Metagenome / Metatranscriptome Family F073829

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F073829
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	89 residues
Representative Sequence	MTLHKFVIGQAVDFNSRLPAVSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQTAAALWADPVSGRSLPRPFRSR
Number of Associated Samples	101
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.07 %
% of genes near scaffold ends (potentially truncated)	34.17 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.500 % of family members)
Environment Ontology (ENVO)	Unclassified (21.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.92% β-sheet: 19.67% Coil/Unstructured: 75.41%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00313	CSD	33.33
PF00487	FA_desaturase	15.00
PF04402	SIMPL	10.00
PF01715	IPPT	0.83
PF14196	ATC_hydrolase	0.83
PF01135	PCMT	0.83
PF01551	Peptidase_M23	0.83
PF02371	Transposase_20	0.83
PF08450	SGL	0.83
PF00211	Guanylate_cyc	0.83
PF02113	Peptidase_S13	0.83
PF07811	TadE	0.83
PF08282	Hydrolase_3	0.83
PF10041	DUF2277	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	15.00
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	15.00
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	10.00
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	10.00
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	10.00
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.83
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.83
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.83
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.83
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	0.83
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.83
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.83
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.83
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.83
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.50 %
Unclassified	root	N/A	42.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.33 %
Unclassified	root	N/A	42.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.17 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	36.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	15.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.67 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %
Salinarimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.83 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	15.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.83 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.83 %
Salinarimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	15.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.67 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.83 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.83 %
Salinarimonas rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas rosea	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.50 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	15.83 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.67 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.83 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.83 %
Salinarimonas rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas rosea	0.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10000509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12632	Open in IMG/M
3300002245\|JGIcombinedJ26739_101158616	Not Available	661	Open in IMG/M
3300004082\|Ga0062384_100843893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	644	Open in IMG/M
3300004082\|Ga0062384_101101807	Not Available	573	Open in IMG/M
3300004082\|Ga0062384_101318308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	529	Open in IMG/M
3300004091\|Ga0062387_100751001	Not Available	721	Open in IMG/M
3300004091\|Ga0062387_101757811	Not Available	505	Open in IMG/M
3300004092\|Ga0062389_104032524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas rosea	552	Open in IMG/M
3300004121\|Ga0058882_1010288	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005327\|Ga0070658_10879751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	779	Open in IMG/M
3300005434\|Ga0070709_11157877	Not Available	620	Open in IMG/M
3300005435\|Ga0070714_101843629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	590	Open in IMG/M
3300005437\|Ga0070710_11189281	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005439\|Ga0070711_100528338	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005439\|Ga0070711_101172454	Not Available	664	Open in IMG/M
3300005534\|Ga0070735_10230195	Not Available	1128	Open in IMG/M
3300005539\|Ga0068853_100957432	Not Available	823	Open in IMG/M
3300005610\|Ga0070763_10051784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1955	Open in IMG/M
3300005614\|Ga0068856_100549542	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300005712\|Ga0070764_10170204	Not Available	1207	Open in IMG/M
3300006052\|Ga0075029_101312140	Not Available	508	Open in IMG/M
3300006059\|Ga0075017_100352167	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300006175\|Ga0070712_101981145	Not Available	510	Open in IMG/M
3300006176\|Ga0070765_101281308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	691	Open in IMG/M
3300009093\|Ga0105240_10049542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5301	Open in IMG/M
3300009093\|Ga0105240_10252433	Not Available	2039	Open in IMG/M
3300009093\|Ga0105240_10737425	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300009545\|Ga0105237_10583859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1124	Open in IMG/M
3300009633\|Ga0116129_1016406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2685	Open in IMG/M
3300009826\|Ga0123355_10591519	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300010049\|Ga0123356_10219823	Not Available	1955	Open in IMG/M
3300010376\|Ga0126381_101038631	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	1183	Open in IMG/M
3300010379\|Ga0136449_103860126	Not Available	563	Open in IMG/M
3300010880\|Ga0126350_12278511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1404	Open in IMG/M
3300011404\|Ga0153951_1027979	Not Available	966	Open in IMG/M
3300011418\|Ga0153954_1003055	All Organisms → cellular organisms → Bacteria → Proteobacteria	6875	Open in IMG/M
3300012154\|Ga0153953_1013136	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300013105\|Ga0157369_12530443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	519	Open in IMG/M
3300016294\|Ga0182041_10694475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	902	Open in IMG/M
3300016445\|Ga0182038_10171800	Not Available	1678	Open in IMG/M
3300017966\|Ga0187776_10520508	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300017972\|Ga0187781_10476588	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300017972\|Ga0187781_10626850	Not Available	776	Open in IMG/M
3300017975\|Ga0187782_10325600	Not Available	1161	Open in IMG/M
3300017994\|Ga0187822_10016893	Not Available	1828	Open in IMG/M
3300018058\|Ga0187766_10339402	Not Available	981	Open in IMG/M
3300018062\|Ga0187784_11322795	Not Available	571	Open in IMG/M
3300018468\|Ga0066662_11037561	Not Available	815	Open in IMG/M
3300020579\|Ga0210407_10874269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	690	Open in IMG/M
3300020582\|Ga0210395_10065034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2676	Open in IMG/M
3300020582\|Ga0210395_10967303	Not Available	631	Open in IMG/M
3300021171\|Ga0210405_10346522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1172	Open in IMG/M
3300021181\|Ga0210388_10568824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	993	Open in IMG/M
3300021372\|Ga0213877_10217251	Not Available	626	Open in IMG/M
3300021405\|Ga0210387_10869143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	794	Open in IMG/M
3300021420\|Ga0210394_11331341	Not Available	613	Open in IMG/M
3300021474\|Ga0210390_11656043	Not Available	502	Open in IMG/M
3300021477\|Ga0210398_10609865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	886	Open in IMG/M
3300021479\|Ga0210410_10646878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	936	Open in IMG/M
3300022527\|Ga0242664_1052597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	748	Open in IMG/M
3300022528\|Ga0242669_1022490	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300025463\|Ga0208193_1073690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	696	Open in IMG/M
3300025504\|Ga0208356_1031207	Not Available	1110	Open in IMG/M
3300025627\|Ga0208220_1149220	Not Available	596	Open in IMG/M
3300025633\|Ga0208480_1000903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11040	Open in IMG/M
3300025913\|Ga0207695_10037269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5247	Open in IMG/M
3300025913\|Ga0207695_10803269	Not Available	821	Open in IMG/M
3300025914\|Ga0207671_10569911	Not Available	903	Open in IMG/M
3300025916\|Ga0207663_10187649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1482	Open in IMG/M
3300027117\|Ga0209732_1035497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	860	Open in IMG/M
3300027117\|Ga0209732_1049309	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300027432\|Ga0209421_1038928	Not Available	938	Open in IMG/M
3300027496\|Ga0208987_1037524	Not Available	859	Open in IMG/M
3300027729\|Ga0209248_10127975	Not Available	761	Open in IMG/M
3300027783\|Ga0209448_10162406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	745	Open in IMG/M
3300027795\|Ga0209139_10047309	Not Available	1511	Open in IMG/M
3300027908\|Ga0209006_10070678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3112	Open in IMG/M
3300027908\|Ga0209006_10248948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1529	Open in IMG/M
3300028789\|Ga0302232_10378150	Not Available	697	Open in IMG/M
3300030007\|Ga0311338_11444279	Not Available	638	Open in IMG/M
3300030839\|Ga0073999_10010885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300030949\|Ga0074031_1943382	Not Available	852	Open in IMG/M
3300031057\|Ga0170834_105391558	Not Available	505	Open in IMG/M
3300031682\|Ga0318560_10261875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300031715\|Ga0307476_10095482	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300031718\|Ga0307474_10238834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1390	Open in IMG/M
3300031718\|Ga0307474_10313389	Not Available	1210	Open in IMG/M
3300031719\|Ga0306917_10492044	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300031744\|Ga0306918_10240436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300031747\|Ga0318502_10585750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	671	Open in IMG/M
3300031771\|Ga0318546_10782110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	672	Open in IMG/M
3300031777\|Ga0318543_10069101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1477	Open in IMG/M
3300031799\|Ga0318565_10538204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300031799\|Ga0318565_10643812	Not Available	509	Open in IMG/M
3300031823\|Ga0307478_10683350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	860	Open in IMG/M
3300031831\|Ga0318564_10184906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	929	Open in IMG/M
3300031897\|Ga0318520_10731152	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300031941\|Ga0310912_10774491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	742	Open in IMG/M
3300032044\|Ga0318558_10523528	Not Available	592	Open in IMG/M
3300032059\|Ga0318533_10504592	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300032160\|Ga0311301_12589577	Not Available	563	Open in IMG/M
3300032515\|Ga0348332_10585883	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300032783\|Ga0335079_11028078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	839	Open in IMG/M
3300032805\|Ga0335078_12603272	Not Available	519	Open in IMG/M
3300032829\|Ga0335070_10465532	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300032893\|Ga0335069_10657610	Not Available	1196	Open in IMG/M
3300032895\|Ga0335074_10039241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6599	Open in IMG/M
3300032895\|Ga0335074_10229572	Not Available	2215	Open in IMG/M
3300032895\|Ga0335074_10724837	Not Available	950	Open in IMG/M
3300032896\|Ga0335075_10142846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3008	Open in IMG/M
3300032896\|Ga0335075_10211047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2302	Open in IMG/M
3300032898\|Ga0335072_10901905	Not Available	827	Open in IMG/M
3300033134\|Ga0335073_10009326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	13771	Open in IMG/M
3300033134\|Ga0335073_10028431	All Organisms → cellular organisms → Bacteria → Proteobacteria	7703	Open in IMG/M
3300033134\|Ga0335073_10441568	Not Available	1507	Open in IMG/M
3300033289\|Ga0310914_10657045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	943	Open in IMG/M
3300033290\|Ga0318519_10926127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.83%
Host-Associated	Host-Associated	14.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.17%
Aquatic	Environmental → Aquatic	11.67%
Plants	Host-Associated → Plants	10.00%
Fungi	Host-Associated → Fungi	2.50%
Arthropoda	Host-Associated → Arthropoda	1.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.67%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Mycelium	Host-Associated → Fungi → Mycelium	2.50%
Sediment	Environmental → Aquatic → Sediment	1.67%
Peat	Environmental → Terrestrial → Peat	1.67%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.67%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.50%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.67%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.50%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.50%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.67%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012154	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100005096	3300001546	Forest Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVELPPSQQAAAAVWADPLPGRWLPRPARSR*
JGIcombinedJ26739_1011586161	3300002245	Forest Soil	MTPHKFVIGQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKAELFSRAAKEIDLVAVDLPPSEQATAAVWADPVSGRWLPRPSRSR*
Ga0062384_1008438932	3300004082	Bog Forest Soil	MTSKFVVGQAVNFSKKYPWMSGGPYEVVSVLPPDQDDSTTYRVKSQVEPFARAANEADLIAVGLAPVRQTAPVLWADLLSQRSGPTRSR*
Ga0062384_1011018071	3300004082	Bog Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLAPSEQAPPALWADPVSGRRSPRP
Ga0062384_1013183082	3300004082	Bog Forest Soil	IGQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKTELFSRAVKEIDLVAIDLPPSEQAAAAVWADSVSGRWLPRPFRSR*
Ga0062387_1007510012	3300004091	Bog Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLAPSEQAPPALWADPVSGRRSPRPLR*
Ga0062387_1017578112	3300004091	Bog Forest Soil	VDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSQAEPFARAVRETDLVAVGLAPSEQAAPAHWADPVSGRGSSRPLRSR*
Ga0062389_1040325241	3300004092	Bog Forest Soil	MMTSKFVVGQAVNFSKKYPWMSGGPYEVVSVLPPDRDDSTTYRVKSQVEPFARAANEADLIAVDLAPVGQTAPVGWADLLSQRSGPTRSR*
Ga0058882_10102882	3300004121	Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVSGRRSPRP
Ga0070658_108797512	3300005327	Corn Rhizosphere	AVGFNKKLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGSAAPAGAPAPVRWADLLSQPTGPIRSR*
Ga0070709_111578771	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMTFPKFVIGQTVDFNSRLSSVARPRGPFEIVSVLPVDEANSPTYRVKSKAEPFARAAKEIDLVAVGLPPSNQAEEPLWSDPVSGQWLPRPFRSR*
Ga0070714_1018436291	3300005435	Agricultural Soil	MTHKFVVGQAVDFNRKQPWMSGGPYEVVSVLPADGDDFPTYRVKSQTEPFARAAKEADLVAVGSAPVGRPTLVRWADLLSQPSAPTRSR*
Ga0070710_111892812	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTHKFAVGQAVGFNKKLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGSAAPPGEPAPVRWAD
Ga0070711_1005283382	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTHKFVVGQAVDFNKKFPWMSGGPYEVISVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGGLAPVGEPAPVRWADLLSQPPGPTRSR*
Ga0070711_1011724541	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMTFPKFVIGQTVDFNSRLSSVARPRGPFEIVSVLPVDEANSPTYRVKSKAEPFARAAKEIDLVAVGLPPSNQAEAPLWSDPVSGQWLPRPFRSR*
Ga0070735_102301952	3300005534	Surface Soil	MTLYKFVIGQAVDFNSKRPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR*
Ga0068853_1009574321	3300005539	Corn Rhizosphere	VLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0070763_100517842	3300005610	Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVSGRRSPRPLR*
Ga0068856_1005495421	3300005614	Corn Rhizosphere	MTHKFAVGQAVGFNKKLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGSAAPAGEPAPVRWADLLSQPTGPIRSR*
Ga0070764_101702041	3300005712	Soil	RPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVSGRRSPRPLR*
Ga0075029_1013121401	3300006052	Watersheds	MTLHKFLLGQTVDFDTKLPSMSRPRGPFEVVSVLPVDEANSPTYRVKCKTEPFARAVRESDLVAVGSPPSQQTAAALWAAPVSGRWLSRPFRSQ*
Ga0075017_1003521671	3300006059	Watersheds	MTSKFVVGQAVNFSKKYPWMSGGPYEVVSVLPPDRDDSTTYRVKSQVEPFARAANEADLIAVDLAPVGQTAPVGWADLLSQRSGPTRSR*
Ga0070712_1019811451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DFNSRLSSVARPRGPFEIVSVLPVDEANSPTYRVKSKAEPFARAAKEIDLVAVDLPPSNQAEAAVWGDPVSGQWLPRPFRSR*
Ga0070765_1012813082	3300006176	Soil	IGQTVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKAELFSRAAKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRPFRSR*
Ga0105240_100495429	3300009093	Corn Rhizosphere	MTLHKFVIGQAVDFDKRLPWMSGGPYEVVSVLPVDGGDSPAYRVKSTAEPFARAARETDLVAVGSAPSKEPTPVRWADLLSQRSDPFRSRR*
Ga0105240_102524333	3300009093	Corn Rhizosphere	MTLYKFVIGQAVDFNSKPPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR*
Ga0105240_107374251	3300009093	Corn Rhizosphere	MTHKFAVGQAVDFNKRLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGSAAPAGEPAPVRWADLLSQPTGPIRSR*
Ga0105237_105838593	3300009545	Corn Rhizosphere	MTHKFAVGQAVGFNKKLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAIGSAAPAGEPAPVRWADLLSQPTGPIRSR*
Ga0116129_10164065	3300009633	Peatland	MIAHKFVIGQAVDFDRRLTSMSRPSGPYEVVSVLPVDEGNSPTYRVKSKAEPFARAAKEADLIAVGLAPSKQTPATLWTDLVSGRRASPPVRSR*
Ga0123355_105915192	3300009826	Termite Gut	VVWRGTFLTRSDLKAREVVKIMTLHKFVVGQAVDFNRKLRWTSGGPYEVVSVLPVDEGDSPTYRVKSKAEPFARAAKETDLVAVGLAPSKQPERRSGPISWAQPSGPSRSR*
Ga0123356_102198231	3300010049	Termite Gut	MTLHKFVVGQAVDFNRKLRWMSGGPYEVVSVLPVDEGDSPTYRVKSKAEPFARAAKETDLVAVGLAPSKQPERRSGPISWAQPSGPSRSR*
Ga0134128_118068413	3300010373	Terrestrial Soil	YEVVSVLPVDGGDSPAYRVKSTAEPFARAARETDLVAVGSAPSKEPTPVRWADLLSQRSDPFRSRR*
Ga0126381_1010386312	3300010376	Tropical Forest Soil	MIAHKLAVGQAVDFNGGLPSMPRPRGPFQVVSVLPVDDGNFPTYRVKSNAEPFERAAKEIDLVAVGLPPSKETTAAPWAGPVPGRWLPRPFRSR*
Ga0136449_1038601262	3300010379	Peatlands Soil	MMTSKFVVGQAVNFSKKYPWMSGGPYEVVSVLPPDRDDSTTYRVKSQVEPFARAANEADLIAVDLAPVGQTAPVGWADLLSQRS
Ga0126350_122785112	3300010880	Boreal Forest Soil	MTPHKFVIGQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKAELFSRAAKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRSFRSR*
Ga0153951_10279791	3300011404	Attine Ant Fungus Gardens	MTFHKFMIGQVVDFDKKLPSMSRPQGPFEVVSVLPTGEDNSSSYRVKSKAEPFARVARETDLVAVGLPPSKQTAALWADPVSGRSLARPFRSR*
Ga0153954_10030556	3300011418	Attine Ant Fungus Gardens	MTHKFVVGQAVDFGRQLRSMSAGPYEVVSVPPVDGTDAPTYRVKSKTEPFTRVAKETELVAVGSAPSKDAVSTLWGDLVSGRGASPPLRTR*
Ga0153953_10131363	3300012154	Attine Ant Fungus Gardens	MTLHKFVIGQAVDFNRKLRWMSGGPYEVVSVLPVDGADSPTYRVKSKAEPFARAAKETDLVAVGLAPSEQSAPARWADILSQSSRPFRSR*
Ga0157370_102571391	3300013104	Corn Rhizosphere	PWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR*
Ga0157369_125304432	3300013105	Corn Rhizosphere	MTHKFAVGQAVDFNKRLPWMSGGPYEVVSVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGSPAPAGEPAPVRWADLLSQPTGPIRSR*
Ga0182041_106944752	3300016294	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPKRWLPGPFRSR
Ga0182038_101718003	3300016445	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETELVALGLPPSKQTAAALWADAVPERWLPRPFRSR
Ga0187776_105205082	3300017966	Tropical Peatland	MTLHKFVIGQAVDFDTRFPSMPRPTGPFEVVSALPIGEDNSPTYRVKSNAEPFARVARETDLVAIGLPPSKQTAPLWADLLSQPPGPFRSR
Ga0187781_104765882	3300017972	Tropical Peatland	MTLHKFVIGQAVDFNSRLPAVSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQTAAAQ
Ga0187781_106268501	3300017972	Tropical Peatland	MTLHKFVIGQAVDFNSRFPAMSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARVVKETDLVAVGLPPSKQTAAAQWANPVSGSGPPRPFRSR
Ga0187782_103256001	3300017975	Tropical Peatland	MTLHKFVIGQAVDFNSRLPAVSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARVVKETDLVAVGLPPSKQTAAAQWANPVSGSGPPRPFRSR
Ga0187822_100168934	3300017994	Freshwater Sediment	MTLYKFVIGQAVDFNSKRPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0187766_103394022	3300018058	Tropical Peatland	MTLHKFVIGQAVDFNSRLPAVSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARVAKETDLVAVGLPPSKQTAAALWADPVSGRSLPRPFRSR
Ga0187784_113227952	3300018062	Tropical Peatland	MTLHKFVIGQAVDFNSRLPAVSRPRGPFEVVSVLPVDEANSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQTAAALWADPVSGRSLPRPFRSR
Ga0066662_110375611	3300018468	Grasslands Soil	MALYKFVVGQTVGFNNKLPWMSGGPYEVVSVLPVDDGDSPTYRIKSKAEPFARAAKETDLVAVGSAPSEQATTVQWADLLPRRTGPSRSR
Ga0210407_108742692	3300020579	Soil	DFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKSELFSRAVKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRPFRSR
Ga0210395_100650342	3300020582	Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVSGRRSPRPLR
Ga0210395_109673031	3300020582	Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVELPPSQQAAAAVWADPLPGRWLPRPARSR
Ga0210405_103465222	3300021171	Soil	GQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKTELFSRAVKEIDLVAVDLPPSEQATAALWADPVSGRWLPRPFRSR
Ga0210388_105688241	3300021181	Soil	KMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKTELFSRAVKEIDLVAVELPASEQAAAAVWADPVSGRWLPRPSRSR
Ga0213877_102172512	3300021372	Bulk Soil	MTLHKFVIGQAVDFDRRFPSMSRPTGPFEVVSALPIGEDNFPTYRVKSDVEPFARVAKETDLVAIGLPPSKQTAPLWADLLSQPPPGPFRSR
Ga0210387_108691432	3300021405	Soil	DKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKTELFSRAVKEIDLVAVELPASEQAAAAVWADPVSGRWLPRPSRSR
Ga0210394_113313411	3300021420	Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVSGRRSPRPWR
Ga0210390_116560431	3300021474	Soil	MTLHKFVIGQVVDFDKKLPLMSRPPGPFEVVSVLPRGEDNSSSYRVKSKAEAFARVARETDLVAVGLVPSKQPTIVRWADLLSQPSEPFRSR
Ga0210398_106098651	3300021477	Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVDLPPNQQTAAALWADPVPGRWLPRPARSR
Ga0210410_106468781	3300021479	Soil	EFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKTELFSRAAKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRPFRSR
Ga0242664_10525972	3300022527	Soil	MTLHQFAIGQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKSELFSRAVKEIDLVAVDLPPSEQAAAAVWADPVSGRGLPRPFRSR
Ga0242669_10224901	3300022528	Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLVPSEQAPPALWADPVS
Ga0208193_10736902	3300025463	Peatland	MIAHKFVIGQAVDFDRRLTSMSRPSGPYEVVSVLPVDEGNSPTYRVKSKAEPFARAAKEADLIAVGLAPSKQTPATLWTDLVSGRRASPPVRSR
Ga0208356_10312072	3300025504	Arctic Peat Soil	MTLHKFVIGQAVDFDGKLPSMSRPKGPFEIVSVLPVEDASSLTYRVKSQAEPFSRAAKESDLVAVDMPPSQRTTAPLSADPVSGRWLPRPVRSR
Ga0208220_11492202	3300025627	Arctic Peat Soil	FVIGQAVDFDGKLPSMSRPRGPFEIVSVLPVEDASSLTYRVKSQAEPFSRAAKESDLVAVDTPPSQRTTAPLSADPVSRRWLPRPVRSR
Ga0208480_100090310	3300025633	Arctic Peat Soil	MTLHKFVLGQAVDFDGKLPSMSRPRGPFEIVSVLPVEDASSLTYRVKSQAEPFSRAAKESDLVAVDTPPSQRTTAPLSADPVSRRWLPRPVRSR
Ga0207695_1003726911	3300025913	Corn Rhizosphere	MTLHKFVIGQAVDFDKRLPWMSGGPYEVVSVLPVDGGDSPAYRVKSTAEPFARAARETDLVAVGSAPSKEPTPVRWADLLSQRSDPFR
Ga0207695_108032691	3300025913	Corn Rhizosphere	MTLYKFVIGQAVDFNSKPPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVR
Ga0207671_105699112	3300025914	Corn Rhizosphere	MTLYKFVIGQAVDFNSKPPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKETDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0207663_101876493	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTHKFVVGQAVDFNKKFPWMSGGPYEVISVLPVDGHDSPTYRVKSQAEPFARAAKEDDLVAVGGLAPVGEPAPVRWADLLSQPPGPTRSR
Ga0209732_10354971	3300027117	Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVMSVLPTDEADSPTYRVKSHAEPFARAARETDLVAIGLAPSQQAAPALWADPVSGRRSSRPLRSG
Ga0209732_10493092	3300027117	Forest Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVELPSSQQAAAAVWADPLPGRWLPRPARSR
Ga0209421_10389281	3300027432	Forest Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVDLPPSQQAAAAVWADPLPGRWLPRPARSR
Ga0208987_10375242	3300027496	Forest Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVLPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVELPPSQQAAAA
Ga0209248_101279752	3300027729	Bog Forest Soil	SQRGGQIMTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVDLAPSEQAPPALWADPVSGRRSPRPLR
Ga0209448_101624062	3300027783	Bog Forest Soil	MTLHKFVIGQAVDFDKMLPTISRPKGPFEIVSVLPVDDANSPTYRVKSKAELFSRAAKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRPFRSR
Ga0209139_100473093	3300027795	Bog Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLAPSEQAPPALWADPVSGRRSPRPLR
Ga0209006_100706783	3300027908	Forest Soil	MTLHKFMIGQAVDFDGKLSMSRPRGPFEIVSVLPVEDPSSLTYRVKSQAEPFSRAAKESDLVAVDMPPSQRTTEPLSADPVSGRWLPRPLRSR
Ga0209006_102489481	3300027908	Forest Soil	MTPKFVVGQPVDYNKKFPWMSDGPYEVVGVLPVDDDDAPTYRVKNQAEPFARAAREIDLVAVAEGSAQVGESRPLRWADLLSQPSKPTRSR
Ga0302232_103781501	3300028789	Palsa	MTPKFVVGQAVDFNKRYPWMSGGLYEVVGVLPVDDDASPTYRIKSQNEPFARAAREIDLVAVAVGSTQVGEPAPIRWADLLSKSSRPNRSR
Ga0311338_114442792	3300030007	Palsa	MTPKFVVGQAVDFNKRYPWMSGGLYEVVGVLPVDDDASPTYRIKSQNEPFARAAREIDLVAVAVGSTQVGEPAPIRWADLLSKSSRPNRS
Ga0073999_100108851	3300030839	Soil	MILHKFMIGQAVDFDGRLSMSRPKGPFEIVSVLPVEDASSLTYRVKSQAEPFSRAAKESDLVAVDTPPSERTTEPLSADPASGRWLPRPLRS
Ga0074031_19433821	3300030949	Soil	MSLHKFTIGQAVDFDKMLPTISRPKGPFEIVSVSPVEGGNSPTYRVKSQAELFLRVAKEIDLVAVELPPSQQAAAALWADPVPGRWLPRPA
Ga0170834_1053915581	3300031057	Forest Soil	AIGQAVDFDKMLPSISRPKGPFEIVSVLSVDDANSPTYRIKSKSELFSRAAKEIDLVAVDLPPSEQAAAAVWADPVSGRWLPRPFRSR
Ga0318560_102618752	3300031682	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPKRWLPRPFRSR
Ga0307476_100954824	3300031715	Hardwood Forest Soil	MTPHKFVIGQAVDFDRRFPSMSRPTGPFEVVSALPIGEDNSPTYRVKSNAEPFARVAREADLVAIGLPPSKQTAPLWADLLSQPPGPFRSR
Ga0307474_102388341	3300031718	Hardwood Forest Soil	MTRPKFTIGQVVDFARRLPSISRPTGPYEVVSVLPADEADSPTYRVKSKAEPFARAARETDLVAVGLAPSEQAPPALWADPVSGRRSPRPL
Ga0307474_103133893	3300031718	Hardwood Forest Soil	MTPHKFVIGQAVDFDRRFPSMSRPTGPFEVVSALPIGEDNSRTYRVKSNAEPFARVAREADLVAIGLPPSKQTAPLWADLLSQPPGPFRSR
Ga0306917_104920442	3300031719	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPGRWLPRPFRSR
Ga0306918_102404362	3300031744	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTTAALWADPVPGRWLPRPFRSR
Ga0318502_105857502	3300031747	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPERWLPRPFRSR
Ga0318546_107821102	3300031771	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVMSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADAVPERWLPRPFRSR
Ga0318543_100691011	3300031777	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAAPWASPVSGRWLPRPFRSR
Ga0318565_105382041	3300031799	Soil	MTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAAPWADPVSGRKLPFRSR
Ga0318565_106438121	3300031799	Soil	MTLRKFVIGQAVDFDRRFPSMSRPTGPFEVVSALPIGEDNSPTYRVKSNAEPFARVARETDLVAIGLPPSKQTAPVWADLLSQPPGPFRSR
Ga0307478_106833502	3300031823	Hardwood Forest Soil	MTHHKFTIGQAVDFARRLPSISRPAGPYEVVSVLPADEADSPTYRVKSKDEPFARAARETDLVAVGLAPSQQAAPGLWADPVSGRRSPRPLRSR
Ga0318564_101849061	3300031831	Soil	LERRPNSMTLHKFLIGQAVDFNSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPERWLPRPFRSR
Ga0318520_107311522	3300031897	Soil	SSMTLHKFLIGQAVDFNGRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADAVPERWLPRPFRSR
Ga0310912_107744912	3300031941	Soil	VDFSSRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPGRWLPRPFRSR
Ga0318558_105235282	3300032044	Soil	LHKFVIGQAVDFNSRLPSMPRRSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPGRWLPRPFRSR
Ga0318533_105045922	3300032059	Soil	MTLHKFVIGQAVDFDRRFPSMSRPTGPFEVVIALPIGEDNSPTYRVKSNAEPFARVARETDLVAIGLPPSKQTAPLWADLLSQPPGPFRSR
Ga0311301_125895771	3300032160	Peatlands Soil	MTSKFVVGQAVNFSKKYPWMSGGPYEVVSVLPPDRDDSTTYRVKSQVEPFARAANEADLIAVDLAPVGQTAPVGWADLLSQRS
Ga0348332_105858831	3300032515	Plant Litter	MTPKFVVGQPVDYNKKFPWMSDGPYEVVGVLPVDDDDAPTYRVKNQAEPFARAAREIDLVAVAEGSAQVGETRPLRWADLLSQPSKPTRSR
Ga0335079_110280781	3300032783	Soil	MTSKFSVGQAVDFNKKYPWMSGGPYEVVSVLPVDEHDSPTYRVKSKAEPFARSAKEADLVAVGLAPTEQSTPVRWADLLSGRRTSSRPPDRRP
Ga0335078_126032721	3300032805	Soil	LRQGGQTMAPYKFVIGQAVDFNSKLPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFTRAAKESDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0335070_104655322	3300032829	Soil	MTIHKFVIGQAVDFDRRFPSMSRPTGPFEVVSALPIGEDNSPTYRVKSDVEPFARVAKETDLVAIGLPLSKQAAPLWADLLSQPPPGPFRSR
Ga0335069_106430353	3300032893	Soil	VSALPIGEDNSSTYRVKSNAEPFARVARETDLIAIGLPPSKQTAPLWADPPSQPPGPFRS
Ga0335069_106576103	3300032893	Soil	MTLHKFVIGQTVDFDTRFPSMPRPTGPFEVVSALPIGEDNSPTYRVKSNAEPFARVARETDLVAIGLPPSKQTAPLWADLLSQRPGPFRSR
Ga0335074_100392416	3300032895	Soil	MALYKFVIGQAVDFNSKLPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKESDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0335074_102295725	3300032895	Soil	MTLYKFVIGQAVDFNSKPPWMSGGPYEVVSVLPVDDRDSPTYRIKSKAESFARAAKETELVAVGSAPSKQPAPVRWADLLSQRSGPFRSR
Ga0335074_107248371	3300032895	Soil	SVLPVDERDSPTYRIKSKAEPFARAAKESDLVAVGLPPSKQPAPVRWADLLPRPPGPFRS
Ga0335075_101428464	3300032896	Soil	MALYKFVIGQAVDFNSKLPWMSGGPYEVVSVLPVDERDSPTYRVKSKAEPFARAAKESDLVAVGLPSSKQPAPVRWVDLLPRPPGPFRSR
Ga0335075_102110472	3300032896	Soil	MALYKFVIGQAVDFNRRLPWMSGGPYEVMSVLPVDERDSPTYRIKSKAEPFARAAKESDLVAVGLPPSKQPAPVRWADLLPRPPGPFRSR
Ga0335072_109019052	3300032898	Soil	MTHKFVVGQAVDFNKRYPWMSGGPYEVVRVLPADKDDSPTYRVKSEAEPFARSAKEDDLVAIGSPTLGAPAPVRWADLLSRPSGPARSR
Ga0335073_1000932612	3300033134	Soil	MTLHKFVIGQAVDFDRRLPSMSRPMGPFEVVSVLPVGDDSSPTYRVKSKTEPFARAAREIDLVAVGLPPSKQTATGLWADPVSGQSLARPFRSR
Ga0335073_100284317	3300033134	Soil	MTLHKFMIGQVVDFDSKLPSISRPPGPFEVVSVLPTGEDNSSSYRVKSKAEPFTRVARETDLVAVGLPPSKETAALWADPVSARSLARPFRSRSRPR
Ga0335073_104415682	3300033134	Soil	MTLYKFVIGQAVEFNSKLSWMSGGPYEVVSVLPADECDSPTYRVKSKAEPFARAAKENDLVAVGLAPSKQPAPARWADLLPGAPGPFRSR
Ga0310914_106570451	3300033289	Soil	LIGQAVDFNRRLPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPERWLPRPFRSR
Ga0318519_109261272	3300033290	Soil	LPSMSRPSGPFEVVSVLPVDEANSPTYRVKSEAEPFARVAKETDLIALGLPPSKQTAAALWADPVPGRWLPRPFRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073829

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences