Metagenome / Metatranscriptome Family F073937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073937
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	83 residues
Representative Sequence	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.18 %
% of genes near scaffold ends (potentially truncated)	20.83 %
% of genes from short scaffolds (< 2000 bps)	78.33 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.333 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.55% β-sheet: 0.00% Coil/Unstructured: 50.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF13545	HTH_Crp_2	4.17
PF02954	HTH_8	2.50
PF14417	MEDS	1.67
PF06742	DUF1214	1.67
PF08818	DUF1801	1.67
PF06537	DHOR	1.67
PF12840	HTH_20	1.67
PF13442	Cytochrome_CBB3	1.67
PF00589	Phage_integrase	0.83
PF13188	PAS_8	0.83
PF00313	CSD	0.83
PF08448	PAS_4	0.83
PF00158	Sigma54_activat	0.83
PF00691	OmpA	0.83
PF10150	RNase_E_G	0.83
PF00484	Pro_CA	0.83
PF01872	RibD_C	0.83
PF01972	SDH_sah	0.83
PF04321	RmlD_sub_bind	0.83
PF04366	Ysc84	0.83
PF00378	ECH_1	0.83
PF08327	AHSA1	0.83
PF02583	Trns_repr_metal	0.83
PF03150	CCP_MauG	0.83
PF15780	ASH	0.83
PF01339	CheB_methylest	0.83
PF01402	RHH_1	0.83
PF00027	cNMP_binding	0.83
PF02397	Bac_transf	0.83
PF02374	ArsA_ATPase	0.83
PF13432	TPR_16	0.83
PF00106	adh_short	0.83
PF00072	Response_reg	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.67
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.67
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.67
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.67
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.67
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	1.67
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.67
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.67
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	1.67
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.67
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.83
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.83
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.83
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
All Organisms	root	All Organisms	42.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
cellular organisms	root	All Organisms → cellular organisms	42.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.17 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.17 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.67 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.83 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.67 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.67 %
Candidatus Contendobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.67 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
unclassified Candidatus Contendobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1.67 %
Candidatus Contendobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter → Candidatus Contendobacter sp.	0.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig18241	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
2170459024\|GZTSFBX01EBRMG	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
2199352025\|deepsgr__Contig_55410	Not Available	615	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100468954	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300000955\|JGI1027J12803_109505232	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300004091\|Ga0062387_100438081	Not Available	893	Open in IMG/M
3300004092\|Ga0062389_100399690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1492	Open in IMG/M
3300004633\|Ga0066395_10595579	Not Available	647	Open in IMG/M
3300005163\|Ga0066823_10003453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1967	Open in IMG/M
3300005173\|Ga0066822_1011434	Not Available	584	Open in IMG/M
3300005434\|Ga0070709_11132615	Not Available	627	Open in IMG/M
3300005541\|Ga0070733_10008034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6768	Open in IMG/M
3300005764\|Ga0066903_107781588	Not Available	551	Open in IMG/M
3300005842\|Ga0068858_102216638	Not Available	543	Open in IMG/M
3300006050\|Ga0075028_100913821	Not Available	541	Open in IMG/M
3300006052\|Ga0075029_100132747	Not Available	1519	Open in IMG/M
3300006173\|Ga0070716_100150874	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1495	Open in IMG/M
3300006174\|Ga0075014_100290117	Not Available	859	Open in IMG/M
3300006175\|Ga0070712_100053669	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300006176\|Ga0070765_100003509	All Organisms → cellular organisms → Bacteria	10063	Open in IMG/M
3300006358\|Ga0068871_102116123	Not Available	536	Open in IMG/M
3300006854\|Ga0075425_100592378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300010048\|Ga0126373_10218201	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300010379\|Ga0136449_104248394	Not Available	531	Open in IMG/M
3300011120\|Ga0150983_16102646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012971\|Ga0126369_10133327	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300016294\|Ga0182041_12044515	Not Available	534	Open in IMG/M
3300016341\|Ga0182035_10353763	Not Available	1221	Open in IMG/M
3300016341\|Ga0182035_11162908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300016371\|Ga0182034_11165985	Not Available	669	Open in IMG/M
3300016387\|Ga0182040_10733422	Not Available	810	Open in IMG/M
3300016422\|Ga0182039_10644424	Not Available	930	Open in IMG/M
3300016445\|Ga0182038_11551985	Not Available	595	Open in IMG/M
3300017822\|Ga0187802_10027132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2012	Open in IMG/M
3300017924\|Ga0187820_1038637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300017928\|Ga0187806_1012332	All Organisms → cellular organisms → Bacteria → Acidobacteria	2405	Open in IMG/M
3300017930\|Ga0187825_10117844	Not Available	926	Open in IMG/M
3300017932\|Ga0187814_10076844	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300017932\|Ga0187814_10124562	Not Available	956	Open in IMG/M
3300017933\|Ga0187801_10068110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300017955\|Ga0187817_11094393	Not Available	511	Open in IMG/M
3300018006\|Ga0187804_10252591	Not Available	761	Open in IMG/M
3300020579\|Ga0210407_10000050	All Organisms → cellular organisms → Bacteria	160488	Open in IMG/M
3300020579\|Ga0210407_10143661	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300020579\|Ga0210407_10453140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300020579\|Ga0210407_10635508	Not Available	830	Open in IMG/M
3300020580\|Ga0210403_10042286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3643	Open in IMG/M
3300020580\|Ga0210403_10191067	Not Available	1679	Open in IMG/M
3300020580\|Ga0210403_10441071	Not Available	1061	Open in IMG/M
3300020580\|Ga0210403_10544616	Not Available	940	Open in IMG/M
3300020580\|Ga0210403_11141040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300020581\|Ga0210399_10017335	All Organisms → cellular organisms → Bacteria	5689	Open in IMG/M
3300020581\|Ga0210399_10156312	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300020581\|Ga0210399_10163230	Not Available	1845	Open in IMG/M
3300020581\|Ga0210399_10250461	Not Available	1476	Open in IMG/M
3300020581\|Ga0210399_10802500	Not Available	768	Open in IMG/M
3300020583\|Ga0210401_10095328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2795	Open in IMG/M
3300021088\|Ga0210404_10097728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1475	Open in IMG/M
3300021168\|Ga0210406_10032757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4679	Open in IMG/M
3300021168\|Ga0210406_10335557	Not Available	1222	Open in IMG/M
3300021168\|Ga0210406_10692354	Not Available	786	Open in IMG/M
3300021170\|Ga0210400_10002628	All Organisms → cellular organisms → Bacteria	16449	Open in IMG/M
3300021180\|Ga0210396_10407546	Not Available	1195	Open in IMG/M
3300021401\|Ga0210393_10296030	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300021404\|Ga0210389_10079596	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	2517	Open in IMG/M
3300021405\|Ga0210387_10782800	Not Available	843	Open in IMG/M
3300021406\|Ga0210386_11396634	Not Available	587	Open in IMG/M
3300021406\|Ga0210386_11617394	Not Available	537	Open in IMG/M
3300021407\|Ga0210383_10014764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6587	Open in IMG/M
3300021477\|Ga0210398_10143919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1939	Open in IMG/M
3300021478\|Ga0210402_10789648	Not Available	874	Open in IMG/M
3300021559\|Ga0210409_11655980	Not Available	516	Open in IMG/M
3300021560\|Ga0126371_10187089	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300021560\|Ga0126371_10441584	Not Available	1446	Open in IMG/M
3300025916\|Ga0207663_10291458	Not Available	1216	Open in IMG/M
3300026467\|Ga0257154_1052146	Not Available	635	Open in IMG/M
3300026551\|Ga0209648_10140316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Contendobacter → unclassified Candidatus Contendobacter → Candidatus Contendobacter sp.	1923	Open in IMG/M
3300027313\|Ga0207780_1055583	Not Available	674	Open in IMG/M
3300027667\|Ga0209009_1014203	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300027703\|Ga0207862_1058779	Not Available	1158	Open in IMG/M
3300027867\|Ga0209167_10012110	All Organisms → cellular organisms → Bacteria → Acidobacteria	4083	Open in IMG/M
3300030848\|Ga0075388_11470592	Not Available	506	Open in IMG/M
3300031057\|Ga0170834_106113527	Not Available	553	Open in IMG/M
3300031057\|Ga0170834_106121220	Not Available	812	Open in IMG/M
3300031057\|Ga0170834_106355313	All Organisms → cellular organisms → Bacteria	3060	Open in IMG/M
3300031090\|Ga0265760_10247551	Not Available	616	Open in IMG/M
3300031122\|Ga0170822_15606231	Not Available	1023	Open in IMG/M
3300031128\|Ga0170823_14736109	Not Available	666	Open in IMG/M
3300031128\|Ga0170823_16550041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300031231\|Ga0170824_117135621	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300031231\|Ga0170824_120337524	Not Available	627	Open in IMG/M
3300031469\|Ga0170819_17354931	Not Available	664	Open in IMG/M
3300031474\|Ga0170818_110754415	Not Available	606	Open in IMG/M
3300031718\|Ga0307474_10036632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3612	Open in IMG/M
3300031719\|Ga0306917_11220070	Not Available	583	Open in IMG/M
3300031720\|Ga0307469_10878361	Not Available	829	Open in IMG/M
3300031753\|Ga0307477_10112419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1896	Open in IMG/M
3300031754\|Ga0307475_10014292	All Organisms → cellular organisms → Bacteria → Acidobacteria	5400	Open in IMG/M
3300031820\|Ga0307473_10169677	Not Available	1264	Open in IMG/M
3300031820\|Ga0307473_10192646	Not Available	1203	Open in IMG/M
3300031912\|Ga0306921_11542157	Not Available	724	Open in IMG/M
3300031941\|Ga0310912_10816165	Not Available	720	Open in IMG/M
3300031947\|Ga0310909_10580730	Not Available	937	Open in IMG/M
3300031954\|Ga0306926_12228757	Not Available	609	Open in IMG/M
3300032076\|Ga0306924_12454793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300032174\|Ga0307470_10294539	Not Available	1097	Open in IMG/M
3300032180\|Ga0307471_101031668	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300032180\|Ga0307471_101407364	Not Available	857	Open in IMG/M
3300032180\|Ga0307471_102391581	Not Available	667	Open in IMG/M
3300032205\|Ga0307472_100672721	Not Available	926	Open in IMG/M
3300032261\|Ga0306920_102586145	Not Available	696	Open in IMG/M
3300032261\|Ga0306920_102869950	Not Available	654	Open in IMG/M
3300032770\|Ga0335085_10580291	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300032782\|Ga0335082_10069170	All Organisms → cellular organisms → Bacteria	3579	Open in IMG/M
3300032782\|Ga0335082_10880717	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300032783\|Ga0335079_10017079	All Organisms → cellular organisms → Bacteria	8292	Open in IMG/M
3300033405\|Ga0326727_11035939	Not Available	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.67%
Host-Associated	Host-Associated	2.50%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Aquatic	Environmental → Aquatic	11.67%
Plants	Host-Associated → Plants	2.50%
Modeled	Engineered → Modeled	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.17%
Freshwater	Environmental → Aquatic → Freshwater	9.17%
Sediment	Environmental → Aquatic → Sediment	2.50%
Peat	Environmental → Terrestrial → Peat	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Roots	Host-Associated → Plants → Roots	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.83%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0241.00001710	2166559005	Simulated	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEI
FD1_08298210	2170459024	Grass Soil	TKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
deepsgr_00650050	2199352025	Soil	VSSSAQKVQREYQKMKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEIIVEGVIHPN
INPhiseqgaiiFebDRAFT_1004689541	3300000364	Soil	MKDRKFRMDNRTETKVLSEDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLEAGLNLEDSLEMLVEGVIRPN*
INPhiseqgaiiFebDRAFT_1007852462	3300000364	Soil	MKDRKIRLKSDAETKALPKEIRERLGQIDKDMVLKLETLDFLFAGSKDYPEHFHRFYVQPLLESGLTLQDSLDLLVDGVLRPN*
JGI1027J12803_1095052324	3300000955	Soil	MKDRKFRMDNRTETKVLSEDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLEAGLNFEDSLEMLVEGV
Ga0062387_1004380812	3300004091	Bog Forest Soil	MKDRKTRMRGNAQSKALSKDIRKRLDLIDKDMDLKLRTIGCIFSETQNHPEEFHQLYVQPLLDAGLSLEDSLEMLVESVILPN*
Ga0062389_1003996902	3300004092	Bog Forest Soil	MKEKNEMKDRKIRIRGNVESKSLSKDIRKRLELIDKDMDLKLQTIGRIFSVTKNYPEEFHQLYVQPLLDADLTLEASLEMLVEGVILPN*
Ga0066395_105955791	3300004633	Tropical Forest Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHLLYVQPLLESGLSLEDSLEMLVEGVIRPN*
Ga0066823_100034532	3300005163	Soil	MKDRKFRINNSAETKAVSKNFRERLELMDKDTDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLQDSLDLLVEGVIRPN*
Ga0066822_10114341	3300005173	Soil	FRINNSAETKAVSKNFRERLELMDKDTDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLQDSLDLLVEGVIRPN*
Ga0070709_111326152	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN*
Ga0070733_100080344	3300005541	Surface Soil	MKDRKIRIRSSAYTKRRSKDIHERLDAIDKDMDLKLLTLSCIFLGTEGYPEQFHELYVKPLLDEGLTLENSLDMLVDGVLLPN*
Ga0066903_1077815881	3300005764	Tropical Forest Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHLLYVQPLLESGLNLEDSLEMLVEGVIRPN*
Ga0068858_1022166381	3300005842	Switchgrass Rhizosphere	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLESGLNLEDSLE
Ga0075028_1009138211	3300006050	Watersheds	MKDRKFRMNNSTETKVVSKDIRERLELIDNDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN*
Ga0075029_1001327472	3300006052	Watersheds	MKDRKIRVKNSAQIKVASQDIRERLELIDKDMDLKLQTLNYIFSGTKDYAEEFHQLYVQPLLESGLTLEDSLEMLVEGVLRPN*
Ga0070716_1001508742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIISGTKDCPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN*
Ga0075014_1002901171	3300006174	Watersheds	MKDRKILMKNSAQLKVESKDIRERLELIDKDMDLKLQTLNYIFSGTKDYAEEFHQLYVQPLLESGLTLEDSLEMLVEGVLRPN*
Ga0070712_1000536697	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN*
Ga0070712_1005941443	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKDRKIRLKSDAETKALPKEIRERLGQIDKDMVLKLETLDFLFAGSKEYPEHFHRFYVQPLLESGLTPEDSLDLLVDGVLRPN*
Ga0070765_10000350912	3300006176	Soil	MKDRKMRIRSSADTKRISKDIRERLDLIDKDMALKLQTLGCIFSGTQDHPEEFHQLYVQPLLDAGLTLENSLEMLVEGVLLPN*
Ga0068871_1021161231	3300006358	Miscanthus Rhizosphere	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLESGLNLEDSL
Ga0075425_1005923783	3300006854	Populus Rhizosphere	MKDRKFRMNNSTETKVVSKDIRERLELIDKDLDLKLQTLANIISGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN*
Ga0126373_102182011	3300010048	Tropical Forest Soil	MKVRKINRNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFAGTKDYAEEFHQLYVQPLLESGLNLEESLEMLVEGVIRPN*
Ga0136449_1042483941	3300010379	Peatlands Soil	MKDRKFRMNNSTETKVVSKDIRERLEFIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRP
Ga0150983_161026462	3300011120	Forest Soil	MKDRKFRMNNSTETKVVSKDIRERLELIHKDMDLKLQTLANVFSMTKDYPEQFHQLYVQPLLESGLNLEDSVEVLVQGMIRPN*
Ga0126369_101333273	3300012971	Tropical Forest Soil	VWNRLSFNAQKVQQEYKEMKDRKIRMNSRTETKSVSKEIRECLELIDKDMDRKLQTLANIFSGTKDYAEEFHLLYVQPLLDSGLTLEDSLEMLVEGVIYPN*
Ga0182041_120445151	3300016294	Soil	MKVRKISVNNGTETKVKSKEIRERLEVIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLSLEDSLEMLVEGVI
Ga0182035_103537631	3300016341	Soil	MKVRKINVNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLSLEDSLEMLVEGVILPN
Ga0182035_111629082	3300016341	Soil	VSFSAQKVQREYWKMKDRKIRMNNGTETQGVSKEIRERLELIDKDMDLKLQTLANIFSGTKDDPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0182034_111659851	3300016371	Soil	NFACNDYSGASRVSSSAQKVQREYQKMKDRKFRMNNSTETKVVSKDIRERLEMIDKDMDLKLQTLANVFSGTRDNPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0182040_107334222	3300016387	Soil	EMKDRKFRMNNGTETNVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0182039_106444241	3300016422	Soil	VSFSAQKVQREYWKMKDRKIRMNNGTETQGVSKEIRERLELIDKDMDLKLQTLANIFSGTKDCAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0182038_115519851	3300016445	Soil	MKVRKINVNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLEDSLEMLVEGVLRPN
Ga0187802_100271323	3300017822	Freshwater Sediment	MKNRKTRKAVSKYIREHLDELIDNDTNLKLQTLDLIFSGSKDYAEEFHELYVEPLLESGLTLEHSLAMLVEGVVRPN
Ga0187820_10386372	3300017924	Freshwater Sediment	RKTRKAVSKYIREHLDELIDNDTNLKLQTLDLIFSGSKDYAEEFHQLYVEPLLESGLTLEHSLAILVEGVVRPN
Ga0187806_10123324	3300017928	Freshwater Sediment	MKNRKTRKAVSKYIREHLDELIDNDTNLKLQTLDLIFSGSKDYAEEFHELYVEPLLESGLTLEHSLAILVEGVVRPN
Ga0187825_101178441	3300017930	Freshwater Sediment	MKDRKIRKGVSKYIREHLDELIDNDTNLKLQTLDLIFSGSKDYAEEFHQLYVEPLLESGLTLEESRALLAEGALRPN
Ga0187814_100768441	3300017932	Freshwater Sediment	MKDRKIRTRGNAETKPLSRDIHERLESIDKDMDLKLQTLGYIFSGTKDYPEEFCQLYLQPLLDSGLTLEDSLAMLVEGVLLPN
Ga0187814_101245622	3300017932	Freshwater Sediment	MKNRKTRKAVSKYIREHLDELIDNDTNLKLQTLDLIFSGSKDYAEEFHQLYVEPLLESGLTLEHSLAILVEGVVRPN
Ga0187801_100681102	3300017933	Freshwater Sediment	MKDSKIRTKNSAQIKVVSKDIRERLELIDKGMNLKLQTLDYFFSGTKDCAEEFHQLYVQPLLESGLTLEDSLAMLVEGVLRPN
Ga0187817_110943931	3300017955	Freshwater Sediment	MKDRKNRMKNNMRTKIMPKDIRERLEFIDQDMDLKLQVLGYIYYGSKYYAEEFQQLYVEPLLESGLTLEDSLAMLVEGVLRPN
Ga0187804_102525911	3300018006	Freshwater Sediment	MKDRIRTKNSAQIKVVSQDIRERLELIDKGMNLKLQTLDYFFSGTKDCAEEFHQLYVQPLLESGLTLEDSLAMLVEGVLRPN
Ga0210407_10000050145	3300020579	Soil	MKDRKIRMKNSAENKAPKNIRERLELIDQDMNLKLQTLASIFSGTQDYAEEFHLLYVQPLLESGLTLEDSLEMLVEGVIRPN
Ga0210407_101436612	3300020579	Soil	MKDRKFRMNNSTETKVVSKDIRERLELIHKDMDLKLQTLANIFLGTKDYPEEFHQLYVQPLLESGLNLEDSVEMLVQGVIRPN
Ga0210407_104531401	3300020579	Soil	MKDRKFRMNRSTDTKVVSKDIRERLELIHKDMDLKLQTLANVFSMTKDYPEQFHQLYVQPLLESGLNLEDSVEVLVQGMIRPN
Ga0210407_106355081	3300020579	Soil	VSSSAQKVQREYQKMKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0210403_100422863	3300020580	Soil	MNNGTQTKVVSKDIRERLELIDKDMYLKLQTLANIFSGTRDYPEEFYQLYVQPLLESGLNLEDSLEMLVKGVIRPN
Ga0210403_101910671	3300020580	Soil	MKDRKSRMNNSTETKVVSNDIRERLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVEPLLESGLNLEDSLEILVEGVIRPN
Ga0210403_104410712	3300020580	Soil	MKDRKIRIRSTADTKRISREISERLGSIDKDMDLKLQTLGCIFSGTKDHPEEFHQLYVQPLLDAGLTLEDSLEMLVEGVLLPN
Ga0210403_105446161	3300020580	Soil	RKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0210403_111410401	3300020580	Soil	MKDRKFRMNRSTDTKVVSKDIRDRLELIHKDMDLKLQSLANVFSMTKDYPEEFHQLYVQPLLESGLNLEDSLEVLVEGVIRPN
Ga0210399_100173358	3300020581	Soil	MKDRKSRMNNSTETKVGSNDIRERLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVEPLLESGLNLEDSLEILVEGVIRPN
Ga0210399_101563122	3300020581	Soil	MKDRRFRMNNGTQTKVVSKDIRERLELIDKDMYLKLQTLANIFSGTRDYPEEFYQLYVQPLLESGLNLEDSLE
Ga0210399_101632301	3300020581	Soil	MKDRKIRMKNSAENKAPKNIRERLELIDQDMHLKLQTLANIFSGTQDYAEEFHLLYVQPLLESGLTLEDSLEMLVEGVIRPN
Ga0210399_102504612	3300020581	Soil	MKERKFRMNNSTETKVVSKDIRERLELIDKDIVLKLQTLANIFSGTKNYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0210399_108025001	3300020581	Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDNDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0210401_100953283	3300020583	Soil	MKDRKFRMNRSTDTKVVSKDIRERLELIHKDMDLKLQTLANVFSMTKDYPEQFHQLYVQPLLESGLNLEDSLEVLVEGVILPN
Ga0210404_100977283	3300021088	Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0210406_100327572	3300021168	Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0210406_103355572	3300021168	Soil	MKDRKFRMNNTTKTKVVSKDIRERLELIDKDMDLKLQTLANIFSETKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0210406_106923541	3300021168	Soil	MKDRKIRMKNSAENKAPKNIRERLELIDQDMNLKLQTLASIFSGTQDYAEEFHLLYVQPLLESGLTLEDSLEMLVEGV
Ga0210400_1000262813	3300021170	Soil	MKDRKFRMNRSTDTKVVSKDIRERLEFIHKDMDLKLQTLANVFSMTKDYPEQFHQLYVQPLLESGLNLEDSLEVLVEGVILPN
Ga0210396_104075461	3300021180	Soil	VSSSAQIVQREYQKMEDRKFRMNNSTETKVVSKDIRESLELNDKDTYLKLQAPANIFSGAKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0210393_102960301	3300021401	Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDNDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSL
Ga0210389_100795963	3300021404	Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANVFSMTKDYPEEFHQLYVQPLLESGLNLEDSLEVLVEGVIRPN
Ga0210387_107828001	3300021405	Soil	MNNGTQTKVVSKDIRERLELIDKDVYLKLQTLANIFSGTRDYPEEFYQLYVQPLLESGLNLEDSLEMLVKGVIRPN
Ga0210386_113966341	3300021406	Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLE
Ga0210386_116173941	3300021406	Soil	MKDRKIRIKNSAQIKVVSKDIRERLDELIDNDVDLKLQTLDYIFSGTKDYAEEFLELYVQPLLESGLTLEESLAMLVRGVLRP
Ga0210383_100147644	3300021407	Soil	MKDRRFRMNNGTQTKVVSKDIRERLELIDKDMYLKLQTLANIFSGTRDYPEEFYQLYVQPLLESGLNLEDSLEMLVKGVIRPN
Ga0210398_101439193	3300021477	Soil	MKDRKFRMNRSTDTKVVSKDIRERLELIHKDMDLKLQTLANVFSMTKDYPEQFHQLYVQPLLESGLNLEDSLEVLVEGVIRPN
Ga0210402_107896481	3300021478	Soil	MKDRRFRMNNGTQTKVVSKDIRERLELIDKDVYLKLQTLANIFSGTRDYPEEFYQLYVQPLLESGLNLEDSLEMLVKGVIRPN
Ga0210409_116559801	3300021559	Soil	MKDRKFRMNNGTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDCPEEFHQLYVQPLLESGLNLEDS
Ga0126371_101870892	3300021560	Tropical Forest Soil	MKVRKINRSNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFAGTKDYAEEFHQLYVQPLLESGLNLEESLEMLVEGVIRPN
Ga0126371_104415842	3300021560	Tropical Forest Soil	MKDRKFRMNNGTETKVVSKNIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLRESGLNLEDSLEMLVEGVIRPN
Ga0207663_102914581	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0257154_10521462	3300026467	Soil	MKDRKFRMNKGTQTKVVSKDISERLELIDKDMYLKLQTLANIFSGTRDYPEEFHQLYVQPLLESGLNLEDSLEMLVKGVIRPN
Ga0209648_101403163	3300026551	Grasslands Soil	MKDSKIRTKNRAQIKVVSKDIRERLELIDKDLNLKLQTLDYIFCGTKDCAEESHQLQVQSLLESGLTLEDSLARANR
Ga0209648_102814312	3300026551	Grasslands Soil	MKDRKIRMKTKDETKVMTDDIRERLDRIDKDLNLKLETLDYIFSGTKDYAEEFHQLYVQPLLGSGLTLEDSLAMLVEGVLRPN
Ga0207780_10555831	3300027313	Tropical Forest Soil	VSFSAQKVQREYQKMKYRKIRINNSAETKVMSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0209009_10142033	3300027667	Forest Soil	MKDRKFRMNDSTKTKVESKDIRERLELIDKDMDLKLQTLANIFSETKDYPEEFHQLYVQPLLESGLNLEDSLEMLVGVIRPN
Ga0207862_10587791	3300027703	Tropical Forest Soil	VSFSAQKVQREYQEMKYRKIRINNSAETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0209167_100121103	3300027867	Surface Soil	MKDRKIRIRSSAYTKRRSKDIHERLDAIDKDMDLKLLTLSCIFLGTEGYPEQFHELYVKPLLDEGLTLENSLDMLVDGVLLPN
Ga0075388_114705921	3300030848	Soil	MKNRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0170834_1061135272	3300031057	Forest Soil	MEDRKFRMKNITETKVVSTDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0170834_1061212202	3300031057	Forest Soil	MKDRKFRMNNSTETKVVSKDIRERLESIDKDMELKLQTLANIFSGTKDYPEEFHQLYVQPLLESGHNLEDSLEMLVEGVIRPN
Ga0170834_1063553133	3300031057	Forest Soil	MKDRKIRMKNSAENKAPKNIRERLEFIDQDMNLKLQTLANIFSGTKDYAEEFHLLYVQPLLESGLTLEDSLELLVAGVIRPN
Ga0265760_102475511	3300031090	Soil	MKDRKIRMKNSAETKVMSKDIRERLELIDKDMDLKLQTLENIFSGTKDYPEEFHQLYVQPLLESGLTLEDSLATLVEGVLRPN
Ga0170822_156062311	3300031122	Forest Soil	MEDRKFRMKNITETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0170823_147361091	3300031128	Forest Soil	MKDRKFRMNNSTETKVVSQDIRERLELIDKDMDLKLQTLANIFSGTKDNPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0170823_165500411	3300031128	Forest Soil	MKNRKFRMTNSTETKVVSKDIRKRLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVQPLLESGLNLEDSLEMLV
Ga0170824_1171356211	3300031231	Forest Soil	MKDRKFRMTNSTETKVVSNDIRERLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVQPLLESGLNLEDSL
Ga0170824_1203375241	3300031231	Forest Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDEDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0170819_173549311	3300031469	Forest Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSATKDYPEEFHQLYVQPLLQSGLNLEDSLDMLVEGVIRPN
Ga0170818_1107544151	3300031474	Forest Soil	MKDRKFRMNNITETKVVSKDIRERLELIDKNMDLKLQTLANIFSGTRDYPEEFHQRYVEPLLESGLNLEDSLEILVEGVIRPN
Ga0307474_100366322	3300031718	Hardwood Forest Soil	MKDRKIRIKNSAQIKVVSKDIREGLDELIDNDVDLKLQTLDYIFSGTKDYTEELLELHVQPLLESGLTLEDSLAMLVGDVLRPN
Ga0306917_112200701	3300031719	Soil	MKVRKINVNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0307469_108783611	3300031720	Hardwood Forest Soil	MKDRKIGTKNSAQIKVVSKDIRERLELIDKDMNLKLQTLDYIFSGTKDCAEEFHQLYVQPLLESGLTLEDSLAMLVEGVLRPN
Ga0307477_101124192	3300031753	Hardwood Forest Soil	MKDRKIRIKNSAQVKVVSKDIREGLDGLIDNDVDLKLQTLDYIFSGTKDYTEEFLELHVQPLLESGLTLEDSLAMLVGGVLRPN
Ga0307475_100142922	3300031754	Hardwood Forest Soil	MKDRKIRMKNGAQIKVVSKDICERLDELIANDMDLKLQTLDYIFSETKDYAEEFHQFYVQPLPESGLTLEDSLAMLVEGALRSN
Ga0307473_101696773	3300031820	Hardwood Forest Soil	MKDSKIRTKNSAQIKIVSKDIRERLELIDKDMNLKLQTLDYIFSGTKDCAEEFHQLYVQPLLESGLTLEDSLAMLVEGVLRPN
Ga0307473_101926461	3300031820	Hardwood Forest Soil	MKDRKFRMNNSTETKVVSKDIRERLELIDKDMDLKLQTLANIFSGTKDYPDEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0306921_115421571	3300031912	Soil	MKDRKFRMNDITGTKVVSKDIRERLEMIDKDMDLKLQTLANVFSGTRDNPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0310912_108161651	3300031941	Soil	MKVRKISVNNGTETKVKSKEIRERLEVIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLSLEDSLEMLVEGVILPN
Ga0310909_105807301	3300031947	Soil	RKGNDAVNFTCNYHGAISVSFSAQKVQREYQEMKVRKINVNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0306926_122287571	3300031954	Soil	ISVSFSAQKVQREYQEMKVRKINVNNGTETKVVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0306924_124547931	3300032076	Soil	ASSRLRKGNDAVHFACNYQGAISVSFSAQKVQREYWKMKDRKIRMNNGTETQGVSKEIRERLELIDKDMDLKLQTLANIFSGTKDCAEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0307470_102945392	3300032174	Hardwood Forest Soil	MKDRKFRMNNSTETKVVSKDIRQRLELIDKDMDLKLQTLANIFSGTKDYPDEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0307471_1010316681	3300032180	Hardwood Forest Soil	MKDRKIRIKNSAQIKVVSKDIREGLDELIDNDVDLKLQTLDYIFSGTKDYAEEFLELYVQPLLESGLTLEDSLAMLVGGVLRPN
Ga0307471_1014073642	3300032180	Hardwood Forest Soil	MKDRKIGTKNSAQIKVVSKDIRERLELIDKGMNLERQTLDYFFSGAKDCAEEFHQLYVQPLLESGVTLEDSLAMLVEGVLRPN
Ga0307471_1023915811	3300032180	Hardwood Forest Soil	MKDRKIRMKNSAGNKAPKNIRERLELIDQDMNLKLQTLANIFSGTKDYAEEFHLLYVQPLLESGLTLEDSLEMLVEGVIRPN
Ga0307472_1006727211	3300032205	Hardwood Forest Soil	MKDRKFRMDNRTETKVLSEDIRERLELIDKDMDLKLQTLANIFSGTKDYPEEFHQLYVQPLLESGLNLEDSLEILVEGVIRPN
Ga0306920_1025861451	3300032261	Soil	VSFSAQKVQREYWKMKDRKIRMNNGTETQGVSKEIRERLELIDKDMDLKLQTLANIFSGTKDYLEEFHQLYVQPLLESGLNLEDSLEML
Ga0306920_1028699501	3300032261	Soil	RKFRMNNITGTKVVSKDIRERLEMIDKDMDLKLQTLANVFSGTRDNPEEFHQLYVQPLLESGLNLEDSLEMLVEGVIRPN
Ga0335085_105802911	3300032770	Soil	LLESNDTAIRACNDDFGAIRVSSSAPESAREYQKMKDRKFRINNGAKVVSKNIREGLELIDKDMDLKLQTLANIFSGSKDYAEEFHQLYVQPLLESGLNLQDSLDLLVEGVIRPN
Ga0335082_100691702	3300032782	Soil	MKDRKFRINNGTETKVVSKNIRERLELMDKDTDLKLQTLANIFSGTKDYAEEFHQLYVQPLLESGLNLQDSLDLLVEGVIRPN
Ga0335082_108807171	3300032782	Soil	MKDRKFRINNGAKVVSKNIREGLELIDKDMDLKLQTLANIFSGSKDYAEEFHQLYVQPLLESGLNLQDSLDLLVEGVIRPN
Ga0335079_100170797	3300032783	Soil	MKDRKIRMKNSAQIKVVSKDIRERLELIDQDMDLKLQMLSSIFSGTKDYAEEFHQLYVQPLLESGLTLEDSLEMLVEGVLRPN
Ga0326727_110359392	3300033405	Peat Soil	MKNRKIRMKNSAQIKVVSKDIRERLELIDQDMDLKLQMLSSIFSGTKDYAEEFHQLYVQPLLESGLTLEDSLEMLVEGVIRPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences