025604	Arctic Peat Soil	MKPPAPPVRLLRELRELTPETASAILQLGRKVEDRARDIGPDVVRSAVAKLKSAKIADDALMRPLLEYVAPGRPDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0209584_100497493	3300025878	Arctic Peat Soil	RELTHETASAILQLGRRVEDRTRDIGPEMAQLATAKLKSAKVADEALLRPLQEYTAPVRADVVRTFGEPMPKGLELESTANCLSPVTALTA
Ga0209236_12281412	3300026298	Grasslands Soil	MTRTVELHDHRTRDIGREVVRSAIAELTSAGVADDIFLRPLQEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS
Ga0209470_11263632	3300026324	Soil	MTRTVELHDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS
Ga0209159_11233942	3300026343	Soil	LRELTHETASAVVQLGRRVDHRTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS
Ga0209157_10392623	3300026537	Soil	RTRDIGRDVVRSAIAELTSAGVADDIFLRPLHEYIAPGRADVVRTFGEPLPKGLELESTANCLSSITALTS
Ga0209799_11256591	3300027654	Tropical Forest Soil	TAADWITALLDLRELTNETASAVVQLGRWVDDRTRDISQDVVRSAIAGLKSAGAADDTFLRPLHEYIAPARADVVRTFGEPLPEGLELESTADCLSPVTALTS
Ga0209736_11514362	3300027660	Forest Soil	ASAKLKSAGVSDATVSRPLEEYIVPGRADVVRTFGETLPKGMELESTANCLFSVTALTS
Ga0209656_102954082	3300027812	Bog Forest Soil	TRLTAFGIADDSVLQRLGKFMTPDRGDVARTFGEPLPKGLHLESTANCLSPVTALTSES
Ga0209624_108158391	3300027895	Forest Soil	DITQDVVQSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Ga0209067_100040844	3300027898	Watersheds	VRSAIAELKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Ga0209067_100190547	3300027898	Watersheds	LHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVSALTS
Ga0302168_10532852	3300028639	Fen	LRTAVTKLNAAEVADDVLLLPLQEYVAPGRSDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0302258_10907271	3300028770	Fen	TKLNAAEVADDVLLLPLQEYVAPGRSDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0311332_108717993	3300029984	Fen	LQEYVAPGRSDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0302175_101801331	3300030014	Fen	AILQLGRRVEDRTRDVDPDVLRTAVTKLNAAEVADDVLLLPLQEYVAPGRSDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0311335_102450161	3300030838	Fen	AALLDLRELTHETASAILQLGRRVEDRTRDVDPDVLRTAVTKLNAAEVADDVLLLPLQEYVAPGRSDVVRTFGEPLPKGLELESTANCLSPVTALTT
Ga0302323_1003068733	3300031232	Fen	DRTRDVDPDVLRTAVTKLNAAEVADDVLLLPLQEYVAPGRADVVRTFGEPLPKGLELESTSNCLSPVSALTV
Ga0170820_119662871	3300031446	Forest Soil	VRSAIAGLKSAGVADDIFLRPLHEYIAPGRADVVLTFGEPLPKGLELESTANCLSSVAALTS
Ga0170818_1102283241	3300031474	Forest Soil	RLKSAGVANDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAGLTA
Ga0265314_105205331	3300031711	Rhizosphere	QDVARSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS
Ga0307477_100367146	3300031753	Hardwood Forest Soil	LKSARVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0318548_105194131	3300031793	Soil	VEDRARDISPDVTQSAIRRLKSAEVADDALRRPLQQYVAPSRSDVARTFGEPLPKGLELESTANCLSPVAALTS
Ga0306921_112827762	3300031912	Soil	AETAAGWISALLDSSEITCETAAAVVQLGRRVDDRARDISQDVTRFAVSKLKSAGVADDAFLRPLQEYIVPTRLDVVHTLGDFLPVGLELESTSRCLSPVVALTS
Ga0307479_102891171	3300031962	Hardwood Forest Soil	LTHQTASAVVELGRRVDHRTRDISRDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVAALTS
Ga0335077_122286321	3300033158	Soil	AAKLKAAGVADDGGLRPLQEYVAPVRADVVRTFGELLPKGLELESTANCLSPVTALT
Ga0326726_116020901	3300033433	Peat Soil	SRDVVRSTMARLKSAGVADDTFLQPLQEYVVPVRADVVRTFGEPLPKGLELESTANCLSPVTALTS
Ga0334792_035351_113_349	3300033888	Soil	MGRRVDHRTRDISQDVVRSAIAGLKSAGVADDIFLRPLHEYIAPVRADVARTFGEPLPKGLELESTANCLSSVTALTS
Ga0370484_0031365_180_416	3300034125	Untreated Peat Soil	MGRRVDHRTRDISQDVARSAIAGLKSAGVADDIFLRPLHEYIAPVRADVVRTFGEPLPKGLELESTANCLSSVTALTS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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