Metagenome / Metatranscriptome Family F073926

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073926
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	108 residues
Representative Sequence	GWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNFENLRDGTYTVDATGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Number of Associated Samples	102
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.50 %
% of genes near scaffold ends (potentially truncated)	90.83 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.333 % of family members)
Environment Ontology (ENVO)	Unclassified (44.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.24% β-sheet: 47.76% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00248	Aldo_ket_red	2.50
PF13620	CarboxypepD_reg	2.50
PF01850	PIN	2.50
PF01436	NHL	1.67
PF13517	FG-GAP_3	1.67
PF01839	FG-GAP	1.67
PF09720	Unstab_antitox	0.83
PF13884	Peptidase_S74	0.83
PF00593	TonB_dep_Rec	0.83
PF09286	Pro-kuma_activ	0.83
PF13439	Glyco_transf_4	0.83
PF05598	DUF772	0.83
PF07638	Sigma70_ECF	0.83
PF00069	Pkinase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.33
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	82.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	80.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.67 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.67 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Pasteurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.83 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.67 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.83 %
Pasteurellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.83 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.67 %
Haemophilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus	0.83 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.83 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.67 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.83 %
Megasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera	0.83 %
Haemophilus parainfluenzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus parainfluenzae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.83 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.67 %
Megasphaera micronuciformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera micronuciformis	0.83 %
Cystobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter	0.83 %
Haemophilus parainfluenzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus parainfluenzae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.83 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.67 %
Cystobacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	0.83 %
Megasphaera micronuciformis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera micronuciformis	0.83 %
Haemophilus parainfluenzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus parainfluenzae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02HGOZF	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300000956\|JGI10216J12902_101405226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3666	Open in IMG/M
3300000956\|JGI10216J12902_113201897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300001867\|JGI12627J18819_10248978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300002911\|JGI25390J43892_10177784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera micronuciformis	500	Open in IMG/M
3300004157\|Ga0062590_102197946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus parainfluenzae	578	Open in IMG/M
3300004479\|Ga0062595_102689397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300005171\|Ga0066677_10003870	All Organisms → cellular organisms → Bacteria	5874	Open in IMG/M
3300005174\|Ga0066680_10372376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300005176\|Ga0066679_10383250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300005178\|Ga0066688_10419739	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005178\|Ga0066688_10752806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300005180\|Ga0066685_10803969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300005181\|Ga0066678_10041683	All Organisms → cellular organisms → Bacteria → Proteobacteria	2571	Open in IMG/M
3300005289\|Ga0065704_10746089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300005294\|Ga0065705_10020360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1866	Open in IMG/M
3300005294\|Ga0065705_11044251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005295\|Ga0065707_10029558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300005436\|Ga0070713_102264504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300005445\|Ga0070708_100614243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300005447\|Ga0066689_10745818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	611	Open in IMG/M
3300005454\|Ga0066687_10120582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1351	Open in IMG/M
3300005555\|Ga0066692_10295888	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005555\|Ga0066692_10510936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300005555\|Ga0066692_10993416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300005558\|Ga0066698_10902459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	566	Open in IMG/M
3300005560\|Ga0066670_11034627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300005568\|Ga0066703_10387001	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005569\|Ga0066705_10650957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300005574\|Ga0066694_10242352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	854	Open in IMG/M
3300005575\|Ga0066702_10259027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300005576\|Ga0066708_10426872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300006031\|Ga0066651_10028869	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300006032\|Ga0066696_10402249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300006034\|Ga0066656_10750726	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006173\|Ga0070716_100408947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	978	Open in IMG/M
3300006796\|Ga0066665_10945024	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300009012\|Ga0066710_103078368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300009038\|Ga0099829_10692315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	847	Open in IMG/M
3300009090\|Ga0099827_11212501	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009137\|Ga0066709_100965351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1246	Open in IMG/M
3300009147\|Ga0114129_12726706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300010301\|Ga0134070_10330147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300010303\|Ga0134082_10260004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300010320\|Ga0134109_10051111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1368	Open in IMG/M
3300010321\|Ga0134067_10015134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2254	Open in IMG/M
3300010323\|Ga0134086_10218911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300010333\|Ga0134080_10317309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300010335\|Ga0134063_10218448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300010337\|Ga0134062_10302569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300010337\|Ga0134062_10322180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300010359\|Ga0126376_11839238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300010364\|Ga0134066_10050253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1068	Open in IMG/M
3300010373\|Ga0134128_10980931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300010396\|Ga0134126_12257911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300012198\|Ga0137364_10338036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300012199\|Ga0137383_10122294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1899	Open in IMG/M
3300012201\|Ga0137365_10214802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1436	Open in IMG/M
3300012205\|Ga0137362_11640562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300012206\|Ga0137380_10776830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300012206\|Ga0137380_11567020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012207\|Ga0137381_10053594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3337	Open in IMG/M
3300012208\|Ga0137376_11186948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012209\|Ga0137379_10990978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300012211\|Ga0137377_10689106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	957	Open in IMG/M
3300012211\|Ga0137377_10787732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300012211\|Ga0137377_11033815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300012211\|Ga0137377_11237740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300012285\|Ga0137370_10462667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300012285\|Ga0137370_10768887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300012354\|Ga0137366_10582205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300012355\|Ga0137369_10696447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300012357\|Ga0137384_10580074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	916	Open in IMG/M
3300012912\|Ga0157306_10392392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300012955\|Ga0164298_11240021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012958\|Ga0164299_11361833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012961\|Ga0164302_11595755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300012972\|Ga0134077_10318429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300012977\|Ga0134087_10219903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	858	Open in IMG/M
3300012977\|Ga0134087_10790142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300012986\|Ga0164304_10971974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300013296\|Ga0157374_10466683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1265	Open in IMG/M
3300014497\|Ga0182008_10187907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1047	Open in IMG/M
3300015357\|Ga0134072_10054430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300015358\|Ga0134089_10464814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300015371\|Ga0132258_10197795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4874	Open in IMG/M
3300015374\|Ga0132255_101970335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300017947\|Ga0187785_10147643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300018061\|Ga0184619_10225844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300018072\|Ga0184635_10263453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300018073\|Ga0184624_10363762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300018468\|Ga0066662_11952115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300018482\|Ga0066669_10598967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	966	Open in IMG/M
3300019878\|Ga0193715_1004029	All Organisms → cellular organisms → Bacteria	3180	Open in IMG/M
3300019878\|Ga0193715_1007200	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300019878\|Ga0193715_1091962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300019882\|Ga0193713_1000703	All Organisms → cellular organisms → Bacteria	11174	Open in IMG/M
3300020018\|Ga0193721_1081371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300022756\|Ga0222622_11133741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300022756\|Ga0222622_11386071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300026305\|Ga0209688_1098151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300026310\|Ga0209239_1186253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300026313\|Ga0209761_1273429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300026314\|Ga0209268_1083484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	926	Open in IMG/M
3300026315\|Ga0209686_1002281	All Organisms → cellular organisms → Bacteria	9088	Open in IMG/M
3300026315\|Ga0209686_1084480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300026324\|Ga0209470_1297573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300026334\|Ga0209377_1154476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300026343\|Ga0209159_1104826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1224	Open in IMG/M
3300026523\|Ga0209808_1132999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M
3300026523\|Ga0209808_1159408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300026538\|Ga0209056_10158526	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300026547\|Ga0209156_10324098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300030848\|Ga0075388_11507230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300031122\|Ga0170822_15303020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300031231\|Ga0170824_108878842	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031231\|Ga0170824_109205002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	967	Open in IMG/M
3300031469\|Ga0170819_12831368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300031890\|Ga0306925_10283351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1784	Open in IMG/M
3300032076\|Ga0306924_10227854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2140	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.00%
Host-Associated	Host-Associated	5.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.83%
Plants	Host-Associated → Plants	5.00%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.83%
Sediment	Environmental → Aquatic → Sediment	4.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.17%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_04060970	2065487018	Soil	PNSAVGLVTYTPATGTFHVDLIIRVDGINLHNLRDGTYTVDATGHGTMMWLSGSGVVRQIDFYIVNGGTELKWIQTDPANTIDLSTIGTMTKQ
JGI10216J12902_1014052264	3300000956	Soil	PLSAVGLITYTPATGTFHVDLILRVNGTNLHNLRDGTYTVDASGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
JGI10216J12902_1132018972	3300000956	Soil	GLVTYTPATGTFHVDLILRLNGTNLHNLRDGTYTVDATGHGTMTWLSGSGEVRHIDFYIVNRGAELKWIGTDPAETIELSTIGTMTKQ*
JGI12627J18819_102489782	3300001867	Forest Soil	LAGSFSINDVSGDYVWHAEGWDLGGTNNKPQSVPLSAVGLITYNPATGTFHVDLFLRINGTNFHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTTELSTVGTMTKQ*
JGI25390J43892_101777841	3300002911	Grasslands Soil	WTYGAGGANDKQSVPESAVGLITYTPATGTWHVDLILRQYGTVFENVRDGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTVDLSTSGTMTKQ*
Ga0062590_1021979461	3300004157	Soil	VGLVTFTPATGTVHLDLIVREYGTQFEGVRDGTYTVDATGHGTMTWLSGNGNVRHIDFYIVNGGAELKWIDTDPPGTVVLSSTGTMTKQ*
Ga0062595_1026893971	3300004479	Soil	LSAVGLITYNPATGTFHSELVLRIDGTTFNNIRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTVELSTVGTMTKQ*
Ga0066677_100038708	3300005171	Soil	FSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066680_103723761	3300005174	Soil	SAVGLVTYTPATGTFHVDLILRVDGTNFHNLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066679_103832502	3300005176	Soil	ASARAGSFNINDVSGNYVHGQGWDLGGTKNKPQSVPLSAVGLITYTPATGTFHSDLILRLDGTNFHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0066688_104197392	3300005178	Soil	TPATGTFHSDLILRLYGTNYDNLRDGTYTVDANGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0066688_107528061	3300005178	Soil	SINDVSGNYVWHAEGWDVGQGNSNNHPVPLSAVGLITYTPATGTFHVDLILRVNGTNFENLRDGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTVELSSTGTMTKQ*
Ga0066685_108039692	3300005180	Soil	PATGTFHVDLILRVNGTNFENLRDGTYTVDATGHGTMTWLSGAGDTRQIDFYIVNGGAELKWIDTDPPGTVELSTTGTMTKQ*
Ga0066678_100416832	3300005181	Soil	VSGNYVWHGEGWDYGAGGTNDKQSVPLSAVGLVTYTPTTGTFHSDLILRVYGTNSHNLRDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPGTVELSTSGTMTKQ*
Ga0065704_107460892	3300005289	Switchgrass Rhizosphere	NDKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLHNLRDGTYTVDATGHGTMTWLSGSGSVKHIDFYIVKGGAELKWIGTDPGTVELSTIGTMTKQ*
Ga0065705_100203601	3300005294	Switchgrass Rhizosphere	SSARAGSFSINDVSGNYVWHGEGWDVGGTNGKPTSVPLSAVGLITYTPATGTFHVDLILRSNGTNFENLRDGTYTVDANGHGTMTWLSGSGNIKHIDFYIVNRGAELKWIDTDPPGTVELSSSGTMTKQ*
Ga0065705_110442511	3300005294	Switchgrass Rhizosphere	VWHGDGWTVGQGKNDNNPGPFVPSSAVGLVTFTPATGTVHLDLIVRQYGTQFEGIRDGTYTVDATGHGTMTWSSGSKHIDFYIVNGGAELKWIITDPPGTIQLSSSGTMTKQ*
Ga0065707_100295581	3300005295	Switchgrass Rhizosphere	DVSGNYVWHGEGWDVGGTNGKPTSVPLSAVGLVTYTPATGTFHVDLILRSNGTNFENLRDGTYTVDATGHGTMTWLSGSGATKHIDFYIVNGGAELKWIDTDPPGTVELSSSGTMTKQ*
Ga0070713_1022645041	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ARAGSFSINDVSGKYVWHAQGWDLGGTKTKPESVPLSAVGLITYNPATGTFHSELVLRIDGTTFNNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTVELSTVGTMTKQ*
Ga0070708_1006142432	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FSSSARADYSINDVSGDYVWHAEGWDVGQGNSGNHPVPLSAVGLVTYTPATGTFHVDLILRLNGTNLENLRDGTYTVDATGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTNELSTSGTMTKQ*
Ga0066689_107458181	3300005447	Soil	YVWHAQGWDSGNGSVNYVPFSAVGLVTYTPATGTFHSDLILRLYGTNYDNLRDGTYTVDANGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0066687_101205823	3300005454	Soil	AVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ*
Ga0066692_102958881	3300005555	Soil	SGNYVWHAQGWDSGNGSVNYVPFSAVGLVTYTPATGTFHSDLILRLYGTNYDNLRDGTYTVDANGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0066692_105109361	3300005555	Soil	ARAGSFSINDVSGNYVWHAEGWDLGGTNGKQRVPLSAVGLITYTPATGTFHVDLILRVDGTNLHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTIELSTVGTMTKQQHGHHDDDQPR*
Ga0066692_109934162	3300005555	Soil	MRAVALAVGQGNTDKNPVPISAVGLITYTPATGTFHVDVIVRFNGTNSENLRDGTYTVDATGHGTMTWLSGAGDTRHIDFYIVNGGAELKWIDTDPPRQL*
Ga0066698_109024591	3300005558	Soil	PLSAVGLITYTPATGTFHVDLILRVNGTNFENLRDGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTAELSSTGTMTKQ*
Ga0066670_110346271	3300005560	Soil	SARADFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066703_103870012	3300005568	Soil	SAVGLVTYTPATGTFHSDLILRLYGTNYDNLRDGTYTVDANGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0066705_106509571	3300005569	Soil	SARADFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENVRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066694_102423521	3300005574	Soil	NDVSGNYVWHSQGWDLGGTKNKPQSVPLSAVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDATGHGTMTWLSGSGNVKYIDFYIANGGAELKWIDTDPPGTVELSTTGTMTKQ*
Ga0066702_102590271	3300005575	Soil	SVPLSAVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDATGHGTMMWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ*
Ga0066708_104268722	3300005576	Soil	KQSVPLSAVGLITYTPATGTFHSDLILRVYGTNSHNLRDGTYTVDATGHGTMTWLSGSGNVKYIDFYIANGGAELKWIDTDPPGTVELSTTGTMTKQ*
Ga0066651_100288691	3300006031	Soil	PATGTFHVDLILRVNGTNLENHRDGTYTVDATGRGTMTWLSGTGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066696_104022492	3300006032	Soil	FSTSARAGSFSINDVSGVYVWHAEGWDLGGTNDKQSVPLSAVGLVTYTPATGTFHSDLILRVYGTNSHNLRDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPAGTIELSTSGTFTKQ*
Ga0066656_107507262	3300006034	Soil	LSAVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDANGHGTMTWLSGSGNVKHIDFYIVNRGAELKWIDTDPPGTVELSTIGTMTKQ*
Ga0070716_1004089472	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SARAGSFSINDVSGNYVYHAGSWSLGGTRNKPESVPGSGVGLVTFTPATGTFHIELVVRLNGTNLYPVRDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0066665_109450242	3300006796	Soil	VWDGEGWDVGQGNPDNHLPLGGVGLVTYTPATGTWHVDLFLRVDGTNFHNLRDGTYTVDANGHGTMTWLSGSGNVKHIDFYIVNRGAELKWIDTDPPGTVELSTIGTMTKQ*
Ga0066710_1030783681	3300009012	Grasslands Soil	DFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENVRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0099829_106923151	3300009038	Vadose Zone Soil	SAVGLVTYTPATGTFHVDLILRLNGTNLENLRDGTYTVDATGHGTMTWLSGGGATKHIDFYIVNGGAELKWIDTDPPGTTELSTTGTMTKQ*
Ga0099827_112125011	3300009090	Vadose Zone Soil	YVEFADGWAFGNGVVNFDPVSQVGLVTFTPATGTFHEDLIIRSAGTNLEVHPNGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTVDLSTSSTMTKQ*
Ga0066709_1009653513	3300009137	Grasslands Soil	STSARADYSINDVSGNYVWHGEGWDYGAGGTNDKQSVPLSAVGLVTYTPATGTWHVDLFLRAYGTNFENVRDGTYTVDANGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTVELSTSGTMTKQ*
Ga0114129_127267062	3300009147	Populus Rhizosphere	VTFTPATGTVHLDLIVRQYGTQFEGVRDGTYTVDATGHGTMTWLSGSGASKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134070_103301471	3300010301	Grasslands Soil	GTFHVDLILRANGTNFENIRDSTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134082_102600041	3300010303	Grasslands Soil	INDVSGNYVWHGQGWDLGGTNNKPESVPLSAVGLITYNPATGTFHVDLILRSDGTNFHNLRDGTYAVDATGHGTMTWLSGSGNIKQIDFYIVKGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0134109_100511111	3300010320	Grasslands Soil	GWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNFENLRDGTYTVDATGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134067_100151342	3300010321	Grasslands Soil	FSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGIITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134086_102189111	3300010323	Grasslands Soil	LITYTPATGTFHSDLFLRINGTQFHNIRDGTYTVDANGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTVELSTIGTMTKQ*
Ga0134080_103173092	3300010333	Grasslands Soil	VGLITYTPATGTFHVDLNVRFNGENSENLRDGTYTVDATGNGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134063_102184482	3300010335	Grasslands Soil	SGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHSDLFLRINGTQFHNLRDGTYTVDANGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134062_103025692	3300010337	Grasslands Soil	SGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHSDLFLRINGTQFHNLRDGTYTVDANGHGTMAWTGVNGAKHRDFYIVNGGAELKWINTDPPGTIVVSNSGTMTKQ*
Ga0134062_103221801	3300010337	Grasslands Soil	INDVSGDYVWHAEGWDVGQGNSGNHPIPLSAVGLVTYTPATGTFHVDLILRLNGTNLENLRDGTYTVDPTGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0126376_118392381	3300010359	Tropical Forest Soil	GTFHVDLILRSDGTSFNNVRDGTYTVDANGHGTMTWLSGSGATKQIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134066_100502532	3300010364	Grasslands Soil	VSGNYVWHAQGWDVVQGNSDNHPVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPDTVELSTTGTMTKQ*
Ga0134128_109809312	3300010373	Terrestrial Soil	FHGDGWTVGQGKNDNNPGPFVPSSAVGLVTFTPTTGTVHLDLIVRQYGTTFEGVRDGTYTVDASGHGTVTWSSGLKHIDFYIVNGGAELKWINTDPPGTIQLSNSGTMTKQ*
Ga0134126_122579112	3300010396	Terrestrial Soil	SARAGSFSINDVSGNYVFHGDGWTVGQGKNDNNPGPFVPSSAVGLVTFTPTTGTVHLDLIVRQYGTTFEGVRDGTYTVDASGHGTVTWSSGLKHIDFYIVNGGAELKWINTDPPGTIQLSNSGTMTKQ*
Ga0137364_103380361	3300012198	Vadose Zone Soil	MRAVAWAVGQGNTDKNPVPISAVGLITYTPATGTFHVDLILRGYGTNSENLRDGTYTVDATGHGTMTWLSGGGATRHIDFYVVNRGAELKWIDTDPPGTFELSAFGTMTKQ*
Ga0137383_101222942	3300012199	Vadose Zone Soil	TDKNPVPISAVGLITYTPATGTFHVDLNVRFNGTNSENLRDGTYTVDATDHGTMTWLSGSGNIKHIDFYIVNGGAELKWINTDPPGTVALSSIGTMTKQ*
Ga0137365_102148023	3300012201	Vadose Zone Soil	SINDVSGNYVWHSEGWAVGQGNSDKIVPVTDVGLITYTPATGTFHVDLFLRFNGTNFENVRDGTYTVDATGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTVALSSIGTMTKQ
Ga0137362_116405621	3300012205	Vadose Zone Soil	AQGWLLGVGGTNDKQSVPFSAVGLITFTPATGTFHADVVSREYATNLHPVFDGTYTVDATGHGTMTWLSAANNTKHRDFYIVNGGAELKWVNTDPPGTVVVSSSGTLTKQ*
Ga0137380_107768301	3300012206	Vadose Zone Soil	NDKQSVPESAVGLVTYTPATGTFHVDLFLRQYGTVFENVRDGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTVDLSAFGTMTKQ*
Ga0137380_115670201	3300012206	Vadose Zone Soil	SVPLTAFGLVTFTPATGTVHIALILRLYGTSGEDVRDGTYTVDATGHGTMTWLSVSGNVKHYDFYIVNGGAELKWINTDPPGTIALSVSGTMAKQ*
Ga0137381_100535941	3300012207	Vadose Zone Soil	SDKIVPISAVGLITYTPATGTFHVDLNVRINGENSENLRDGTYTVDATGHGTMTWLTLGGATRHIDFYIVNGGAELKWIDTDPPGSFELSAIGTMTKQ*
Ga0137376_111869482	3300012208	Vadose Zone Soil	MRAVALAVGQGNTDKNPVPISAVGLITYTPATGTFHVDLNVRFNGENSENLRDGTYTVDATGHGTMTWLSGSGNTKHLDFYIVNRGAELKWIDTDPPGTVELSTTGTMTKQ*
Ga0137379_109909782	3300012209	Vadose Zone Soil	GLITYTPATGTFHVDLILRLNGTNFENLRDGTYTVDANGHGTMTWLSGGGDTRHIDFYIVNGGAELKWIDTDPPPTVELSSFGTMTKQ*
Ga0137377_106891062	3300012211	Vadose Zone Soil	PFSAVGLVTYTPATGTFHSDLILRLYGTNYDNLRDGTYTVDANGHGTMTWLSGGGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0137377_107877321	3300012211	Vadose Zone Soil	AFSSSARADYSINDVSGVYVFHAEGWTYGTGGTNDKHSVPLSAVGLVTFTPATGTVHIALVLSVYGTRGEDVRDGTYTVDATGHGSMTWLSGSGNVKHYDFYIVNGGAELKWIDTDPPRHR*
Ga0137377_110338151	3300012211	Vadose Zone Soil	VPISAVGLITYTPATGTFHVDLNVRINGENSENLRDGTYTVDATGHGTMTWLSGAGDTRHIDFYIVNGGAELKWIDTDPPGSFELSAIGTMTKQ*
Ga0137377_112377401	3300012211	Vadose Zone Soil	GNSGNHPVPLSAVGLITYTPATGTFHVDLILRLNGTNFENLRDGTYTVDANGHGTMTWLTGGGATRHFDFYIVNGGAELKWIDTDPPPTVELSSFGTMTKQ*
Ga0137370_104626671	3300012285	Vadose Zone Soil	KQSVPESAVGLITYTPATGTWHVDLILRQYGTGFENVRDGTYTVDANGHGTMTWLSGSGNTRQIDFYIVNGGAELKWIDTDPPGTVELSAIGTMTKQ*
Ga0137370_107688872	3300012285	Vadose Zone Soil	AEGWAVGQGSTDNHPVPISAVGLITYTPATGTFHVDLNVRFNGENSENLRDGTYTVDATGHGTMTWLSGSGNTKHIDFYIVNGGAELKWIDTDPPGTVDLSTSGTMTKQ*
Ga0137366_105822051	3300012354	Vadose Zone Soil	GQGNSDKIVPVSDVGLVTYTPATGTWHVDLFLRVNGTNFENVRDGTYTVDANGHGTMTWLSGGGDTRHIDFYIVNGGAELKWIDTDPPGTVALSSIGTMTKQ*
Ga0137369_106964471	3300012355	Vadose Zone Soil	MRAVALAVDQGNTDNHPVPISAVGLITYTPATGTFHVDVIVRFNGENSENLRDGTYTVDATGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTIELSTSGTMTKQ*
Ga0137384_105800742	3300012357	Vadose Zone Soil	EGWDLGGTNDKQSVPLSAVGLVTYTPATGTFHVDLILRVYGTNSHNLRDGTYTVDATGHGTMTWLSGSGNIKHIDFYIVNGGAELKWIDTDPPGTVELSSIGTMTKQ*
Ga0157306_103923922	3300012912	Soil	VSRNYVWHGQGWDLGGTHNKPQSVPLSAVGLITYTPATGTFHSDLILRIDGTNFNNVRDGTYTVDATGHGTMTWLSGSVVRQIDFYIVNGGAELKWIITDPPATHVIASNSGTMTRQ*
Ga0164298_112400212	3300012955	Soil	WHAQGWDLGGTNHKPQSAPLSAVGLITYTPATGTFHVDLILRIDGTNFHNLRDGTYTVDATGHGTMTWLSGGGNVKQIDFYIVNGGAELKWIDTDPPGTIELSSSGTMTKQ*
Ga0164299_113618331	3300012958	Soil	NDNNPGPFVPSSAVGLVTFTPATGTVHLDLIVRQYGTQFEGIRDGTYTVDATGHGTLTWSSGSKHFDFYIVNGGAELKWIITDPPGTIQLSSSGTMTKQ*
Ga0164302_115957552	3300012961	Soil	KNDNNPGPFVPSSAVGLVTFTPATGTVHLDLIVRQYGTQFEGVRDGTYTVDATGHGTMTWLSGSGNIKHIDFYILNGGTELKWIITDPPGTIQLSSSGTMTKQ*
Ga0134077_103184292	3300012972	Grasslands Soil	YSINDVSGDYVWHGEGWDVGQGNPDNHLPLSGVGLVTYTPATGTWHVDLFLRVDGTNFHNLRDGTYTVDANGHGTMTWLSGSGNVKHIDFYIVNRGAELKWIDTDPPGTVELSTSGTMTKQ*
Ga0134087_102199031	3300012977	Grasslands Soil	INDVSGTYVWHAQGWDSGGSNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGGGATRHVDFYVVNRGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134087_107901421	3300012977	Grasslands Soil	GLITYTPATGTFHSDLILRLDGTNFHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ*
Ga0164304_109719741	3300012986	Soil	TYALGGTKLDKQFVPLSDVGLVTFTPATGTVHLDLIVREYGTQFEGVGDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPGTVVLSSSGTMTKQ*
Ga0157374_104666831	3300013296	Miscanthus Rhizosphere	TTGTVHLDLIVRQYGTTFEGVRDGTYTVDASGHGTVTWSSGLKHIDFYIVNGGAELKWINTDPPGTIQLSNSGTMTKQ*
Ga0182008_101879072	3300014497	Rhizosphere	LRLPFRAAPGADYSINDVSGVYVWHAEGWDVGGTHGKPTSVPLSAVGLITYTPATGTFHSDLILRQYGTNFENVRDGTYTVDTNGHGTMTWLSGSGNTKHLDFYIVNRGAELRWIDTDPPGTVELSTTGTMTKQ*
Ga0134072_100544301	3300015357	Grasslands Soil	EGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ*
Ga0134089_104648142	3300015358	Grasslands Soil	LSAVGLVTFTPATGTFHVDLILRAYGTNYDNVRDGTYTVNPDGHGTMTWLSGGGLTKHIDFHIVNGGAELKFINTDPPGTNEISTGGTMTKQ*
Ga0132258_101977951	3300015371	Arabidopsis Rhizosphere	RASSFSINDVSGVYVFHGDGWTVGQGKNDNHPGPFVPSSAVGLVTFTPATGTVHVDLIVRQYGTQFEGVRDGTYTVDATGHGTLTWSSGSKHFDFYIVNGGAELKWINTDPPGTIQLSNSGTMTKQ*
Ga0132255_1019703352	3300015374	Arabidopsis Rhizosphere	GTKLDKQFVPLSDVGLVTFTPATGTVHLDLIVRQYGTQVEGVRDGTYTVDATGHGTLTWSSGLKHFDFYIVNGGAELKWINTDPPGTIQLSISGTMTKQ*
Ga0187785_101476432	3300017947	Tropical Peatland	LGGAKNKPESVPGSGVGLVTFTPATGTFHIELVVRLDGTNLYPVKDGTYTVDATGHGTMTWLSGTVVRQIDFYIVNGGAELKWIQTDPANPDDLSTIGTMTKQ
Ga0184619_102258442	3300018061	Groundwater Sediment	STNARAASGSYSVNDVSGNYVWHAAGWDSGNGSVNYVPLSAVGLVTYTPATGTFHVDLILRLSGTNLHNLRDGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPGTVELSTTGTFTKQ
Ga0184635_102634531	3300018072	Groundwater Sediment	SGNYVWHSQGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVDGTNSHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTVELSSSGTMTKQ
Ga0184624_103637621	3300018073	Groundwater Sediment	GWTYALGGTKLDKQFVPLSDVGLVTFTPATGTVHLDLIVREYGTQFEGVRDGTYTVDANGHGTMTFLSPEGNTKQFDFYIVNGGAELKWIDTDPPGTVVLSSTGTMTKQ
Ga0066662_119521151	3300018468	Grasslands Soil	HAEGRDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0066669_105989672	3300018482	Grasslands Soil	ADFSINDVSGNYVWHGQGWDLGGTNGKQSVPLSAVGLITYNPATGTFHVDLILRVNGTNFENLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0193715_10040291	3300019878	Soil	LITYYPATGTFHVDLILRSDGTNLHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVEGGAKLKWIDTDPPGTIELSTVGTMTKQ
Ga0193715_10072001	3300019878	Soil	VHGPIIASTTYRETTFGTPKGGTVGGTNGKPTSVPLSAVGLITYTPATGTFHVDLILRSNGTNFENLRDGSYTVDATGHGTMTWLSGGSLTKHIDFYIVNGGAELKWIDTDPPGTVELSTTGTMTKQ
Ga0193715_10919621	3300019878	Soil	QQSVPESSVGLVTFTPATGTFHMELIVRQYGIVFGGPRDGTYTVAANGHGTMTWLSGSGNTKHRDFYIVNGGAELKFINTDPPGTVELSTSGTMTKQ
Ga0193713_10007035	3300019882	Soil	LSAVGLITYTPATGTFHVDLILRSNGTNFENLRDGSYTVDATGHGTMTWLSGGSLTKHIDFYIVNGGAELKWIDTDPPGTVELSTTGTMTKQ
Ga0193721_10813712	3300020018	Soil	NDVSGVYVWHAEGWDVGQGNSGNHPVPLSAVGLVTYTPATGTFHVDLILRLNGTNLENLRDGTYTVDATGHGTMTWLSGGSLTKHIDFYIVNGGAELKWIDTDPPGTVELSTTGTMTKQ
Ga0222622_111337411	3300022756	Groundwater Sediment	GQGWDLGGANGKQSVPLSAVGLITYTPATGTFHVDLILRSNGTNFENVRDGTYTVDATGHGTMTWLSGSGSVKQIDFYIVNRGAELKWIDTDPLGTIELSAVGTMTKQ
Ga0222622_113860711	3300022756	Groundwater Sediment	GNYVWHAKGWDVGGTHSKPTSVPFSVVGLITYTPATGTFHSDLILRLNGTNFETLHDGTYTVDANGHGTMTFLSPEGNTKQFDFYIVNGGAELKWINTDPPAPLS
Ga0209688_10981511	3300026305	Soil	GWDLGGTKNKPQSVPLSAVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDATGHGTMMWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0209239_11862532	3300026310	Grasslands Soil	WTYGAGGANDKQSVPESAVGLITYTPATGTWHVDLILRQYGTVFENVRDGTYTVDANGHGTMTWLSGSGNTKQIDFYIVNGGAELKWIDTDPPGTVDLSTSGTMTKQ
Ga0209761_12734291	3300026313	Grasslands Soil	SINDVSGVYVWHGEGWDVGQGNPDNHLPLSGVGLVTYTPATGTWHVDLFLRVDGTNFHNLRDGTYTVDANGHGTMTWLSGSGATKHIDFYIVNGGAELKWIDTDPGTIELSTIGTMTKQ
Ga0209268_10834841	3300026314	Soil	STSARAGSFSINDVSGNYVWHAQGWDVVQGNSDNHPVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0209686_100228110	3300026315	Soil	GSFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0209686_10844801	3300026315	Soil	SVPLSAVGLITYTPATGTFHVDLILRSDGTNFHNLRDGTYTVDATGHGTMMWLSGSGNVKQIDFYIVNGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0209470_12975732	3300026324	Soil	LPLSGVGLVTYTPATGTWHVDLFLRVDGTNFHNLRDGTYTVDANGHGTMTWLSGSGNVKHIDFYIVNRGAELKWIDTDPPGTVELSTIGTMTKQ
Ga0209377_11544761	3300026334	Soil	FSINDVSGNYVWHAEGWDLGGTNGKQRVPLSAVGLITYTPATGTFHVDLILRVDGTNLHNLRDGTYTVDATGHGTMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTIELSTVGTMTKQQHGHHDDDQPR
Ga0209159_11048262	3300026343	Soil	GNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSSSGTMIKQ
Ga0209808_11329991	3300026523	Soil	WADFSINDVSGVYVWHAEGWGVGQGNSGKIVPISAVGLITYTPATGTFHVDLNVRFNGENSENLRDGTYTVDATGHGTMTWLSGAGDTRHIDFYIVNSGAELKWIDTDPPGSFELSAIGTMTKQ
Ga0209808_11594081	3300026523	Soil	SARAGSFSINDVSGNYVWHGQGWDLGGTNNKPESVPLSAVGLITYNPATGTFHVDLILRSDGTNFHNLRDGTYAVDATGHGTMTWLSGSGNIKQIDFYIVKGGAELKWIDTDPPGTIELSTVGTMTKQ
Ga0209056_101585263	3300026538	Soil	DFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0209156_103240981	3300026547	Soil	SSSARADFSINDVSGNYVWHAEGWDLGGTNGKQSVPLSAVGLITYTPATGTFHVDLILRVNGTNLENLRDGTYTVDATGHGTMTWLSGSGLTKHIDFYIVNGGAELKWIDTDPPGTIELSTIGTMTKQ
Ga0075388_115072301	3300030848	Soil	VGLVTFTPATGAVHLDLIVREYGTQFEGVADGTYTVDATGHGTMTWLSGSGNVKHIDFYIVNGGAELKWIDTDPPGTVLLSSSGTMTKQ
Ga0170822_153030201	3300031122	Forest Soil	GNYVWHAQGWDLGGTNHKPQSAPLSAVGLITYTPATGTFHEDLIVRNGGINKQLHFDGTYTVDANGHGTMTWLNGAKQRDFYIVNGGAELKWIITDPPGTHVIASNSGTMTKQRHNEE
Ga0170824_1088788422	3300031231	Forest Soil	ANNNINNTVPFSVVGLVTFTPGTGTFHGDWMGRQYGTNGEAVHDGTYTVDANGHGTMSWLSANGNAKHRDFYIVNGGAQLKYIDTDPPGTILVSDSGTMTKQ
Ga0170824_1092050021	3300031231	Forest Soil	NGKPTSVPLSAVGLVTYTPATGTFHVDLILRSNGTNFENVRDGTYTVDATGHGMMTWLSGSGNVKQIDFYIVKGGAELKWIDTDPPGTVELSSTGTMTKQ
Ga0170819_128313681	3300031469	Forest Soil	QSVPFSVVGLITYTPATGTFHCDLIQRLDGTNFETPHDGTYTVDANGHGTMTFLSPEGNTKHFDFYIVNGGAELKWINTDPPGTFELSSFGTMTKQ
Ga0306925_102833511	3300031890	Soil	FVGLVTFTPATGTFHGDWIARQYGTNGEAVHDGTYTVDADGHGTMTWISVSGNVKHADFYIVNGGAELKYINTDPPGTIVVSYSGTMTKQ
Ga0306924_102278541	3300032076	Soil	SVPFSFVGLVTFTPATGTFHGDWIARQYGTNGEAVHDGTYTVDADGHGTMTWISVSGNVKHADFYIVNGGAELKYINTDPPGTIVVSYSGTMTKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073926

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences