Metagenome Family F073933

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073933
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	89 residues
Representative Sequence	VNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPADAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTA
Number of Associated Samples	109
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.33 %
% of genes from short scaffolds (< 2000 bps)	95.83 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.41% β-sheet: 34.23% Coil/Unstructured: 60.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00441	Acyl-CoA_dh_1	10.83
PF02770	Acyl-CoA_dh_M	3.33
PF03466	LysR_substrate	2.50
PF01593	Amino_oxidase	1.67
PF02771	Acyl-CoA_dh_N	1.67
PF10604	Polyketide_cyc2	1.67
PF01636	APH	0.83
PF14864	Alkyl_sulf_C	0.83
PF03009	GDPD	0.83
PF01717	Meth_synt_2	0.83
PF00132	Hexapep	0.83
PF03403	PAF-AH_p_II	0.83
PF14024	DUF4240	0.83
PF05221	AdoHcyase	0.83
PF07045	DUF1330	0.83
PF06210	DUF1003	0.83
PF03601	Cons_hypoth698	0.83
PF13671	AAA_33	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	15.83
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	0.83
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.83
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.83
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.83
COG4188	Predicted dienelactone hydrolase	General function prediction only [R]	0.83
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.83
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.50 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.50 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.83 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	7.50 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.50 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.83 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Clavibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter	6.67 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	2.50 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.83 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Clavibacter michiganensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	6.67 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	2.50 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.83 %
Streptacidiphilus jeojiense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus jeojiense	0.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Clavibacter michiganensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	6.67 %
Blastococcus sp. TF02-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.67 %
Mycobacterium sp. 1274761.0	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 1274761.0	0.83 %
Streptomyces sp. NTK 937	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NTK 937	0.83 %
Streptomyces sp. MMG1121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MMG1121	0.83 %
Streptacidiphilus jeojiense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus jeojiense	0.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102HVQVO	Not Available	528	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100531009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus jeojiense	935	Open in IMG/M
3300001991\|JGI24743J22301_10064297	Not Available	759	Open in IMG/M
3300002245\|JGIcombinedJ26739_101315384	Not Available	614	Open in IMG/M
3300004479\|Ga0062595_101252635	Not Available	663	Open in IMG/M
3300005093\|Ga0062594_101588018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300005177\|Ga0066690_10931178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	552	Open in IMG/M
3300005340\|Ga0070689_101197666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	682	Open in IMG/M
3300005364\|Ga0070673_101879233	Not Available	568	Open in IMG/M
3300005435\|Ga0070714_100819984	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005435\|Ga0070714_101802885	Not Available	597	Open in IMG/M
3300005436\|Ga0070713_101167255	Not Available	745	Open in IMG/M
3300005437\|Ga0070710_10758603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	690	Open in IMG/M
3300005451\|Ga0066681_10600551	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005457\|Ga0070662_101445658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	593	Open in IMG/M
3300005539\|Ga0068853_101895331	Not Available	578	Open in IMG/M
3300005542\|Ga0070732_10914390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NTK 937	536	Open in IMG/M
3300005543\|Ga0070672_101095732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300005544\|Ga0070686_100960489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	699	Open in IMG/M
3300005578\|Ga0068854_100121262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1985	Open in IMG/M
3300005842\|Ga0068858_102036069	Not Available	568	Open in IMG/M
3300005842\|Ga0068858_102197344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	546	Open in IMG/M
3300005950\|Ga0066787_10016716	Not Available	1227	Open in IMG/M
3300006028\|Ga0070717_11952107	Not Available	529	Open in IMG/M
3300006041\|Ga0075023_100487187	Not Available	552	Open in IMG/M
3300006059\|Ga0075017_101621224	Not Available	511	Open in IMG/M
3300006173\|Ga0070716_100270318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1168	Open in IMG/M
3300006173\|Ga0070716_101859419	Not Available	500	Open in IMG/M
3300006175\|Ga0070712_101249773	Not Available	646	Open in IMG/M
3300006806\|Ga0079220_10022372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2688	Open in IMG/M
3300006806\|Ga0079220_10605300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	780	Open in IMG/M
3300006806\|Ga0079220_11867799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	531	Open in IMG/M
3300006852\|Ga0075433_11692098	Not Available	545	Open in IMG/M
3300007076\|Ga0075435_100409086	Not Available	1168	Open in IMG/M
3300010333\|Ga0134080_10484503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	585	Open in IMG/M
3300010337\|Ga0134062_10812465	Not Available	501	Open in IMG/M
3300010401\|Ga0134121_12534006	Not Available	555	Open in IMG/M
3300012211\|Ga0137377_10752819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300012484\|Ga0157333_1029647	Not Available	538	Open in IMG/M
3300012683\|Ga0137398_10137827	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300012915\|Ga0157302_10367402	Not Available	582	Open in IMG/M
3300012988\|Ga0164306_11593351	Not Available	563	Open in IMG/M
3300014326\|Ga0157380_10553566	Not Available	1129	Open in IMG/M
3300016294\|Ga0182041_11140781	Not Available	709	Open in IMG/M
3300017792\|Ga0163161_10850796	Not Available	770	Open in IMG/M
3300017993\|Ga0187823_10289589	Not Available	566	Open in IMG/M
3300017999\|Ga0187767_10126495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MMG1121	740	Open in IMG/M
3300018482\|Ga0066669_12011099	Not Available	542	Open in IMG/M
3300020582\|Ga0210395_10714795	Not Available	749	Open in IMG/M
3300020582\|Ga0210395_11044393	Not Available	604	Open in IMG/M
3300020583\|Ga0210401_11277388	Not Available	592	Open in IMG/M
3300021180\|Ga0210396_11048568	Not Available	689	Open in IMG/M
3300021402\|Ga0210385_10734627	Not Available	756	Open in IMG/M
3300021403\|Ga0210397_11228313	Not Available	582	Open in IMG/M
3300021432\|Ga0210384_10844157	Not Available	815	Open in IMG/M
3300021474\|Ga0210390_10671816	Not Available	865	Open in IMG/M
3300021478\|Ga0210402_10237618	Not Available	1680	Open in IMG/M
3300021478\|Ga0210402_11083160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. 1274761.0	728	Open in IMG/M
3300021559\|Ga0210409_10792485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	820	Open in IMG/M
3300021560\|Ga0126371_10840428	Not Available	1063	Open in IMG/M
3300021560\|Ga0126371_13062137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	566	Open in IMG/M
3300024254\|Ga0247661_1035942	Not Available	893	Open in IMG/M
3300024290\|Ga0247667_1014124	Not Available	1589	Open in IMG/M
3300025711\|Ga0207696_1164819	Not Available	589	Open in IMG/M
3300025898\|Ga0207692_10055563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2027	Open in IMG/M
3300025901\|Ga0207688_10128161	Not Available	1486	Open in IMG/M
3300025904\|Ga0207647_10130516	Not Available	1477	Open in IMG/M
3300025906\|Ga0207699_10684425	Not Available	750	Open in IMG/M
3300025910\|Ga0207684_11242015	Not Available	615	Open in IMG/M
3300025916\|Ga0207663_10507893	Not Available	937	Open in IMG/M
3300025918\|Ga0207662_10888608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300025924\|Ga0207694_10539690	Not Available	978	Open in IMG/M
3300025928\|Ga0207700_11328852	Not Available	640	Open in IMG/M
3300025929\|Ga0207664_11356880	Not Available	631	Open in IMG/M
3300025935\|Ga0207709_11210755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300025939\|Ga0207665_10057740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2622	Open in IMG/M
3300025941\|Ga0207711_11537321	Not Available	609	Open in IMG/M
3300025941\|Ga0207711_11888382	Not Available	540	Open in IMG/M
3300025986\|Ga0207658_10135538	Not Available	1985	Open in IMG/M
3300026023\|Ga0207677_12010245	Not Available	537	Open in IMG/M
3300026035\|Ga0207703_11734146	Not Available	600	Open in IMG/M
3300026089\|Ga0207648_11007625	Not Available	780	Open in IMG/M
3300026142\|Ga0207698_11153208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300026142\|Ga0207698_11450172	Not Available	701	Open in IMG/M
3300026214\|Ga0209838_1013054	Not Available	1145	Open in IMG/M
3300027725\|Ga0209178_1330813	Not Available	566	Open in IMG/M
3300027775\|Ga0209177_10100392	Not Available	917	Open in IMG/M
3300027884\|Ga0209275_10852539	Not Available	525	Open in IMG/M
3300028146\|Ga0247682_1104206	Not Available	530	Open in IMG/M
3300028819\|Ga0307296_10222259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300028828\|Ga0307312_10896877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300028872\|Ga0307314_10190963	Not Available	612	Open in IMG/M
3300028885\|Ga0307304_10475751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300028906\|Ga0308309_11441124	Not Available	589	Open in IMG/M
3300029943\|Ga0311340_11630018	Not Available	500	Open in IMG/M
3300031544\|Ga0318534_10249253	Not Available	1025	Open in IMG/M
3300031545\|Ga0318541_10318530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	868	Open in IMG/M
3300031573\|Ga0310915_10500390	Not Available	863	Open in IMG/M
3300031713\|Ga0318496_10174291	Not Available	1179	Open in IMG/M
3300031723\|Ga0318493_10276119	Not Available	902	Open in IMG/M
3300031748\|Ga0318492_10186439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300031763\|Ga0318537_10175470	Not Available	798	Open in IMG/M
3300031819\|Ga0318568_10056080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2285	Open in IMG/M
3300031821\|Ga0318567_10152685	Not Available	1278	Open in IMG/M
3300031833\|Ga0310917_10627934	Not Available	729	Open in IMG/M
3300031890\|Ga0306925_11703723	Not Available	608	Open in IMG/M
3300032008\|Ga0318562_10623384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02-9	622	Open in IMG/M
3300032054\|Ga0318570_10252465	Not Available	800	Open in IMG/M
3300032068\|Ga0318553_10525889	Not Available	620	Open in IMG/M
3300032180\|Ga0307471_103927367	Not Available	526	Open in IMG/M
3300032205\|Ga0307472_102484085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300032770\|Ga0335085_10223589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2285	Open in IMG/M
3300032770\|Ga0335085_10539945	Not Available	1323	Open in IMG/M
3300032828\|Ga0335080_10735199	Not Available	1025	Open in IMG/M
3300032896\|Ga0335075_11468702	Not Available	570	Open in IMG/M
3300032954\|Ga0335083_10204518	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300032955\|Ga0335076_11469826	Not Available	568	Open in IMG/M
3300033134\|Ga0335073_11671241	Not Available	603	Open in IMG/M
3300033158\|Ga0335077_10366169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1558	Open in IMG/M
3300034124\|Ga0370483_0294305	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.17%
Host-Associated	Host-Associated	20.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.67%
Plants	Host-Associated → Plants	20.83%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Sediment	Environmental → Aquatic → Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Peat	Environmental → Terrestrial → Peat	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.33%
Loam	Environmental → Terrestrial → Soil → Loam	17.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_09372570	2189573001	Grass Soil	MRYSGNQGRIDREEDVNPLICIRGSASPGHSYPMTPLHVTNTGDSPMEVMFSANPGDAITWLKVSPVEILPGESASIPLTLVVPSNAGPGENYVILTA
INPhiseqgaiiFebDRAFT_1005310091	3300000364	Soil	VNPLICMRGSASPGHSYPMTPLXXKNTGXSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAV
JGI24743J22301_100642971	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVIL
JGIcombinedJ26739_1013153842	3300002245	Forest Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLKVKNAGDSPMEVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSDAGSGEAYMILT
Ga0062595_1012526352	3300004479	Soil	VNPLICMRGSASPGHSYPMTPLSLKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGQAASIPVTLVVPSNAGPGENYVILTAGGTHFDVRFSVGVPPPHECLAAGYK
Ga0062594_1015880182	3300005093	Soil	VNPLICIQGSASPGHSYPMTPLNVKNAGDSPLEVTYSANPAAAMAWLKVSPVEILPGESASIPVTLAVPPDAG
Ga0066690_109311781	3300005177	Soil	MRSSGQSTETDREEDVNPLICIWGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGARFDVRFSVGVPPPRECVAAGYKPPQ
Ga0070689_1011976661	3300005340	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGTH
Ga0070673_1018792331	3300005364	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSN
Ga0070714_1008199842	3300005435	Agricultural Soil	VNPLICIRGSASPGHSYPMTPLHVKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESATIPLTLVVPSNA
Ga0070714_1018028851	3300005435	Agricultural Soil	MRSSGQPTESDREEDVNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVTLVVPSDAGSVEGYVILT
Ga0070713_1011672551	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRSSRAIDGSRPRGNVNPLICIQGTAAPGHSYPMTPLNLKNAGNSPMEITYSANPADGMTWLKVTPVEIPPGASASIPVTLVVPSSAPSGENYVILTAGGAHYDVRFSVGVSP
Ga0070710_107586031	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRSSGQPTETNREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVIL
Ga0066681_106005512	3300005451	Soil	MSSGQPTETNREEDVNPLICIRGSASPGHSYPMTPLNVKNTGDSPMNVTYSANPADAMPWLKVSPVEILPGESASIP
Ga0070662_1014456581	3300005457	Corn Rhizosphere	MRSSGQPTETDREEDVNPLICIQGSASPGHSYPMTPLSVKNAGDSPLEVTYSANPAAAMAWLKVSPVEILPGESASIPVTLAVPPDAGSGENYVILTAGGARFDVRFSVGVSPP
Ga0068853_1018953311	3300005539	Corn Rhizosphere	VNPLICIRGSASPGHSYPMTPLGVKNAGGSPLEVTYSANPAAAMGWLKVSPVEILPGQSASIPVTLAVPAGAGPGENYVILTAGGARFDVRFSVGVAPPPECVAAGYDS
Ga0070732_109143901	3300005542	Surface Soil	MRSSGQPRGTDREEDVNPLICIRGSASPGHSYPMTPLYVRNTGDSPMKVTFSANPGDAMTWLKVSPVEILPGESASIPLTLVVPSNAGPGEDYVILTAGGTHFDVRFSVGV
Ga0070672_1010957322	3300005543	Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGESYVILTAGGAHFDVRFSV
Ga0070686_1009604891	3300005544	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGAHFDVRF
Ga0068854_1001212621	3300005578	Corn Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGA
Ga0068858_1020360692	3300005842	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNAGDSPLEVTYSANPATAMTWLKVSPVEILPGESASIPVTL
Ga0068858_1021973441	3300005842	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILT
Ga0066787_100167163	3300005950	Soil	VNPLICIRGSASPGHSYPMTPLYVRNTGDSPMEVTFSANPGDAMTWLKVCPVEILPGESASISLTLVVPSNAG
Ga0070717_119521071	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LQSGMRSSRAIDGSRPRGNVNPLICIQGTAAPGHSYPMTPLNLKNAGNSPMEITYSANPADGMTWLKVTPVEIPPGASASIPVTLVVPSSAPSGENYVILTAGGAHYDVRFSV
Ga0075023_1004871872	3300006041	Watersheds	VNPLICIRGSASPGRSYPMTPLNVKNTGDSPMEVTYSANPGYAMTWLKVSPVEILPGESASI
Ga0075017_1016212242	3300006059	Watersheds	VFAVWDEEFRTTEGTDREEDVNPLICIRGSASPGHSYPMTPLYVRNTGYSPMEVTFSANPGDALTWLKASPVEILPGESASIPLT
Ga0070716_1002703181	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVT
Ga0070716_1018594191	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VPGNQGRSDCEEDVNPLICIRGSASPGHSYPMTPLHVKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESASIPLTLVVPSNAGPGEAYVILTAGGTRFDVRFS
Ga0070712_1012497731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSN
Ga0079220_100223723	3300006806	Agricultural Soil	VNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVTLVVPSDAGSVEGYVILTAGGAHFDVRF
Ga0079220_106053001	3300006806	Agricultural Soil	VLAVWDEDSGQPTEPDREEDVNPLICIRGSASPGHSYPMTPLHVKNAGDSPVEVTYSANPADAMAWLKVSPVEILPGESVSIPVTLAVPPNAGSGEAYVILTAGGARFDVRFSVGVPPPRECVAAGYKPPQGT
Ga0079220_118677991	3300006806	Agricultural Soil	VNPLICIQGSASPGHTYPMTPLTVKNTGDSPMEVTYSANPGYAMAWLKVSPVEILPGESASIPVTLAVPSNADSGEAYVILTAGGAHFDVRFSVGVSPPR
Ga0075433_116920982	3300006852	Populus Rhizosphere	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESAS
Ga0075435_1004090861	3300007076	Populus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSSNPGYAMTWLKVSPVEILPGESSSIPVTLAVPSNA
Ga0134080_104845032	3300010333	Grasslands Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPQGFVKVAGPI*
Ga0134062_108124651	3300010337	Grasslands Soil	MRSSGQSTETDREEDVNPLICIRGSASPGHSYPMTPLHVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESANIPVTLAVPSNAGSGEAYVI
Ga0134121_125340061	3300010401	Terrestrial Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMQVTYSANPADAMAWLKVSPVEILPGESAENRRASR*
Ga0137377_107528192	3300012211	Vadose Zone Soil	VNPLICIRGSASPGHSYPMTPLHVKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESATIPLTLVVPSNAGPGEDYVILTAGGTRFDVRFSVGVPPPRECLAAGYKPPPGT
Ga0157333_10296471	3300012484	Soil	MSSSWQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGARFDVRFSVGVSPPRE
Ga0137398_101378273	3300012683	Vadose Zone Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPADAMTWLKVSPVEILPGESASIPVTLVVPPNAGSGEDYVILTAGGAHFDVRFSVG
Ga0157302_103674021	3300012915	Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNTGDSPMNVTYSANPADAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGENYVILT
Ga0164306_115933511	3300012988	Soil	MRSSWQPTETDREEDVNPLICVRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPGYAMAWLKVSPVEILPGESASIPVTLVVPSDAGSVEGYVILTAGGAHF
Ga0157380_105535661	3300014326	Switchgrass Rhizosphere	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPAAAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGESYVILT
Ga0182041_111407812	3300016294	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMSWLKISPVEILPGEAATIPVTLVVPSKAGPGESYVILT
Ga0163161_108507962	3300017792	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNAGDSPLEVTYSANPATAMTWLKVSPVEILPGESASI
Ga0187823_102895891	3300017993	Freshwater Sediment	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPADAMMWLKISPVKILPGESASIPVTL
Ga0187767_101264951	3300017999	Tropical Peatland	VNPLICIRGSASPGHSYPMTSLYMRNTGDSPMRITFSVNPGYAATWLKVSPVEILPGESASIPLTLVVPSNA
Ga0066669_120110991	3300018482	Grasslands Soil	VNPLICIWGSASPGHSYPMTPLHVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGARFDVRFSVGVPPPRACVA
Ga0210395_107147951	3300020582	Soil	VNPLICIRGSASPGHSYPMTPLHVKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESATIPLTLVVPSNAG
Ga0210395_110443931	3300020582	Soil	VNPLICIRGSASPGHSYPMTPLNVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPPNAG
Ga0210401_112773881	3300020583	Soil	VNPLICIRGSASPGHSYPMTPLHVKNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESASIPLTLAVPSNAGPGESYVILTAGGTHFDVRFSVGVPAP
Ga0210396_110485683	3300021180	Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMNVTYSANPADAMTWLKVSPAEILPGASASIPVTLVVPSNAGSGESYVILTAGG
Ga0210385_107346272	3300021402	Soil	MRSSGDQGELTDREEDVNPLICIRGSASPGHSYPMTPLYVRNTGDSPMEVTFSANPADAMTWLKVSPVEILPGESASIPLTL
Ga0210397_112283132	3300021403	Soil	MRSSGDQGELTDREEDVNPLICIRGSASPGHSYPMTPLYVRNTGDSPMEVTFSANPADAMTWLKVSPVEILPGESASIPLTLVVPSNAGPGEDYVILTAGGSHFDVR
Ga0210384_108441572	3300021432	Soil	MRSSGQSTETDREEDVNPLICIRGSASPGHSYPMTPLHVKNAGDSPMQVTYSANPGYAMSWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGA
Ga0210390_106718161	3300021474	Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMNVTYSANPADAMTWLKVSPVEILPGESASIPVTLAVPPNAGSGEAYVILTA
Ga0210402_102376181	3300021478	Soil	VNPLICIRGSASPGHSYPMTPLHVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGARFDVRFS
Ga0210402_110831602	3300021478	Soil	VNPLICIRGSASPGHSYPMTPLYVRNTGDSPMEVTFSANPGYAMTWLKVSPVEILPGESATIPVT
Ga0210409_107924851	3300021559	Soil	MRSSGQPTETDREEDVNPLICIRGSASPGHSYPMTPLNVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLA
Ga0126371_108404281	3300021560	Tropical Forest Soil	VNPLICIRGSASPGHSYPMTPLYVKNTGDSPMQVTYSANPGDAMSWLKISPVEILPGEAATIPVTLVVPSKAGPGESYVILTAGGAHFDVRFSVGVAPPQQCVAA
Ga0126371_130621371	3300021560	Tropical Forest Soil	VNPLICIRGSASPGHSYPMTPLSLKNAGDSPMEVTYSANPGDAMSWLKISPVEILPGETASIPVTL
Ga0247661_10359421	3300024254	Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKASPVEILPGESASIPVTLAVPS
Ga0247667_10141241	3300024290	Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVIL
Ga0207696_11648191	3300025711	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPLEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLA
Ga0207692_100555631	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVTLVVPSDAGSVEGYVILTAGGAHFD
Ga0207688_101281611	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGG
Ga0207647_101305161	3300025904	Corn Rhizosphere	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTAGGAH
Ga0207699_106844251	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRFSV
Ga0207684_112420151	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRFSVGVSPPPEC
Ga0207663_105078931	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPADAMTWLKVSPVEILPGESASIPVTLAVPSNAGSGEAYVILTA
Ga0207662_108886082	3300025918	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLHVRNTGDSPMEVTFSANPGDAMTWLKVSPVEILPGESATIP
Ga0207694_105396901	3300025924	Corn Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRFSVGVSPPPECVAAGYK
Ga0207700_113288521	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTHLHVKNAGDSPMQVTYSANPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAGSG
Ga0207664_113568801	3300025929	Agricultural Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPAHAMTWLKVSPVEILPGESASIPVTLVVPSNAGSVEAYVILTAGGAHFDVRFSVGVPPPRECVAAGYK
Ga0207709_112107551	3300025935	Miscanthus Rhizosphere	LQSGKRSSGQPTETDREEDVNPLICIQGSASPGHSYPMTPLNVKNAGDSPLEVTYSANPATAMTWLKVSPVEILPGESASIPVTLAVPPDAGSGENYVILTAGG
Ga0207665_100577401	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSANPANAMTWLKVSPVEILPGESASIPVTLVVPSDAGSVEGYVILTAGGAHFDVRFSVGVPPPRECVAAGYK
Ga0207711_115373211	3300025941	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLGVKNAGGSPLEVTYSANPAAAMGWLKVSPVEILPGQSASIPVTLAVPAGAGPGENYVILTAGGARFDVRFSVGV
Ga0207711_118883821	3300025941	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRFSVGVSP
Ga0207658_101355382	3300025986	Switchgrass Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLA
Ga0207677_120102451	3300026023	Miscanthus Rhizosphere	VNPLICIRGSASPGHSYPMTPLGVKNAGGSPLEVTYSANPAAAMGWLKVSPVEILPGQSASIPVTLAVPAGAGSGENYVILTAGGARFD
Ga0207703_117341461	3300026035	Switchgrass Rhizosphere	VNPLICIQGSASPGHSYPMTPLSVKNTGQSPMQVTYSANPAAAMAWLKVSPVEILPGESASIPVTLAVPPDAGSGENYVILTAGGARFDVRFSVGVSPPAECVAAGYDTSG
Ga0207648_110076251	3300026089	Miscanthus Rhizosphere	VNPLICIQGSASPGHSYPMTPLSVKNTGQSPMQVTYSANPADAMAWLKVSPVEILPGES
Ga0207698_111532081	3300026142	Corn Rhizosphere	VNPLICIRGSASPGHSYPMTPLGVKNAGGSPLEVTYSANPAAAMGWLKVSPVEILPGQSASIPVTLAVPAGAGPGENYVILTAGGARFDVRFSVGVAPPPECVAAGYDSSGGTGS
Ga0207698_114501722	3300026142	Corn Rhizosphere	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRF
Ga0209838_10130541	3300026214	Soil	VNPLICIRGSASPGHSYPMTPLYVRNTGDSPMEVTFSANPGDAMTWLKVCPVEILPGESA
Ga0209178_13308131	3300027725	Agricultural Soil	VNPLICIQGSASPGHTYPMTPLTVKNTGDSPMEVTYSANPGYAMAWLKVSPVEILPGESASIPVTLAVPSNADSGEAY
Ga0209177_101003922	3300027775	Agricultural Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKVSPVEILPGESASIPVTLAVPSNA
Ga0209275_108525391	3300027884	Soil	VNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPADAMTWLKVSPVEILPGESASIPVTLAVPSNA
Ga0247682_11042061	3300028146	Soil	VNPLICIQGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPGYAMTWLKASPVEILPGESASIPVTLAVPS
Ga0307296_102222592	3300028819	Soil	MRSSGQPTETDREEDVTPLICIQGSASPGHSYPMTPLSVKNAGESPMQVTYSANPADAMTWLKISPVEILPGQSASIPVTLAVPPDAGSGENYVILTAGGARFDVRFSVGVAPPQQCVAAGYEP
Ga0307312_108968771	3300028828	Soil	VNPLICIRGSASPGHSYPMTPLGVKNAGESPMQVTYSANPGDAMAWLKVSPVEILAGESASIPVTLAVPPDAGSGENYVILTAGGARFDVRFSVGVAPPQQCVAAGYEPP
Ga0307314_101909631	3300028872	Soil	VNPLICIRGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPAAAMTWLKVSPVEILPGESASIPVTLAVPANAGSGENYVILTAGGAHFDVRFSVGVSPPRECVAAGYKPPQGT
Ga0307304_104757512	3300028885	Soil	MRSSGQPTETDREEDVNPLICIQGSASPGHSYPMTPLSVKNAGESPLQVTYSANPAGAMAWLKVSPVEILPGQSASIPVTLAVPPDAG
Ga0308309_114411241	3300028906	Soil	MRSSRQPRGTDREEDVNPLICIRGSASPGHSYPMTPLYVRNTGDSPMQVTFSANPGDAMTWLKVSPVEILPGESASIPLTLVVPSNAGSGEDYVILTAGGTHFDVRFSVGVSPPRECLA
Ga0311340_116300181	3300029943	Palsa	MNPLICIQGSASPGHSYPMTPLHVKNAGYSPAKVSYAVNPAGAKTWLKVSSMEIPAGKSANVPVTLVVPPQ
Ga0318534_102492532	3300031544	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIPVTLVVPSNAGSGQNYVILTAAGAHFDVRFSVGVPPPPE
Ga0318541_103185302	3300031545	Soil	VNPLICIRGSASPGHSYPMTPLSLKNTGDSPMEVTYSANPGDAMSWLKISPVEILPGETASIPVTLVVPSTAGSGENYVILNAGGAHFDVRFSVGVPPPQECIAA
Ga0310915_105003902	3300031573	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIPVTLVVPSNAGSGQNYVILTAAGAHFDV
Ga0318496_101742912	3300031713	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIPVTLVVPSNAGSGQNYVILTAAGAHFDVRFSVGVPPPPECVAAGYK
Ga0318493_102761191	3300031723	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIPVTLVVPSNAGSGQNYVILTAAGAHFDVRFSVGV
Ga0318492_101864393	3300031748	Soil	VNPLICIRGSASPGHSYPMTPLSLKNTGDSPMEVTYSANPGDAMSWLKISPVEILPGETASIPVTLVV
Ga0318537_101754701	3300031763	Soil	VNPLICIRGSASPGHSYPMTPLSLKNTGDSPMEVTYSANPGDAMSWLKISPVEILPGETA
Ga0318568_100560804	3300031819	Soil	VNPLICIRGSASPGHSYPMTPLSLKNTGDSPMEVTYSANPGDAMSWLKISPVEILPGETASIPVTLVVPSTAGSGENYVILNAGGAH
Ga0318567_101526852	3300031821	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIP
Ga0310917_106279342	3300031833	Soil	VNPLICIRGSASPGHSYPMTPMYLKNTGASPMQVTYSANPGDAMSWLKISPVEILPGEAATIPVTL
Ga0306925_117037231	3300031890	Soil	VNPLICIRGSASPGHSYPMTPLYLKNTGTSPLEVTYSANPGEAMSWLKVSPVEILPGESANIPLTLAVPSNAGP
Ga0318562_106233842	3300032008	Soil	VNPLICIRGSASPGHSYPMTPLSLKNAGNSPMEVTYSANPGDAMSWLKISPVEILPGETASVPVTLVVPSTAGSGENYVILTA
Ga0318570_102524651	3300032054	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGESANIPLTLAVPSNAGPGESYVILTAGGA
Ga0318553_105258892	3300032068	Soil	VNPLICIRGSASPGNSYPMTPLHLKNPGASPLEVTYSANPGDAMAWLKVSPVEILPGETATIPV
Ga0307471_1039273671	3300032180	Hardwood Forest Soil	VNPLICIRGSASPGHSYPMTPLHVSNTGDSPMEVTYSANPGDAMSWLKVSPVEILPGESATIPVTLVVPSNAGPGEDYVILTAGGTRFDVRFSVGVPPPRECLAAGYKPPP
Ga0307472_1024840851	3300032205	Hardwood Forest Soil	VNPLICIQGSASPGHSYPMTPLNVKNAGDSPMEVTYSANPAAAMTWLKVSPVEILPGESASIPVTLAVPSNAHSGEAYVILTAGGAHFDVRF
Ga0335085_102235893	3300032770	Soil	VNPLICIRGSASPGHSYPMASLYVRNTGDSPMEVTFSANPADAMTWLKASPVEILPGESA
Ga0335085_105399451	3300032770	Soil	VNPLICIQGSASPGHSYPMTPLTVKNSGDSPMEVTYSANPGYAMAWLKVSPIEILPGESASIPVTLAVP
Ga0335080_107351991	3300032828	Soil	VNPLICIRGSASPGHSYPMTPLQLKNTGDSPLEVTYSANPGAAMAWLKVSPVEILPGEAATIPVTLVVPSSAGAGENYVILTAAGTHFDVRFSVGVPPPHECVAAGYKAAP
Ga0335075_114687022	3300032896	Soil	METDREDDVNPLICIRGSASPGHSYPMTPLNVKNTGDSAMTVTYSANPADAMPWLKVSPVKILPGESASIPVTLAVPPNAGSGENYVILTAGGARFDVRFSVGV
Ga0335083_102045181	3300032954	Soil	VNPLICIRGSASPGHSYAMTPLSLRNTGDSPMEVTYSANPGAAMAWLKVSPVEILPGEA
Ga0335076_114698262	3300032955	Soil	MRSSGQPTESDREEDVNQLICMRGSASPGHSYPMTPLNVKNTGDSPMEVTYSTNPADAMTWLKVSPVEILPGESASIPLTLVVPSNAGPGENYVILTAGGTHFDVRFSVGVPAPPQCIAA
Ga0335073_116712412	3300033134	Soil	VNPLICIRGSASPGHSYPMTPLNVKNTGDSPLNVTYSANPADAMTWLNVSPAEILPGASASIPVTLVVPSNAGSGESYVILTAGGAHFDVRFSVGVSPPRECVAAGY
Ga0335077_103661691	3300033158	Soil	VNPLICIRGSASPGHSYPMTPLNAKNTGDSPLNVTYSANPADAMTWLKVSPAEILPGASASIPVTLVVPANAGSEESYVILTAGGAHFDVRFSVGVSPPR
Ga0370483_0294305_3_272	3300034124	Untreated Peat Soil	MRSPGNPTEAGHVEDVNPLICIRGSASPGHSYTMTPLLVKNAGNSPTEVTFSVNPGDATTWLKVPAVKIPPGKSAGIPLTLVVPPNARPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073933

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences