NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F073942

Metagenome / Metatranscriptome Family F073942

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073942
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 66 residues
Representative Sequence MSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPA
Number of Associated Samples 107
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 13.33 %
% of genes near scaffold ends (potentially truncated) 98.33 %
% of genes from short scaffolds (< 2000 bps) 90.00 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (75.833 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.833 % of family members)
Environment Ontology (ENVO) Unclassified
(35.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.167 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92
1N55_00792460
2ICChiseqgaiiDRAFT_22398102
3INPhiseqgaiiFebDRAFT_1011736781
4JGI10214J12806_110190582
5Ga0063455_1002723531
6Ga0062590_1018744201
7Ga0062592_1025939951
8Ga0066683_104226742
9Ga0066673_105309682
10Ga0066688_105753551
11Ga0066685_100909143
12Ga0066685_103026602
13Ga0068868_1012636581
14Ga0068868_1020796352
15Ga0070711_1001621131
16Ga0066686_108312632
17Ga0066682_109513972
18Ga0070697_1006273132
19Ga0066697_107435651
20Ga0070696_1013751451
21Ga0070693_1006711772
22Ga0066670_103037632
23Ga0066670_107730271
24Ga0066703_108766602
25Ga0066708_109564541
26Ga0070702_1010239291
27Ga0066656_111261972
28Ga0066652_1005050802
29Ga0070716_1000568313
30Ga0079222_101435512
31Ga0066660_113449401
32Ga0074063_142161862
33Ga0066710_1013231931
34Ga0099830_106368691
35Ga0099828_118594381
36Ga0099827_116909111
37Ga0105245_113254161
38Ga0105058_10327711
39Ga0126305_108634652
40Ga0126315_102770802
41Ga0126308_101050841
42Ga0134070_102899822
43Ga0134084_104630251
44Ga0134064_102567092
45Ga0134062_105500982
46Ga0105239_126849932
47Ga0134127_117714472
48Ga0151489_13230032
49Ga0137393_111247521
50Ga0120146_10041034
51Ga0137388_101752553
52Ga0137382_101150292
53Ga0137382_109554471
54Ga0137380_106491891
55Ga0137376_100310965
56Ga0137376_114980032
57Ga0137370_106571241
58Ga0137367_106325831
59Ga0137367_109251481
60Ga0137366_108596771
61Ga0137369_102953111
62Ga0137368_106886701
63Ga0137368_107428601
64Ga0137375_102354051
65Ga0137375_110385361
66Ga0137375_111260711
67Ga0137361_109623312
68Ga0137390_100854811
69Ga0157303_101163741
70Ga0157303_102593042
71Ga0157285_103190662
72Ga0162651_1000685092
73Ga0164298_110938281
74Ga0164299_104093022
75Ga0134087_105871641
76Ga0164307_118170132
77Ga0182008_109780891
78Ga0134073_103294051
79Ga0132256_1020339251
80Ga0184605_102093852
81Ga0184608_101606371
82Ga0066655_100871712
83Ga0066669_103443052
84Ga0137408_12137601
85Ga0193700_10304071
86Ga0193693_10556281
87Ga0210378_100025121
88Ga0182009_102636122
89Ga0179589_104161861
90Ga0207710_102895931
91Ga0207643_108263471
92Ga0207644_112639562
93Ga0207667_104235251
94Ga0207641_110172091
95Ga0207683_103355002
96Ga0209468_10114074
97Ga0209806_11493051
98Ga0209161_105399301
99Ga0209811_104089081
100Ga0207428_104068012
101Ga0307322_100063653
102Ga0307322_100114391
103Ga0307311_100087713
104Ga0307311_100249542
105Ga0307298_101433801
106Ga0307301_100038435
107Ga0307316_101439982
108Ga0307280_100054461
109Ga0307320_103346511
110Ga0307288_100233142
111Ga0307284_100479901
112Ga0307305_102891442
113Ga0307305_103667002
114Ga0307296_101500992
115Ga0307300_100434371
116Ga0307308_102413381
117Ga0247826_115783242
118Ga0307505_103497692
119Ga0308176_105457002
120Ga0307470_119091641
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.17%    β-sheet: 0.00%    Coil/Unstructured: 63.83%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
75.8%24.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Grasslands Soil
Surface Soil
Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Grass Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Groundwater Sand
Soil
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
20.8%20.0%5.0%16.7%5.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N55_007924602189573000Grass SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPAGGGPKGAVKQFLRKL
ICChiseqgaiiDRAFT_223981023300000033SoilMSGPEAKNPAPAGISSSELDVPALFEQLRAELRRGAPXGDARGXDFAATRALAERFWPVT
INPhiseqgaiiFebDRAFT_10117367813300000364SoilMSGPEAKNPAPAGTSSPEEIDVAVLFERLREELRHGAVQGDSKGAEFASRRALAERFWPVTAEREAGSGPK
JGI10214J12806_1101905823300000891SoilMSGPEAKNPAPAGISSSELDVPALFEQLRAELRRGAPSGDARGGDFAATRALAERFWPVTAERGVG
Ga0063455_10027235313300004153SoilMSGPEAKSPAPAGISAPDDLDVTDLFERLREELRRGAGSGGGAESEFAATRALAERFWPVTAEREAGG
Ga0062590_10187442013300004157SoilMSGPEAKNPAPAGISSSELDVPALFEQLRAELRRGAPSGDARGGDFAATRALAERFWPVT
Ga0062592_10259399513300004480SoilMSGPEAKSPAPAGISAPDDLDVADLFERLREELRRGAGSGGGAESEFAATRALAERFWPVTAEREAG
Ga0066683_1042267423300005172SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPAAEFMSKRALAERFWPVSAEREAGGGLKGFAK
Ga0066673_1053096823300005175SoilMSGPEAKNPVPAGISSPEEIDVAALFERLSEELRRGAGAGASPGAEFASTRALAERFWPVTAEREAGGGAKGLVKRV
Ga0066688_1057535513300005178SoilMSAPEAENPATAGLSSAEDVDVGVLFERLRTELRRGVAEGEARGAEFASVRALAERFWPVTAEREAGSGPKGLVKRFLRKLMR
Ga0066685_1009091433300005180SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPAAEFASNRALAERFWAVSAEREAGGG
Ga0066685_1030266023300005180SoilMSGPEAKNPASAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFAS
Ga0068868_10126365813300005338Miscanthus RhizosphereMSGPEAKNPAPAGISSPEDIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGG
Ga0068868_10207963523300005338Miscanthus RhizosphereMSGPEAKNPAPAGISAPDDLDVADLFEQLCEELRRGAGSGGGAGSEFAATRALAERFWPVTAEREAGGGPKGLVKRLLRKLMR
Ga0070711_10016211313300005439Corn, Switchgrass And Miscanthus RhizosphereMSGPEAKNPAPAGTSAPDDLDVADLFERLREELRRGAGSGGGSGSEFAATRALAER
Ga0066686_1083126323300005446SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPAAEFVSNRALAERFWPVSAEREAG
Ga0066682_1095139723300005450SoilMSGPEAKNPVPAGISSPEEIDVAALFERLSEELRRGAGAGASPGAEFASTRALAERF
Ga0070697_10062731323300005536Corn, Switchgrass And Miscanthus RhizosphereMSGPEGKNPAPAGITSPEEIDVAALFERLREELRRGAVQGDSRGAEFAS
Ga0066697_1074356513300005540SoilMSGPEARNPAPAGISSPEETDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAG
Ga0070696_10137514513300005546Corn, Switchgrass And Miscanthus RhizosphereMSGPEAKNPAPAGISSSEEIDVAALFEQLSMELRRGAGAGAGASPAAEFASTRALAERFWPVTGEREAG
Ga0070693_10067117723300005547Corn, Switchgrass And Miscanthus RhizosphereMSGPEAKNPAPAGISAPDDLDVADLFERLRKELRRGAGTGGGPGSEFAATRALAERFWPV
Ga0066670_1030376323300005560SoilMSAPEAKNPSTAGISSRDDVDVAALFERLREELRRGVPGGDAGAAEFASVRALAERFWPVTAEREAGGGPKGLV
Ga0066670_1077302713300005560SoilMSGPEAKNPAPAGISSAEEIDVAALFDRLSEELRRGAGAGASPAAEFASNRALAERFWPVTAEREAGGGVKGVAKRVLRKLM
Ga0066703_1087666023300005568SoilMSGPEAKNPQTAGVSSGDDVDVDLLFERLRAELRRGTPAGDKRGAEFA
Ga0066708_1095645413300005576SoilMSGPEAKSPAPAGISAPDELDVADLFERLRDELRRGAGGGGSAGADFAATRALAERFWPVTA
Ga0070702_10102392913300005615Corn, Switchgrass And Miscanthus RhizosphereMSGPEAKNPAPAGTSAPDDLDVADLFERLREELRRGAGSGGGSGSEFAAT
Ga0066656_1112619723300006034SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPVAEFASNRALAERFWPVSAE
Ga0066652_10050508023300006046SoilMSGPEAKNPAPAGISAPDDLDVADLFQQLREELGRGAGTGGGAGSEFAATRALAERFWPVTAERE
Ga0070716_10005683133300006173Corn, Switchgrass And Miscanthus RhizosphereMSGPEAKNPAPAGISSPEETDVAALFDRLREELRRGAVHEDSRGAEFASARALAERFWPVTAERPAGGGFKGA
Ga0079222_1014355123300006755Agricultural SoilMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGTGGGPGSEFAATRALAERFWPVTGEREAGGGPKGFVKRILRKFIRW
Ga0066660_1134494013300006800SoilMSGPEAKNPAPAGISSAEEIDVVALFDRLSEELRRGAGAGASPAAEFASNRALAERFWPVTAEREAGGGPKGIAKR
Ga0074063_1421618623300006953SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPV
Ga0066710_10132319313300009012Grasslands SoilMSAPEAKNPATAGISSDEDVDVGVLFERLRAELRRGVPEGDARGAEFASVRALAERFWPVTAEREAG
Ga0099830_1063686913300009088Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGALHADSRGAEYASTRALAER
Ga0099828_1185943813300009089Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGADHEDSRGAEYASTRALAERFSPVTAEHPAGAGLKGVVKRFLRKLMRWYV
Ga0099827_1169091113300009090Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEYASARALAERFWLVTAEHPAGAGVKGVVKRFLRKRPRRGVFGPA
Ga0105245_1132541613300009098Miscanthus RhizosphereMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGTGGGPGSEFAAT
Ga0105058_103277113300009837Groundwater SandMSGPEAKHPAPAGISSSEIDVADLFERLREELRRGAVHGDARGADFAATRA
Ga0126305_1086346523300010036Serpentine SoilMSGPEAKNPVPAGISSSEIDVADLFERLREELRRGAVHGDARGADFAATRALAERFWPVT
Ga0126315_1027708023300010038Serpentine SoilMSAPEAKNRASAGISSSEEVDVPELFERLREELSRGAMHERAPGAAYASTRALAERVWPVTAEREVGGGPKGLVKRILRKLMRWYVE
Ga0126308_1010508413300010040Serpentine SoilMSGPEAKNPAPAGISSSEEIDVAALFERLREELRRGAAVGDARGADFAATRALAERFWPVSAER
Ga0134070_1028998223300010301Grasslands SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPAAEFVSNRALAERFWPVSAEREAGGGLKGFAKRVLRKLMRW
Ga0134084_1046302513300010322Grasslands SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAEH
Ga0134064_1025670923300010325Grasslands SoilMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGSGGGAESEFAATRALAERFWPVTAEREAGG
Ga0134062_1055009823300010337Grasslands SoilMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGGGGAAGSDFA
Ga0105239_1268499323300010375Corn RhizosphereMSGPEAKNPAPAGISSPEDIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGAKGVVKR
Ga0134127_1177144723300010399Terrestrial SoilMSGPEAKNPAPAGISAPDDIDVADLFERLRDELRRGVGGGDSAGAEFAATRA
Ga0151489_132300323300011106SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRGL
Ga0137393_1112475213300011271Vadose Zone SoilMSGPDAKNPAPAGISSPEEIDVAALFDRLREELRRGAVQEDSRGAEFASTRALAERFWPATAERPAGGGLRGAVKRLLRK
Ga0120146_100410343300011992PermafrostMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGP
Ga0137388_1017525533300012189Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWLVTAERPAGGGPKGVVKRVLRKIMRW
Ga0137382_1011502923300012200Vadose Zone SoilMSGPEAKNPAPAGTFAPDDIDVADLFERLRDELRRGAGAGDSPGAEFAATRALAERFWPVTA*
Ga0137382_1095544713300012200Vadose Zone SoilMSAPEAKNPATAGVSSDDDVDVGVLFERLRAELRRGVPEGDARGAEFASVRALAERFWPVTAER
Ga0137380_1064918913300012206Vadose Zone SoilMSGPEAKNPAPAGISSPDEIDVAALFERLREELRRGAVEGGKRDVELASTRALAERFWPVTAERDAGS
Ga0137376_1003109653300012208Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREEVRRGAVHEDSRGAEYASTRALAERFWPVTAEHPA
Ga0137376_1149800323300012208Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFA*
Ga0137370_1065712413300012285Vadose Zone SoilMSGPEAKSPAPAGISAPDDLDVTDLFERLREELRRGAGSGGGAESEFAATRALAER
Ga0137367_1063258313300012353Vadose Zone SoilMSGSEAKNPAPAGISSPDEIDVAVLFERLREELRRGTVDGDKRDAEFASARALAERFWPVTAERDAGGGPKGLVKR
Ga0137367_1092514813300012353Vadose Zone SoilMSGPEGKNPAPAGISSSEEIDVAELFERLREELRHGAADGDTRGAEVAATRALAERFWP
Ga0137366_1085967713300012354Vadose Zone SoilMSGPEAKNPAPAGISSPDEIDVAALFERLREELRRGAPDAGAEGADFAATRALAE
Ga0137369_1029531113300012355Vadose Zone SoilMSGPEGKNPAPAGISSSEEIDVAELFERLREELRHGAADGDTRGAEVAATRALAERFW
Ga0137368_1068867013300012358Vadose Zone SoilMSGPEAKNPVPAGISSPDEIDVAVLFERLREELRRGAVDGDKWDAEFASVRALAERFWPVTAEREAGGGPKGFVKRLL
Ga0137368_1074286013300012358Vadose Zone SoilMSGSEAKNPAPAGISSPDEIDVAVLFERLREELRRGTVDGDKRDAEFASARALA
Ga0137375_1023540513300012360Vadose Zone SoilMSGSEAKNPAPAGISSPDEIDVAVLFERLREELRRGAVDGDKRDAEFASV
Ga0137375_1103853613300012360Vadose Zone SoilMSGPEAKNPVPAGISSPDEIDVAVLFERLREELRRGAVDGDKRDAEFASV
Ga0137375_1112607113300012360Vadose Zone SoilMAGPEAKNPAPAGISSSEEIDVAALFERLREELRRGAAAGDAQGAEFAAARALAERFWPVTAEREAR
Ga0137361_1096233123300012362Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGPKGAVKRFL
Ga0137390_1008548113300012363Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGALHEDSRGAEYASTRALAERFSPVTAEHPAGAGLKGVVKRFLRKLM
Ga0157303_1011637413300012896SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPV
Ga0157303_1025930423300012896SoilMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGAGEGAASEFAATRALAER
Ga0157285_1031906623300012897SoilMSGPEAKNPAPAGISSSELDVPALFEQLRAELRRGAPSGDARGGDFAATRALA
Ga0162651_10006850923300012938SoilMSGPEAKNPAPAGISSPEETDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGPKGI
Ga0164298_1109382813300012955SoilMSGPEAKNPAPAGISSPEDIDVAALFDRLREELRRGAVREDSRGAEFASARELAERFWPVTAERPAGSGPKGVVKRFLRKLMRW
Ga0164299_1040930223300012958SoilMSGPEAKNPAPAGTSAPADLDVADLFERLSEELRRGAGSGGGSGSEFAATRALAERFWPVTAEREAGGGPKGLLKRMLRKLMRW
Ga0134087_1058716413300012977Grasslands SoilMSGPEAKNPAPAGITSPEEIDVAALFERLREELRRGAADGDTRDAEVASIRALAERFWPVSAERDPGGGPKGALKRFLRKLM
Ga0164307_1181701323300012987SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAER
Ga0182008_1097808913300014497RhizosphereMSGPEAKNPAPAGISAPDDIDVADLFERLREELRRGGGAGDSAAAEFAATRALAERFWPVTAEREAGGGP
Ga0134073_1032940513300015356Grasslands SoilVLEEKNAAAAGLSEAGADDVVELYRRLRDELRQGASGAGGRAGDAAATRALAERFWPVTAEREAGGGPKGLVKRVLRKLMR
Ga0132256_10203392513300015372Arabidopsis RhizosphereMSGPEAKNPAPAGTSAPDDLDVADLFEQLRAELRRGAGAGGGAESEFAATRAL
Ga0184605_1020938523300018027Groundwater SedimentMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGPKGAV
Ga0184608_1016063713300018028Groundwater SedimentMSGPEAKNPAPAGISAPDDIDVADLFERLREELRRGAGAGDSPGAEFAATRALAERFWPVTAERPAGGGPKGLVKRFLRK
Ga0066655_1008717123300018431Grasslands SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLSEELRRGAAAGASPAAEFASNRALAERFW
Ga0066669_1034430523300018482Grasslands SoilMSGPEAKSPAPAGISAPDDLDVTDLFERLRDELRRGAGSGGGAESEFAATRALAERFWPVTAEREAGGGPKGLVKRVLRKL
Ga0137408_121376013300019789Vadose Zone SoilMSGPEAKNPAPAGISSPEETDVAALFDRLREELRRGAVHGDSQGAEFASTRALAERFWPVTTERPAGGGPKGVVKR
Ga0193700_103040713300019873SoilMSGPEAKNPAPAGISAPDDIDVADLFERLREELRRGAGAGDSPGAEFAATRALAERFWP
Ga0193693_105562813300019996SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPAGGGPKGAVKRFLRKLM
Ga0210378_1000251213300021073Groundwater SedimentMSGPEAKHPAPAGISSSEIDVADLFERLREELRRGAVHGDARSADFAATRGLAERFWPV
Ga0182009_1026361223300021445SoilMSGPEAKNPAPAGISAPDDLDVADLFERLRDELRRGAGSGGSAGSEFAATRALAERFWPVTAEREAGGGP
Ga0179589_1041618613300024288Vadose Zone SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPAGGGPKGAVKRFLRK
Ga0207710_1028959313300025900Switchgrass RhizosphereMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPAGGGPKGAVKRFL
Ga0207643_1082634713300025908Miscanthus RhizosphereMSGPEAKNPAPAGISSPEDIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGAKGVVKRFLRK
Ga0207644_1126395623300025931Switchgrass RhizosphereMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRAL
Ga0207667_1042352513300025949Corn RhizosphereMSGPEAKNPAPAGISAPDDLDVADLFERLREELRRGAGTGGGPGSEFAATRALAERFWPV
Ga0207641_1101720913300026088Switchgrass RhizosphereMSGPEAKNPAPAGTSAPDDLDVADLFERLREELRRGAGSGGGGSELAATRALAERFWPVTAEREAGGGPKGLVKRMLRKLMR
Ga0207683_1033550023300026121Miscanthus RhizosphereMSGPEAKNPASAGISSPEDIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERF
Ga0209468_101140743300026306SoilMSGPEAKNPAPAGISAPDDLDVVDLFERLREELRRGAGSGGGAESEFAATRALAERFWPVTAER
Ga0209806_114930513300026529SoilMSGPEAKNPQTAGISSGDDVDVDLLFERLRAELRRGTPAGDKRGAEFA
Ga0209161_1053993013300026548SoilMSGPEAKNPAPAGISSAEEIDVVALFDRLSEELRRGAGAGASPAAEFASNRALAERFWPVTAEREAG
Ga0209811_1040890813300027821Surface SoilMSGPEAKNPAPAGISAPDDLDVADLFEELREELRRGAGSGGGAGSEFAATRALAERFWPVTAER
Ga0207428_1040680123300027907Populus RhizosphereMSGPEAKSPAPAGISAPDDLDVADLFERLREELRRGAGSGGGAESEFAATRALAERFWPVTAEREAGGGPKGLVKRVL
Ga0307322_1000636533300028710SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAER
Ga0307322_1001143913300028710SoilMSGPEAKNPAPAGISAPDDIDVADLFERLRDELRRGAGAGDSPGAEFAATRALAERFWPVTAERPAGGGPKGL
Ga0307311_1000877133300028716SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTR
Ga0307311_1002495423300028716SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPAGGGPKGAV
Ga0307298_1014338013300028717SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPA
Ga0307301_1000384353300028719SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGVEFASTRAL
Ga0307316_1014399823300028755SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAE
Ga0307280_1000544613300028768SoilMSGPEAKNPAPAGISSPEETDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERFWPVTAERPAGGGPK
Ga0307320_1033465113300028771SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRAL
Ga0307288_1002331423300028778SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTAERPA
Ga0307284_1004799013300028799SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEYASTR
Ga0307305_1028914423300028807SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEYASTRALAERFWPVTAEHPAGGGLKGVVKRFL
Ga0307305_1036670023300028807SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEYASTRALAER
Ga0307296_1015009923300028819SoilMSGPEAKNPAPAGISSPEEIDVAALFDRLREELRRGAVHEDSRGAEFASTRALAERF
Ga0307300_1004343713300028880SoilMSGPEAKNPAPAGISAPDDIDVADLFERLREELRRGAGAGDSPGAEFVAT
Ga0307308_1024133813300028884SoilMSGPEAKNPAPAGISSSEVDVSALFERLREELRRGAVAGDARGADFAATRALAERFWPVTAERDARG
Ga0247826_1157832423300030336SoilMSGPEAKNPATAGISAPDDIDVADLFERLREELQRGVGGGESAGAEFAATRALAERFWPVTAERPAGGGPK
Ga0307505_1034976923300031455SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERF
Ga0308176_1054570023300031996SoilMSGPEAKNPAPAGISAPDDIDVADLFERLREELRRGAGAGDSAAADFAATRALAERFWPVTAEREAGGGPKGF
Ga0307470_1190916413300032174Hardwood Forest SoilMSGPEAKNPAPAGISSPEEIDVAALFERLREELRRGAVQGDSRGAEFASTRALAERFWPVTA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.